View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17271_low_2 (Length: 718)

Name: NF17271_low_2
Description: NF17271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17271_low_2
NF17271_low_2
[»] chr1 (50 HSPs)
chr1 (316-701)||(41857484-41857869)
chr1 (7-230)||(41857190-41857416)
chr1 (126-230)||(34047284-34047388)
chr1 (126-230)||(50249308-50249412)
chr1 (126-229)||(29567894-29567997)
chr1 (129-229)||(14373463-14373563)
chr1 (129-229)||(25487089-25487189)
chr1 (126-230)||(34032129-34032233)
chr1 (126-229)||(12591132-12591235)
chr1 (146-229)||(25560922-25561005)
chr1 (126-229)||(46554796-46554899)
chr1 (126-207)||(9915441-9915522)
chr1 (126-229)||(39477758-39477860)
chr1 (126-207)||(15823032-15823113)
chr1 (126-207)||(38531369-38531450)
chr1 (126-230)||(12484677-12484781)
chr1 (127-223)||(26595125-26595221)
chr1 (126-229)||(31798587-31798691)
chr1 (126-194)||(44258592-44258660)
chr1 (129-206)||(24884416-24884493)
chr1 (126-223)||(52024290-52024387)
chr1 (126-229)||(5463573-5463677)
chr1 (128-208)||(46271388-46271468)
chr1 (126-229)||(16757244-16757347)
chr1 (134-229)||(27208995-27209090)
chr1 (126-223)||(49468766-49468864)
chr1 (133-207)||(50094234-50094308)
chr1 (133-230)||(27720963-27721060)
chr1 (126-207)||(32807010-32807091)
chr1 (126-207)||(44108597-44108678)
chr1 (126-206)||(1740714-1740794)
chr1 (134-194)||(14593405-14593465)
chr1 (126-230)||(26352130-26352234)
chr1 (126-229)||(26755218-26755321)
chr1 (126-229)||(48025303-48025407)
chr1 (146-230)||(49402920-49403004)
chr1 (126-228)||(18794593-18794694)
chr1 (126-200)||(30292938-30293012)
chr1 (163-229)||(31699339-31699405)
chr1 (133-207)||(40717368-40717442)
chr1 (129-230)||(33622414-33622515)
chr1 (126-179)||(38947653-38947706)
chr1 (126-207)||(46045971-46046052)
chr1 (131-208)||(46286889-46286966)
chr1 (134-203)||(52125212-52125281)
chr1 (126-218)||(7191268-7191360)
chr1 (126-208)||(44557115-44557197)
chr1 (133-229)||(24611569-24611666)
chr1 (126-207)||(35848005-35848086)
chr1 (126-207)||(48009008-48009089)
[»] chr7 (47 HSPs)
chr7 (126-230)||(42285906-42286010)
chr7 (126-229)||(8603973-8604076)
chr7 (133-230)||(37502324-37502421)
chr7 (126-230)||(715912-716016)
chr7 (129-229)||(10476137-10476237)
chr7 (126-229)||(24133180-24133283)
chr7 (129-230)||(31929909-31930010)
chr7 (126-230)||(6747225-6747328)
chr7 (126-230)||(12977735-12977839)
chr7 (126-222)||(48843550-48843646)
chr7 (126-207)||(24680126-24680207)
chr7 (129-230)||(25440873-25440974)
chr7 (126-230)||(34274792-34274896)
chr7 (126-230)||(44567090-44567194)
chr7 (126-229)||(40753478-40753581)
chr7 (133-230)||(18270582-18270680)
chr7 (126-223)||(33682527-33682624)
chr7 (126-223)||(34012159-34012256)
chr7 (126-230)||(18292333-18292437)
chr7 (126-229)||(1031153-1031256)
chr7 (126-207)||(13405199-13405280)
chr7 (126-203)||(29531011-29531088)
chr7 (126-207)||(37815722-37815803)
chr7 (128-219)||(40927163-40927251)
chr7 (126-207)||(45948702-45948783)
chr7 (126-229)||(4268609-4268713)
chr7 (126-218)||(19105062-19105154)
chr7 (129-229)||(30312459-30312559)
chr7 (126-223)||(27947556-27947654)
chr7 (129-207)||(44453136-44453214)
chr7 (126-207)||(1741989-1742070)
chr7 (126-229)||(22297994-22298098)
chr7 (147-229)||(31418562-31418645)
chr7 (133-208)||(37490789-37490864)
chr7 (126-223)||(42879989-42880087)
chr7 (126-207)||(23935420-23935500)
chr7 (126-187)||(24780398-24780459)
chr7 (133-229)||(29636276-29636373)
chr7 (161-229)||(8293118-8293186)
chr7 (126-206)||(27935765-27935845)
chr7 (126-230)||(33939783-33939887)
chr7 (126-229)||(35777817-35777921)
chr7 (126-229)||(2297036-2297144)
chr7 (126-229)||(21819282-21819384)
chr7 (126-228)||(40339457-40339559)
chr7 (153-223)||(41137753-41137824)
chr7 (133-207)||(48684728-48684802)
[»] chr6 (24 HSPs)
chr6 (126-229)||(9940646-9940749)
chr6 (126-230)||(4850546-4850650)
chr6 (126-218)||(18737153-18737245)
chr6 (126-217)||(29399944-29400035)
chr6 (126-229)||(32193700-32193803)
chr6 (134-229)||(17552299-17552392)
chr6 (126-229)||(24163765-24163869)
chr6 (126-229)||(31233677-31233780)
chr6 (147-229)||(3988795-3988877)
chr6 (134-207)||(12063584-12063657)
chr6 (126-229)||(234032-234136)
chr6 (133-228)||(12322939-12323032)
chr6 (126-229)||(23259376-23259480)
chr6 (126-229)||(577059-577162)
chr6 (133-207)||(19674985-19675059)
chr6 (133-207)||(29713480-29713554)
chr6 (126-207)||(31443519-31443601)
chr6 (127-208)||(13503919-13504002)
chr6 (133-228)||(12459371-12459466)
chr6 (129-207)||(24556002-24556080)
chr6 (126-203)||(10520717-10520794)
chr6 (127-187)||(1502833-1502893)
chr6 (157-215)||(17267673-17267731)
chr6 (126-223)||(32429282-32429379)
[»] chr5 (36 HSPs)
chr5 (126-230)||(43584427-43584532)
chr5 (126-230)||(10344983-10345087)
chr5 (129-229)||(36164888-36164988)
chr5 (126-230)||(3024982-3025086)
chr5 (132-229)||(34534364-34534460)
chr5 (129-229)||(3306060-3306161)
chr5 (129-230)||(4630866-4630967)
chr5 (126-230)||(7317026-7317130)
chr5 (126-230)||(25362851-25362955)
chr5 (126-229)||(39566181-39566285)
chr5 (127-229)||(15167063-15167164)
chr5 (153-219)||(21195404-21195470)
chr5 (126-207)||(26660753-26660834)
chr5 (126-207)||(26932346-26932427)
chr5 (126-229)||(34208945-34209052)
chr5 (126-207)||(42104137-42104218)
chr5 (126-229)||(2729837-2729941)
chr5 (126-229)||(13761555-13761659)
chr5 (129-208)||(27797782-27797861)
chr5 (127-218)||(38362200-38362291)
chr5 (147-208)||(27600418-27600479)
chr5 (126-229)||(39504720-39504825)
chr5 (129-229)||(42661991-42662091)
chr5 (133-229)||(11977593-11977689)
chr5 (126-229)||(14161952-14162056)
chr5 (126-229)||(34446078-34446182)
chr5 (126-207)||(6518974-6519055)
chr5 (133-229)||(8336460-8336557)
chr5 (133-229)||(14620545-14620642)
chr5 (126-203)||(21319388-21319465)
chr5 (126-207)||(21375725-21375806)
chr5 (126-186)||(24280991-24281051)
chr5 (126-186)||(24381161-24381221)
chr5 (126-229)||(38369871-38369973)
chr5 (129-223)||(40776633-40776728)
chr5 (133-187)||(39729964-39730018)
[»] chr8 (38 HSPs)
chr8 (126-230)||(15160497-15160601)
chr8 (126-229)||(39463257-39463360)
chr8 (131-229)||(36921360-36921458)
chr8 (126-230)||(40362433-40362537)
chr8 (129-223)||(12339712-12339807)
chr8 (126-207)||(4760632-4760713)
chr8 (126-203)||(44713532-44713609)
chr8 (126-230)||(43724379-43724484)
chr8 (133-229)||(5295458-5295554)
chr8 (126-229)||(14234267-14234373)
chr8 (126-230)||(37559584-37559688)
chr8 (130-219)||(29312255-29312344)
chr8 (153-229)||(34156559-34156636)
chr8 (126-207)||(39698740-39698821)
chr8 (126-222)||(6116064-6116160)
chr8 (126-229)||(9880552-9880656)
chr8 (126-230)||(39765911-39766014)
chr8 (126-206)||(43448714-43448794)
chr8 (126-229)||(6374412-6374514)
chr8 (126-229)||(45358946-45359049)
chr8 (133-203)||(35356312-35356382)
chr8 (129-229)||(514875-514978)
chr8 (126-223)||(9812171-9812268)
chr8 (129-223)||(43084684-43084779)
chr8 (133-223)||(13496240-13496330)
chr8 (148-230)||(17655927-17656009)
chr8 (126-230)||(396265-396369)
chr8 (126-203)||(4989476-4989553)
chr8 (126-207)||(29025820-29025901)
chr8 (126-229)||(7839456-7839560)
chr8 (126-202)||(9304712-9304788)
chr8 (126-229)||(17920954-17921058)
chr8 (153-228)||(19438261-19438337)
chr8 (147-229)||(31899299-31899382)
chr8 (143-229)||(13368000-13368086)
chr8 (157-229)||(19574416-19574489)
chr8 (126-191)||(31693711-31693776)
chr8 (153-229)||(34796732-34796806)
[»] chr4 (50 HSPs)
chr4 (126-230)||(22220414-22220518)
chr4 (126-230)||(25231173-25231277)
chr4 (126-229)||(10573210-10573313)
chr4 (126-207)||(2493100-2493181)
chr4 (126-229)||(20448037-20448141)
chr4 (126-229)||(45043643-45043747)
chr4 (126-230)||(51733549-51733653)
chr4 (126-229)||(52848109-52848213)
chr4 (126-229)||(8971040-8971143)
chr4 (131-230)||(21864438-21864537)
chr4 (131-230)||(21920299-21920398)
chr4 (126-229)||(30261257-30261360)
chr4 (126-228)||(40345403-40345506)
chr4 (126-230)||(52915597-52915701)
chr4 (126-229)||(4505335-4505437)
chr4 (126-229)||(37624554-37624657)
chr4 (143-230)||(38510300-38510387)
chr4 (126-229)||(47817736-47817839)
chr4 (126-219)||(27943611-27943705)
chr4 (126-207)||(1819560-1819641)
chr4 (126-207)||(24940877-24940958)
chr4 (126-203)||(41920391-41920468)
chr4 (129-229)||(52162107-52162205)
chr4 (126-229)||(19878646-19878750)
chr4 (126-229)||(52957845-52957949)
chr4 (142-229)||(25123782-25123869)
chr4 (129-208)||(34316223-34316302)
chr4 (126-204)||(19451292-19451370)
chr4 (133-230)||(7906051-7906148)
chr4 (126-225)||(40837128-40837228)
chr4 (126-229)||(19930712-19930816)
chr4 (126-229)||(37654408-37654511)
chr4 (126-229)||(44571920-44572024)
chr4 (126-229)||(50203074-50203175)
chr4 (126-229)||(54042238-54042342)
chr4 (131-229)||(620233-620332)
chr4 (126-229)||(34413603-34413706)
chr4 (126-207)||(40010951-40011033)
chr4 (126-229)||(27653674-27653776)
chr4 (126-203)||(50623081-50623158)
chr4 (133-180)||(2728502-2728550)
chr4 (126-202)||(31917954-31918030)
chr4 (133-193)||(39982108-39982168)
chr4 (129-229)||(46392118-46392217)
chr4 (126-229)||(49089462-49089565)
chr4 (126-217)||(24157183-24157274)
chr4 (157-206)||(47774865-47774915)
chr4 (127-229)||(56460082-56460186)
chr4 (126-207)||(29519603-29519684)
chr4 (126-203)||(52253843-52253923)
[»] chr3 (41 HSPs)
chr3 (126-215)||(48901718-48901807)
chr3 (126-215)||(48903284-48903373)
chr3 (126-230)||(42571577-42571681)
chr3 (126-230)||(50038219-50038323)
chr3 (126-229)||(11393543-11393647)
chr3 (126-230)||(19115385-19115488)
chr3 (126-230)||(31583482-31583586)
chr3 (126-229)||(30934858-30934958)
chr3 (126-207)||(47895415-47895496)
chr3 (126-228)||(2458005-2458108)
chr3 (126-228)||(30426373-30426476)
chr3 (126-229)||(45213770-45213874)
chr3 (126-229)||(50646159-50646262)
chr3 (126-223)||(4392194-4392291)
chr3 (126-223)||(30315307-30315404)
chr3 (126-230)||(42886749-42886851)
chr3 (126-207)||(50088387-50088468)
chr3 (126-218)||(4758989-4759081)
chr3 (126-229)||(38016373-38016476)
chr3 (127-223)||(38140949-38141045)
chr3 (126-228)||(3152855-3152958)
chr3 (126-229)||(42071983-42072086)
chr3 (126-205)||(44676219-44676298)
chr3 (126-208)||(11019896-11019978)
chr3 (133-229)||(30431125-30431222)
chr3 (126-207)||(47137961-47138042)
chr3 (129-229)||(9189484-9189584)
chr3 (126-229)||(32492229-32492333)
chr3 (153-229)||(40487853-40487929)
chr3 (142-229)||(36844791-36844878)
chr3 (133-203)||(36729885-36729955)
chr3 (126-223)||(19373584-19373681)
chr3 (126-203)||(33194106-33194183)
chr3 (126-203)||(41850388-41850465)
chr3 (126-229)||(35557806-35557910)
chr3 (127-219)||(8817139-8817232)
chr3 (126-229)||(22857088-22857191)
chr3 (126-225)||(47823504-47823603)
chr3 (153-207)||(23525387-23525441)
chr3 (154-223)||(27067634-27067703)
chr3 (126-207)||(39356883-39356964)
[»] chr2 (45 HSPs)
chr2 (128-229)||(45423618-45423719)
chr2 (127-230)||(5717512-5717614)
chr2 (126-229)||(4658285-4658388)
chr2 (126-229)||(43427339-43427442)
chr2 (126-230)||(4051754-4051859)
chr2 (126-223)||(12566038-12566135)
chr2 (126-223)||(18579165-18579262)
chr2 (134-223)||(27964428-27964517)
chr2 (126-230)||(35799201-35799304)
chr2 (126-229)||(7028864-7028967)
chr2 (129-229)||(42004892-42004993)
chr2 (126-230)||(17695876-17695980)
chr2 (126-218)||(36685803-36685895)
chr2 (126-229)||(38926604-38926708)
chr2 (126-229)||(18719484-18719587)
chr2 (126-230)||(28072565-28072672)
chr2 (126-229)||(8540036-8540139)
chr2 (126-229)||(12342091-12342195)
chr2 (126-230)||(22620385-22620489)
chr2 (126-229)||(29396731-29396835)
chr2 (128-223)||(30855105-30855200)
chr2 (126-229)||(37038821-37038921)
chr2 (126-218)||(45301763-45301855)
chr2 (126-228)||(7042239-7042341)
chr2 (133-223)||(9391616-9391706)
chr2 (133-230)||(16463083-16463180)
chr2 (126-191)||(25383574-25383639)
chr2 (126-203)||(35046516-35046593)
chr2 (126-203)||(36177974-36178051)
chr2 (135-223)||(45081957-45082046)
chr2 (126-229)||(6220455-6220559)
chr2 (126-202)||(34546410-34546486)
chr2 (126-230)||(27986034-27986140)
chr2 (126-204)||(16807594-16807672)
chr2 (126-204)||(16846875-16846953)
chr2 (126-207)||(441305-441386)
chr2 (126-229)||(43480921-43481026)
chr2 (126-170)||(777768-777812)
chr2 (126-229)||(11132548-11132652)
chr2 (126-229)||(29411694-29411797)
chr2 (126-186)||(43971502-43971562)
chr2 (126-193)||(4133022-4133089)
chr2 (133-228)||(11188545-11188640)
chr2 (126-208)||(4469499-4469581)
chr2 (126-179)||(17703017-17703071)
[»] scaffold0332 (1 HSPs)
scaffold0332 (126-230)||(3861-3965)
[»] scaffold0565 (2 HSPs)
scaffold0565 (126-224)||(9697-9796)
scaffold0565 (126-229)||(10006-10110)
[»] scaffold0502 (1 HSPs)
scaffold0502 (129-229)||(623-723)
[»] scaffold0026 (1 HSPs)
scaffold0026 (129-228)||(4141-4241)
[»] scaffold0983 (1 HSPs)
scaffold0983 (126-223)||(744-841)
[»] scaffold0110 (1 HSPs)
scaffold0110 (126-207)||(24814-24895)
[»] scaffold0015 (1 HSPs)
scaffold0015 (129-229)||(21132-21233)
[»] scaffold2107 (1 HSPs)
scaffold2107 (129-205)||(589-665)
[»] scaffold0182 (1 HSPs)
scaffold0182 (133-229)||(18306-18402)
[»] scaffold0294 (1 HSPs)
scaffold0294 (133-207)||(3578-3652)
[»] scaffold0300 (1 HSPs)
scaffold0300 (133-229)||(4570-4666)


Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-123; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 316 - 701
Target Start/End: Original strand, 41857484 - 41857869
Alignment:
Q  316 taaaaactttaaacgaggtaaatttcaaaaggaggaagtaatacttatattatatggtaggtaagttgtgcaaaa-ccgtcatttcaagttataaaaaat 414  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  41857484 taaaaactttaaacgatgtaaatttcaaaaggaggaagtaatacttatattatatggtaggtaagttgtgcaaaacccctcatttcaagttataaaaaat 41857583  T
Q  415 ctcaacttatcatgcctacacttgcctttgcatgacnnnnnnnnnnnnnnnnnnnnacttattgactttaaggagtaaattcattttaagggaaaaatat 514  Q
    ||||||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||||||||||||||||||||    
T  41857584 ctcaacttatcatgcctacacttgcctttgcatgacttttttctttcaaattttttacttattgactttaaggagtaaattcattttaagggaaaaatat 41857683  T
Q  515 ttaatcactaacttannnnnnngaggggaatcataactagcttatttgataaaataaaaaatttcataaactgcattgaataaaacgttta---nnnnnn 611  Q
    |||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||             
T  41857684 ttaatcactaacttatttttttgaggggaatcatcactagcttatttgataaaataaaaaatttcataaactgcattgaataaaatgtttatattttttt 41857783  T
Q  612 nnggaaattgaatgaaacggtttcataataaatagtaaaatcagatgatcattaacactgctctgcttcacttaattgaaaccagcaaga 701  Q
      ||||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41857784 ttggaaattgaatgaaacggtttcataataaa---taaaatcagatgatcatt-acactgctctgcttcacttaattgaaaccagcaaga 41857869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 41857190 - 41857416
Alignment:
Q  7 tcgaagaatatgcaaaagtgtctttgtgtgttacaacggaaaaaccaaacaaacgtttagatgaagccaaacacatctactcttccgtttcaaaacgagt 106  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41857190 tcgaaaaatgtgcaaaagtgtctttgtgtgttacaacggaaaaaccaaacaaacgtttagatgaagccaaacgcatctactcttccgtttcaaaacgagt 41857289  T
Q  107 gtcactttaat--nnnnnnnnttgttttaaaatgaacgtca-ttttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    |||||||||||          |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41857290 gtcactttaataaaaaaaaaattgttttaaaatgaacgtcatttttcattttccaatacaataataatttttctttttcaattataccctctaattaata 41857389  T
Q  204 ctatacacactacttccaaattattac 230  Q
    |||| ||||||||||||||||||||||    
T  41857390 ctatgcacactacttccaaattattac 41857416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 34047388 - 34047284
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||| | |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| ||||||||||||||||| |    
T  34047388 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctacacactacttccaaaat 34047289  T
Q  226 attac 230  Q
    |||||    
T  34047288 attac 34047284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 50249308 - 50249412
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| |    
T  50249308 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttgcacactacttccaaagt 50249407  T
Q  226 attac 230  Q
    |||||    
T  50249408 attac 50249412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 29567894 - 29567997
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||| |||||||||||||| |    
T  29567894 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaaagt 29567993  T
Q  226 atta 229  Q
    ||||    
T  29567994 atta 29567997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 14373563 - 14373463
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||||||| |||||||||| |||||||||||| ||||| ||||  ||||||||||||||||| |||||||| | | |||||||||| |||| ||||    
T  14373563 ttttaaaatgaatgtcattttcagtttccaatgcaacaataactttttattttcaattataccctccaattaataatctgcacactactttcaaagtatt 14373464  T
Q  229 a 229  Q
    |    
T  14373463 a 14373463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 25487089 - 25487189
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| ||||    
T  25487089 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagtatt 25487188  T
Q  229 a 229  Q
    |    
T  25487189 a 25487189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 34032233 - 34032129
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||||||||  ||||||||| |||| || |||||||||| | ||| ||||||||||| |    
T  34032233 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccgtccaattaatactttgcacgctacttccaaagt 34032134  T
Q  226 attac 230  Q
    |||||    
T  34032133 attac 34032129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 12591235 - 12591132
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| ||| | |||||||||||||||||| ||||  ||||||||| ||||||| ||||||||||   |||||||||| ||||||    
T  12591235 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactcagcacactactttcaaatt 12591136  T
Q  226 atta 229  Q
    ||||    
T  12591135 atta 12591132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 25561005 - 25560922
Alignment:
Q  146 ttttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||||| |||||||||||||||||||||||  |||||||||||||| |  ||||||||||||| |||||||||||||| |||||    
T  25561005 ttttcagtttccaatgcaataataattttttcttttcaattatacctttcaattaatactatatacactacttccaaaatatta 25560922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 46554796 - 46554899
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| ||||  |||| |||||| ||||||||||| ||||  ||||||||| ||||||  ||||||||||||| |||||||||||||| |    
T  46554796 ttgttttaaaatgaatgtcaccttcagtttccactgcaataataactttttattttcaattgtacccttcaattaatactatatacactacttccaaagt 46554895  T
Q  226 atta 229  Q
    ||||    
T  46554896 atta 46554899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 9915441 - 9915522
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  9915441 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatactat 9915522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 39477860 - 39477758
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||| | |||| ||| | ||||||||||||||||||||||| |||||||||| ||| ||  ||||||||||||| ||||||||||| || |    
T  39477860 ttgttttaaaatggatgtcacttttaatttccaatgcaataataattttt-tttttcaattgtacacttcaattaatactatatacactacttcctaagt 39477762  T
Q  226 atta 229  Q
    ||||    
T  39477761 atta 39477758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 15823032 - 15823113
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  15823032 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat 15823113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 38531450 - 38531369
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||||||||| |||||||||||||||||||||||  ||||||||||| ||||  |||| |||||||    
T  38531450 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatgcccttcaattgatactat 38531369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 12484781 - 12484677
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| ||||||||  |||||||||||| ||||| ||||||||| ||||  ||||||| | ||||||| |||||||| ||  ||||||||||||||| |    
T  12484781 ttgtttcaaaatgaatttcattttcatttgccaatacaataataactttttcttttcaactgtaccctccaattaatattaggcacactacttccaaagt 12484682  T
Q  226 attac 230  Q
    |||||    
T  12484681 attac 12484677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 26595221 - 26595125
Alignment:
Q  127 tgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||||||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| |||| |  ||||||||||||| |||||| |||||||    
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttcttttcaattgtaccattcaattaatactatatacactatttccaaa 26595125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 31798587 - 31798691
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| ||||||||||||| ||||| ||||| || ||||||||| ||||  |||||||||||||| | |||||||||||||   ||||||||||||||     
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttcttttcaattataccttttaattaatactatgttacactacttccaaag 31798686  T
Q  225 tatta 229  Q
    |||||    
T  31798687 tatta 31798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 44258660 - 44258592
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctc 194  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||  ||||||||| |||||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctc 44258592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 24884416 - 24884493
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatacta 206  Q
    ||||||||| || |||| ||||| |||||||||||||||||| ||||  ||||||||||||||||  |||||||||||    
T  24884416 ttttaaaataaatgtcactttcaatttccaatgcaataataactttttattttcaattatacccttcaattaatacta 24884493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 52024387 - 52024290
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| ||||| || || ||||||| ||| |||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||| |||||||    
T  52024387 ttgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttcttttcaattgtaccctccaattaatactttgcacactatttccaaa 52024290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 5463573 - 5463677
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| ||||||||||||| |||| ||||  ||||||||| ||| || |||||||||||||   ||||||||||||||     
T  5463573 ttgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttcttttcaattgtacactttaattaatactatgttacactacttccaaaa 5463672  T
Q  225 tatta 229  Q
    |||||    
T  5463673 tatta 5463677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 46271468 - 46271388
Alignment:
Q  128 gttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata 208  Q
    |||| |||||||| |||||||||| ||||||||| |||||||||||||  |||||||| |||| ||  |||||||||||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataattttttattttcaataatacacttcaattaatactata 46271388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 16757347 - 16757244
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||| | |||| ||||| |||||||||||||||||| || |  ||||||||| ||||||  ||||||||||||| |||| |||| |||| |    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattcttttcaattgtacccttcaattaatactatatacacaactttcaaagt 16757248  T
Q  226 atta 229  Q
    ||||    
T  16757247 atta 16757244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 27208995 - 27209090
Alignment:
Q  134 aaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    ||||||| |||| ||||  |||||||||||||||||| ||||  ||||||||| |||| |  |||||||| |||| |||||||||||||| |||||    
T  27208995 aaatgaatgtcactttcggtttccaatgcaataataactttttattttcaattgtaccattcaattaatattatatacactacttccaaagtatta 27209090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 49468864 - 49468766
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata-cacactacttccaaa 223  Q
    |||||| |||||||| || | ||||| ||||||||||||||||||  |||  ||||||||| ||||||  |||||||||||||  ||||||||||||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttcttttcaattgtacccttcaattaatactatattacactacttccaaa 49468766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 50094234 - 50094308
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  50094234 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat 50094308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 27720963 - 27721060
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    |||||||| |||| ||||| ||| ||||  |||||||| ||||  ||||||||| ||||||| ||||||||||   ||||||||||||||| ||||||    
T  27720963 aaaatgaatgtcactttcagttttcaatataataataactttttcttttcaattgtaccctccaattaatactcagcacactacttccaaagtattac 27721060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 32807091 - 32807010
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  || |||||||||    
T  32807091 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaaataatactat 32807010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 44108597 - 44108678
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||||||| || |||| ||||| |||||||| ||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactat 44108678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 1740794 - 1740714
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatacta 206  Q
    ||||||||||||||| |||| ||||| ||||||||| |||||||| ||||  ||||||||| |||| |  |||||||||||    
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataactttttattttcaattgtaccattcaattaatacta 1740714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 14593465 - 14593405
Alignment:
Q  134 aaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctc 194  Q
    ||||||| |||| ||||| |||||||||||||||||||||||  ||||||||| |||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctc 14593405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 26352234 - 26352130
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||| | ||| |||||||||||||| ||||  ||||||||| ||||||| ||||||||||   ||| |||||| |||| |    
T  26352234 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactcagcacgctactttcaaagt 26352135  T
Q  226 attac 230  Q
    |||||    
T  26352134 attac 26352130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 26755218 - 26755321
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata-cacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| |||||||| || |||||| ||||  ||||||||| ||||||  ||||||||||||  |||||||||||||||     
T  26755218 ttgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttcttttcaatt-tacccttcaattaatactatgtcacactacttccaaag 26755316  T
Q  225 tatta 229  Q
    |||||    
T  26755317 tatta 26755321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 48025407 - 48025303
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||  |||||||||||||||||| ||||   |||||||| ||||||  ||||||||||||   ||||||||||||||     
T  48025407 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcgtttcaattgtacccttcaattaatactatgttacactacttccaaag 48025308  T
Q  225 tatta 229  Q
    |||||    
T  48025307 tatta 48025303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 49403004 - 49402920
Alignment:
Q  146 ttttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    |||||| |||||||||||||||||| ||||  ||||||||| ||| ||| |||||||| | | |||| |||||||||| ||||||    
T  49403004 ttttcagtttccaatgcaataataactttttcttttcaattgtactctccaattaatattttgcacattacttccaaagtattac 49402920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 18794694 - 18794593
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||| || ||||||| || |||| ||||||||||||| ||||  |||||| ||  |||||  |||||||| |||| |||||||||||||| |    
T  18794694 ttgttttaaaataaatgtcattt-cagtttcgaatgcaataataactttttcttttcagttgcacccttcaattaatattatatacactacttccaaaat 18794596  T
Q  226 att 228  Q
    |||    
T  18794595 att 18794593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 30292938 - 30293012
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaatta 200  Q
    ||||||||||||||| | || ||||| |||||||||||||||||| |||  |||||||| | ||||||| |||||    
T  30292938 ttgttttaaaatgaatgccactttcagtttccaatgcaataataactttgttttttcaactgtaccctccaatta 30293012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 31699405 - 31699339
Alignment:
Q  163 aataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||||||||||||  ||||||||| ||||||  ||||||||||||| ||| |||||||||| |||||    
T  31699405 aataataattttttcttttcaattgtacccttcaattaatactataaacattacttccaaaatatta 31699339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 40717442 - 40717368
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||  ||||||| | ||||||  ||||||||||||    
T  40717442 aaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaactgtacccttcaattaatactat 40717368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 33622515 - 33622414
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||||||| |||||||||  ||| |||||||||||||| |||   ||||||||| ||| || || |||||| |||  |||||||||| ||| ||||    
T  33622515 ttttaaaatgaatgtcattttcgattttcaatgcaataataactttatcttttcaattgtactctttagttaatattatgtacactacttctaaagtatt 33622416  T
Q  229 ac 230  Q
    ||    
T  33622415 ac 33622414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 38947653 - 38947706
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttcttt 179  Q
    ||||||||||||||| |||| ||||| | ||||||||||||||| |||||||||    
T  38947653 ttgttttaaaatgaatgtcactttcagtatccaatgcaataatattttttcttt 38947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 46045971 - 46046052
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||| ||| | |||||||||||| ||||  ||||||||||||||||   |||||||||||    
T  46045971 ttgtttcaaaatgaatgtcactttcagttttcgatgcaataataactttttattttcaattatacccttcgattaatactat 46046052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 46286966 - 46286889
Alignment:
Q  131 ttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata 208  Q
    |||||| ||| |||| ||||||||| |||||||||||||| ||||  |||||||||  |||||  |||||||||||||    
T  46286966 ttaaaaagaatgtcactttcatttttcaatgcaataataactttttcttttcaattgcacccttcaattaatactata 46286889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 52125281 - 52125212
Alignment:
Q  134 aaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    ||||||| |||| ||||| |||||||||||||||||||||||  || |||||| ||||||  ||||||||    
T  52125281 aaatgaatgtcaatttcagtttccaatgcaataataattttttattctcaattgtacccttcaattaata 52125212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 7191360 - 7191268
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactactt 218  Q
    |||||||||||| || |||| ||||  ||| | ||| |||||||| ||||  |||||||||||||| |  ||||||||||||| |||||||||    
T  7191360 ttgttttaaaataaatgtcactttcgattttctatgtaataataactttttcttttcaattatacctttcaattaatactatatacactactt 7191268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 44557197 - 44557115
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata 208  Q
    ||||||||||||||| |||| ||||| | ||||||||||||||||  |||  ||||||||| |||| |  ||||||| |||||    
T  44557197 ttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttcttttcaattgtaccattcaattaatgctata 44557115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 24611666 - 24611569
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaattatta 229  Q
    |||||||| |||| ||| | |||| |||| |||||||| ||||  ||||||||| ||||||  ||||||||||||   |||||||||||||| |||||    
T  24611666 aaaatgaatgtcacttttagtttctaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtatta 24611569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 35848086 - 35848005
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| ||| |||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| |||| |  ||||||||||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttcttttcaattgtacctttcaattaatactat 35848005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 48009008 - 48009089
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| | |||||| | |||  ||||||||||||| ||||  ||||||||| |||| |  ||||||||||||    
T  48009008 ttgttttaaaatgaatggcatttttagtttttaatgcaataataactttttcttttcaattgtaccgttcaattaatactat 48009089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 42285906 - 42286010
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||  |||||||||||| ||||| ||||||||| |    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatgcacacaacttccaaagt 42286005  T
Q  226 attac 230  Q
    |||||    
T  42286006 attac 42286010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 8603973 - 8604076
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||  |||||||| |||||||  ||||||||||||| |||||||||||||| |    
T  8603973 ttgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttcttttcaatgatacccttcaattaatactatatacactacttccaaagt 8604072  T
Q  226 atta 229  Q
    ||||    
T  8604073 atta 8604076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 37502324 - 37502421
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| ||||||    
T  37502324 aaaatgaacgtcactttcagtttccaatgcaataataactttttcttttcaattttaccctccaattaatactctgcacactacttccaaaatattac 37502421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 716016 - 715912
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||||||||  ||||||||| ||||||| |||||||||| | | ||||||||||||| |    
T  716016 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaatactctgctcactacttccaaagt 715917  T
Q  226 attac 230  Q
    |||||    
T  715916 attac 715912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 10476137 - 10476237
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||| |||||||||||||| ||||    
T  10476137 ttttaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaaagtatt 10476236  T
Q  229 a 229  Q
    |    
T  10476237 a 10476237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 24133283 - 24133180
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||  ||||||||||||| | ||||| |||||| |    
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatatatactacatccaaaat 24133184  T
Q  226 atta 229  Q
    ||||    
T  24133183 atta 24133180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 31930010 - 31929909
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    ||||||||||||  | ||||||| ||| |||||||||||||||||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| ||||    
T  31930010 ttttaaaatgaatattattttcagttttcaatgcaataataattttttcttttcaattgtaccctccaattaatactttgcacactacttccaaagtatt 31929911  T
Q  229 ac 230  Q
    ||    
T  31929910 ac 31929909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 6747225 - 6747328
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||| ||| |||| ||||| |||||||||||||||||| |||||||||| |||| ||||||| |||||||||| | ||||||||||||||| |    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataacttttcttttt-aattgtaccctccaattaatactctgcacactacttccaaagt 6747323  T
Q  226 attac 230  Q
    |||||    
T  6747324 attac 6747328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 12977839 - 12977735
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| |||| || |||||||||| | ||||||||||||||| |    
T  12977839 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaatactctgcacactacttccaaagt 12977740  T
Q  226 attac 230  Q
    |||||    
T  12977739 attac 12977735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 48843550 - 48843646
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaa 222  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||||||||  | ||||||||||||||  | ||||||||||| |||||||||||||    
T  48843550 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctcttcaattatacccttaatttaatactatatacactacttccaa 48843646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 24680126 - 24680207
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||||  ||||||||| |||||| |||||||| ||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctttaattaatgctat 24680207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 25440873 - 25440974
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||||  | |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| ||||    
T  25440873 ttttaaaatatatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagtatt 25440972  T
Q  229 ac 230  Q
    ||    
T  25440973 ac 25440974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 34274792 - 34274896
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| ||||||||||||||||||  |||||||||| |||| ||||||| |||||||||| |||||||||| ||||||     
T  34274792 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttcttttt-aattgtaccctccaattaatactctacacactacatccaaag 34274890  T
Q  225 tattac 230  Q
    ||||||    
T  34274891 tattac 34274896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 44567194 - 44567090
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| || | || |||||||||| | ||||||||||||||| |    
T  44567194 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttcttttcaattgtatcatccaattaatactttgcacactacttccaaagt 44567095  T
Q  226 attac 230  Q
    |||||    
T  44567094 attac 44567090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 40753581 - 40753478
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||| ||||||||| |||||||||| ||| ||||| |||||||||||||  ||||||||| |||| |  ||||||||||||| ||||||||| |||| |    
T  40753581 ttgttataaaatgaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtaccattcaattaatactatatacactactttcaaagt 40753482  T
Q  226 atta 229  Q
    ||||    
T  40753481 atta 40753478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 18270582 - 18270680
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    |||||||| |||| ||||| |||||||||||||||||| ||||||  |||||||| ||||||| |||||||| | | ||||||||||||||| ||||||    
T  18270582 aaaatgaatgtcactttcagtttccaatgcaataataactttttcactttcaattgtaccctccaattaatattctgcacactacttccaaagtattac 18270680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 33682527 - 33682624
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| |||| || ||||| |||||  || |||||||||||||||||||| ||||||||| ||||||  |||||||||| || ||||||||||||||    
T  33682527 ttgtttcaaaaagaccgtcactttcaagtttcaatgcaataataatttttccttttcaattttacccttcaattaatactttatacactacttccaaa 33682624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 34012159 - 34012256
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    ||||||||||||||| |||| ||| | ||||||||| | |||||| |||| |||||||||| ||||||  ||||||||||||| | ||||||||||||    
T  34012159 ttgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttttttttcaattgtacccttcaattaatactatataaactacttccaaa 34012256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 18292333 - 18292437
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||   |||||||| || | || |||||||||| | ||||||||||||||| |    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcctttcaattgtatcatccaattaatactctgcacactacttccaaagt 18292432  T
Q  226 attac 230  Q
    |||||    
T  18292433 attac 18292437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 1031153 - 1031256
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| ||||  |||| |||||| |||||||||||  |||  ||||||||| ||| ||  ||||||||||||| ||||||||||||||||    
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataacattttattttcaattgtactcttcaattaatactatatacactacttccaaatt 1031252  T
Q  226 atta 229  Q
    ||||    
T  1031253 atta 1031256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 13405280 - 13405199
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| |||| ||||| ||||||||| |||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactat 13405199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 29531088 - 29531011
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    ||||||| ||||||| |||||||||| ||| |||||||||||||||||||  ||||||||| ||||||  ||||||||    
T  29531088 ttgttttgaaatgaatgtcattttcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaata 29531011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 37815722 - 37815803
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||  ||||| |||||||| ||||||||||||||  ||||||||||||||||  ||||||||||||    
T  37815722 ttgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttcttttcaattatacccttcaattaatactat 37815803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 40927163 - 40927251
Alignment:
Q  128 gttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttc 219  Q
    |||| |||||||| |||| ||||| |||||||||||||||||| ||   |||||||||||||||||| ||| |||||| | |||||||||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataactt---tttttcaattataccctccaatcaatactctgcacactacttc 40927251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 45948783 - 45948702
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  45948783 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat 45948702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 4268609 - 4268713
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttct-ttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    |||||| |||||||| |||  ||||| ||||||||| ||||||| ||||| | ||||||||| |||| || ||||||||||||| | | |||||||||||    
T  4268609 ttgtttcaaaatgaatgtcgctttcaatttccaatgtaataatattttttttgttttcaattgtaccttccaattaatactatatatattacttccaaat 4268708  T
Q  225 tatta 229  Q
    |||||    
T  4268709 tatta 4268713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 19105154 - 19105062
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactactt 218  Q
    ||||||||||||||| |||| ||||| |||  ||||||||||||| ||||  ||||||||| ||||||  ||||||||||||| ||| |||||    
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacattactt 19105062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 30312459 - 30312559
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||||||| |||| ||||  ||| |||| ||||||||||||||  ||||||||| ||||||  |||||||| | || |||||||||||||| ||||    
T  30312459 ttttaaaatgaatgtcactttcggttttcaatacaataataattttttcttttcaattgtacccttcaattaatattgtatacactacttccaaagtatt 30312558  T
Q  229 a 229  Q
    |    
T  30312559 a 30312559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 27947654 - 27947556
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatac-acactacttccaaa 223  Q
    |||| |||||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||  |||||||| ||| | ||||||||||||||    
T  27947654 ttgtcttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatattatgctacactacttccaaa 27947556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 44453136 - 44453214
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||| ||||||| |||| ||||| |||||||||||||||||| |||  |||||||||| ||||||  ||||||||||||    
T  44453136 tttttaaatgaatgtcactttcagtttccaatgcaataataactttcttttttcaattgtacccttcaattaatactat 44453214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 1741989 - 1742070
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||| ||||||||||||||||||  |||  ||||||||| ||||||  ||||||||||||    
T  1741989 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttcttttcaattgtacccttcaattaatactat 1742070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 22297994 - 22298098
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||| | ||||||  | ||||||||||   ||||||||||||||     
T  22297994 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaactgtacccttcagttaatactatgttacactacttccaaag 22298093  T
Q  225 tatta 229  Q
    |||||    
T  22298094 tatta 22298098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 31418645 - 31418562
Alignment:
Q  147 tttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaattatta 229  Q
    ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||   |||||||||||||| |||||    
T  31418645 tttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtatta 31418562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 37490789 - 37490864
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata 208  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||| |||| |  |||||||||||||    
T  37490789 aaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtacctttcaattaatactata 37490864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 42880087 - 42879989
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaa 223  Q
    |||||| |||||||| |||| ||||| ||| ||||| |||||||| ||||  ||||||||| ||||||  ||||||||||||   ||||||||||||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaa 42879989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 23935420 - 23935500
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||||||| || ||| |||||| |||||||||||||||||| ||||  ||||||| | ||||||  ||||||||||||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttcttttcaa-tgtacccttcaattaatactat 23935500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 24780459 - 24780398
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaatta 187  Q
    |||||| |||||||| |||| ||||| |||| ||||||||||||||||||  ||||||||||    
T  24780459 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttattttcaatta 24780398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 29636373 - 29636276
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataattt-ttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    ||||| || |||| ||||| |||| ||||||||||||| || || ||||||||||| | |||  ||||||||||||| |||||||||| ||| |||||    
T  29636373 aaaataaatgtcactttcagtttctaatgcaataataacttcttttttttcaattacatccttcaattaatactatatacactacttctaaagtatta 29636276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 8293186 - 8293118
Alignment:
Q  161 gcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||||||||| ||||  ||||||||| || | | ||||||||| |||| ||||||||||||||||||||    
T  8293186 gcaataataactttttattttcaattgtatcttttaattaatattatatacactacttccaaattatta 8293118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 27935765 - 27935845
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatacta 206  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||| ||||  | ||||||| || | | ||||||||||||    
T  27935765 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttatcttcaattgtatcatttaattaatacta 27935845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 33939887 - 33939783
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| |||   ||||||||| |||||||| ||||  ||| ||||| |||| |  |||||||| |||| |||||| ||||||| |    
T  33939887 ttgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctttccaattgtaccattcaattaatattatatacactaattccaaagt 33939788  T
Q  226 attac 230  Q
    |||||    
T  33939787 attac 33939783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 35777817 - 35777921
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata-cacactacttccaaat 224  Q
    |||||| ||||| || |||| ||||  |||| ||||||||||||| ||||  ||||||||| ||||||  ||||| |||||||  ||||||||||||||     
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataactttttattttcaattgtacccttcaattagtactatattacactacttccaaag 35777916  T
Q  225 tatta 229  Q
    |||||    
T  35777917 tatta 35777921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 2297036 - 2297144
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataata-atttttctt----tttcaattataccctctaattaatactatacacactacttcc 220  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||  ||||||||    |||||| | |||| || |||||||||| | ||||||||||||    
T  2297036 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttcttttaatttcaactgtaccatccaattaatactctgcacactacttcc 2297135  T
Q  221 aaattatta 229  Q
    ||| |||||    
T  2297136 aaaatatta 2297144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 21819282 - 21819384
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| || ||||||| ||| |||| ||||||||| || | |||||||||| || | |  ||||||||||||| ||| |||||||||| |    
T  21819282 ttgtttcaaaatgaaagttattttcagttttcaatacaataataaattct-tttttcaattgtatcattcaattaatactatatacattacttccaaaat 21819380  T
Q  226 atta 229  Q
    ||||    
T  21819381 atta 21819384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 40339457 - 40339559
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatacta-tacacactacttccaaat 224  Q
    |||||| |||||||  |||| ||||| ||| ||||||||||||||  ||| |||||||||| ||||||  |||||||| || || ||||||||||||||     
T  40339457 ttgtttcaaaatgactgtcactttcaattttcaatgcaataataa-ctttatttttcaattgtacccttcaattaatattattatacactacttccaaag 40339555  T
Q  225 tatt 228  Q
    ||||    
T  40339556 tatt 40339559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 41137753 - 41137824
Alignment:
Q  153 tttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaa 223  Q
    |||||||||||||||||||||||  ||||||||| ||||||  |||| |||||||   ||||||||||||||    
T  41137753 tttccaatgcaataataattttttcttttcaattgtacccttcaattgatactatgttacactacttccaaa 41137824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 48684728 - 48684802
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||| |||| ||||  |||||||||||||||||| ||||  ||||||||| |||| |  ||||||||||||    
T  48684728 aaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacctttcaattaatactat 48684802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 9940646 - 9940749
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||  |||| ||||| ||| |||||||||||||| ||||||||||||||| ||||||  |||||||| ||||||||||||||||||| |    
T  9940646 ttgttttaaaatgattgtcactttcagttttcaatgcaataataacttttctttttcaattgtacccttcaattaatattatacacactacttccaaaat 9940745  T
Q  226 atta 229  Q
    ||||    
T  9940746 atta 9940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 4850650 - 4850546
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| |||| || |||||||||| | ||||||||||||||| |    
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaatactctgcacactacttccaaaat 4850551  T
Q  226 attac 230  Q
    |||||    
T  4850550 attac 4850546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 18737245 - 18737153
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactactt 218  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||| | ||  |||||||||||||||| ||||||||| |||| |||||||||    
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttcttttcaattataccctttaattaatattatatacactactt 18737153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 29399944 - 29400035
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactact 217  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||||||||  ||||||||| ||||||| |||||||||| | |||||||||    
T  29399944 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaatactctgcacactact 29400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 32193700 - 32193803
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||| || |||| ||| | |||| ||||||||||||||||||  ||||||||| ||||||  ||||||||||||| |||||||||||||| |    
T  32193700 ttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatactatatacactacttccaaagt 32193799  T
Q  226 atta 229  Q
    ||||    
T  32193800 atta 32193803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 17552392 - 17552299
Alignment:
Q  134 aaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    ||||||| |||||||||| |||||||||||||||||  |||| |||||||||| ||   | |||||||||||||| |||||||||||||| |||||    
T  17552392 aaatgaatgtcattttcagtttccaatgcaataata--ttttttttttcaattgtaatttttaattaatactatatacactacttccaaaatatta 17552299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 24163869 - 24163765
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||  ||||||||| |||  |  ||||||||||||   ||||||||||||||     
T  24163869 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacatttcaattaatactatgttacactacttccaaag 24163770  T
Q  225 tatta 229  Q
    |||||    
T  24163769 tatta 24163765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 31233780 - 31233677
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| ||||| ||| || |||||||||||| |||  ||||||||| ||||||  |||| |||||| ||| |||||||||||| |    
T  31233780 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 31233681  T
Q  226 atta 229  Q
    ||||    
T  31233680 atta 31233677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 3988877 - 3988795
Alignment:
Q  147 tttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| | |||| ||| ||| |||||    
T  3988877 tttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatatatactatttcaaaagtatta 3988795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 12063657 - 12063584
Alignment:
Q  134 aaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||| |||| ||||| ||||||||||||||||||||||| |||||||||| ||||||  |||| |||||||    
T  12063657 aaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtacccttcaattgatactat 12063584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 234032 - 234136
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||| | |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  234032 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 234131  T
Q  225 tatta 229  Q
    |||||    
T  234132 tatta 234136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 12323032 - 12322939
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||| |||| ||||| |||||||||||||||||  |||| | ||||||||  |||||  ||||||||||||| |||||||||||||| ||||    
T  12323032 aaaatgaatgtcactttcagtttccaatgcaataata--ttttttatttcaattgcacccttcaattaatactatatacactacttccaaagtatt 12322939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 23259480 - 23259376
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||||||||| |||||||||||| ||||| ||||  ||||||||| ||||||  |||||||| |||   ||||||||||||||     
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataacttttacttttcaattgtacccttaaattaatattatgttacactacttccaaag 23259381  T
Q  225 tatta 229  Q
    |||||    
T  23259380 tatta 23259376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 577059 - 577162
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||| |   ||| ||||| ||| |||||||||||||| |||    |||||||||||||||  |||||||| |||| ||||||||||||||||    
T  577059 ttgttttaaaataactatcactttcagttttcaatgcaataataactttatcatttcaattatacccttcaattaatattatatacactacttccaaatt 577158  T
Q  226 atta 229  Q
    ||||    
T  577159 atta 577162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 19674985 - 19675059
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||| |||||||||| |||||||||||||||||| ||||  ||||||||| |||| |  ||||||||||||    
T  19674985 aaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccattcaattaatactat 19675059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 29713554 - 29713480
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||| |||||||||  |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  29713554 aaaatgaatgtcattttccgtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat 29713480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 31443601 - 31443519
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| || ||||||| |||||||||||||||||| ||||| |||||||||| |||| |  ||||||||||||    
T  31443601 ttgtttaaaaatgaatgttattttcagtttccaatgcaataataactttttttttttcaattgtacctttcaattaatactat 31443519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 13504002 - 13503919
Alignment:
Q  127 tgttttaaaatgaacgtcattttcattttccaatgcaataataa--tttttctttttcaattataccctctaattaatactata 208  Q
    ||||| |||||||| |||| ||||| ||||||||||||||||||  ||||| | |||||||| ||||||  |||||||||||||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttttttatttcaattgtacccttcaattaatactata 13503919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 12459466 - 12459371
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||| |||| ||||  |||| ||| ||||||||  ||||  ||||||||||||||||  ||||||||||||| ||| |||||||||| ||||    
T  12459466 aaaatgaatgtcactttcggtttctaatacaataatatctttttcttttcaattatacccttcaattaatactatatacattacttccaaagtatt 12459371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 24556080 - 24556002
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||| || |||||||||| ||| ||||| |||||||||||||  ||||||||| ||| ||  ||||||||||||    
T  24556080 ttttaaaataaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtactcttcaattaatactat 24556002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 10520794 - 10520717
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    |||||||||||| || |||| ||||| ||| |||| ||||||||||||||  ||||||||| ||||||  ||||||||    
T  10520794 ttgttttaaaataaatgtcactttcaattttcaatacaataataattttttcttttcaattgtacccttcaattaata 10520717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 1502893 - 1502833
Alignment:
Q  127 tgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaatta 187  Q
    ||||||||||| || |||||||||| |||||||||||||| ||||| ||  ||||||||||    
T  1502893 tgttttaaaattaatgtcattttcagtttccaatgcaatagtaattatttcttttcaatta 1502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 17267731 - 17267673
Alignment:
Q  157 caatgcaataataatttttctttttcaattataccctctaattaatactatacacacta 215  Q
    |||||||||||||||||||  ||||||| | |||||| ||||||||| |||| ||||||    
T  17267731 caatgcaataataattttttcttttcaactgtaccctttaattaatattatatacacta 17267673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 32429282 - 32429379
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| |||| ||| |||| ||| | |||||||||||||||||| ||||  ||||||||| || | || |||||||| | | |||||||||| ||||    
T  32429282 ttgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttcttttcaattgtatcatccaattaatattctgcacactactttcaaa 32429379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 5e-24; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 43584532 - 43584427
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttct-ttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    ||||||||||||||| ||| |||||| ||| |||||||||||||| |||| | ||||||||||||||||| |||||||||| | |||||||||||||||     
T  43584532 ttgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttttcttttcaattataccctccaattaatactctgcacactacttccaaaa 43584433  T
Q  225 tattac 230  Q
    ||||||    
T  43584432 tattac 43584427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 10345087 - 10344983
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| |    
T  10345087 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 10344988  T
Q  226 attac 230  Q
    |||||    
T  10344987 attac 10344983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 36164888 - 36164988
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||||||| |||||||||| ||||||||||| |||||| ||||  ||||||||||||||||  ||||||||||||| ||| |||||||||| ||||    
T  36164888 ttttaaaatgaatgtcattttcagtttccaatgcagtaataactttttcttttcaattatacccttcaattaatactatatacattacttccaaaatatt 36164987  T
Q  229 a 229  Q
    |    
T  36164988 a 36164988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 3025086 - 3024982
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||| | |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| | |||| |||||||||| |    
T  3025086 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacattacttccaaagt 3024987  T
Q  226 attac 230  Q
    |||||    
T  3024986 attac 3024982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 34534364 - 34534460
Alignment:
Q  132 taaaatgaacgtcattttcattttccaatgcaataataatttttct-ttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    ||||||||| |||| |||||||  |||||||||||||||||||| | ||||||||| ||||||  |||||||||||| ||||||||||||||| |||||    
T  34534364 taaaatgaatgtcactttcatt--ccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgcacactacttccaaaatatta 34534460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 3306161 - 3306060
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaattat 227  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||||  ||||||||| ||||||  |||||||||| |   |||||||||||||| |||    
T  3306161 ttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactctgttacactacttccaaagtat 3306062  T
Q  228 ta 229  Q
    ||    
T  3306061 ta 3306060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 4630866 - 4630967
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    ||||||||| || |||| ||||| ||| |||| ||||||||| ||||  ||||||||| || |||| |||||||||| ||||||||||||||||| ||||    
T  4630866 ttttaaaataaatgtcactttcagttttcaatacaataataactttttcttttcaattgtatcctccaattaatactttacacactacttccaaagtatt 4630965  T
Q  229 ac 230  Q
    ||    
T  4630966 ac 4630967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 7317026 - 7317130
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| | || |||| || |||| |    
T  7317026 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcaaactattttcaaagt 7317125  T
Q  226 attac 230  Q
    |||||    
T  7317126 attac 7317130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 25362955 - 25362851
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| || | ||||| |||| ||||||||||| | ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| |    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttcttttcaattttaccctccaattaatactctgcacactacttccaaagt 25362856  T
Q  226 attac 230  Q
    |||||    
T  25362855 attac 25362851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 39566181 - 39566285
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  |||||||| |||   ||||||||||||||     
T  39566181 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaataatatgttacactacttccaaag 39566280  T
Q  225 tatta 229  Q
    |||||    
T  39566281 tatta 39566285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 15167164 - 15167063
Alignment:
Q  127 tgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatta 226  Q
    ||||| |||||||| |||| ||||| ||| |||||||||||||| |||| |||||||||| ||| ||  ||||| ||||||| |||||||||||||| ||    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt-tttttcaattttactcttcaattattactatatacactacttccaaaata 15167066  T
Q  227 tta 229  Q
    |||    
T  15167065 tta 15167063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 21195404 - 21195470
Alignment:
Q  153 tttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttc 219  Q
    |||||||||||||||||||||||  ||||||||| ||||||  ||||||||||||| ||||||||||    
T  21195404 tttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatatacactacttc 21195470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 26660753 - 26660834
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat 26660834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 26932346 - 26932427
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat 26932427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 34209052 - 34208945
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaat---gcaataataatttttctttttcaattataccctctaattaatactata-cacactacttcca 221  Q
    |||||| |||||||| |||| ||||| ||||||||   |||||||||| |||| |||||||||||||||||  |||||||| ||||  ||||||||||||    
T  34209052 ttgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttttttttcaattatacccttcaattaatattatattacactacttcca 34208953  T
Q  222 aattatta 229  Q
    || |||||    
T  34208952 aaatatta 34208945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 42104218 - 42104137
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattttacccttcaattaatactat 42104137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 2729941 - 2729837
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  |||||| |||||   ||||||||||||||     
T  2729941 ttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaaaactatgttacactacttccaaag 2729842  T
Q  225 tatta 229  Q
    |||||    
T  2729841 tatta 2729837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 13761555 - 13761659
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 13761654  T
Q  225 tatta 229  Q
    |||||    
T  13761655 tatta 13761659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 27797782 - 27797861
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata 208  Q
    |||||||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  | |||||||||||    
T  27797782 ttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcagttaatactata 27797861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 38362291 - 38362200
Alignment:
Q  127 tgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactactt 218  Q
    ||||| |||||||| |||| ||||| ||| |||||||||||||| ||||| |||||||||||||||   |||||||||| || | |||||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttttccttttcaattatacccataaattaatactttatatactactt 38362200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 27600418 - 27600479
Alignment:
Q  147 tttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata 208  Q
    ||||| |||||||||||||||||| ||||  ||||||||||||||||  |||||||||||||    
T  27600418 tttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaatactata 27600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 39504720 - 39504825
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaa-taataatttttctttttcaattataccctctaattaatactat-acacactacttccaaa 223  Q
    ||||||||||||||| |||| ||||| |||||||||||| |||||| ||||  ||||||||| || ||| ||||||||| |||   ||||||||||||||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttcttttcaattgtatcctttaattaatattatgttacactacttccaaa 39504819  T
Q  224 ttatta 229  Q
     |||||    
T  39504820 atatta 39504825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 42662091 - 42661991
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaattat 227  Q
    |||||||||||| || ||||| | ||| ||||| ||||||||||||| |||||||||| ||||||  ||||||||||||   |||||||||||||| |||    
T  42662091 ttttaaaatgaatgttatttttagttttcaatgtaataataattttt-tttttcaattgtacccttcaattaatactatgttacactacttccaaagtat 42661993  T
Q  228 ta 229  Q
    ||    
T  42661992 ta 42661991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 11977593 - 11977689
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||| ||| |||| ||||| |||||||| | ||||||| ||||  ||||||||| || ||| ||||||||| |||| |||||||||||||| |||||    
T  11977593 aaaacgaatgtcactttcagtttccaataccataataactttttcttttcaattgtatcctttaattaatattatatacactacttccaaagtatta 11977689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 14162056 - 14161952
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaatta-taccctctaattaatactatacacactacttccaaat 224  Q
    |||| ||||||| || ||||||||   |||| ||||||||||||||||||  |||||||||  |||| |  ||||||||||||| ||||||||||||||     
T  14162056 ttgtattaaaataaatgtcattttaggtttctaatgcaataataattttttcttttcaatttgtaccattcaattaatactatatacactacttccaaag 14161957  T
Q  225 tatta 229  Q
    |||||    
T  14161956 tatta 14161952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 34446182 - 34446078
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||||||||| ||| |||| |||||||||  |||  ||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  34446182 ttgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 34446083  T
Q  225 tatta 229  Q
    |||||    
T  34446082 tatta 34446078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 6518974 - 6519055
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||  ||||| ||| |||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat 6519055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 8336557 - 8336460
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaattatta 229  Q
    |||||||| |||| || |||||| |||||||||||||| || | |||||||||| ||| ||  ||||||||||||   |||||||||||||| |||||    
T  8336557 aaaatgaatgtcacttccatttttcaatgcaataataacttctttttttcaattgtactcttcaattaatactatgttacactacttccaaaatatta 8336460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 14620642 - 14620545
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaattatta 229  Q
    |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| |||| |  |||||||| |||   |||||||||||||| |||||    
T  14620642 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacctttcaattaatattatgttacactacttccaaagtatta 14620545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 21319465 - 21319388
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    |||||| |||||||| |||| |||||  ||||||||||||||||| ||||  ||||||||| ||||||  ||||||||    
T  21319465 ttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttcttttcaattgtacccttcaattaata 21319388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 21375806 - 21375725
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||||||| || |||| ||||| ||| |||||||| |||  ||||| |||||||||| ||||||  ||||||||||||    
T  21375806 ttgttttaaaataaatgtcactttcagttttcaatgcaaaaattttttttttttttcaattgtacccttcaattaatactat 21375725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 24280991 - 24281051
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaatt 186  Q
    |||||| |||||||| |||| ||| | |||||||||||||||||||||||  |||||||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaatt 24281051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 24381221 - 24381161
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaatt 186  Q
    |||||| |||||||| |||| ||| | |||||||||||||||||||||||  |||||||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaatt 24381161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 38369871 - 38369973
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||||||  ||| ||| |||| ||||||||||||||| ||||  |||| |||| ||| ||  |||||||| |||| ||||||||| |||| |    
T  38369871 ttgttttaaaatgaatatcacttttattt-ccaatgcaataataactttttcttttaaattgtactcttcaattaatattatatacactactttcaaagt 38369969  T
Q  226 atta 229  Q
    ||||    
T  38369970 atta 38369973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 40776728 - 40776633
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttc-aattataccctctaattaatactatacacactacttccaaa 223  Q
    ||||||| |||| |||| ||||||||| ||||| |||||||| |||| | |||| |||| ||||||| ||||||||   | |||||||||||||||    
T  40776728 ttttaaattgaatgtcactttcatttttcaatgtaataataacttttttatttccaattgtaccctccaattaatatgttgcacactacttccaaa 40776633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 39729964 - 39730018
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaatta 187  Q
    |||||||| || ||||||| |||||||||||||||||| ||||  ||||||||||    
T  39729964 aaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaatta 39730018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 15160601 - 15160497
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| |    
T  15160601 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaaat 15160502  T
Q  226 attac 230  Q
    |||||    
T  15160501 attac 15160497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 39463257 - 39463360
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||| |||||||||||||| |    
T  39463257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaaagt 39463356  T
Q  226 atta 229  Q
    ||||    
T  39463357 atta 39463360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 36921360 - 36921458
Alignment:
Q  131 ttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||  ||||||||| |||| || |||||||||| | |||| ||||||||||||||||    
T  36921360 ttaaaatgaacgtcactttcaattttcaatgcaataataattttttcttttcaattgtaccttccaattaatactctgcacattacttccaaattatta 36921458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 40362433 - 40362537
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||| |||||||||| | |||||||| |||||| |    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattttaccctccaattaatactctgcacactacgtccaaaat 40362532  T
Q  226 attac 230  Q
    |||||    
T  40362533 attac 40362537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 12339712 - 12339807
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttcttttt-caattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||||||||| |||||||| | ||| |||| |||||||||||||||||||| ||||| ||| ||| |||||||| |||||||||||||||||||    
T  12339712 ttttaaaatgaatgtcatttttagttttcaatacaataataatttttctttttccaattgtacactccaattaatagtatacacactacttccaaa 12339807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 4760713 - 4760632
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||  ||||||||| ||||||  ||||||||||||    
T  4760713 ttgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttcttttcaattgtacccttcaattaatactat 4760632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 44713532 - 44713609
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    |||||||||||||||  ||| |||||||||||||||||||||||| |||| |||||||||||||||||  ||||||||    
T  44713532 ttgttttaaaatgaatatcactttcattttccaatgcaataataacttttttttttcaattatacccttcaattaata 44713609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 43724379 - 43724484
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttcttt-ttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    |||||| ||||||||  ||| ||||| ||||||||||||||||||||||| ||| ||||||| |||| || |||||||||| | ||||||||||||| |     
T  43724379 ttgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttcttcaattgtaccttccaattaatactctgcacactacttccataa 43724478  T
Q  225 tattac 230  Q
    ||||||    
T  43724479 tattac 43724484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 5295554 - 5295458
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||||||| |||| ||| | |||| ||||||||||||||||||  ||||||||| ||||||  |||||||| |||| |||||||||||||| |||||    
T  5295554 aaaatgaatgtcactttaagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatattatatacactacttccaaaatatta 5295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 14234373 - 14234267
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctcta---attaatactatacacactacttccaa 222  Q
    ||||||||||||||| |||| ||| | |||| |||||||||||||| ||| |||||||||| |||||| ||   | |||||||||| |||||||||||||    
T  14234373 ttgttttaaaatgaatgtcacttttaatttctaatgcaataataatatttttttttcaattgtaccctttagttaataatactatatacactacttccaa 14234274  T
Q  223 attatta 229  Q
    | |||||    
T  14234273 aatatta 14234267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 37559688 - 37559584
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||| || |||| ||||| |||||||| ||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||| || |||| |    
T  37559688 ttgttttaaaatcaatgtcactttcagtttccaatacaataataactttttcttttcaattgtaccctccaattaatactctgcacactattttcaaagt 37559589  T
Q  226 attac 230  Q
    |||||    
T  37559588 attac 37559584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 29312344 - 29312255
Alignment:
Q  130 tttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttc 219  Q
    ||||||||||| |||||||||| ||||||||||||||||||   ||  ||||||||| ||| ||  ||||||||||||| ||||||||||    
T  29312344 tttaaaatgaatgtcattttcagtttccaatgcaataataaccgtttgttttcaattgtactcttcaattaatactatatacactacttc 29312255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 34156559 - 34156636
Alignment:
Q  153 tttccaatgcaataataatttttct-ttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    ||||||||||||||||||||||| | ||||||||| ||||||  ||||||||||||  |||||||||||||| |||||    
T  34156559 tttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgtacactacttccaaaatatta 34156636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 39698821 - 39698740
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  39698821 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat 39698740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 6116160 - 6116064
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaa 222  Q
    |||||||||||||||  ||| ||||  ||| |||||||||||||| ||||  ||||||||||||||||    ||||||||||| |||||||||||||    
T  6116160 ttgttttaaaatgaatatcactttcggttttcaatgcaataataactttttcttttcaattatacccttcgtttaatactatatacactacttccaa 6116064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 9880656 - 9880552
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| |  || |||||||||||||||||||||||  ||||||||||| ||||  ||||||||||||   ||||||||||||||     
T  9880656 ttgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttcttttcaattatgcccttcaattaatactatgttacactacttccaaag 9880557  T
Q  225 tatta 229  Q
    |||||    
T  9880556 tatta 9880552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 39766014 - 39765911
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||| ||||  |||||| |  ||||||| |||||||||| | ||||||||||||||| |    
T  39766014 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcactg-taccctccaattaatactctgcacactacttccaaagt 39765916  T
Q  226 attac 230  Q
    |||||    
T  39765915 attac 39765911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 43448714 - 43448794
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatacta 206  Q
    |||||| ||||||||  ||| ||||| |||||||||||||||||| |||| |||||||||| ||||||  |||||||||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttttttttcaattgtacccttcaattaatacta 43448794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 6374412 - 6374514
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| |||| || |||||||| |||| ||| |||||||||| |    
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccttc-aattaatattatatacattacttccaaagt 6374510  T
Q  226 atta 229  Q
    ||||    
T  6374511 atta 6374514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 45359049 - 45358946
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||  |||||||||| ||| |||||||||||||||||||  ||||||||| ||   |  |||||||| |||| |||||||||||||| |    
T  45359049 ttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttcttttcaattgtatttttcaattaatattatatacactacttccaaagt 45358950  T
Q  226 atta 229  Q
    ||||    
T  45358949 atta 45358946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 35356312 - 35356382
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    ||||||||  ||||||||| |||||||||||||||||| ||||  ||||||||||||||||  ||||||||    
T  35356312 aaaatgaatatcattttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaata 35356382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 514875 - 514978
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaat---taatactatacacactacttccaaatt 225  Q
    |||||||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||| || |||  |||   |||||||||| ||||||||||| || |    
T  514875 ttttaaaatgaatgtcactttcaattttcaatgcaataataattttttcttttcaattgtatccttcaattaataatactatatacactacttccgaagt 514974  T
Q  226 atta 229  Q
    ||||    
T  514975 atta 514978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 9812171 - 9812268
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    ||||||||||||||| |||| ||||| |||| ||||||||||||| ||||  ||||||||| |||| |  || ||||| |||| ||||||||| ||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttattttcaattgtacctttcaagtaatattatatacactactttcaaa 9812268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 43084779 - 43084684
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaa 223  Q
    |||||||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| |||| |  ||||||||||||   ||||||||||||||    
T  43084779 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacactacttccaaa 43084684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 13496240 - 13496330
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||||| || ||||||| ||||||||||||||||||  |||  ||||||||| |||  |  |||||||||| || ||||||||||||||    
T  13496240 aaaatgaatgttattttcaatttccaatgcaataataacgttttcttttcaattgtacaattcaattaatactgtatacactacttccaaa 13496330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 17655927 - 17656009
Alignment:
Q  148 ttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    |||| ||| |||||||||||||| ||||  ||||||| | ||||||| |||||||||| | |||||||||| |||| ||||||    
T  17655927 ttcagttttcaatgcaataataactttttcttttcaactgtaccctccaattaatactctgcacactacttgcaaagtattac 17656009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 396369 - 396265
Alignment:
Q  126 ttgttttaaaatgaacgtca-ttttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    ||||||||||||||| |||| |||||| |||  ||||||||||||| ||||  ||||||||| ||||||| |||||||||| | |||| | |||||| |     
T  396369 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttcttttcaattgtaccctc-aattaatactttgcacattgcttccatag 396271  T
Q  225 tattac 230  Q
    ||||||    
T  396270 tattac 396265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 4989476 - 4989553
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    |||||| ||||||||  ||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||    
T  4989476 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaata 4989553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 29025901 - 29025820
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||| ||| |||| ||| | |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  29025901 ttgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttcttttcaattctacccttcaattaatactat 29025820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 7839456 - 7839560
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| ||||||||||||||||||  |||  ||||||||| |||| |  |||||||| |||   ||||||||||||||     
T  7839456 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttcttttcaattttacctttcaattaatattatgttacactacttccaaaa 7839555  T
Q  225 tatta 229  Q
    |||||    
T  7839556 tatta 7839560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 9304788 - 9304712
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaat 202  Q
    |||||| |||||||| || | ||| | |||||||||||||||||||||||  ||||||||| ||||||  |||||||    
T  9304788 ttgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttcttttcaattgtacccttcaattaat 9304712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 17920954 - 17921058
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||| ||||  ||| ||||| ||| ||  |||||||| |||   ||||||||||||||     
T  17920954 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctttacaattgtactcttcaattaatattatgttacactacttccaaag 17921053  T
Q  225 tatta 229  Q
    |||||    
T  17921054 tatta 17921058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 19438261 - 19438337
Alignment:
Q  153 tttccaatgcaataataatttttctttttcaattataccctctaattaatactata-cacactacttccaaattatt 228  Q
    ||||||||| |||||||| ||||  ||||||||| ||||||  |||||||||||||  |||||||||||||| ||||    
T  19438261 tttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatatt 19438337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 31899382 - 31899299
Alignment:
Q  147 tttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaattatta 229  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||| ||  |||||||| |||   |||||||||||||| |||||    
T  31899382 tttcagtttccaatgcaataataattttttcttttcaattgtactcttcaattaatattatgttacactacttccaaagtatta 31899299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 13368086 - 13368000
Alignment:
Q  143 tcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    ||||| ||| ||||||| ||||||||||  |||  |||||||||  |||||  |||||||| |||| |||||||||||||| |||||    
T  13368086 tcattatcaatttccaacgcaataataacattttcttttcaattgcacccttcaattaatattatatacactacttccaaagtatta 13368000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 19574416 - 19574489
Alignment:
Q  157 caatgcaataataatttttctttttcaattataccctctaattaatactata-cacactacttccaaattatta 229  Q
    ||||| |||||||| ||||  ||||||||| ||||||  |||||||||||||  |||||||||||||| |||||    
T  19574416 caatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatatta 19574489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 31693776 - 31693711
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattatacc 191  Q
    |||||||||||||||  ||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||    
T  31693776 ttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacc 31693711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 34796806 - 34796732
Alignment:
Q  153 tttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||| ||||||||||||||||||  |||||||||  |||||  |||||||  |||| |||||||||||||| |||||    
T  34796806 tttctaatgcaataataattttttcttttcaattgaacccttcaattaat--tatatacactacttccaaagtatta 34796732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 22220518 - 22220414
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| ||||| || |||||||||| ||| |||||||||||||| ||||  ||||||||| ||||||| |||||||||||| ||||||||||||||| |    
T  22220518 ttgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttcttttcaattgtaccctccaattaatactatgcacactacttccaaaat 22220419  T
Q  226 attac 230  Q
    |||||    
T  22220418 attac 22220414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 25231173 - 25231277
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||| ||||  ||||| ||| |||||| ||||||||||| |  |||||||||||||| |    
T  25231173 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttctattgtaccctataattaatactttgtacactacttccaaagt 25231272  T
Q  226 attac 230  Q
    |||||    
T  25231273 attac 25231277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 10573313 - 10573210
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||||||| | |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||| ||| |||||||||| |    
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacaatacttccaaagt 10573214  T
Q  226 atta 229  Q
    ||||    
T  10573213 atta 10573210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 2493100 - 2493181
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||||||  ||||||||| ||||||  ||||||||||||    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttcttttcaattgtacccttcaattaatactat 2493181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 20448037 - 20448141
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||||||||||  ||||||||||||   ||||||||||||||     
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattatacccttcaattaatactatgttacactacttccaaag 20448136  T
Q  225 tatta 229  Q
    |||||    
T  20448137 tatta 20448141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 45043747 - 45043643
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  45043747 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 45043648  T
Q  225 tatta 229  Q
    |||||    
T  45043647 tatta 45043643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 51733653 - 51733549
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||| ||||||||||||||||||  |||| | || ||||||| |||||||||| | ||||||||||||||| |    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctttttacttgtaccctccaattaatactctgcacactacttccaaagt 51733554  T
Q  226 attac 230  Q
    |||||    
T  51733553 attac 51733549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 52848213 - 52848109
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||  ||||||||| ||||||  |||||||| |||   ||||||||||||||     
T  52848213 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacactacttccaaag 52848114  T
Q  225 tatta 229  Q
    |||||    
T  52848113 tatta 52848109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 8971040 - 8971143
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||||| ||||| ||||| ||| ||||| |||||||||||||  ||||||||| ||| ||  |||||||| |||| |||||||||||||| |    
T  8971040 ttgttttaaaatgaccgtcactttcagttttcaatgaaataataattttttcttttcaattgtactcttcaattaataatatatacactacttccaaagt 8971139  T
Q  226 atta 229  Q
    ||||    
T  8971140 atta 8971143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 21864537 - 21864438
Alignment:
Q  131 ttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    |||||||||| || | ||||| |||||||||||||||||| ||||  ||||||||| || |||| |||||||||| | ||||||||||||||| ||||||    
T  21864537 ttaaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctgcacactacttccaaagtattac 21864438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 21920398 - 21920299
Alignment:
Q  131 ttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    |||||||||| || | ||||| |||||||||||||||||| ||||  ||||||||| || |||| |||||||||| | ||||||||||||||| ||||||    
T  21920398 ttaaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctgcacactacttccaaagtattac 21920299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 30261257 - 30261360
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| ||||||||||||||||||| |||  ||||||||| ||||||  ||||||||||||| ||| ||||| |||| |    
T  30261257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttcttttcaattgtacccttcaattaatactatatacattactttcaaagt 30261356  T
Q  226 atta 229  Q
    ||||    
T  30261357 atta 30261360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 40345506 - 40345403
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||||||||  ||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 40345407  T
Q  225 tatt 228  Q
    ||||    
T  40345406 tatt 40345403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 52915701 - 52915597
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||  ||||| |||||||||||||||||| ||||  ||||||||| || | || |||||||||| | ||||||||||||||| |    
T  52915701 ttgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttcttttcaattgtatcatccaattaatactctgcacactacttccaaagt 52915602  T
Q  226 attac 230  Q
    |||||    
T  52915601 attac 52915597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 4505335 - 4505437
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| |||||||  ||||||||| | |||||||||| |||| |    
T  4505335 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctc-cattaatactctgcacactactttcaaagt 4505433  T
Q  226 atta 229  Q
    ||||    
T  4505434 atta 4505437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 37624554 - 37624657
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| ||||| || |||| ||||| |||||||||||||||||| ||||  ||||||||| || |||| |||||||||| | ||||||||||| ||| |    
T  37624554 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctgcacactacttcaaaagt 37624653  T
Q  226 atta 229  Q
    ||||    
T  37624654 atta 37624657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 38510387 - 38510300
Alignment:
Q  143 tcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    ||||||| | ||| |||||||||||||| ||||  ||||||||| |||| || |||||||||| ||||||||||||||||| ||||||    
T  38510387 tcatttttagttttcaatgcaataataactttttcttttcaattgtaccatccaattaatactctacacactacttccaaagtattac 38510300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 47817736 - 47817839
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| ||||||||  | | ||||| ||| |||||||||||||| ||||  ||||||||| ||||||  ||||||||||||| |||||||||||||| |    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaaagt 47817835  T
Q  226 atta 229  Q
    ||||    
T  47817836 atta 47817839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 27943705 - 27943611
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataattt-ttctttttcaattataccctctaattaatactatacacactacttc 219  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||| || || |||||||||||||||||  |||||||| |||| ||||||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttcttttttttcaattatacccttcaattaatattatatacactacttc 27943611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 1819560 - 1819641
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  1819560 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatactat 1819641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 24940877 - 24940958
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||||||||  |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  24940877 ttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat 24940958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 41920468 - 41920391
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    |||||||||||| || |||||||||| ||||||| |||||||||| ||||  ||||||||||||||||  ||||||||    
T  41920468 ttgttttaaaataaatgtcattttcagtttccaaagcaataataactttttcttttcaattatacccttcaattaata 41920391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 52162107 - 52162205
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||||||| |||| ||||| ||| ||| ||||||||||||||  ||||| |||||||||||  ||||||||||| | |||||| ||||||| ||||    
T  52162107 ttttaaaatgaatgtcactttcaattttcaacgcaataataatttt--tttttgaattatacccttcaattaatactaaatacactagttccaaagtatt 52162204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 19878646 - 19878750
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  |||| |||||||   ||||||||||||||     
T  19878646 ttgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaatttatactatgttacactacttccaaag 19878745  T
Q  225 tatta 229  Q
    |||||    
T  19878746 tatta 19878750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 52957949 - 52957845
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  |||||||| |||   ||||||||||||||     
T  52957949 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttccaaag 52957850  T
Q  225 tatta 229  Q
    |||||    
T  52957849 tatta 52957845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 25123869 - 25123782
Alignment:
Q  142 gtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||||||||| ||| |||| ||||||||||||||  |||||| || ||||||  ||||||||||||| |||| ||||||||| |||||    
T  25123869 gtcattttcagttttcaatacaataataattttttcttttcagttgtacccttcaattaatactatatacacgacttccaaaatatta 25123782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 34316223 - 34316302
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata 208  Q
    ||||||||| || |||| ||||| |||||||||||||||||||||||  ||||||||| ||||||  |||||||| ||||    
T  34316223 ttttaaaataaatgtcactttcagtttccaatgcaataataattttttattttcaattgtacccttcaattaatattata 34316302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 19451370 - 19451292
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatac 204  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  |||||||||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatac 19451292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 7906148 - 7906051
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    |||||||| |||| ||||| |||||  ||||||||||| ||||  ||||||||| ||||||| |||||||||| |  ||||| |||||||| ||||||    
T  7906148 aaaatgaatgtcactttcagtttccggtgcaataataactttttcttttcaattgtaccctccaattaatactctggacactgcttccaaagtattac 7906051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 40837128 - 40837228
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctct-aattaatactat-acacactacttccaaa 223  Q
    |||||| |||||||| |||| |||||||||||||||||||||||| |||| |||||||||  |||||  | ||||||||||||   ||||||||||||||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataactttt-tttttcaatcgtacccgatcaattaatactatgttacactacttccaaa 40837226  T
Q  224 tt 225  Q
    ||    
T  40837227 tt 40837228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 19930712 - 19930816
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| ||||| |||||||||||| ||||  ||||||||| ||||||  |||||||| |||   ||||||||||||||     
T  19930712 ttgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttccaaaa 19930811  T
Q  225 tatta 229  Q
    |||||    
T  19930812 tatta 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 37654408 - 37654511
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||| || || |||||||| ||||||||| ||||  ||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  37654408 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 37654506  T
Q  225 tatta 229  Q
    |||||    
T  37654507 tatta 37654511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 44572024 - 44571920
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||  ||||| ||||||||||||||| || ||||  ||||||||| ||||||  |||||||| |||   ||||||||||||||     
T  44572024 ttgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttcttttcaattgtacccttcaattaataatatgttacactacttccaaag 44571925  T
Q  225 tatta 229  Q
    |||||    
T  44571924 tatta 44571920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 50203074 - 50203175
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| ||||| |  ||||||||||||||| ||||  ||||||||| ||||||  |||||||| |||| ||| |||||| ||| |    
T  50203074 ttgttttaaaatgaatgtcactttcagt--ccaatgcaataataactttttcttttcaattgtacccttcaattaatattatatacattacttcaaaagt 50203171  T
Q  226 atta 229  Q
    ||||    
T  50203172 atta 50203175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 54042342 - 54042238
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||| ||||  ||||||||| |||||||||||||  ||||||||| |||| |  ||||||||| ||   ||||||||||||||     
T  54042342 ttgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttcttttcaattgtacctttcaattaataccatgttacactacttccaaag 54042243  T
Q  225 tatta 229  Q
    |||||    
T  54042242 tatta 54042238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 620332 - 620233
Alignment:
Q  131 ttaaaatgaacgtcattttcattttccaatgcaataataatttttct-ttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    ||||||||||  ||| ||| | |||| |||||||||||||||||| | ||||||||| ||||||  |||||||||| || ||| |||||||||| |||||    
T  620332 ttaaaatgaatatcagtttaagtttctaatgcaataataatttttttcttttcaattgtacccttcaattaatactctatacattacttccaaagtatta 620233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 34413706 - 34413603
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| ||||| || |||| ||||| |||| ||||||||||||| ||||  ||||||||| |||| |  |||||||| |||| |||||||||| ||| |    
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataactttttattttcaattgtaccattcaattaatattatatacactacttctaaaat 34413607  T
Q  226 atta 229  Q
    ||||    
T  34413606 atta 34413603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 40011033 - 40010951
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| || | ||||| ||||||||||||||| || || || |||||||||| ||||||  ||||||||||||    
T  40011033 ttgttttaaaatgaatgttactttcagtttccaatgcaataacaacttcttttttttcaattgtacccttcaattaatactat 40010951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 27653674 - 27653776
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||||||||| || |||||||| | |||| |||||||| |||| |||  |||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  27653674 ttgttttaaaataaatgtcatttttagtttctaatgcaatgataacttt--tttttcaattgtacccttcaattaatactatgttacactacttccaaaa 27653771  T
Q  225 tatta 229  Q
    |||||    
T  27653772 tatta 27653776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 50623081 - 50623158
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    ||||||||||||| | || ||||| | ||| |||||||||||||| ||||  ||||||||||||||||  ||||||||    
T  50623081 ttgttttaaaatgtatgttatttttagttttcaatgcaataataactttttcttttcaattatacccttcaattaata 50623158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 2728550 - 2728502
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataa-tttttctttt 180  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  2728550 aaaatgaatgtcattttcagtttccaatgcaataataactttttctttt 2728502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 31917954 - 31918030
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaat 202  Q
    |||||||||||||||  ||| |||||  |||||||||||||||| |||||  ||||||||| ||||||  |||||||    
T  31917954 ttgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttcttttcaattttacccttcaattaat 31918030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 39982108 - 39982168
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccct 193  Q
    |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||    
T  39982108 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccct 39982168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 46392217 - 46392118
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    ||||||||||   |||| ||||| ||| ||| |||||||||||||||  |||||||||||||| |  |||||||| |||  |||||||||||||| ||||    
T  46392217 ttttaaaatggctgtcactttcacttttcaaagcaataataattttttcttttcaattatacctttcaattaata-tatttacactacttccaaagtatt 46392119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 49089462 - 49089565
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||| | ||| |||||||||||||| |||| |||| ||||||||||||  ||||| ||||||   ||||||||||||||     
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttt-ttttccaattatacccttcaattagtactatgttacactacttccaaag 49089560  T
Q  225 tatta 229  Q
    |||||    
T  49089561 tatta 49089565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 24157183 - 24157274
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactact 217  Q
    |||||| ||||| || |||| ||| | |||| ||||||||||||||||||  |||| |||| || ||| |||||||||||||| ||| ||||    
T  24157183 ttgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctttttaattgtatcctttaattaatactatatacattact 24157274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 47774915 - 47774865
Alignment:
Q  157 caatgcaataataat-ttttctttttcaattataccctctaattaatacta 206  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||||||||    
T  47774915 caatgcaatattaatattttttttttcaattgtaccctctaattaatacta 47774865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 56460082 - 56460186
Alignment:
Q  127 tgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaat--taatactatacacactacttccaaa 223  Q
    |||||||||||||| |||| |||||  || |||||||||| ||| ||||||||||| ||||||| |||  |||  ||||| |||| ||||||||||||||    
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttcttttt-aattatatccttcaattataatattatatacactacttccaaa 56460180  T
Q  224 ttatta 229  Q
     |||||    
T  56460181 atatta 56460186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 29519684 - 29519603
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| ||||| || |||| ||| | |||||||||||||||||| ||||  ||||||||| || |||  ||||||||||||    
T  29519684 ttgtttcaaaataaatgtcacttttagtttccaatgcaataataactttttattttcaattgtatccttcaattaatactat 29519603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 52253843 - 52253923
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttc--tttttcaattataccctctaattaata 203  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| || |||  |||||||||| ||||||  ||||||||    
T  52253843 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctttttttcaattgtacccttcaattaata 52253923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 1e-21; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 48901718 - 48901807
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacacta 215  Q
    |||||| |||||||| |||||||||| |||||||||||||||||| ||||  ||||||||| ||||||| ||||||||||||| ||||||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactatatacacta 48901807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 48903284 - 48903373
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacacta 215  Q
    |||||| |||||||| |||||||||| |||||||||||||||||| ||||  ||||||||| ||||||| ||||||||||||| ||||||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactatatacacta 48903373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 42571681 - 42571577
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| || || |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| |    
T  42571681 ttgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 42571582  T
Q  226 attac 230  Q
    |||||    
T  42571581 attac 42571577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 50038323 - 50038219
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||| ||| |    
T  50038323 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttctaaagt 50038224  T
Q  226 attac 230  Q
    |||||    
T  50038223 attac 50038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 11393543 - 11393647
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||| ||   ||||||||||||||     
T  11393543 ttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatacaatgttacactacttccaaag 11393642  T
Q  225 tatta 229  Q
    |||||    
T  11393643 tatta 11393647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 19115385 - 19115488
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||| | |||||||||||||||||| ||||  |||||||||||| |||| |||||||||| | ||||||||||||||| |    
T  19115385 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattata-cctccaattaatactctgcacactacttccaaagt 19115483  T
Q  226 attac 230  Q
    |||||    
T  19115484 attac 19115488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 31583586 - 31583482
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||| || |||| ||||| |||||| |||||||||||| |||  ||||||||| |||| || |||||||||| | ||||||||||||||| |    
T  31583586 ttgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttcttttcaattgtaccttccaattaatactctgcacactacttccaaagt 31583487  T
Q  226 attac 230  Q
    |||||    
T  31583486 attac 31583482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 30934958 - 30934858
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||||   || |||||||||||||||||||||||  ||||||||| |||||   ||||||||||||| |||||||||| ||| |    
T  30934958 ttgttttaaaatgaatgtcat---cagtttccaatgcaataataattttttcttttcaattgtacccctcaattaatactatatacactacttctaaagt 30934862  T
Q  226 atta 229  Q
    ||||    
T  30934861 atta 30934858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 47895496 - 47895415
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||||||||||  ||||||||||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattatacccttcaattaatactat 47895415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 2458005 - 2458108
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactata-cacactacttccaaa 223  Q
    |||||| |||||||| |||| ||||| |||||||| ||||||||| ||||||||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttcttttt-aattatacccttcaattaatactatattacactacttccaaa 2458103  T
Q  224 ttatt 228  Q
     ||||    
T  2458104 gtatt 2458108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 30426476 - 30426373
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactat-acacactacttccaaa 223  Q
    |||||| |||||||| |||||||||| |||||||||||||||||| ||||||||||| |||| ||||||  ||||||||||||   ||||||||||||||    
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttt-aattgtacccttcaattaatactatgttacactacttccaaa 30426378  T
Q  224 ttatt 228  Q
     ||||    
T  30426377 atatt 30426373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 45213874 - 45213770
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata-cacactacttccaaat 224  Q
    ||||||||||||||| |||| ||||| |||| ||||||||||||| ||||  ||||||||| ||||||  |||||||||||||  ||||||||| ||||     
T  45213874 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttcttttcaattgtacccttcaattaatactatattacactactttcaaag 45213775  T
Q  225 tatta 229  Q
    |||||    
T  45213774 tatta 45213770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 50646262 - 50646159
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| ||||| || |||| ||||| |||||||||||||||||| ||||  ||||||||| |||| | |||||||||||||| ||| |||||| ||| |    
T  50646262 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccatttaattaatactatatacattacttcaaaagt 50646163  T
Q  226 atta 229  Q
    ||||    
T  50646162 atta 50646159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 4392194 - 4392291
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| |||||||| |||| ||||| ||||||||  |||||||| ||||  ||||||||| ||||||  ||||||||||||| | ||||||||||||    
T  4392194 ttgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttcttttcaattgtacccttcaattaatactatatatactacttccaaa 4392291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 30315307 - 30315404
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| |||||||| |||| ||||  |||||||||||| ||||| ||||  |||| |||||||||||  ||||||||||||| ||||||||| ||||    
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttcttttgaattatacccttcaattaatactatatacactactttcaaa 30315404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 42886749 - 42886851
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| || | ||| | |||||||||||||||||| ||||  ||||||||||  ||||| |||||||| ||| ||||||||||||||| |    
T  42886749 ttgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttcttttcaatta--ccctccaattaatattatgcacactacttccaaagt 42886846  T
Q  226 attac 230  Q
    |||||    
T  42886847 attac 42886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 50088468 - 50088387
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||||||||||||||| ||| | |||||||||||||| ||| ||||  ||||||||| ||||||  ||||||||||||    
T  50088468 ttgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttcttttcaattgtacccttcaattaatactat 50088387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 4758989 - 4759081
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactactt 218  Q
    |||||||||||| || |||| ||||| |||||||||||||||||| ||||  ||||||||| |||| |  |||||||||| | ||||||||||    
T  4758989 ttgttttaaaataaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacctttcaattaatactctgcacactactt 4759081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 38016373 - 38016476
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| |||| || ||||||||||||   ||||||||||||||     
T  38016373 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccttc-aattaatactatgttacactacttccaaag 38016471  T
Q  225 tatta 229  Q
    |||||    
T  38016472 tatta 38016476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 38140949 - 38141045
Alignment:
Q  127 tgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    ||||| |||||||| |||| ||||| ||||||||||||||||||  ||| |||||  ||| | ||||  ||||||||||||| ||||||||||||||    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttttttttcattgtgcccttcaattaatactatatacactacttccaaa 38141045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 3152958 - 3152855
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  3152958 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 3152859  T
Q  225 tatt 228  Q
    ||||    
T  3152858 tatt 3152855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 42071983 - 42072086
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||| | |||||||| | |||||||||||||||||| ||||  ||||||| | ||||||  |||||||| |||| ||| |||||| ||| |    
T  42071983 ttgttttaaaatggatgtcatttttagtttccaatgcaataataactttttcttttcaactgtacccttcaattaatattatatacattacttctaaagt 42072082  T
Q  226 atta 229  Q
    ||||    
T  42072083 atta 42072086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 44676219 - 44676298
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatact 205  Q
    |||||| |||||||| |||| ||||| ||||||||||||| |||| ||||  ||||||||| ||||||| ||||||||||    
T  44676219 ttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttcttttcaattgtaccctccaattaatact 44676298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 11019978 - 11019896
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata 208  Q
    |||||||||||| || |||| ||||||||| |||||||||||||||||||  ||||||||  |||| |  |||||||||||||    
T  11019978 ttgttttaaaattaatgtcactttcatttttcaatgcaataataattttttcttttcaatcgtacctttcaattaatactata 11019896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 30431125 - 30431222
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata-cacactacttccaaattatta 229  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||  ||||||||| || |||  |||||||| ||||  |||||||||||||| |||||    
T  30431125 aaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtaaccttcaattaatattatattacactacttccaaagtatta 30431222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 47137961 - 47138042
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    ||||||||||||||| |||||||| | ||| |||||||||||||| ||||  ||||||||| ||||||  || |||||||||    
T  47137961 ttgttttaaaatgaatgtcatttttagttttcaatgcaataataactttttattttcaattgtacccttcaaataatactat 47138042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 9189584 - 9189484
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||||||| |||| ||||| ||| ||||| |||||||| ||||  ||||||| |||| | |  ||||||||||||| ||| |||||||||| ||||    
T  9189584 ttttaaaatgaatgtcactttcagttttcaatgaaataataactttttcttttcaaatatatcattcaattaatactatatacattacttccaaaatatt 9189485  T
Q  229 a 229  Q
    |    
T  9189484 a 9189484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 32492333 - 32492229
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||| ||||  |||||||||||||| |  |||||||||| |   ||||||||||||||     
T  32492333 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattataccattcaattaatactttgttacactacttccaaaa 32492234  T
Q  225 tatta 229  Q
    |||||    
T  32492233 tatta 32492229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 40487853 - 40487929
Alignment:
Q  153 tttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||||||||||||||||| ||||  ||||||||| |||| |  ||||||||||||| |||||||||| ||| |||||    
T  40487853 tttccaatgcaataataactttttcttttcaattgtacctttcaattaatactatatacactacttctaaagtatta 40487929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 36844878 - 36844791
Alignment:
Q  142 gtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||| ||||| ||| |||||||||||||||||||  ||||||||| || | |  |||||||| |||| |||||||||||||| |||||    
T  36844878 gtcactttcagttttcaatgcaataataattttttcttttcaattgtatcattcaattaatattatatacactacttccaaagtatta 36844791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 36729955 - 36729885
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||    
T  36729955 aaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaata 36729885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 19373584 - 19373681
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| |||||||  |||| ||||| ||| ||||| |||||||| ||||  ||||||||| ||||||  ||||||||  ||| ||||||||||||||    
T  19373584 ttgtttcaaaatgactgtcactttcaattttcaatgaaataataactttttattttcaattgtacccttcaattaatatcatatacactacttccaaa 19373681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 33194183 - 33194106
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    ||||||||||||||| |||| ||||| ||||||||||||| |||| ||||  |||| |||| ||||||  ||||||||    
T  33194183 ttgttttaaaatgaatgtcactttcagtttccaatgcaatgataactttttatttttaattgtacccttcaattaata 33194106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 41850388 - 41850465
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    ||||||||||||||| | || ||| | |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||    
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaata 41850465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 35557910 - 35557806
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||  |  ||| ||||| |||||||||||||||||||||||  ||||||||| |||| |  ||||| ||||||   ||||||||||||||     
T  35557910 ttgttttaaaatatatatcactttcagtttccaatgcaataataattttttcttttcaattgtacctttcaattattactatgttacactacttccaaag 35557811  T
Q  225 tatta 229  Q
    |||||    
T  35557810 tatta 35557806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 8817139 - 8817232
Alignment:
Q  127 tgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaatta--atactatacacactacttc 219  Q
    |||||||||||||| || ||||||| ||  ||||||||||||||||||| |  ||||||| |||| | ||||||  ||| |||||||||||||||    
T  8817139 tgttttaaaatgaatgttattttcagttatcaatgcaataataattttt-tccttcaattgtaccttttaattaatatattatacacactacttc 8817232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 22857088 - 22857191
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| ||||  ||| ||||| |||||||| ||||  ||||||||| |||  |  |||||||| |||| |||||||||| ||| |    
T  22857088 ttgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttcttttcaattgtactgttcaattaatattatatacactacttctaaaat 22857187  T
Q  226 atta 229  Q
    ||||    
T  22857188 atta 22857191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 47823603 - 47823504
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||| || |||||||| | |||  ||||||||||||||||||  |||| |||| ||  ||  ||||||||||||| |||||| || ||||||    
T  47823603 ttgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctttttaattgtattcttcaattaatactatatacactattttcaaatt 47823504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 23525441 - 23525387
Alignment:
Q  153 tttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||||||||||||| ||||  ||||||| ||||||||  ||||||||||||    
T  23525441 tttccaatgcaataataagtttttcttttcaactatacccttcaattaatactat 23525387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 27067634 - 27067703
Alignment:
Q  154 ttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    ||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||| | |||| |||| ||||    
T  27067634 ttccaatgcaataataactttttcttttcaattgtacccttcaattaatactacatacacaactttcaaa 27067703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 39356883 - 39356964
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||||||| || |||| ||||| ||| ||||||||||||||  |||  ||||||||| |||| |  ||||||||||||    
T  39356883 ttgttttaaaataaatgtcactttcagttttcaatgcaataataacattttcttttcaattgtacctttcaattaatactat 39356964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 45423618 - 45423719
Alignment:
Q  128 gttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattat 227  Q
    ||||||||||||  || ||||||| |||||||||||||||||| ||||  ||||||| ||| ||||| |||||||||||| ||||||||||||||| |||    
T  45423618 gttttaaaatgattgttattttcagtttccaatgcaataataactttttcttttcaaatattccctcgaattaatactatgcacactacttccaaagtat 45423717  T
Q  228 ta 229  Q
    ||    
T  45423718 ta 45423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 5717512 - 5717614
Alignment:
Q  127 tgttttaaaatgaacgtcattttcattttccaatgcaataat-aatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||||||||||| |||| ||||| |||||||||||||||| ||||||||||||| |||| || |||| |||||||||| ||||||||||||||||| |    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttcttttt-aattgta-cctccaattaatactctacacactacttccaaagt 5717609  T
Q  226 attac 230  Q
    |||||    
T  5717610 attac 5717614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 4658388 - 4658285
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| ||| |||||||||| ||||| |||||||||||||  ||||||||| ||||||  ||||||||||||| ||||||||| |||| |    
T  4658388 ttgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttcttttcaattgtacccttcaattaatactatatacactactttcaaagt 4658289  T
Q  226 atta 229  Q
    ||||    
T  4658288 atta 4658285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 43427442 - 43427339
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||| ||||||||||| |    
T  43427442 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttgcacgctacttccaaagt 43427343  T
Q  226 atta 229  Q
    ||||    
T  43427342 atta 43427339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 4051859 - 4051754
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttct-ttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||| ||||||||||||||||||||||| | ||||||||| |||| || ||||||||||||  ||||||||| ||||     
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttcttttcaattgtaccttccaattaatactatgtacactactttcaaag 4051760  T
Q  225 tattac 230  Q
    ||||||    
T  4051759 tattac 4051754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 12566135 - 12566038
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| |||||||| |||| ||||| ||||||||||||||||||||||| |||||||||| |||| |  |||||||| |||| ||||| ||||||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtaccattcaattaatattatatacactgcttccaaa 12566038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 18579165 - 18579262
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||  |||||  ||||||||||||| ||||||||||||||    
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgcacccttcaattaatactatatacactacttccaaa 18579262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 27964517 - 27964428
Alignment:
Q  134 aaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    ||||||| |||| ||| | |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||||||||||||||||||    
T  27964517 aaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatacacactacttccaaa 27964428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 35799201 - 35799304
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| ||||| || |||| ||||| |||||||||||||||||| |||| |||||||||| ||||||| |||||||| ||| |||||||||| |||| |    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttt-tttttcaattgtaccctccaattaatattatgcacactactttcaaagt 35799299  T
Q  226 attac 230  Q
    |||||    
T  35799300 attac 35799304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 7028967 - 7028864
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||||||||| |||||||||||||||| | ||||  ||||||| | ||||||  ||||||||||||| ||||||||| |||| |    
T  7028967 ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttcttttcaaatgtacccttcaattaatactatatacactactttcaaagt 7028868  T
Q  226 atta 229  Q
    ||||    
T  7028867 atta 7028864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 42004892 - 42004993
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaattat 227  Q
    |||||||||||| |||||||| | |||||||||||||||||||||||  ||||||||| ||||||  |||||||| |||   |||||||||||||| |||    
T  42004892 ttttaaaatgaatgtcatttttaatttccaatgcaataataattttttattttcaattgtacccttcaattaatattatgttacactacttccaaagtat 42004991  T
Q  228 ta 229  Q
    ||    
T  42004992 ta 42004993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 17695980 - 17695876
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||  |||| ||||| |||||||||  ||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| |    
T  17695980 ttgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 17695881  T
Q  226 attac 230  Q
    |||||    
T  17695880 attac 17695876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 36685895 - 36685803
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactactt 218  Q
    ||||||||||||||| || | ||||| |||| ||| ||||||||||||||  ||||||||| ||||||  ||||||||||||| |||||||||    
T  36685895 ttgttttaaaatgaatgttactttcaatttcaaatacaataataattttttcttttcaattgtacccttcaattaatactataaacactactt 36685803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 38926604 - 38926708
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||| || | |||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttctttttttcaattgtacccttcaattaatactatgttacactacttccaaag 38926703  T
Q  225 tatta 229  Q
    |||||    
T  38926704 tatta 38926708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 18719587 - 18719484
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||| ||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||  ||||||||||||| |||||| || |||| |    
T  18719587 ttgttttgaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactattttcaaagt 18719488  T
Q  226 atta 229  Q
    ||||    
T  18719487 atta 18719484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 28072565 - 28072672
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa---tttttctttttcaattataccctctaattaatactatacacactacttccaa 222  Q
    ||||||||||||||| |||| ||||| ||| |||| |||||||||   ||||| |||||||||  || |||| |||||||||| | ||||||||||||||    
T  28072565 ttgttttaaaatgaatgtcactttcagttttcaatacaataataactttttttttttttcaatcgtatcctccaattaatactcttcacactacttccaa 28072664  T
Q  223 attattac 230  Q
    | ||||||    
T  28072665 agtattac 28072672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 8540036 - 8540139
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    ||||||||||||||| | |||||||| |||||| ||||||||||| ||||||||||| |||| ||||||  |||||||| |||  |||||||||| |||     
T  8540036 ttgttttaaaatgaatgacattttcagtttccagtgcaataataactttttcttttt-aattgtacccttcaattaatattatttacactacttctaaaa 8540134  T
Q  225 tatta 229  Q
    |||||    
T  8540135 tatta 8540139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 12342091 - 12342195
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||  |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||   ||||||||||||||     
T  12342091 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 12342190  T
Q  225 tatta 229  Q
    |||||    
T  12342191 tatta 12342195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 22620489 - 22620385
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||  |||  ||||| |||||||||||||||||| ||||  ||||||||| ||||||| ||||||||||    |||||||||||||| |    
T  22620489 ttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactcaggacactacttccaaagt 22620390  T
Q  226 attac 230  Q
    |||||    
T  22620389 attac 22620385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 29396835 - 29396731
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    |||||| |||||||| |||| ||||  |||||||||||||||||| ||||  ||||||||||||||||  |||||||| |||   ||||||||||||||     
T  29396835 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattatacccttcaattaatattatgttacactacttccaaag 29396736  T
Q  225 tatta 229  Q
    |||||    
T  29396735 tatta 29396731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 30855105 - 30855200
Alignment:
Q  128 gttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaa 223  Q
    |||| |||||||| |||| | ||| |||||||||||||||||||||||| ||||||||| |||| | |||||||||||||   ||||||||||||||    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataatttttc-ttttcaattgtaccatttaattaatactatgttacactacttccaaa 30855200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 37038921 - 37038821
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||   |||||||||| ||||||||||||  |||||||| |||| ||||||||| |||| |    
T  37038921 ttgttttaaaatgaatgtcactttcagttttcaatgcaataac--tttttctttt-caattatacccttcaattaatattatatacactactttcaaagt 37038825  T
Q  226 atta 229  Q
    ||||    
T  37038824 atta 37038821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 45301763 - 45301855
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactactt 218  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| |||||   |||||||||| |  |||||||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccatcaattaatactgtgtacactactt 45301855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 7042341 - 7042239
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    |||||| |||||||| |||||||||| || ||||||||||||| | ||||||||||| |||  ||||||  ||||||||||||| ||||||||| ||||     
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctttttaaatg-tacccttcaattaatactatatacactactttcaaag 7042243  T
Q  225 tatt 228  Q
    ||||    
T  7042242 tatt 7042239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 9391706 - 9391616
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||||| |||||||||| |||  ||||||||||||||||||  ||||||||| |  ||| ||||||||| |||| ||||||||| ||||    
T  9391706 aaaatgaatgtcattttcagtttttaatgcaataataattttttcttttcaattgtgacctttaattaatattatatacactactttcaaa 9391616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 16463180 - 16463083
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattattac 230  Q
    ||||| || |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||  |||||||||  | ||||||||||||||| ||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaataccctgcacactacttccaaagtattac 16463083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 25383639 - 25383574
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattatacc 191  Q
    ||||||||||||||| || ||||||| |||||||||||||||||| ||||  ||||||||| ||||    
T  25383639 ttgttttaaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaattgtacc 25383574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 35046516 - 35046593
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    ||||||||| ||||| |||| ||||| |||||||||||||||||| ||||  |||| |||||||||||  ||||||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataacttttaatttttaattatacccttcaattaata 35046593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 36177974 - 36178051
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaata 203  Q
    |||||| |||||||| |||| ||||  |||||||||||||||||| |||| |||||||||| ||||||  ||||||||    
T  36177974 ttgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttttttttcaattgtacccttcaattaata 36178051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 45082046 - 45081957
Alignment:
Q  135 aatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaa 223  Q
    |||||| |||| ||||| |||||||||||||||||||||||  ||||||||| ||||||  |||||||| |||   ||||||||||||||    
T  45082046 aatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacactacttccaaa 45081957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 6220559 - 6220455
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||| ||| | |||||||||||||||||| ||||  ||||||| | |||| |  |||||||| |||   |||||||||||||||    
T  6220559 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaactgtacctttcaattaatattatgttacactacttccaaat 6220460  T
Q  225 tatta 229  Q
    |||||    
T  6220459 tatta 6220455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 34546486 - 34546410
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaat 202  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||||||||  |||| |||| ||||||  |||||||    
T  34546486 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttaaattgtacccttcaattaat 34546410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 27986034 - 27986140
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttcttttt--caattataccctctaattaatactatacacactacttccaaa 223  Q
    ||||||||||||||| |||| ||||| ||| |||| |||||| | ||||| |||||  ||||  || |||| |||||||||| | |||||||||||||||    
T  27986034 ttgttttaaaatgaatgtcactttcagttttcaatacaataaaactttttttttttttcaatcgtatcctccaattaatactcttcacactacttccaaa 27986133  T
Q  224 ttattac 230  Q
     ||||||    
T  27986134 gtattac 27986140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 16807672 - 16807594
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatac 204  Q
    |||||| ||||| || |||| ||| | |||||||||||||||||||||||  ||||||||| ||||||  |||||||||    
T  16807672 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatac 16807594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 16846953 - 16846875
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatac 204  Q
    |||||| ||||| || |||| ||| | |||||||||||||||||||||||  ||||||||| ||||||  |||||||||    
T  16846953 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatac 16846875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 441386 - 441305
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||  ||| |||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat 441305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 43481026 - 43480921
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcatt-ttccaatgca-ataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| |||||||  |||||||||| | || ||||||| ||||||| ||||  |||||||||||||| | ||||||||||| || |||| |||||||||    
T  43481026 ttgtttcaaaatgactgtcattttcagtgtttcaatgcatataataactttttcttttcaattataccttttaattaatactttatacacaacttccaaa 43480927  T
Q  224 ttatta 229  Q
     |||||    
T  43480926 gtatta 43480921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 777768 - 777812
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa 170  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||    
T  777768 ttgttttaaaatgaatgtcattttcaatttctaatgcaataataa 777812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 11132548 - 11132652
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttct-ttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    ||||||||| |||||  | ||||||| |||| ||| ||||||||| |||| | ||||||||| || ||| |||||||||||||| ||| ||||| ||||     
T  11132548 ttgttttaacatgaattttattttcagtttcaaattcaataataacttttttattttcaattgtatcctttaattaatactatatacattactttcaaaa 11132647  T
Q  225 tatta 229  Q
    |||||    
T  11132648 tatta 11132652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 29411694 - 29411797
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    ||||||||||||||| |||| ||| | ||| ||||||||||||||  |||||||||| |||| ||||||  |||||||| |||| ||| ||||| ||||     
T  29411694 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttcttttt-aattgtacccttcaattaatattatatacattactttcaaaa 29411792  T
Q  225 tatta 229  Q
    |||||    
T  29411793 tatta 29411797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 43971502 - 43971562
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaatt 186  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  |||||||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaatt 43971562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 4133022 - 4133089
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccct 193  Q
    |||||| |||||||| |||| ||||  |||||||||||||||||| ||||  ||||||||| ||||||    
T  4133022 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtaccct 4133089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 11188640 - 11188545
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatt 228  Q
    |||||||| |||| ||||| ||| |||||||| ||||| || | |||||||||| || | |  ||||||| ||||| |||||||||||||| ||||    
T  11188640 aaaatgaatgtcactttcagttttcaatgcaacaataacttatttttttcaattgtatcattcaattaatcctatatacactacttccaaagtatt 11188545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 4469499 - 4469581
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactata 208  Q
    |||||||||||||||  ||| ||||| ||| |||| ||||||||| ||||  ||||||||| ||||||  |||||||| ||||    
T  4469499 ttgttttaaaatgaatttcactttcagttttcaatacaataataactttttcttttcaattgtacccttaaattaatattata 4469581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 17703017 - 17703071
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttcttt 179  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||| |||||||||    
T  17703017 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttt 17703071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 3965 - 3861
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaatt 225  Q
    |||||| |||||||| |||| ||||| ||| |||||||||||||| ||||  ||||||||| ||||||| |||||||||| | ||||||||||||||| |    
T  3965 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 3866  T
Q  226 attac 230  Q
    |||||    
T  3865 attac 3861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 9796 - 9697
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaat 224  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||   |||||||||||||||    
T  9796 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaat 9697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 10110 - 10006
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttct-ttttcaattataccctctaattaatactatacacactacttccaaat 224  Q
    ||||||||||||||| |||| ||||| ||| |||| | |||||||||||| | ||||||||| ||||||  ||||| ||||||| ||| |||||| |||     
T  10110 ttgttttaaaatgaatgtcactttcaattttcaatactataataatttttttcttttcaattgtacccttcaattagtactatatacaatacttcaaaaa 10011  T
Q  225 tatta 229  Q
    |||||    
T  10010 tatta 10006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 723 - 623
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataa-tttttctttttcaattataccctctaattaatactatacacactacttccaaattat 227  Q
    |||||||||||| |||| || || |||||||||||||||||| ||||||||||| |||| ||||||  |||||||| |||| |||||||||||||| |||    
T  723 ttttaaaatgaatgtcacttacaatttccaatgcaataataactttttcttttt-aattgtacccttcaattaatattatatacactacttccaaagtat 625  T
Q  228 ta 229  Q
    ||    
T  624 ta 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 4141 - 4241
Alignment:
Q  129 ttttaaaatgaacgtcatttt-cattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattat 227  Q
    |||||||||||| |||||||| || ||| |||||||||||||||||||  ||||||||| ||||||  |||||||| |||| |||||||||| ||| |||    
T  4141 ttttaaaatgaatgtcatttttcaattttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatatacactacttctaaagtat 4240  T
Q  228 t 228  Q
    |    
T  4241 t 4241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 841 - 744
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaa 223  Q
    |||||| | |||||| |||| ||||| |||||| || |||||||||||||  ||||||||| |||||| ||||||||| |||| |||||| |||||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttcttttcaattgtaccctttaattaatattatatacactaattccaaa 744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 24895 - 24814
Alignment:
Q  126 ttgttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  24895 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat 24814  T

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Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 21233 - 21132
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat-acacactacttccaaattat 227  Q
    |||||||||||  |||| ||||| |||| ||||||||||||||||||  ||||||||| ||||||  ||||||||||||   ||||||||||||||| ||    
T  21233 ttttaaaatgactgtcactttcagtttcaaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaatgat 21134  T
Q  228 ta 229  Q
    ||    
T  21133 ta 21132  T

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Target: scaffold2107 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 665 - 589
Alignment:
Q  129 ttttaaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatact 205  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||||  ||| ||||| ||||||  ||||||||||    
T  665 ttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctttacaattgtacccttcaattaatact 589  T

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Target: scaffold0182 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 18402 - 18306
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||||||| |||||||||| |||||||||||||||||| ||||  ||||||||| ||||||  |||||| | |||| |||||| || |||| |||||    
T  18402 aaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaacattatatacactattttcaaagtatta 18306  T

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Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 3652 - 3578
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactat 207  Q
    |||||||| |||| ||||| |||||||| ||||||||| ||||  ||||||||| ||||||  ||||||||||||    
T  3652 aaaatgaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactat 3578  T

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Target: scaffold0300 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 4570 - 4666
Alignment:
Q  133 aaaatgaacgtcattttcattttccaatgcaataataatttttctttttcaattataccctctaattaatactatacacactacttccaaattatta 229  Q
    |||||||| |||| ||| | |||  ||||||||||||||||||  ||||||||| |||| |  ||| |||| |||| |||||||||||||| |||||    
T  4570 aaaatgaatgtcacttttaatttttaatgcaataataattttttcttttcaattgtacctttcaatcaatattatatacactacttccaaaatatta 4666  T

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