View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1726_high_7 (Length: 453)

Name: NF1726_high_7
Description: NF1726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1726_high_7
NF1726_high_7
[»] chr2 (40 HSPs)
chr2 (16-197)||(31129113-31129295)
chr2 (269-358)||(7646277-7646367)
chr2 (269-358)||(9169462-9169551)
chr2 (269-358)||(4778558-4778648)
chr2 (261-358)||(7678082-7678180)
chr2 (269-358)||(7448053-7448143)
chr2 (261-358)||(12677500-12677598)
chr2 (261-338)||(1421468-1421545)
chr2 (264-344)||(5428086-5428167)
chr2 (269-353)||(27097614-27097699)
chr2 (261-358)||(31788253-31788351)
chr2 (261-358)||(36943328-36943426)
chr2 (273-353)||(37876807-37876888)
chr2 (261-337)||(31128974-31129050)
chr2 (279-358)||(38444982-38445061)
chr2 (261-358)||(18763265-18763363)
chr2 (261-358)||(43397323-43397421)
chr2 (269-358)||(8809087-8809176)
chr2 (273-357)||(37994084-37994168)
chr2 (269-358)||(4098908-4098998)
chr2 (261-357)||(32448826-32448923)
chr2 (263-358)||(11985434-11985530)
chr2 (261-357)||(35220128-35220222)
chr2 (261-356)||(12648130-12648226)
chr2 (279-352)||(36175652-36175725)
chr2 (263-350)||(37416501-37416588)
chr2 (269-357)||(17994921-17995010)
chr2 (269-357)||(24461244-24461333)
chr2 (261-338)||(25509292-25509368)
chr2 (269-352)||(4904346-4904430)
chr2 (269-353)||(19029116-19029200)
chr2 (279-352)||(18107946-18108020)
chr2 (262-338)||(29279796-29279871)
chr2 (263-352)||(17149966-17150056)
chr2 (290-351)||(30400250-30400312)
chr2 (278-358)||(10237417-10237498)
chr2 (261-350)||(28718160-28718248)
chr2 (261-329)||(36691663-36691732)
chr2 (262-310)||(4042230-4042278)
chr2 (286-358)||(29173926-29173997)
[»] chr3 (53 HSPs)
chr3 (269-358)||(21431420-21431509)
chr3 (269-358)||(9998261-9998352)
chr3 (269-356)||(48650941-48651029)
chr3 (269-358)||(10232865-10232955)
chr3 (261-358)||(47895938-47896036)
chr3 (269-358)||(10108033-10108121)
chr3 (261-350)||(35865146-35865235)
chr3 (261-338)||(45568669-45568746)
chr3 (261-351)||(40487112-40487203)
chr3 (269-358)||(52923320-52923409)
chr3 (269-356)||(40556506-40556594)
chr3 (269-358)||(6954900-6954990)
chr3 (269-358)||(32701293-32701383)
chr3 (269-358)||(47042256-47042346)
chr3 (261-358)||(21534014-21534110)
chr3 (261-361)||(38545622-38545723)
chr3 (261-356)||(43016642-43016740)
chr3 (261-358)||(33579655-33579753)
chr3 (279-358)||(54148793-54148873)
chr3 (261-358)||(9797734-9797829)
chr3 (269-358)||(10229269-10229361)
chr3 (279-358)||(36461635-36461715)
chr3 (264-358)||(12050852-12050947)
chr3 (261-350)||(629118-629208)
chr3 (261-319)||(31272051-31272109)
chr3 (261-357)||(50194488-50194585)
chr3 (261-358)||(43488794-43488899)
chr3 (261-329)||(53808096-53808164)
chr3 (263-338)||(7449127-7449201)
chr3 (263-338)||(7457269-7457343)
chr3 (262-357)||(20465173-20465267)
chr3 (262-356)||(26275999-26276094)
chr3 (271-329)||(42456300-42456358)
chr3 (261-338)||(953632-953709)
chr3 (261-357)||(7546397-7546494)
chr3 (269-353)||(9319858-9319937)
chr3 (261-317)||(9688480-9688536)
chr3 (278-351)||(29921856-29921931)
chr3 (278-351)||(29971009-29971084)
chr3 (261-358)||(12149986-12150084)
chr3 (261-357)||(21290024-21290121)
chr3 (279-348)||(23800123-23800195)
chr3 (290-357)||(4821623-4821691)
chr3 (278-357)||(8914508-8914588)
chr3 (291-358)||(20609101-20609169)
chr3 (261-351)||(29249030-29249122)
chr3 (278-353)||(51303847-51303923)
chr3 (309-350)||(42460581-42460623)
chr3 (275-355)||(4396535-4396614)
chr3 (261-338)||(36910880-36910957)
chr3 (276-348)||(46220480-46220553)
chr3 (156-196)||(35846520-35846560)
chr3 (321-353)||(53508069-53508101)
[»] chr8 (33 HSPs)
chr8 (261-358)||(31013773-31013871)
chr8 (261-358)||(17693816-17693913)
chr8 (262-358)||(7677482-7677579)
chr8 (269-338)||(10377494-10377563)
chr8 (264-358)||(23230436-23230530)
chr8 (261-358)||(25191268-25191366)
chr8 (263-358)||(37971086-37971179)
chr8 (269-358)||(3673243-3673332)
chr8 (261-358)||(7883443-7883540)
chr8 (262-358)||(29937905-29938001)
chr8 (261-355)||(8980986-8981081)
chr8 (261-351)||(27110673-27110764)
chr8 (261-357)||(1239606-1239703)
chr8 (261-338)||(8412572-8412649)
chr8 (261-357)||(15344095-15344192)
chr8 (261-357)||(15433160-15433257)
chr8 (261-357)||(15524464-15524561)
chr8 (261-338)||(45446034-45446111)
chr8 (261-358)||(40211507-40211606)
chr8 (264-358)||(20559946-20560041)
chr8 (264-358)||(20571508-20571603)
chr8 (261-357)||(1236896-1236993)
chr8 (261-357)||(24099465-24099560)
chr8 (262-338)||(33214854-33214930)
chr8 (264-354)||(20553451-20553542)
chr8 (263-358)||(28897502-28897598)
chr8 (290-358)||(40619274-40619342)
chr8 (310-353)||(14916344-14916387)
chr8 (261-361)||(41684222-41684323)
chr8 (261-331)||(27498565-27498635)
chr8 (273-338)||(8443744-8443808)
chr8 (264-301)||(24186921-24186958)
chr8 (261-353)||(29617664-29617757)
[»] chr4 (44 HSPs)
chr4 (261-358)||(2520584-2520682)
chr4 (261-358)||(13633921-13634018)
chr4 (269-358)||(19853716-19853805)
chr4 (269-358)||(22610999-22611088)
chr4 (261-358)||(21686445-21686542)
chr4 (269-358)||(4142958-4143048)
chr4 (269-358)||(53810843-53810933)
chr4 (261-355)||(26633877-26633972)
chr4 (261-358)||(48257653-48257751)
chr4 (261-353)||(10496149-10496242)
chr4 (261-358)||(53443933-53444030)
chr4 (264-358)||(22558669-22558764)
chr4 (264-355)||(22300655-22300747)
chr4 (262-358)||(9165246-9165344)
chr4 (267-358)||(10259099-10259190)
chr4 (261-358)||(26091117-26091215)
chr4 (263-358)||(29961133-29961229)
chr4 (261-357)||(36204586-36204682)
chr4 (269-358)||(35348121-35348211)
chr4 (269-358)||(43510014-43510104)
chr4 (262-358)||(9178165-9178262)
chr4 (261-351)||(47320612-47320703)
chr4 (263-334)||(56156782-56156853)
chr4 (279-358)||(24099274-24099355)
chr4 (286-351)||(29121889-29121954)
chr4 (261-358)||(54021668-54021766)
chr4 (264-358)||(45418339-45418431)
chr4 (261-358)||(5119145-5119244)
chr4 (269-358)||(32766328-32766419)
chr4 (261-312)||(51024712-51024763)
chr4 (263-338)||(51888441-51888516)
chr4 (268-338)||(43126693-43126763)
chr4 (261-353)||(18935594-18935687)
chr4 (261-338)||(33920859-33920936)
chr4 (261-351)||(9643184-9643276)
chr4 (294-358)||(56040849-56040915)
chr4 (273-346)||(21662304-21662377)
chr4 (273-346)||(21671068-21671141)
chr4 (306-351)||(52978676-52978721)
chr4 (278-353)||(27651772-27651848)
chr4 (279-357)||(51535082-51535160)
chr4 (261-338)||(9713708-9713785)
chr4 (275-355)||(18048712-18048791)
chr4 (290-350)||(2069789-2069849)
[»] chr6 (25 HSPs)
chr6 (269-354)||(68209-68294)
chr6 (261-358)||(12170283-12170381)
chr6 (269-358)||(33053372-33053462)
chr6 (261-356)||(3913780-3913875)
chr6 (269-358)||(23128414-23128504)
chr6 (261-355)||(32328790-32328885)
chr6 (272-358)||(29320066-29320153)
chr6 (269-358)||(606000-606090)
chr6 (263-358)||(30894427-30894522)
chr6 (284-358)||(34018371-34018446)
chr6 (272-358)||(7515405-7515493)
chr6 (269-338)||(9723603-9723673)
chr6 (261-358)||(127465-127560)
chr6 (261-358)||(30608717-30608814)
chr6 (262-319)||(9719635-9719693)
chr6 (261-311)||(9721762-9721812)
chr6 (261-350)||(29255654-29255744)
chr6 (275-351)||(7976376-7976452)
chr6 (261-357)||(4010705-4010802)
chr6 (278-357)||(14801624-14801704)
chr6 (261-350)||(32059697-32059787)
chr6 (284-338)||(32191957-32192011)
chr6 (290-351)||(545842-545903)
chr6 (269-338)||(24227937-24228006)
chr6 (261-353)||(30493322-30493414)
[»] chr5 (27 HSPs)
chr5 (261-358)||(38597584-38597682)
chr5 (269-358)||(13007023-13007113)
chr5 (261-358)||(31391961-31392059)
chr5 (269-358)||(6012342-6012432)
chr5 (261-358)||(38007144-38007242)
chr5 (269-358)||(34945216-34945306)
chr5 (261-358)||(26878283-26878380)
chr5 (261-351)||(7036014-7036105)
chr5 (273-359)||(8096700-8096786)
chr5 (269-358)||(9113929-9114019)
chr5 (269-338)||(25979952-25980021)
chr5 (264-350)||(11074112-11074199)
chr5 (269-358)||(26825223-26825315)
chr5 (264-358)||(35850574-35850668)
chr5 (261-329)||(11977171-11977239)
chr5 (276-350)||(6216696-6216771)
chr5 (261-355)||(7929985-7930076)
chr5 (261-338)||(15571272-15571349)
chr5 (261-358)||(24229988-24230089)
chr5 (264-329)||(4770927-4770992)
chr5 (261-357)||(14211020-14211116)
chr5 (283-357)||(2979517-2979592)
chr5 (261-357)||(39567082-39567179)
chr5 (261-351)||(41630297-41630382)
chr5 (323-358)||(11867529-11867564)
chr5 (279-338)||(14082596-14082655)
chr5 (261-344)||(28541124-28541208)
[»] scaffold0445 (1 HSPs)
scaffold0445 (269-358)||(1139-1229)
[»] scaffold0127 (1 HSPs)
scaffold0127 (261-358)||(15279-15377)
[»] chr7 (35 HSPs)
chr7 (261-358)||(9450341-9450439)
chr7 (261-358)||(42978397-42978495)
chr7 (261-358)||(47590103-47590200)
chr7 (263-358)||(37837662-37837758)
chr7 (264-358)||(12141512-12141607)
chr7 (261-358)||(13797135-13797233)
chr7 (269-358)||(30757023-30757113)
chr7 (269-358)||(48317016-48317106)
chr7 (261-358)||(8013669-8013767)
chr7 (269-358)||(19296675-19296765)
chr7 (261-358)||(19404958-19405056)
chr7 (261-358)||(39171796-39171894)
chr7 (264-354)||(48061214-48061305)
chr7 (269-358)||(34899811-34899898)
chr7 (269-358)||(40992979-40993068)
chr7 (267-338)||(9915939-9916010)
chr7 (267-338)||(9923851-9923922)
chr7 (278-351)||(22087123-22087197)
chr7 (272-337)||(24770055-24770120)
chr7 (278-358)||(35132757-35132838)
chr7 (269-358)||(38798587-38798674)
chr7 (261-319)||(45350436-45350494)
chr7 (279-352)||(49149041-49149114)
chr7 (261-338)||(39329018-39329095)
chr7 (278-353)||(1749350-1749426)
chr7 (279-357)||(22742745-22742824)
chr7 (261-338)||(3224642-3224719)
chr7 (261-338)||(4529868-4529945)
chr7 (261-357)||(5078598-5078695)
chr7 (261-355)||(24351050-24351145)
chr7 (261-328)||(25287416-25287483)
chr7 (306-353)||(26610952-26610998)
chr7 (295-341)||(38880800-38880846)
chr7 (269-356)||(5348790-5348877)
chr7 (279-354)||(28476030-28476106)
[»] chr1 (41 HSPs)
chr1 (264-358)||(29738840-29738935)
chr1 (261-338)||(35484603-35484680)
chr1 (261-351)||(34878482-34878573)
chr1 (269-336)||(41176980-41177047)
chr1 (269-358)||(7337867-7337957)
chr1 (262-357)||(49626701-49626797)
chr1 (265-358)||(3228064-3228158)
chr1 (261-358)||(45415349-45415447)
chr1 (276-351)||(5983641-5983717)
chr1 (270-356)||(7836972-7837059)
chr1 (264-358)||(10776664-10776759)
chr1 (261-358)||(31983970-31984068)
chr1 (261-338)||(21686663-21686740)
chr1 (261-357)||(45789355-45789452)
chr1 (261-353)||(940155-940247)
chr1 (261-358)||(27456330-27456429)
chr1 (261-351)||(51916863-51916954)
chr1 (264-357)||(11462653-11462747)
chr1 (261-338)||(44915435-44915513)
chr1 (261-357)||(1742071-1742168)
chr1 (261-338)||(18939112-18939189)
chr1 (291-338)||(32394819-32394866)
chr1 (287-357)||(50377144-50377214)
chr1 (261-350)||(44543063-44543153)
chr1 (261-350)||(21947831-21947919)
chr1 (263-358)||(15435076-15435172)
chr1 (261-355)||(43412162-43412255)
chr1 (261-358)||(14872429-14872527)
chr1 (261-331)||(26535190-26535260)
chr1 (261-338)||(32679324-32679401)
chr1 (269-338)||(35462263-35462332)
chr1 (269-358)||(36894445-36894532)
chr1 (264-335)||(4413097-4413168)
chr1 (261-355)||(12634957-12635052)
chr1 (283-356)||(23291848-23291925)
chr1 (270-352)||(31317550-31317633)
chr1 (261-358)||(27580332-27580428)
chr1 (279-357)||(16161640-16161719)
chr1 (279-352)||(15836001-15836075)
chr1 (290-350)||(15492113-15492173)
chr1 (264-328)||(31918772-31918836)
[»] scaffold0026 (1 HSPs)
scaffold0026 (269-352)||(72074-72158)
[»] scaffold0884 (1 HSPs)
scaffold0884 (264-358)||(2176-2271)
[»] scaffold0088 (1 HSPs)
scaffold0088 (269-358)||(50581-50671)
[»] scaffold0017 (1 HSPs)
scaffold0017 (261-358)||(32952-33050)
[»] scaffold0009 (1 HSPs)
scaffold0009 (261-357)||(58284-58381)
[»] scaffold0064 (1 HSPs)
scaffold0064 (261-357)||(19242-19337)
[»] scaffold0603 (1 HSPs)
scaffold0603 (278-351)||(7521-7595)
[»] scaffold0554 (1 HSPs)
scaffold0554 (269-358)||(10674-10762)
[»] scaffold0087 (1 HSPs)
scaffold0087 (261-358)||(25533-25631)
[»] scaffold0219 (1 HSPs)
scaffold0219 (261-358)||(15042-15140)
[»] scaffold0049 (1 HSPs)
scaffold0049 (296-358)||(71487-71549)
[»] scaffold0262 (1 HSPs)
scaffold0262 (261-351)||(2029-2119)
[»] scaffold0121 (1 HSPs)
scaffold0121 (267-358)||(31474-31567)
[»] scaffold0634 (1 HSPs)
scaffold0634 (261-358)||(8301-8399)
[»] scaffold0136 (1 HSPs)
scaffold0136 (295-351)||(10251-10307)
[»] scaffold0492 (1 HSPs)
scaffold0492 (279-352)||(12721-12795)


Alignment Details
Target: chr2 (Bit Score: 131; Significance: 9e-68; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 31129295 - 31129113
Alignment:
Q  16 cacaagttagatgtttaccggagaaaattcttataacaatgtgannnnnnnnc-tttgaaaattatttagggtaagactcactcatttaagtgcaggaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||||||||||||||||    
T  31129295 cacaagttagatgtttaccggagaaaattcttataacaatgtgattttttttcctttgaaaattatttagggtaagactcactcatttaagtgcaggaaa 31129196  T
Q  115 gagaaaaattacggattcaaacttggatttaaaattttaaaggtcttgctatcttgtgcatttagggcacaagtgaaggaata 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| |||| |||||||||||||    
T  31129195 gagaaaaattacggattcaaacttggatttaaaattttaaagtttttgctatcttgtgcacttaaggcataagtgaaggaata 31129113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 7646277 - 7646367
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  7646277 aaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 7646367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 9169551 - 9169462
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  9169551 aaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtcatttttgacctagaatcacccctcta 9169462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 4778558 - 4778648
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  4778558 aaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 4778648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 7678180 - 7678082
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||| |||||||||||||    
T  7678180 agtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctcta 7678082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 7448053 - 7448143
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  7448053 aaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaatcacccctcta 7448143  T

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Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 12677598 - 12677500
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| | |||| ||||||| |||||||||| |||||||||||||    
T  12677598 agtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgacctagaatcacccctcta 12677500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 1421468 - 1421545
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1421468 agtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttt 1421545  T

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Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 5428167 - 5428086
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttagg-tcatttttgaccta 344  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  5428167 gagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgaccta 5428086  T

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Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 353
Target Start/End: Complemental strand, 27097699 - 27097614
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcaccc 353  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||||||    
T  27097699 aaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcaccc 27097614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 31788253 - 31788351
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||| |  |||||||||| | ||||||||||| |||||||||||||    
T  31788253 agtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaatcacccctcta 31788351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 36943426 - 36943328
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||| || |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||| |||||    
T  36943426 agtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaatcaccactcta 36943328  T

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Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 273 - 353
Target Start/End: Complemental strand, 37876888 - 37876807
Alignment:
Q  273 tccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcaccc 353  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  37876888 tccaacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaatcaccc 37876807  T

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Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 31129050 - 31128974
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttt 337  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||    
T  31129050 agtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggaggggtgattttaggtcatttt 31128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 358
Target Start/End: Original strand, 38444982 - 38445061
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||| ||| |||||||||||||    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtcatttttgatctagaatcacccctcta 38445061  T

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Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 18763265 - 18763363
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||| | |||||||||| | |||||||| |||| ||||||||||| |||||||||||||    
T  18763265 agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctcta 18763363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 43397421 - 43397323
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||||||||||||| |||| ||||||| | |||||||||||||| |||| |||||||||||||| |||||||||| ||||||| |||||    
T  43397421 agtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgacctagaatcacctctcta 43397323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 8809087 - 8809176
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    |||||| |||||||||||||| |||||||||||||| | | |||||||  | ||||||||| ||||||||||||||||||||||||||||    
T  8809087 aaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatcatttttgacctaaaatcacccctcta 8809176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 273 - 357
Target Start/End: Original strand, 37994084 - 37994168
Alignment:
Q  273 tccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctct 357  Q
    |||||||||||||||  ||||||||||| |||  |||||||||| || |||||||||||||||||||||||| ||||||||||||    
T  37994084 tccaacttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtcatttttgacctagaatcacccctct 37994168  T

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Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 4098908 - 4098998
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||| || ||| ||||||||| ||||||||||| |||||||| ||||    
T  4098908 aaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaatcacccatcta 4098998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 32448923 - 32448826
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatcacccctct 357  Q
    ||||||| |||||| ||||||||| ||||||||  || || |||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  32448923 agtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcacccctct 32448826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 263 - 358
Target Start/End: Complemental strand, 11985530 - 11985434
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||| ||||||||||||||||||||| |||||||||| ||| ||| |||||||| | |||||||| |||| ||||| ||||| |||||||||||||    
T  11985530 tgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaatcacccctcta 11985434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 35220128 - 35220222
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctct 357  Q
    ||||||| |||||||||| |||||||||| |||||||||||||| ||||||   ||||| ||||||||||| | ||||||||||| ||||||||||||    
T  35220128 agtgagagaaactccaacctctctctaaactttctttctccttcattcatc---gaggggtggttttaggttattttttgacctagaatcacccctct 35220222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 12648226 - 12648130
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctc 356  Q
    ||||||| |||||||||||||||| ||| ||||||||||| ||   || | |||||||| ||||||||||||| ||||||||||| |||||||||||    
T  12648226 agtgagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcattttttgacctagaatcacccctc 12648130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 36175725 - 36175652
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacc 352  Q
    |||||||||| ||||||||||||||| |||||| || || | |||||||||||||||||||||| | |||||||    
T  36175725 ttctctctaagttttctttctccttcattcatcaagaagaggtggttttaggtcatttttgaccgataatcacc 36175652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 350
Target Start/End: Original strand, 37416501 - 37416588
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatca 350  Q
    ||||| ||||| ||||||||||||||||||| ||| || ||| ||| |||| ||||| || |||||||||||||||| |||| |||||    
T  37416501 tgagagaaacttcaacttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtcatttttgtcctagaatca 37416588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 357
Target Start/End: Complemental strand, 17995010 - 17994921
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctct 357  Q
    ||||| || |||||||||||| |||||||||| |||| || |||| ||| | |||||||||||||| ||||| |||||||||||| ||||    
T  17995010 aaacttcatcttctctctaaactttctttctcattcggtcgtcgaagagaggtggttttaggtcattttttgccctaaaatcacctctct 17994921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 357
Target Start/End: Original strand, 24461244 - 24461333
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctct 357  Q
    |||||||||||||||||||| ||||  ||||| |||  ||||  ||||||| ||||||||||||| ||||||||||| |||||| |||||    
T  24461244 aaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaatcactcctct 24461333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 25509368 - 25509292
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    |||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||||||  | |||||||||||| |||||    
T  25509368 agtgagaaaaactcaaacttttctctaacttt-ctttcttcttcgttcatcgaggaatggtggttttaggtctttttt 25509292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 352
Target Start/End: Complemental strand, 4904430 - 4904346
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacc 352  Q
    ||||| ||||||||||||||| |||||||||| |||||| || || ||| | |||||||| |||| ||||||||||| |||||||    
T  4904430 aaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttgacctataatcacc 4904346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 353
Target Start/End: Complemental strand, 19029200 - 19029116
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcaccc 353  Q
    |||||| || ||||||||||  ||| |||||| |||||||||||| || || ||||||| | |||||||||||||| ||||||||    
T  19029200 aaactctaatttctctctaagctttttttctctttcgttcatcgaagatgggtggttttggatcatttttgacctagaatcaccc 19029116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 18108020 - 18107946
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacc 352  Q
    |||||||||| ||||||||||| ||| ||||| |||||  | |||||||||||||| |||||||||| |||||||    
T  18108020 ttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaatcacc 18107946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 29279871 - 29279796
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    |||||| ||||||||||||||||||||  ||||||||| |||| ||||||||||| |   | |||||||||||||||    
T  29279871 gtgagagaaactccaacttctctctaacctttctttct-cttcattcatcgaggatgagcgattttaggtcattttt 29279796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 352
Target Start/End: Original strand, 17149966 - 17150056
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacc 352  Q
    ||||| ||||| || ||||||||||| |||| |||||||||| ||||||||| || |||  |||||  ||| ||||||||||| |||||||    
T  17149966 tgagagaaacttcaccttctctctaagttttatttctccttcattcatcgagaagagattattttaattcattttttgacctagaatcacc 17150056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 351
Target Start/End: Complemental strand, 30400312 - 30400250
Alignment:
Q  290 ttttctttctccttcgttcatcgaggagggatggttttaggtcattttt-gacctaaaatcac 351  Q
    |||| |||||||||| ||||||||| || | ||||||||| |||||||| |||||||||||||    
T  30400312 ttttttttctccttcattcatcgagaagaggtggttttagatcattttttgacctaaaatcac 30400250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 358
Target Start/End: Complemental strand, 10237498 - 10237417
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||| ||||||| ||| |||  |||||||| || | || |||||||||| ||||||||||| |||||||||||||    
T  10237498 cttctctttaagttttcttcctctttcactcatcgagtagaggtgattttaggtcaatttttgacctagaatcacccctcta 10237417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 28718248 - 28718160
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatca 350  Q
    ||||||| ||||||||||| |||| ||| |||||||| || ||   |||| ||| |||| ||||||||||||||||||||| || |||||    
T  28718248 agtgagagaaactccaact-ctctttaagttttctttatctttaactcattgagaaggggtggttttaggtcatttttgacatagaatca 28718160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 36691663 - 36691732
Alignment:
Q  261 agtgagaaaaactccaactt-ctctctaaattttctttctccttcgttcatcgaggagggatggttttag 329  Q
    ||||||| |||||||||||| || ||||||  ||||||||||||| || || |||||||| |||||||||    
T  36691663 agtgagagaaactccaactttctttctaaaccttctttctccttccttaattgaggaggggtggttttag 36691732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 4042278 - 4042230
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcat 310  Q
    |||||| ||||||||||||||||||||| ||| |||||| ||| |||||    
T  4042278 gtgagagaaactccaacttctctctaaactttttttctcattccttcat 4042230  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 29173997 - 29173926
Alignment:
Q  286 taaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    |||||||| ||||||||||  |||||||  | ||||||||||||||  ||||||||||||||||  |||||||    
T  29173997 taaattttttttctccttcactcatcgacaaaggatggttttaggt-ttttttgacctaaaatcgtccctcta 29173926  T

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Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 21431420 - 21431509
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21431420 aaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttgacctaaaatcacccctcta 21431509  T

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Target: chr3; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 9998261 - 9998352
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca--tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||    
T  9998261 aaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctagaatcacccctcta 9998352  T

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Target: chr3; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 269 - 356
Target Start/End: Complemental strand, 48651029 - 48650941
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctc 356  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  48651029 aaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctaaaatcacccctc 48650941  T

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Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 10232865 - 10232955
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  10232865 aaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaatcacccctcta 10232955  T

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Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 47895938 - 47896036
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||| |||||||||||||    
T  47895938 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaatcacccctcta 47896036  T

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Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 10108033 - 10108121
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  10108033 aaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtca-ttttgacctagaatcacccctcta 10108121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 35865235 - 35865146
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatca 350  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  35865235 agtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtcatttttgatctaaaatca 35865146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 45568746 - 45568669
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45568746 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttt 45568669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 40487112 - 40487203
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcac 351  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||||||||| ||||||    
T  40487112 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcac 40487203  T

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Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 52923409 - 52923320
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||| | | |||||| ||||||||||||||| |||||||||||||    
T  52923409 aaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtcatttttgacctagaatcacccctcta 52923320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 269 - 356
Target Start/End: Original strand, 40556506 - 40556594
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctc 356  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  40556506 aaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctc 40556594  T

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Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 6954990 - 6954900
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||| || ||||||||||| |||||||||| |||||||||||||    
T  6954990 aaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgacctagaatcacccctcta 6954900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 32701293 - 32701383
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||| |||||||    
T  32701293 aaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacctagaatcatccctcta 32701383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 47042346 - 47042256
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||||||||    
T  47042346 aaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctataatcacccctcta 47042256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 21534110 - 21534014
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||| || ||||||||||| ||||||||||||||||| |||||||| || |||||||||||| ||||||||||| |||||||||||||    
T  21534110 agtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc-tttttgacctagaatcacccctcta 21534014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 361
Target Start/End: Original strand, 38545622 - 38545723
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctctat 359  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||| ||||||||||| |||||  |||||||    
T  38545622 agtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatcattcctctat 38545721  T
Q  360 at 361  Q
    ||    
T  38545722 at 38545723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 43016642 - 43016740
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca---tttttgacctaaaatcacccctc 356  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||    |||||||||| |||||||||||    
T  43016642 agtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtcagttcttttgacctagaatcacccctc 43016740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 33579655 - 33579753
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||| || || |||||||| |||| ||||||||||| |||||||||||||    
T  33579655 agtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcacccctcta 33579753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 358
Target Start/End: Original strand, 54148793 - 54148873
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  54148793 ttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctacaatcacccctcta 54148873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 9797829 - 9797734
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||| || ||||  ||||||||||||| ||||||||||| |||||||||||||    
T  9797829 agtgagagaaactccaacttctctctaaactttatttctccttcgttcattga-gagg--tggttttaggtcattttttgacctagaatcacccctcta 9797734  T

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Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 10229269 - 10229361
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt---gacctaaaatcacccctcta 358  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||||   |||||| ||||||| |||||    
T  10229269 aaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactcta 10229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 36461715 - 36461635
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||||||| |||||||||||||||||||||||||| |  |||||||||||||| |||||||||| | |||||||||||    
T  36461715 ttctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttgacctatattcacccctcta 36461635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 12050947 - 12050852
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||| |  |||||||| || | |||||||  || |||||||||||||    
T  12050947 gagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttattttttgatttagaatcacccctcta 12050852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 629208 - 629118
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatca 350  Q
    ||||||| |||||| ||||||||||||| ||||| ||| | |||  ||||||||||||| ||||||||||||||| |||||||||||||||    
T  629208 agtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatca 629118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 31272109 - 31272051
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggg 319  Q
    ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  31272109 agtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggaggg 31272051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 50194585 - 50194488
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctct 357  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||  || ||||| |||  ||||||||| ||| ||||||||||||||||||| ||||    
T  50194585 agtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttgacctaaaatcacctctct 50194488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 43488899 - 43488794
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatc--------gaggagggatggttttaggtcatttttgacctaaaatcacc 352  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||| ||||||        |||| ||| ||| |||||||| ||||||||||| |||||||    
T  43488899 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgggggggggagggggggtgggtttaggtcttttttgacctagaatcacc 43488800  T
Q  353 cctcta 358  Q
    ||||||    
T  43488799 cctcta 43488794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 53808164 - 53808096
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttag 329  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||| ||||||||||||| || ||||||    
T  53808164 agtgagagaaactccaacttctctctaagttttccttctctttcgctcatcgaggaggggtgattttag 53808096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 7449201 - 7449127
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||| ||||||||||||||||| || |||| |||||| |||||||||  ||||||| ||||||||||||||||||    
T  7449201 tgagagaaactccaacttctctcaaactttt-tttctctttcgttcattaaggagggctggttttaggtcattttt 7449127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 7457343 - 7457269
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||| ||||||||||||||||| || |||| |||||| |||||||||  ||||||| ||||||||||||||||||    
T  7457343 tgagagaaactccaacttctctcaaactttt-tttctctttcgttcattaaggagggctggttttaggtcattttt 7457269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 357
Target Start/End: Complemental strand, 20465267 - 20465173
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctct 357  Q
    |||||| ||||| |||||||  | ||||||| ||||||||||| |||||| || |||| |||||||| |||||||||||| || ||||||||||||    
T  20465267 gtgagagaaacttcaacttccttttaaattt-ctttctccttcattcatcaagtaggggtggttttatgtcatttttgacatagaatcacccctct 20465173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 26276094 - 26275999
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctc 356  Q
    |||||| |||||| || |||||| |||| |||||||||||||  ||||| |||||| | ||||||||||| | ||||||||||||||||| |||||    
T  26276094 gtgagagaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggtaattttttgacctaaaatcaaccctc 26275999  T

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Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 42456358 - 42456300
Alignment:
Q  271 actccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttag 329  Q
    ||||||| || | ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  42456358 actccaatttttttctaaattttctttctcattcattcatcgaggagggatggttttag 42456300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 953709 - 953632
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||||||||  |||||||||| ||||||||||||||| ||||| ||||||   |||||||||||| |||||    
T  953709 agtgagagaaactccacattctctctaagttttctttctccttcattcattgaggagaagtggttttaggtctttttt 953632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 7546397 - 7546494
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctct 357  Q
    ||||||| ||| || | ||||||||||| |||||||||||  ||  ||||||||||||| || ||||||||| |||||||| ||| ||||||||||||    
T  7546397 agtgagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaatcacccctct 7546494  T

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Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 353
Target Start/End: Original strand, 9319858 - 9319937
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcaccc 353  Q
    |||||| |||||||||||||||||||     |||||||||||||||||||  ||||||||| | ||||||||| || ||||||||    
T  9319858 aaactctaacttctctctaaattttc-----ccttcgttcatcgaggaggagtggttttagattatttttgacatataatcaccc 9319937  T

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Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 9688536 - 9688480
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggag 317  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||| |||| |||||||    
T  9688536 agtgagagaaacttcaacttctctctaaattttctttcttcttcattcagcgaggag 9688480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 29921856 - 29921931
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatgg-ttttaggtca-tttttgacctaaaatcac 351  Q
    ||||||||||| ||||||||||| ||| ||| |||||||||| ||| |||||||||| ||||||| ||||||||||    
T  29921856 cttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcac 29921931  T

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Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 29971009 - 29971084
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatgg-ttttaggtca-tttttgacctaaaatcac 351  Q
    ||||||||||| ||||||||||| ||| ||| |||||||||| ||| |||||||||| ||||||| ||||||||||    
T  29971009 cttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcac 29971084  T

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Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 12150084 - 12149986
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| | ||| |||||||||| |||| ||||||||   |  ||||||||||||||| |||||||| || | ||||||||||| |||||||||||||    
T  12150084 agtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccctcta 12149986  T

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Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 21290121 - 21290024
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctct 357  Q
    ||||||| ||||||   ||||||||||| ||||||| ||| |||  |||| |||||| | || ||||||||| |||||||||||| ||||||||||||    
T  21290121 agtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgacctagaatcacccctct 21290024  T

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Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 23800195 - 23800123
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgagga--gggatggttttaggtca-tttttgacctaaaat 348  Q
    ||||||||||||||| |||||||||| |||||||| ||  ||| ||||||||||| | |||||||||||||||    
T  23800195 ttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttgacctaaaat 23800123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 357
Target Start/End: Original strand, 4821623 - 4821691
Alignment:
Q  290 ttttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctct 357  Q
    ||||||||||| ||| ||| ||||| |||| ||||||||||||| ||||||||||| |||||| |||||    
T  4821623 ttttctttctctttcattcgtcgagaaggggtggttttaggtcattttttgacctataatcactcctct 4821691  T

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Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 357
Target Start/End: Original strand, 8914508 - 8914588
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctct 357  Q
    ||||||||||| ||||||| ||| |||  |||||||| |||| || ||||||||| |||||||||||| ||| ||||||||    
T  8914508 cttctctctaagttttcttcctctttcactcatcgagaaggggtgattttaggtcaatttttgacctagaataacccctct 8914588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 20609169 - 20609101
Alignment:
Q  291 tttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||||||||| ||| |||||||||| || ||||| || | ||||||||||||||||| |||||||    
T  20609169 tttctttctccttcattcgtcgaggaggggtgattttaagttattttttgacctaaaatcaaccctcta 20609101  T

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Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 29249030 - 29249122
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttt-taggtca-tttttgacctaaaatcac 351  Q
    ||||||| |||||| ||||||||| ||| |||||||||||||||  |||||||| || |||| |||  |||||| ||||||||||| ||||||    
T  29249030 agtgagagaaactctaacttctctttaatttttctttctccttcactcatcgagaagtgatgatttgaaggtcactttttgacctagaatcac 29249122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 51303923 - 51303847
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcaccc 353  Q
    ||||||||||| ||||||| ||| ||   |||||||||||||||| ||||| ||| |||||||||||| ||||||||    
T  51303923 cttctctctaagttttcttcctcttttactcatcgaggagggatgattttatgtcaatttttgacctagaatcaccc 51303847  T

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Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 42460581 - 42460623
Alignment:
Q  309 atcgaggagggatggttttaggtca-tttttgacctaaaatca 350  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  42460581 atcgaggagggatgattttaggtcagtttttgacctaaaatca 42460623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 4396614 - 4396535
Alignment:
Q  275 caacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca--tttttgacctaaaatcacccct 355  Q
    |||||||||| ||| ||||||||||| |||| || ||||||||   ||||||||||| |  ||||||||||| ||||||||||    
T  4396614 caacttctctttaagttttctttctctttcgctcgtcgaggag---tggttttaggttatttttttgacctagaatcacccct 4396535  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 36910957 - 36910880
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| |||||||||||||||| |||| ||| |||||  | |||||||||||||| | | ||||| |||| |||||    
T  36910957 agtgagagaaactccaacttctctataaactttttttcttttccgttcatcgaggagaggtcgttttgggtctttttt 36910880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 46220480 - 46220553
Alignment:
Q  276 aacttctctctaaattttctttctccttcgttcatcgagg-agggatggttttaggtcatttttgacctaaaat 348  Q
    |||||||||||||| |||||||||| ||  || || |||| |||| |||||||||||||||||| || ||||||    
T  46220480 aacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtcatttttaacataaaat 46220553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 35846520 - 35846560
Alignment:
Q  156 ggtcttgctatcttgtgcatttagggcacaagtgaaggaat 196  Q
    ||||||| |||||||||| |||||||||||||| |||||||    
T  35846520 ggtcttgttatcttgtgcctttagggcacaagttaaggaat 35846560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 53508069 - 53508101
Alignment:
Q  321 tggttttaggtcatttttgacctaaaatcaccc 353  Q
    |||| ||||||||||||||||||||||||||||    
T  53508069 tggtcttaggtcatttttgacctaaaatcaccc 53508101  T

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Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 31013871 - 31013773
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  31013871 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 31013773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 17693913 - 17693816
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||| ||||| |||||||    
T  17693913 agtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtcatttttgacctagaatcatccctcta 17693816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 358
Target Start/End: Complemental strand, 7677579 - 7677482
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    |||||| |||||| || ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||| |||||||||||||    
T  7677579 gtgagataaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 7677482  T

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Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 10377494 - 10377563
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10377494 aaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttt 10377563  T

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Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 23230436 - 23230530
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctcta 358  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||| || | |||||||||| |||||||||| |||||||||||||||    
T  23230436 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-gttttaggtcaatttttgaccaaaaatcacccctcta 23230530  T

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Target: chr8; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 25191366 - 25191268
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| | || ||||||||||| |||||||||| |||||||| ||||    
T  25191366 agtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcacccatcta 25191268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 37971086 - 37971179
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||   ||||||||||||| ||||||||||| |||||||||||||    
T  37971086 tgagagaaactccaacttctctctaaattttctttcttcttcattcatcgaggag---tggttttaggtcattttttgacctagaatcacccctcta 37971179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 3673243 - 3673332
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||| ||||||||||||||| |||||||||||||  |||||||| ||||| |||||||||||||||||||||||| ||||| |||||||    
T  3673243 aaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtcatttttgacctagaatcatccctcta 3673332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 7883540 - 7883443
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| || |  |||||||||||||||||||| ||| |||||||||||||    
T  7883540 agtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtcatttttgatctataatcacccctcta 7883443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 358
Target Start/End: Original strand, 29937905 - 29938001
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    |||||| ||||||||| |||||| |||| ||||||||| |||||||||| ||||| || ||||||||| |||||||||||||| |||||||||||||    
T  29937905 gtgagagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtggttttagatcatttttgacctagaatcacccctcta 29938001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 8980986 - 8981081
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccct 355  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||  || |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8980986 agtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccct 8981081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 27110764 - 27110673
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcac 351  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||||||| || || |||||||||||||| |||||| ||||||||||    
T  27110764 agtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatcac 27110673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 1239703 - 1239606
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatcacccctct 357  Q
    ||||||| ||||| |||||||||||||| ||||| ||||| | || ||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  1239703 agtgagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttgacctaaaatcacccctct 1239606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 8412649 - 8412572
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| |||||| |||||||||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  8412649 agtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcattttt 8412572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 15344095 - 15344192
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatcacccctct 357  Q
    ||||||| |||||||||||||||||||| ||||  ||||| |||  ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  15344095 agtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctct 15344192  T

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Target: chr8; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 15433160 - 15433257
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatcacccctct 357  Q
    ||||||| |||||||||||||||||||| ||||  ||||| |||  ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  15433160 agtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctct 15433257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 15524464 - 15524561
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatcacccctct 357  Q
    ||||||| |||||||||||||||||||| ||||  ||||| |||  ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  15524464 agtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctct 15524561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 45446111 - 45446034
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || | |||||| |||||||||    
T  45446111 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttt 45446034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 40211606 - 40211507
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca--tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||||| ||||||||||| ||| ||||||| |  ||||||||||| |||||||||||||    
T  40211606 agtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttttgacctagaatcacccctcta 40211507  T

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Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 20560041 - 20559946
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt-gacctaaaatcacccctcta 358  Q
    |||| |||| |||||||||||||||| ||| ||||| ||||||||||||| ||||| ||||||||| |||||||| |||||| |||||||||||||    
T  20560041 gagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctcta 20559946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 20571603 - 20571508
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt-gacctaaaatcacccctcta 358  Q
    |||| |||| |||||||||||||||| ||| ||||| ||||||||||||| ||||| ||||||||| |||||||| |||||| |||||||||||||    
T  20571603 gagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctcta 20571508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 1236993 - 1236896
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatcacccctct 357  Q
    ||||||| ||||| |||||||||||||| ||||| ||||| |||| |||| |||||||| ||||||||||||||| ||||||||||||| | ||||||    
T  1236993 agtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttgacctaaaataatccctct 1236896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 24099560 - 24099465
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctct 357  Q
    ||||||| ||||| |||||||||||||  ||||||||||| |||  |||||||| |||| ||| |||||||||||||||||||| ||||||||||||    
T  24099560 agtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtaggg-tggctttaggtcatttttgacctagaatcacccctct 24099465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 33214930 - 33214854
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    |||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||| |||||    
T  33214930 gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtctttttt 33214854  T

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Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 20553542 - 20553451
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt-gacctaaaatcacccc 354  Q
    |||| |||| ||||||||||| |||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||| |||||| |||||||||    
T  20553542 gagagaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttagatcatttttggacctagaatcacccc 20553451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 28897502 - 28897598
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt-gacctaaaatcacccctcta 358  Q
    ||||| ||||| |||||||| | |||| | || |||| |||| ||| |||||||||| |||||||| ||||||||| || |||||||||||||||||    
T  28897502 tgagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatctaaaatcacccctcta 28897598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 40619342 - 40619274
Alignment:
Q  290 ttttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||  |||||||| || |||||  |||||||||||||||||||| ||||| |||||||    
T  40619342 ttttctttctcctttattcatcgaagatggatgaatttaggtcatttttgacctagaatcatccctcta 40619274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 353
Target Start/End: Complemental strand, 14916387 - 14916344
Alignment:
Q  310 tcgaggagggatggttttaggtcatttttgacctaaaatcaccc 353  Q
    |||||||||| |||||||||||||||||||||||| ||||||||    
T  14916387 tcgaggaggggtggttttaggtcatttttgacctagaatcaccc 14916344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 361
Target Start/End: Original strand, 41684222 - 41684323
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctctat 359  Q
    ||||||| ||||||||||||| || ||   |||||||||||||| |||||  |||     ||||||||||||| ||||| ||||||||||||||||||||    
T  41684222 agtgagagaaactccaacttccctttaggctttctttctccttcattcataaagggtaagtggttttaggtcagtttttaacctaaaatcacccctctat 41684321  T
Q  360 at 361  Q
    ||    
T  41684322 at 41684323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 27498635 - 27498565
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggt 331  Q
    ||||||| ||||| |||||| ||| |||  |||||||||||||| |||||||| |||||  ||||||||||    
T  27498635 agtgagagaaacttcaacttatctttaagctttctttctccttcattcatcgatgaggggcggttttaggt 27498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 8443808 - 8443744
Alignment:
Q  273 tccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||| |||| | ||||||||||||||| ||| |||||| || |||| ||||||||||||||||||    
T  8443808 tccaatttctttttaaattttctttctctttcattcatcaag-aggggtggttttaggtcattttt 8443744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 24186958 - 24186921
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctcc 301  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  24186958 gagaaaaactccaacttctctctaaactttatttctcc 24186921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 29617757 - 29617664
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcaccc 353  Q
    ||||||| ||| | ||||||||||||||||||| |||||| |||  | ||||| |||   | ||||||||||| ||||||||||| ||||||||    
T  29617757 agtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttgacctacaatcaccc 29617664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 2520584 - 2520682
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  2520584 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 2520682  T

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Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 13633921 - 13634018
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||| || |||||||||||||    
T  13633921 agtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtcatttttgacatagaatcacccctcta 13634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 19853805 - 19853716
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  19853805 aaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcatttttgacctagaatcacccctcta 19853716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 22610999 - 22611088
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| ||||    
T  22610999 aaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtcatttttgacctagaatcacccatcta 22611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 21686542 - 21686445
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||  |||||||||||||| ||||||||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  21686542 agtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtcttttttgacctaaaatcacccctcta 21686445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 4143048 - 4142958
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  4143048 aaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 4142958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 53810843 - 53810933
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  53810843 aaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttgacctataatcacccctcta 53810933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 26633972 - 26633877
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccct 355  Q
    ||||||| ||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||| ||||||||| |||||||||| ||||||||||    
T  26633972 agtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgacctagaatcacccct 26633877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 48257751 - 48257653
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||| |||||||||||| |||||||| |||| ||||||||||| |||||||| ||||    
T  48257751 agtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaatcacccatcta 48257653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 10496149 - 10496242
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcaccc 353  Q
    ||||||| |||||||||||||| |||||| |||||| |||||||||||||||||||||  |||||||||||| |||||||||||| ||||||||    
T  10496149 agtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaatcaccc 10496242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 53443933 - 53444030
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| ||||||||||||||| ||| |||||| ||||||||| |||||| | |||||||||||||||||||||||| || ||||||||||    
T  53443933 agtgagataaacttcaacttctctctaaactttttttctctttcgttcattgaggagcgttggttttaggtcatttttgacctagaaacacccctcta 53444030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 22558764 - 22558669
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||| || ||||||| |||||    
T  22558764 gagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacctctcta 22558669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 22300655 - 22300747
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccct 355  Q
    |||| ||||||||||||||||||||||||| |||||| |||  || |||||||||  ||||||||||||| ||||||||||||||||||||||    
T  22300655 gagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatcacccct 22300747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 358
Target Start/End: Complemental strand, 9165344 - 9165246
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc--atttttgacctaaaatcacccctcta 358  Q
    |||||| ||||||||||||||||||||| ||||||| ||| || |||||||||||| | ||||||||||||  |||||| ||||| |||||||||||||    
T  9165344 gtgagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatattttttacctagaatcacccctcta 9165246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 10259190 - 10259099
Alignment:
Q  267 aaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  |  ||   ||||||||||||||||||||||||||||||||||||||    
T  10259190 aaaaactccaacttctctctaaacattctttctccttcgtttattaaaaagaactggttttaggtcatttttgacctaaaatcacccctcta 10259099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 26091215 - 26091117
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||||||||||||||||||  ||||||||||||| ||||||||||| |  || |||||||| | ||||||||||| |||||||||||||    
T  26091215 agtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaatcacccctcta 26091117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 263 - 358
Target Start/End: Complemental strand, 29961229 - 29961133
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||| ||||||||||||||||||||| ||||||| ||||| ||||||||| |||||||| |||||||| | |||||||| || |||||||| ||||    
T  29961229 tgagagaaactccaacttctctctaaactttctttttcctttgttcatcgaagagggatgattttaggttattttttgacatagaatcacccatcta 29961133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 36204682 - 36204586
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctct 357  Q
    |||||||  ||||||| ||||||||||  ||||||||||| |||  ||||| |||| ||||||||||||||||||||| ||||| ||||||||||||    
T  36204682 agtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcattttttacctagaatcacccctct 36204586  T

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Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 35348121 - 35348211
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||||||||||| |||| ||| ||||||||||| |||||| |||||| || |||||||||| ||||||||||| ||||||| |||||    
T  35348121 aaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaatcacctctcta 35348211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 43510014 - 43510104
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||| |||||||||| |||| |||| |||||||||||||||||| || || ||||||||||||| ||||||||||| |||||| ||||||    
T  43510014 aaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatcactcctcta 43510104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 358
Target Start/End: Original strand, 9178165 - 9178262
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||| ||||| ||  ||||||||||| |||||||||||||| |||||| ||||||| |||| |||||||| ||||||||||| |||||||| ||||    
T  9178165 gtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaatcacccttcta 9178262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 47320703 - 47320612
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatcac 351  Q
    ||||||| ||||| |||||||||| ||| ||||| ||||| |||| |||||||| |||| ||||||||||||||| |||||| |||||||||    
T  47320703 agtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttgacttaaaatcac 47320612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 56156853 - 56156782
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat 334  Q
    ||||| ||||||||||||||||||||| |||||||||  |||||||||| |||| || ||||||||||||||    
T  56156853 tgagagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtggttttaggtcat 56156782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 24099355 - 24099274
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat--ttttgacctaaaatcacccctcta 358  Q
    ||||||||||| ||||||||| || |||||||||||||| | ||||||||||||||  |||||||||| ||||| |||||||    
T  24099355 ttctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttttgacctagaatcatccctcta 24099274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 29121954 - 29121889
Alignment:
Q  286 taaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcac 351  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  29121954 taaattttatttctccttcgttcatcgagga-tgatggttttaggtcattttttgacctaaaatcac 29121889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 54021668 - 54021766
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| ||| ||||||||||| ||||||||| |||| ||||||||||  |  ||||||||||||| |||||||| |||||||| |||||||    
T  54021668 agtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatccctcta 54021766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 45418339 - 45418431
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||||| |||||||||||||||  || |||||||| | ||||||||||||   ||||||||||||| ||||||||||| ||||| |||||||    
T  45418339 gagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgaggag---tggttttaggtcattttttgacctagaatcatccctcta 45418431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 5119145 - 5119244
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttg--acctaaaatcacccctcta 358  Q
    ||||||| ||| | |||||||| |||||| ||| |||||||||| |||||| ||||||| |||||||| |||||||||   ||||| |||||||||||||    
T  5119145 agtgagataaatttcaacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcattttttttacctagaatcacccctcta 5119244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 32766328 - 32766419
Alignment:
Q  269 aaactccaacttctctctaaatt-ttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||||||||| ||||||   || |||||||||||||||| |||  ||| ||||||||||||| ||||||||||| |||||||||||||    
T  32766328 aaactccaacttctttctaaaaaattttttctccttcgttcattgagagggggtggttttaggtcattttttgacctagaatcacccctcta 32766419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 51024763 - 51024712
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcg 312  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  51024763 agtgagagaaactccaacttctctctatactttctttctccttcgttcatcg 51024712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 51888516 - 51888441
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||| ||||| |||||| ||||||  ||||||||||| |||  ||||||||||||| ||||||||||||||||||    
T  51888516 tgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttt 51888441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 268 - 338
Target Start/End: Original strand, 43126693 - 43126763
Alignment:
Q  268 aaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    |||||||||||||||||||||| ||||||| |  |||||||||||| ||||| || ||||||||| |||||    
T  43126693 aaaactccaacttctctctaaactttctttttttttcgttcatcgaagaggggtgattttaggtctttttt 43126763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 18935594 - 18935687
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcaccc 353  Q
    ||||||| ||||||   ||||||||||| ||||||| ||| |||| ||||||||||||| || ||| ||||| |||||||||||| ||||||||    
T  18935594 agtgagagaaactctgtcttctctctaagttttcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgacctagaatcaccc 18935687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 33920859 - 33920936
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||||| |||||| || ||||| ||||||||| |||| ||||||||| | || ||||||||||||||||||    
T  33920859 agtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtggttttaggtcattttt 33920936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 9643184 - 9643276
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgagga-gggatggttttaggtca-tttttgacctaaaatcac 351  Q
    ||||||| |||||||||||||||||||| |||||||| || || | ||||||| || ||| |||||||| |||| ||||||||||| ||||||    
T  9643184 agtgagagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatcac 9643276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 56040915 - 56040849
Alignment:
Q  294 ctttctccttcgttcatcgaggagggatggttttaggtcat--ttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||  |||||| | ||||||||||||||  |||||||||| |||||||||||||    
T  56040915 ctttctccttcgttcactgaggagaggtggttttaggtcatttttttgacctagaatcacccctcta 56040849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 21662304 - 21662377
Alignment:
Q  273 tccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaa 346  Q
    ||||| || |||||||| ||||||||| |||| |||| ||||||||| ||||||||||||| |||||||||||||    
T  21662304 tccaatttttctctaaaatttctttcttcttcattca-cgaggaggggtggttttaggtcattttttgacctaaa 21662377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 21671068 - 21671141
Alignment:
Q  273 tccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaa 346  Q
    ||||| || |||||||| ||||||||| |||| |||| ||||||||| ||||||||||||| |||||||||||||    
T  21671068 tccaatttttctctaaaatttctttcttcttcattca-cgaggaggggtggttttaggtcattttttgacctaaa 21671141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 306 - 351
Target Start/End: Original strand, 52978676 - 52978721
Alignment:
Q  306 ttcatcgaggagggatggttttaggtcatttttgacctaaaatcac 351  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||||    
T  52978676 ttcatcgatgagagatggttttatgtcatttttgacctaaaatcac 52978721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 27651772 - 27651848
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcaccc 353  Q
    ||||||||||||||||||| ||| |||  ||||||||||||| || | ||||||| ||||||||||||  |||||||    
T  27651772 cttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttgacctaggatcaccc 27651848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 51535082 - 51535160
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctct 357  Q
    |||||||||| || |||||||| |||  ||||| | ||||||||||||||  | |||||||||||| ||||||| ||||    
T  51535082 ttctctctaagttctctttctctttcaatcatcaaagagggatggttttaaataatttttgacctagaatcacctctct 51535160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 9713708 - 9713785
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| |||||| | ||||||||||| || |||||||| |||  ||||||||||||| || ||||| ||| |||||    
T  9713708 agtgagagaaactctaccttctctctaagttctctttctctttcactcatcgaggaggggtgattttatgtctttttt 9713785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 18048712 - 18048791
Alignment:
Q  275 caacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca--tttttgacctaaaatcacccct 355  Q
    |||||||||| ||| ||||||||||| |||| || ||||||||   ||||||||||| |  ||||||||||| ||||||||||    
T  18048712 caacttctctttaagttttctttctctttcgctcgtcgaggag---tggttttaggttatttttttgacctagaatcacccct 18048791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 2069849 - 2069789
Alignment:
Q  290 ttttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatca 350  Q
    |||| ||||||||||| |||| ||| |||| ||||||||||||  |||||||||| |||||    
T  2069849 ttttttttctccttcgctcattgagaagggttggttttaggtcgattttgacctataatca 2069789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 9e-34; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 68294 - 68209
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccc 354  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  68294 aaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggtaatttttgacctagaatcacccc 68209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 12170283 - 12170381
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  12170283 agtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 12170381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 33053462 - 33053372
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| |||||||    
T  33053462 aaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcatccctcta 33053372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 3913875 - 3913780
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctc 356  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  3913875 agtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggg-tggttttaggtcattttttgacctagaatcacccctc 3913780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 23128414 - 23128504
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  23128414 aaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgacctagaatcacccctcta 23128504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 32328885 - 32328790
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccct 355  Q
    ||||||| |||||| |||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  32328885 agtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttgacctataatcacccct 32328790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 29320153 - 29320066
Alignment:
Q  272 ctccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||||| |||||| ||| |||||||||||||    
T  29320153 ctccaacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatcacccctcta 29320066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 606000 - 606090
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||| || ||||| |||| |||||||||||  ||||||||||||    
T  606000 aaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctaggatcacccctcta 606090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 30894427 - 30894522
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||| ||||| ||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||| ||| ||||||||||| |||||||||||||    
T  30894427 tgagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctcta 30894522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 34018371 - 34018446
Alignment:
Q  284 tctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||    
T  34018371 tctaaactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccctcta 34018446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 7515493 - 7515405
Alignment:
Q  272 ctccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca--tttttgacctaaaatcacccctcta 358  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||| ||||||||| | |  ||||||||||| |||||||||||||    
T  7515493 ctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgacctagaatcacccctcta 7515405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 9723673 - 9723603
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatc-gaggagggatggttttaggtcattttt 338  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||||||||||| |||||    
T  9723673 aaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggtggttttaggtctttttt 9723603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 127465 - 127560
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| |||  ||||||||||||||||  || |||||| ||||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||    
T  127465 agtgagagaaatcccaacttctctctaaacgttttttctctttcgttcattgaggaggg-tggttttaggt-atttttgatctaaaatcacccctcta 127560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 30608814 - 30608717
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||| | ||| | | |||||||| |||||||||| | |||  |||| ||||||||||||||||||||||||||| |||||||||||||    
T  30608814 agtgagagaaactcaaccttttgtttaaattttttttctccttcatccattaaggatggatggttttaggtcatttttgacctagaatcacccctcta 30608717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 9719693 - 9719635
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatc-gaggaggg 319  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  9719693 gtgagagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggg 9719635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 9721812 - 9721762
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatc 311  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  9721812 agtgagagaaactccaacttctctctaaactttctttctcgttcgttcatc 9721762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 29255744 - 29255654
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatca 350  Q
    ||||||| ||| ||||||||||||| ||| | ||||||||||||||||||||| |||   |||||||| |||||| ||||| |||||||||    
T  29255744 agtgagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgtggttttatgtcattctttgatctaaaatca 29255654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 351
Target Start/End: Complemental strand, 7976452 - 7976376
Alignment:
Q  275 caacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcac 351  Q
    |||||| ||||||| ||||||||||  |||  |||||||| | || |||||||||||||||||||||||| ||||||    
T  7976452 caacttttctctaagttttctttctttttcactcatcgagcatgggtggttttaggtcatttttgacctagaatcac 7976376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 4010802 - 4010705
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctct 357  Q
    ||||||| ||||| || ||||||||||| ||||||||||||||  || || |||||||  ||  ||||| ||| ||||||||||| ||||||||||||    
T  4010802 agtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatcacccctct 4010705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 357
Target Start/End: Original strand, 14801624 - 14801704
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctct 357  Q
    ||||||||||| ||||||| ||| |||  |||||||| |||| || ||||||||| |||||||||||| ||| ||||||||    
T  14801624 cttctctctaagttttcttcctctttcactcatcgagaaggggtgattttaggtcaatttttgacctagaataacccctct 14801704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 350
Target Start/End: Original strand, 32059697 - 32059787
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatca 350  Q
    ||||||| ||| ||||| |||||| ||||  ||||||||| ||| |||||||||||  | |||||||| |||||| ||||||||| |||||    
T  32059697 agtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaatca 32059787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 32192011 - 32191957
Alignment:
Q  284 tctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||| ||||||||||| ||| |||||| ||||||| |||||||||||| |||||    
T  32192011 tctaagttttctttctctttcattcatcaaggaggggtggttttaggtccttttt 32191957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 351
Target Start/End: Original strand, 545842 - 545903
Alignment:
Q  290 ttttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcac 351  Q
    ||||||| ||| |||  ||||||||||||| || ||||||| ||||||||||||| ||||||    
T  545842 ttttcttcctctttcactcatcgaggaggggtgattttaggccatttttgacctagaatcac 545903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 24228006 - 24227937
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    |||||||||||| |||| ||  ||| ||||| |||| |||||| ||||||  ||||||||||||||||||    
T  24228006 aaactccaacttttctccaagctttatttcttcttcattcatcaaggaggagtggttttaggtcattttt 24227937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 30493322 - 30493414
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttt-tgacctaaaatcaccc 353  Q
    ||||||| |||||||||| ||||| ||| |||||||| || |||  || |||| ||||| ||||||| ||||||||| ||||||| ||||||||    
T  30493322 agtgagagaaactccaacctctctttaagttttctttttctttcactcgtcgaagaggg-tggttttcggtcattttttgacctagaatcaccc 30493414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 5e-32; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 38597584 - 38597682
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||    
T  38597584 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgacctagaatcacccctcta 38597682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 13007023 - 13007113
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||    
T  13007023 aaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctcta 13007113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 31392059 - 31391961
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  31392059 agtgagaaaaattctaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 31391961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 6012432 - 6012342
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||| || |||||||||||||    
T  6012432 aaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacccctcta 6012342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 38007144 - 38007242
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||||    
T  38007144 agtgagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctcgaatcacccctcta 38007242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 34945216 - 34945306
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||| ||||    
T  34945216 aaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaatcacccttcta 34945306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 26878380 - 26878283
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||| |||||||||||| | |||||||| ||||||||||| ||| ||||||| |||||    
T  26878380 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtcatttttgatctagaatcacctctcta 26878283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 7036014 - 7036105
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcac 351  Q
    ||||||| |||||| |||||||||||||| |||||||||||||| |||||| ||| ||| ||||||||||||| ||||||||||||||||||    
T  7036014 agtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgacctaaaatcac 7036105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 8096786 - 8096700
Alignment:
Q  273 tccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctctat 359  Q
    ||||||||||||||||| ||| ||||| ||||||| || |||||||  |||||||||||||||||||||||| ||||||||||||||    
T  8096786 tccaacttctctctaaactttttttcttcttcgtttattgaggaggattggttttaggtcatttttgacctagaatcacccctctat 8096700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 9114019 - 9113929
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||| || ||||||||||| |||| ||||| |||||||||||||    
T  9114019 aaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctcta 9113929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 25979952 - 25980021
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || |||||| |||||||||||    
T  25979952 aaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttt 25980021  T

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Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 350
Target Start/End: Complemental strand, 11074199 - 11074112
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggag-ggatggttttaggtcatttttgacctaaaatca 350  Q
    |||| |||||||||||| |||||||| ||||||||||| ||||||||||||||| || ||||||||||| |||||||||||| |||||    
T  11074199 gagagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggttatttttgacctagaatca 11074112  T

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Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 26825223 - 26825315
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt---gacctaaaatcacccctcta 358  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||||   |||||| ||||||| |||||    
T  26825223 aaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactcta 26825315  T

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Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 35850574 - 35850668
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    |||| ||| ||||| ||||||||||| ||| |||||| |||||| ||||||||||| |||||||||||| ||||||||||| |||||||| ||||    
T  35850574 gagagaaagtccaatttctctctaaactttatttctcattcgtttatcgaggaggggtggttttaggtcttttttgacctagaatcacccatcta 35850668  T

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Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 11977239 - 11977171
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttag 329  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  11977239 agtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttag 11977171  T

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Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 350
Target Start/End: Original strand, 6216696 - 6216771
Alignment:
Q  276 aacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatca 350  Q
    |||||||||||||| ||| |||||| ||||||||||||||| || ||||||||||||||| |||||||||||||||    
T  6216696 aacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttgacctaaaatca 6216771  T

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Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 7929985 - 7930076
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccct 355  Q
    ||||||| ||||||||| ||||||||||| |||||||||||    |||||| ||||||| || ||||||||| |||||||||||| ||||||||||    
T  7929985 agtgagagaaactccaaattctctctaaactttctttctcc----ttcatcaaggaggggtgattttaggtcaatttttgacctagaatcacccct 7930076  T

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Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 15571272 - 15571349
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| |||||| |||||||||| ||  |||||||||||||| ||||||||||||  ||||||||| |||||||||    
T  15571272 agtgagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaatggttttatgtcattttt 15571349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 24230089 - 24229988
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaat-tttctttctccttcgttcatcgaggagggatggttttaggtca--tttttg-acctaaaatcacccctc 356  Q
    ||||||| |||||||||||||||||||||  ||||||| | ||||||||||||||||| |  ||||||||||    |||||| |||||||||||||||||    
T  24230089 agtgagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggtttattttttgtacctaaaatcacccctc 24229990  T
Q  357 ta 358  Q
    ||    
T  24229989 ta 24229988  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 4770927 - 4770992
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttag 329  Q
    |||| |||||| |||||||||||||| ||||||||| ||||||| ||||||||||| || ||||||    
T  4770927 gagagaaactctaacttctctctaaactttctttcttcttcgttaatcgaggaggggtgattttag 4770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 14211020 - 14211116
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctct 357  Q
    ||||||| ||||||   ||||||||||| ||||||| ||| |||  ||||||||||||| || ||||||||| |||||||||||| ||||||||||||    
T  14211020 agtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggaggg-tgattttaggtcaatttttgacctagaatcacccctct 14211116  T

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Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 2979592 - 2979517
Alignment:
Q  283 ctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctct 357  Q
    |||||| ||||||| ||| |||  ||||||||||||| || ||||||||| |||||||||||| ||||||||||||    
T  2979592 ctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctataatcacccctct 2979517  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 39567082 - 39567179
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctct 357  Q
    ||||||| |||| ||  ||||||| ||| ||||||| ||| |||  ||||||||||||| || ||||||||| |||||||||||| |||||| |||||    
T  39567082 agtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacgcctct 39567179  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 41630297 - 41630382
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcac 351  Q
    ||||||| ||||| ||||||||||||||  |||||||||| |||    ||||| || || |||||||||||||||||||||||| ||||||    
T  41630297 agtgagagaaacttcaacttctctctaagctttctttctcattc----atcgaagatgg-tggttttaggtcatttttgacctagaatcac 41630382  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 358
Target Start/End: Original strand, 11867529 - 11867564
Alignment:
Q  323 gttttaggtcatttttgacctaaaatcacccctcta 358  Q
    |||||||||||||||||||||||||||||| |||||    
T  11867529 gttttaggtcatttttgacctaaaatcaccactcta 11867564  T

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Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 14082655 - 14082596
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||||||| ||||||| ||||||| |||||||||||   |||||||| |||||||||    
T  14082655 ttctctctaaactttctttatccttcgctcatcgaggagaagtggttttatgtcattttt 14082596  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 28541208 - 28541124
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgaccta 344  Q
    ||||||| ||||||   ||||||||||| ||||||| ||| |||  ||||||||| ||| || ||||||||| ||||||||||||    
T  28541208 agtgagagaaactctttcttctctctaagttttcttcctctttcactcatcgaggtggggtgattttaggtcaatttttgaccta 28541124  T

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Target: scaffold0445 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 1139 - 1229
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||    
T  1139 aaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctcta 1229  T

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Target: scaffold0127 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 15279 - 15377
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  15279 agtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 15377  T

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Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 9450439 - 9450341
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  9450439 agtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaatcacccatcta 9450341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 42978397 - 42978495
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||| |||||    
T  42978397 agtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccactcta 42978495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 47590103 - 47590200
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||||| ||| |||||||||||||    
T  47590103 agtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtcatttttgaactagaatcacccctcta 47590200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 358
Target Start/End: Complemental strand, 37837758 - 37837662
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||| |||||||||||||| |||||||||| |||||||||||||    
T  37837758 tgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 37837662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 12141607 - 12141512
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| || |||||||||||||    
T  12141607 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacatagaatcacccctcta 12141512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 13797233 - 13797135
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||    
T  13797233 agtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaacctagaatcacccctcta 13797135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 30757113 - 30757023
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||    
T  30757113 aaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatcacccctcta 30757023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 48317106 - 48317016
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt-gacctaaaatcacccctcta 358  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| |||||| |||||||||||||    
T  48317106 aaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctcta 48317016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 8013767 - 8013669
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| ||||||||||||||| ||||||||| ||| ||||||||||||||| ||||||||| ||| ||||||||||| |||||||||||||    
T  8013767 agtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaatcacccctcta 8013669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 19296675 - 19296765
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||| |||||| |||| ||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  19296675 aaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 19296765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 19405056 - 19404958
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||||||||||||||||||| ||||||||||||  ||||| ||| |||| |||||||||||||| |||||||||| |||||||||||||    
T  19405056 agtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcacccctcta 19404958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 39171894 - 39171796
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||||||| | |||||||| ||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||    
T  39171894 agtgagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaatcacccctcta 39171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 48061214 - 48061305
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccc 354  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||||||| |||||||| || |||||||||    
T  48061214 gagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcattttttgacttagaatcacccc 48061305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 34899898 - 34899811
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| |||   ||||||||||||| ||||||||||| |||||||||||||    
T  34899898 aaactccaacttctctctaaactttctttctccttcgttcaccgatgag---tggttttaggtcattttttgacctagaatcacccctcta 34899811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 40992979 - 40993068
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||||| |||  |||| |||||||||||||||| || | ||||||||||| |||||||||||||||||| ||||||    
T  40992979 aaactccaacttctctctaaactttagttcttcttcgttcatcgaggatgg-tagttttaggtcattttttgacctaaaatcactcctcta 40993068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 9915939 - 9916010
Alignment:
Q  267 aaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| |  ||||||||| |||||    
T  9915939 aaaaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtctttttt 9916010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 9923851 - 9923922
Alignment:
Q  267 aaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| |  ||||||||| |||||    
T  9923851 aaaaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtctttttt 9923922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 22087123 - 22087197
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcac 351  Q
    ||||||||||| ||||||||||||||| || ||||| ||||||||||||| ||||| ||||||||||| ||||||    
T  22087123 cttctctctaagttttctttctccttcatttatcgaagagggatggtttttggtcattttttgacctagaatcac 22087197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 24770055 - 24770120
Alignment:
Q  272 ctccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttt 337  Q
    |||||||||||||||||| |||||||||| |||||||||||||  ||| || ||||||||||||||    
T  24770055 ctccaacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcatttt 24770120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 358
Target Start/End: Original strand, 35132757 - 35132838
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctcta 358  Q
    ||||||||||| ||||||| ||| |||  ||||||||||||| || ||||||||| |||||||||||| |||||||||||||    
T  35132757 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctcta 35132838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 38798587 - 38798674
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatcacccctcta 358  Q
    |||||||||||||| ||| || |||||||||| ||||||||||   ||||||||||||||||||||| |||||| || |||||||| ||||    
T  38798587 aaactccaacttctgtctgaactttctttctcattcgttcatc---gagggatggttttaggtcattctttgacatagaatcacccatcta 38798674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 45350494 - 45350436
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggg 319  Q
    ||||||| ||||| ||||||||||||||| ||| |||||||||||||||| ||||||||    
T  45350494 agtgagagaaacttcaacttctctctaaactttttttctccttcgttcatagaggaggg 45350436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 49149114 - 49149041
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt-gacctaaaatcacc 352  Q
    ||||||||| |||||| |||||||||| |||||||| |||| |||||||| ||||||||| ||||||||||||||    
T  49149114 ttctctctatattttcattctccttcgctcatcgagtaggg-tggttttaagtcattttttgacctaaaatcacc 49149041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 39329095 - 39329018
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| |||||| ||||| | |||||| ||||||||||||| ||||||||||||||  ||| |||||||| |||||    
T  39329095 agtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtctttttt 39329018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 1749426 - 1749350
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcaccc 353  Q
    ||||||||||| ||||||| ||| |||  ||||||||||||| || ||||||||| |||||||||||| ||||||||    
T  1749426 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcaccc 1749350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 22742745 - 22742824
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctct 357  Q
    |||||||||| ||||||| ||| ||| |||||||||||||| || ||||||||| |||||| | ||| ||||||||||||    
T  22742745 ttctctctaagttttcttcctctttcattcatcgaggaggggtgattttaggtcaatttttaatctagaatcacccctct 22742824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 3224719 - 3224642
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||| |||||||| | ||||||||||||||||| |||  || |||| || || ||||||||||||||||||    
T  3224719 agtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtcattttt 3224642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 4529868 - 4529945
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||||| || ||||||||||| | ||||||||||||| |||||| | ||| | || |||||||||||||||    
T  4529868 agtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttt 4529945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 5078695 - 5078598
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctct 357  Q
    ||||||| ||||| |||||||||||||| || ||||| || |||  ||||  |||| || || ||||||||||| |||||||||| ||||||||||||    
T  5078695 agtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaatcacccctct 5078598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 24351145 - 24351050
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccct 355  Q
    ||||||| ||||||   ||||||| ||| ||||||| |||  ||  ||||||||||||| || ||||||||| |||||||||||| ||||||||||    
T  24351145 agtgagagaaactctgtcttctctttaagttttcttcctctctcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccct 24351050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 25287483 - 25287416
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggtttta 328  Q
    ||||||| |||||  ||||||||| ||||||||||||||||||| ||| |||| ||| | ||||||||    
T  25287483 agtgagagaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggtttta 25287416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 353
Target Start/End: Complemental strand, 26610998 - 26610952
Alignment:
Q  306 ttcatcgaggagggatggttttaggtcatttttgacctaaaatcaccc 353  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  26610998 ttcatcgatgaggg-tggttttaggttatttttgacctaaaatcaccc 26610952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 38880846 - 38880800
Alignment:
Q  295 tttctccttcgttcatcgaggagggatggttttaggtcatttttgac 341  Q
    |||||| ||||||||| |||||||||  |||||||||||||||||||    
T  38880846 tttctctttcgttcattgaggagggacagttttaggtcatttttgac 38880800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 356
Target Start/End: Complemental strand, 5348877 - 5348790
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctc 356  Q
    ||||| || ||||| | ||| ||||||||||||||  |||||||||||| | | ||||||||| | ||||||||||| |||||||||||    
T  5348877 aaacttcatcttctttttaagttttctttctcctttattcatcgaggagaggt-gttttaggtaagtttttgacctagaatcacccctc 5348790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 28476030 - 28476106
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccc 354  Q
    |||||||||| ||||||| ||| |||    ||||||||||| || ||||||||| |||||||||||| |||||||||    
T  28476030 ttctctctaagttttcttcctctttcacatatcgaggaggggtgattttaggtcaatttttgacctagaatcacccc 28476106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 29738935 - 29738840
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctcta 358  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||| |||||||||||||    
T  29738935 gagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctcta 29738840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 35484680 - 35484603
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  35484680 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttt 35484603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 34878573 - 34878482
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcac 351  Q
    ||||||| |||||||||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  34878573 agtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcac 34878482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 41176980 - 41177047
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattt 336  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  41176980 aaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattt 41177047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 7337957 - 7337867
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| |||||||||||||    
T  7337957 aaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgatctagaatcacccctcta 7337867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 49626701 - 49626797
Alignment:
Q  262 gtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatcacccctct 357  Q
    |||||| |||||||||||||||||||| | ||| ||||| |||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  49626701 gtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcacccctct 49626797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 358
Target Start/End: Original strand, 3228064 - 3228158
Alignment:
Q  265 agaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||| ||||||||||||| ||||| ||||| |||||||| ||||    
T  3228064 agaaaaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcattttttaacctacaatcacccatcta 3228158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 45415349 - 45415447
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| |||||||||| |||| ||||||||| ||||||| ||||||||||| ||||||||||||| ||||||| ||| |||||||||||||    
T  45415349 agtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaatcacccctcta 45415447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 5983641 - 5983717
Alignment:
Q  276 aacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcac 351  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  5983641 aacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttgacctagaatcac 5983717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 356
Target Start/End: Complemental strand, 7837059 - 7836972
Alignment:
Q  270 aactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctc 356  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||| || |||||||||||||| |||||| ||| |||||||||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaatcacccctc 7836972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 10776759 - 10776664
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||| ||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||| ||| ||||||||||| |||||||| ||||    
T  10776759 gagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatcacccatcta 10776664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 31983970 - 31984068
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||| ||||||| ||||| | ||||||||||||| ||||||||||| || |||| |||||    
T  31983970 agtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagcacctctcta 31984068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 21686663 - 21686740
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||||| |||||| | ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  21686663 agtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttt 21686740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 45789355 - 45789452
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctct 357  Q
    ||||||| |||||| |  ||||||||||||||| ||||| |||| |||||||||||  ||||||||||||||| ||||||||||| ||||||||||||    
T  45789355 agtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcattttttgacctagaatcacccctct 45789452  T

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Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 940155 - 940247
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcaccc 353  Q
    |||||||||||||| || |||||||||||||||||||||| ||  ||||||||||| |  |||||||| ||||||||| ||||| ||||||||    
T  940155 agtgagaaaaactctaaattctctctaaattttctttctcttttcttcatcgaggatgagtggttttaagtcattttttacctagaatcaccc 940247  T

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Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 27456330 - 27456429
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc--atttttgacctaaaatcacccctcta 358  Q
    ||||||||||||| |||||||| |||||| |||||||||||||| ||| |||||||||||||||||||  ||   ||||| |||||||||||| ||||||    
T  27456330 agtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggatggttttaactctttttttttacctaaaatcactcctcta 27456429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 51916954 - 51916863
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttagg-tcatttttgacctaaaatcac 351  Q
    ||||||| ||||| ||| || |||||||| |||||||||||||||||||| |||||||| |||||||||| |  ||||||||||||||||||    
T  51916954 agtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacctaaaatcac 51916863  T

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Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 357
Target Start/End: Complemental strand, 11462747 - 11462653
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctct 357  Q
    |||| ||||| ||| ||||||||||| |||||||||||||||||||| || ||||| || |||||||| | ||||||||||| ||||||||||||    
T  11462747 gagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctagaatcacccctct 11462653  T

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Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 44915435 - 44915513
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgagga-gggatggttttaggtcattttt 338  Q
    ||||||||||| | ||||||||||||||| |||||||||| ||| ||||||||||| ||| ||||||||||||||||||    
T  44915435 agtgagaaaaatttcaacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttt 44915513  T

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Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 1742071 - 1742168
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctct 357  Q
    ||||||| |||||| ||||||| |||||| || ||||||| |||||||||| ||||  | ||||||||||||| ||||||||||| ||||||||||||    
T  1742071 agtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgacctagaatcacccctct 1742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 18939112 - 18939189
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||||| || ||||||||||| ||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  18939112 agtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttt 18939189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 338
Target Start/End: Original strand, 32394819 - 32394866
Alignment:
Q  291 tttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32394819 tttctttctccttcgttcatcgaggaggggtggttttaggtcattttt 32394866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 50377144 - 50377214
Alignment:
Q  287 aaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctct 357  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||||    
T  50377144 aaattttctttctccttcgttcatcgaaga-ggatggttttaggtcattttttgacctagaatcatccctct 50377214  T

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Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 350
Target Start/End: Original strand, 44543063 - 44543153
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt-tttgacctaaaatca 350  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||  |||||||||| || || |||||||| ||| |||||||||||||||    
T  44543063 agtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttgacctaaaatca 44543153  T

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Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 21947919 - 21947831
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatca 350  Q
    ||||||| ||||| ||| || |||||||| |||||||||| ||||||||||||||| || ||||||||||| |||||| ||||| |||||    
T  21947919 agtgagagaaacttcaatttttctctaaactttctttctc-ttcgttcatcgaggatgggtggttttaggttatttttaacctagaatca 21947831  T

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Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 358
Target Start/End: Complemental strand, 15435172 - 15435076
Alignment:
Q  263 tgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||| ||||||||||||||||| |||  |||||||| |||| |||||| |||||||  ||||||||||||| |||||| ||| ||||| |||||||    
T  15435172 tgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttgatctagaatcaaccctcta 15435076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 43412162 - 43412255
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatg-gttttaggtcatttttgacctaaaatcacccct 355  Q
    ||||||||||||| |||||| ||||||| || |||||||| ||| |||||||||||||| || ||| |  |||||||||||| |||||||||||||    
T  43412162 agtgagaaaaacttcaacttatctctaacttctctttctctttcattcatcgaggaggggtgagttgt--gtcatttttgacttaaaatcacccct 43412255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 14872429 - 14872527
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||||||||||| ||| || ||||||||| |||| ||||||||| |||  ||||||| ||||| |||||||| || |||||| ||||||    
T  14872429 agtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaatcactcctcta 14872527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 26535190 - 26535260
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggt 331  Q
    ||||||| |||||| |||||||||||||| ||||| ||||||||||||||| |||| |  |||||||||||    
T  26535190 agtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagtggttttaggt 26535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 32679401 - 32679324
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    ||||||| ||| |||||||| ||||||| ||||||||||| |||  || |||||||||| |||||||| |||||||||    
T  32679401 agtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttt 32679324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 35462332 - 35462263
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattttt 338  Q
    |||||| ||||| |||||||| ||||||||||||||||| || ||| | || ||||||||||||||||||    
T  35462332 aaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcattttt 35462263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 36894532 - 36894445
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||| |||||||||| |||||||||||||||   |||||||||| ||||| ||||| || |||| ||||||||||| | |||||||||||    
T  36894532 aaacttcaacttctctttaaattttctttctc---cgttcatcgaagaggggtggttctaagtcattttttgacctagagtcacccctcta 36894445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 4413097 - 4413168
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatt 335  Q
    |||| |||||| ||||| |||||||| ||||||||| ||||||| ||||||||||  | |||||||||||||    
T  4413097 gagagaaactctaacttttctctaaactttctttcttcttcgtttatcgaggaggagtagttttaggtcatt 4413168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 12634957 - 12635052
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttt-tgacctaaaatcacccct 355  Q
    ||||||| |||||| ||||||||||||  |||| |||||| |||  || ||||||| |  ||||||||||||||||| ||||||| ||||||||||    
T  12634957 agtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcattttctgacctataatcacccct 12635052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 23291925 - 23291848
Alignment:
Q  283 ctctaaattttctttctccttcgttcatcgaggagggatgg---ttttaggtca-tttttgacctaaaatcacccctc 356  Q
    ||||||| |||||||||||||||||||||||| | || |||   |||||||||| ||||||||||| |||||||||||    
T  23291925 ctctaaactttctttctccttcgttcatcgagaaagggtggttattttaggtcattttttgacctagaatcacccctc 23291848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 352
Target Start/End: Original strand, 31317550 - 31317633
Alignment:
Q  270 aactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcattt-ttgacctaaaatcacc 352  Q
    |||||||  |||||||||||||||||||||| ||| |||||||||| |  |||||||||||| |||| ||||| || |||||||    
T  31317550 aactccacattctctctaaattttctttctctttcattcatcgaggcgttatggttttaggtaatttgttgacatagaatcacc 31317633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 27580428 - 27580332
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||||||||||||| ||| |||| ||| |||||  ||| ||| | || ||||||||  |||||||||||||||| ||||| |||||||    
T  27580428 agtgagagaaactccaacttctctttaagtttt-tttgtcctttattcgtcgggaagagatggtttcgggtcatttttgacctagaatcatccctcta 27580332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 16161640 - 16161719
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtc-atttttgacctaaaatcacccctct 357  Q
    |||||||||||||||||| ||| |||   |||||||||||| |  ||||||||| |||||||||||| ||||||| ||||    
T  16161640 ttctctctaaattttcttcctctttcacacatcgaggaggggtaattttaggtcaatttttgacctagaatcacctctct 16161719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 15836001 - 15836075
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacc 352  Q
    |||||||| || |||||||||| ||  |||||| ||||| | ||||||||||||| ||||||||||| |||||||    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcacc 15836075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 350
Target Start/End: Original strand, 15492113 - 15492173
Alignment:
Q  290 ttttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatca 350  Q
    ||||||||||| ||   |||| |||||| | |||||||||||| |||||||||||||||||    
T  15492113 ttttctttctcttttactcattgaggagaggtggttttaggtcttttttgacctaaaatca 15492173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 31918772 - 31918836
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggtttta 328  Q
    |||||||||| ||| ||||||||||| |||||||| | ||  ||| |||||||||| ||||||||    
T  31918772 gagaaaaacttcaatttctctctaaactttctttcacatttattcgtcgaggaggggtggtttta 31918836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 269 - 352
Target Start/End: Complemental strand, 72158 - 72074
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacc 352  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  72158 aaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacc 72074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 2271 - 2176
Alignment:
Q  264 gagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||| |||| ||||||| ||| |||||||||||||    
T  2271 gagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcattttttgatctagaatcacccctcta 2176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 50581 - 50671
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||| || |||||||||| ||||||||||| ||||| |||||||    
T  50581 aaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgacctagaatcatccctcta 50671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 33050 - 32952
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctcta 358  Q
    ||||||| |||||| |||||||||||||| ||||||||| ||||||| ||||||||||  |||||||||||||| ||||||| || |||||||||||||    
T  33050 agtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttgacatagaatcacccctcta 32952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 58381 - 58284
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat-ttttgacctaaaatcacccctct 357  Q
    ||||||| |||||||||||||||||||| ||||| || || |||  || |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  58381 agtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccctct 58284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 19337 - 19242
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctct 357  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||  ||||||||||||| |||||||| ||| ||||||||||| ||| ||||||||    
T  19337 agtgagagaaactccaacttctctctaa-ttttctttctctttcactcatcgaggaggggtggttttatgtcgtttttgacctagaattacccctct 19242  T

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Target: scaffold0603 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 7521 - 7595
Alignment:
Q  278 cttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcac 351  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  7521 cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcac 7595  T

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Target: scaffold0554 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 10674 - 10762
Alignment:
Q  269 aaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    |||||| |||||||||||||| || ||| ||||||| |||||||||||| | ||||||||||||| |||||||||||| |||||||||||    
T  10674 aaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtca-ttttgacctaaagtcacccctcta 10762  T

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Target: scaffold0087 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 25631 - 25533
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||| |||||| ||||||||     ||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||||||    
T  25631 agtgagagaaacttcaacttttctctaaaaaaattttctccttcgttcatcgaggaggggtggttttatgtcattttttgacctataatcacccctcta 25533  T

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Target: scaffold0219 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 15140 - 15042
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||||| |  |||  |||||| | ||||||||||| ||||||| |||||    
T  15140 agtgagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaatcaccactcta 15042  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 71549 - 71487
Alignment:
Q  296 ttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcacccctcta 358  Q
    ||||||||| ||||  ||| |||| ||||||||||||||||||||||||||||||||||||||    
T  71549 ttctccttcattcacagagaaggggtggttttaggtcatttttgacctaaaatcacccctcta 71487  T

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Target: scaffold0262 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 2119 - 2029
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcac 351  Q
    ||||||| |||||||||||||| || ||| ||||||||| |||| ||||| ||||||   || ||||||||| ||||| ||||||||||||    
T  2119 agtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgtgtttttaggtctttttttacctaaaatcac 2029  T

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Target: scaffold0121 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 31567 - 31474
Alignment:
Q  267 aaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtcat--ttttgacctaaaatcacccctcta 358  Q
    |||||||||||||| ||| |||| |||||||||||||||||||||||| |||  || ||||| |||||  |||| ||| |||||||| ||||||    
T  31567 aaaaactccaacttttctttaaactttctttctccttcgttcatcgagcaggagtgattttatgtcattgtttttaccaaaaatcactcctcta 31474  T

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Target: scaffold0634 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 8301 - 8399
Alignment:
Q  261 agtgagaaaaactccaacttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacccctcta 358  Q
    ||||||| | ||| |||||||||| |||| ||||||||   |  ||||||||||||||| |||||||| || | ||||||||||| |||||||||||||    
T  8301 agtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccctcta 8399  T

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Target: scaffold0136 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 10307 - 10251
Alignment:
Q  295 tttctccttcgttcatcgaggagggatggttttaggtcatttttgacctaaaatcac 351  Q
    |||||||||||||||| ||||| ||||| ||||| ||||||||| ||||| ||||||    
T  10307 tttctccttcgttcattgaggatggatgattttatgtcatttttcacctagaatcac 10251  T

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Target: scaffold0492 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 12721 - 12795
Alignment:
Q  279 ttctctctaaattttctttctccttcgttcatcgaggagggatggttttaggtca-tttttgacctaaaatcacc 352  Q
    |||||||| || |||||||||| ||  |||||| ||||| | ||||||||||||| ||||||||||| |||||||    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcacc 12795  T

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