View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17274_high_16 (Length: 254)
Name: NF17274_high_16
Description: NF17274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17274_high_16 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 36382534 - 36382294
Alignment:
| Q |
14 |
agaatatacagtcacatacctgcatacttataattccatattactgaagtctcgcgtagctcaaaattagaccgcggggttctttcagtaaaatactcaa |
113 |
Q |
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| T |
36382534 |
agaatatacagtcacatacctgcatacttataattccatattactgaagtctcgcgtagctcaaaattagaccgcggggttctttcagtaaaatactcaa |
36382435 |
T |
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| Q |
114 |
aaacatgctgaagtttcatagaaatatgaacagttcagacttgaaatccaagaagtttaatacgagaaacagttgtgttcatgtagccaaactaccttta |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36382434 |
aaacatgctgaagtttcatagaaatatgaacagttcagacttgaaatccaagaagtttaatacgagaaacagttgtgttcatgtagccaaactaccttta |
36382335 |
T |
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| Q |
214 |
cgctatcaacccaatccatgtttaaattttcaggcatggtt |
254 |
Q |
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| T |
36382334 |
cgctatcaacccaatccatgtttaaattttcaggcatggtt |
36382294 |
T |
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