View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17270_low_4 (Length: 244)
Name: NF17270_low_4
Description: NF17270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17270_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 13276785 - 13276564
Alignment:
| Q |
16 |
caaatcatgtagtgatcgatcataaaaaccaagatataatagcatcataataatctatacatattagattttgcaagactcaagaataaaccaagcaaga |
115 |
Q |
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| T |
13276785 |
caaatcatatagtgatcgatcataaaaaccaagagataatagcatcataataacctatacatattagattttgcaagactcaagaataaaccaagcaaga |
13276686 |
T |
|
| Q |
116 |
ttaattcacaaccaaacaagtaaaaatctctcttcaagttgttgaagaagaaggtgagccagtaggtttaaaagcagcttgttcagcacaagagagaatc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13276685 |
ttaattcacaaccaaacaagtaaaaatctctcttcaagttgttgaagaagaaggtgagccagtaggtttaaaagcagcttgttcagcacaagagagaatc |
13276586 |
T |
|
| Q |
216 |
tcattaggccctgcttcatctc |
237 |
Q |
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||||||||||||||||| |||| |
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| T |
13276585 |
tcattaggccctgcttcttctc |
13276564 |
T |
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