View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1727-Insertion-2 (Length: 143)
Name: NF1727-Insertion-2
Description: NF1727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1727-Insertion-2 |
 | |
|
| [»] chr7 (1 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 2963761 - 2963625
Alignment:
| Q |
7 |
aggatatcctagaatatggctttggctcttagaggaccactaaatttgcccaatatttaatcgtccacaaccattcaacttaaaagctacaaatcattcc |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2963761 |
aggatatcctagaatatggctttggctcttagaggaccactaaatttgcccaatatttaatcgtccacaaccattcaacttaaaagctacaaatcattcc |
2963662 |
T |
|
| Q |
107 |
aggaccatcttcaaaagcaagatcaccaaatgtagcc |
143 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
2963661 |
tggaccatcttcaaaagcaagatcaccaaatgtagcc |
2963625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University