View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17273_low_13 (Length: 210)
Name: NF17273_low_13
Description: NF17273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17273_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 44473390 - 44473533
Alignment:
| Q |
1 |
ttccttttcatttctcannnnnnnnatttgagttaggttaatgtcgacacaagtttttccctcattattttaatgtatattggcaaaattgatcatacaa |
100 |
Q |
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| T |
44473390 |
ttccttttcatttctcattttttttatttgagttaggttaacgtcgactcaagtttttccctcattattttaatgtatattggcaaaattgatcatacaa |
44473489 |
T |
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| Q |
101 |
tcgagttggaattgagtgactttgtagagggaaagtcgtcatgg |
144 |
Q |
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||| |||||||||||||||||||||||| | ||||||||||||| |
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| T |
44473490 |
tcgtgttggaattgagtgactttgtagatgaaaagtcgtcatgg |
44473533 |
T |
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