View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17271_high_9 (Length: 207)
Name: NF17271_high_9
Description: NF17271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17271_high_9 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 61 - 207
Target Start/End: Original strand, 32570843 - 32570989
Alignment:
| Q |
61 |
ggttatgtatgtattataaaacataccaaagtcacgtttttgtttaaatcttgaagaaaacgaataaagaaggtttcattaggaagaatcaatctaaaag |
160 |
Q |
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| T |
32570843 |
ggttatgtatgtattataaaacataccaaagtcacgtttttgtttaaatcttgaagaaaacgaataaagaaggtttcattaggaagaatcaatctaaaag |
32570942 |
T |
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| Q |
161 |
cttattttgcatgagataggaagcatcaaggaaaaggtgatgataat |
207 |
Q |
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| T |
32570943 |
cttattttgcatgagataggaagcatcaaggaaaaggtgatgataat |
32570989 |
T |
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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 32570783 - 32570814
Alignment:
| Q |
1 |
aacaaagaagaatcaggaacagggtttgttat |
32 |
Q |
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| T |
32570783 |
aacaaagaagaatcaggaacagggtttgttat |
32570814 |
T |
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