View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17274_high_3 (Length: 525)

Name: NF17274_high_3
Description: NF17274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17274_high_3
NF17274_high_3
[»] chr1 (39 HSPs)
chr1 (11-505)||(6261605-6262099)
chr1 (93-283)||(6270699-6270889)
chr1 (446-507)||(6292513-6292574)
chr1 (450-506)||(23895353-23895409)
chr1 (451-507)||(35925715-35925771)
chr1 (454-508)||(7262506-7262560)
chr1 (471-509)||(23445379-23445417)
chr1 (451-505)||(35080060-35080114)
chr1 (446-504)||(37593676-37593734)
chr1 (446-500)||(40943223-40943277)
chr1 (450-507)||(31517729-31517786)
chr1 (451-499)||(35017601-35017649)
chr1 (451-507)||(37811877-37811933)
chr1 (452-507)||(4699604-4699659)
chr1 (450-500)||(4445732-4445782)
chr1 (450-507)||(24915039-24915097)
chr1 (453-506)||(6976952-6977004)
chr1 (462-506)||(3244935-3244979)
chr1 (451-507)||(15515566-15515622)
chr1 (446-506)||(17628619-17628679)
chr1 (464-508)||(47917274-47917318)
chr1 (450-505)||(4622117-4622172)
chr1 (463-506)||(15438000-15438043)
chr1 (451-506)||(26184773-26184828)
chr1 (451-506)||(43338141-43338196)
chr1 (446-500)||(1565531-1565585)
chr1 (468-506)||(3070080-3070118)
chr1 (462-508)||(3597269-3597315)
chr1 (465-507)||(4202140-4202182)
chr1 (446-500)||(10199404-10199458)
chr1 (450-507)||(15942736-15942794)
chr1 (450-504)||(46252674-46252728)
chr1 (450-507)||(51929527-51929585)
chr1 (446-499)||(11695881-11695934)
chr1 (451-507)||(601066-601121)
chr1 (446-506)||(4868420-4868480)
chr1 (450-502)||(5276317-5276369)
chr1 (451-507)||(7218063-7218119)
chr1 (451-499)||(30257708-30257756)
[»] chr5 (26 HSPs)
chr5 (446-506)||(41052888-41052948)
chr5 (450-507)||(37611204-37611261)
chr5 (450-507)||(37787934-37787991)
chr5 (446-500)||(12521548-12521602)
chr5 (446-504)||(37690628-37690686)
chr5 (450-507)||(17368700-17368757)
chr5 (450-499)||(33533536-33533585)
chr5 (453-506)||(36542272-36542325)
chr5 (453-498)||(36638774-36638819)
chr5 (451-504)||(37526191-37526244)
chr5 (451-507)||(4619732-4619788)
chr5 (462-506)||(32172689-32172733)
chr5 (457-508)||(40159848-40159900)
chr5 (451-506)||(10125708-10125763)
chr5 (464-507)||(37794687-37794730)
chr5 (465-507)||(15406001-15406043)
chr5 (446-500)||(16829379-16829433)
chr5 (454-500)||(17258879-17258925)
chr5 (451-508)||(6587095-6587152)
chr5 (456-505)||(12467163-12467212)
chr5 (462-507)||(36882103-36882148)
chr5 (450-506)||(7674672-7674728)
chr5 (451-507)||(14331392-14331448)
chr5 (458-506)||(25705649-25705697)
chr5 (450-506)||(28413274-28413330)
chr5 (454-506)||(31688067-31688119)
[»] chr2 (40 HSPs)
chr2 (450-506)||(34652026-34652082)
chr2 (451-505)||(1939323-1939377)
chr2 (453-508)||(5133799-5133854)
chr2 (450-507)||(14451039-14451096)
chr2 (462-506)||(1742022-1742066)
chr2 (454-506)||(43985237-43985289)
chr2 (451-507)||(44438828-44438884)
chr2 (450-509)||(29316762-29316821)
chr2 (453-507)||(1647263-1647317)
chr2 (454-507)||(9174843-9174897)
chr2 (453-507)||(10285887-10285941)
chr2 (451-505)||(16947051-16947105)
chr2 (451-505)||(17017716-17017770)
chr2 (450-499)||(16867763-16867812)
chr2 (450-507)||(26857099-26857156)
chr2 (446-507)||(28677648-28677709)
chr2 (451-500)||(38809351-38809400)
chr2 (462-499)||(43530108-43530145)
chr2 (450-502)||(1893275-1893327)
chr2 (450-506)||(41042012-41042068)
chr2 (475-506)||(4550796-4550827)
chr2 (465-508)||(13220472-13220515)
chr2 (457-500)||(29300676-29300719)
chr2 (453-508)||(43827941-43827996)
chr2 (452-506)||(9878672-9878726)
chr2 (456-506)||(41809235-41809285)
chr2 (450-507)||(43279517-43279575)
chr2 (453-507)||(43529847-43529901)
chr2 (445-505)||(26202047-26202108)
chr2 (462-507)||(28039321-28039366)
chr2 (446-503)||(33931563-33931620)
chr2 (466-507)||(33941949-33941990)
chr2 (454-506)||(2410036-2410087)
chr2 (454-506)||(8820282-8820334)
chr2 (446-506)||(10567077-10567137)
chr2 (454-506)||(32821837-32821889)
chr2 (450-502)||(36852496-36852548)
chr2 (451-507)||(41817193-41817249)
chr2 (451-507)||(43065439-43065495)
chr2 (450-502)||(43910993-43911045)
[»] chr3 (32 HSPs)
chr3 (451-506)||(3044249-3044304)
chr3 (454-508)||(52619031-52619085)
chr3 (451-502)||(25925767-25925818)
chr3 (462-507)||(38318996-38319041)
chr3 (445-502)||(44374639-44374696)
chr3 (451-507)||(21574515-21574571)
chr3 (463-507)||(29427634-29427678)
chr3 (450-506)||(37273158-37273214)
chr3 (453-507)||(2152167-2152221)
chr3 (465-507)||(5391918-5391960)
chr3 (452-506)||(20192596-20192650)
chr3 (456-506)||(42745068-42745118)
chr3 (465-507)||(53762383-53762425)
chr3 (454-499)||(1360523-1360568)
chr3 (453-506)||(31010429-31010482)
chr3 (450-507)||(50952357-50952414)
chr3 (465-505)||(13804816-13804856)
chr3 (462-506)||(49465926-49465970)
chr3 (456-506)||(29771868-29771918)
chr3 (464-506)||(50004690-50004732)
chr3 (454-507)||(36101596-36101649)
chr3 (454-507)||(36139906-36139959)
chr3 (466-507)||(39723229-39723270)
chr3 (453-506)||(43115083-43115136)
chr3 (454-499)||(45432936-45432981)
chr3 (450-507)||(47513677-47513734)
chr3 (465-506)||(48300472-48300513)
chr3 (453-506)||(52412894-52412947)
chr3 (453-505)||(10073207-10073259)
chr3 (450-498)||(20669196-20669244)
chr3 (462-506)||(36200132-36200176)
chr3 (450-499)||(52323891-52323942)
[»] chr6 (39 HSPs)
chr6 (452-506)||(9667975-9668029)
chr6 (450-507)||(20368169-20368226)
chr6 (450-506)||(2455834-2455890)
chr6 (450-506)||(4420667-4420723)
chr6 (451-506)||(7148691-7148746)
chr6 (451-500)||(8420193-8420242)
chr6 (454-507)||(34403883-34403936)
chr6 (462-506)||(27615263-27615307)
chr6 (463-506)||(27595557-27595600)
chr6 (463-506)||(27693429-27693472)
chr6 (465-507)||(1575934-1575976)
chr6 (465-507)||(31624129-31624171)
chr6 (450-511)||(3528827-3528888)
chr6 (465-502)||(17770448-17770485)
chr6 (450-507)||(34633112-34633169)
chr6 (446-506)||(2460141-2460201)
chr6 (454-502)||(6536975-6537023)
chr6 (446-506)||(7785734-7785794)
chr6 (454-502)||(25100071-25100119)
chr6 (468-507)||(769180-769219)
chr6 (464-507)||(4080954-4080997)
chr6 (453-500)||(6647414-6647461)
chr6 (451-506)||(8010382-8010437)
chr6 (361-396)||(17240693-17240728)
chr6 (464-507)||(22743519-22743562)
chr6 (464-506)||(30523697-30523739)
chr6 (466-507)||(696642-696683)
chr6 (454-507)||(725644-725697)
chr6 (473-506)||(740876-740909)
chr6 (453-506)||(2460933-2460986)
chr6 (465-506)||(4246449-4246490)
chr6 (454-507)||(7931715-7931768)
chr6 (450-507)||(8147055-8147111)
chr6 (462-507)||(30604932-30604977)
chr6 (464-508)||(283133-283177)
chr6 (450-494)||(17241254-17241298)
chr6 (453-497)||(29957921-29957965)
chr6 (451-507)||(32171372-32171428)
chr6 (451-503)||(33080571-33080623)
[»] chr4 (37 HSPs)
chr4 (453-507)||(6466035-6466089)
chr4 (451-504)||(6987733-6987786)
chr4 (462-507)||(1965977-1966022)
chr4 (450-507)||(2996597-2996654)
chr4 (451-507)||(20936218-20936274)
chr4 (453-503)||(11264328-11264378)
chr4 (445-507)||(39929757-39929819)
chr4 (462-499)||(17223033-17223070)
chr4 (450-503)||(18782759-18782812)
chr4 (451-500)||(19422423-19422472)
chr4 (462-507)||(22662236-22662281)
chr4 (450-503)||(28615547-28615600)
chr4 (465-509)||(488113-488157)
chr4 (464-508)||(19395059-19395103)
chr4 (446-506)||(27123342-27123402)
chr4 (454-506)||(29263398-29263450)
chr4 (451-507)||(29388809-29388865)
chr4 (450-502)||(42121512-42121563)
chr4 (457-508)||(30631987-30632038)
chr4 (467-506)||(41097246-41097285)
chr4 (453-507)||(1137739-1137793)
chr4 (452-506)||(2874614-2874668)
chr4 (453-507)||(53315353-53315407)
chr4 (465-507)||(56249563-56249605)
chr4 (450-507)||(1312865-1312922)
chr4 (462-507)||(22666715-22666760)
chr4 (453-506)||(27124134-27124187)
chr4 (451-508)||(27721742-27721799)
chr4 (453-506)||(28232572-28232625)
chr4 (467-500)||(35726747-35726780)
chr4 (447-500)||(41606207-41606260)
chr4 (462-507)||(43886120-43886165)
chr4 (454-506)||(20105421-20105472)
chr4 (461-505)||(20656072-20656116)
chr4 (465-504)||(24410936-24410976)
chr4 (456-508)||(37864340-37864392)
chr4 (462-506)||(50800020-50800064)
[»] chr8 (27 HSPs)
chr8 (456-507)||(926505-926556)
chr8 (465-507)||(43368689-43368731)
chr8 (450-507)||(7918435-7918492)
chr8 (450-503)||(21653105-21653158)
chr8 (454-506)||(31875585-31875637)
chr8 (463-506)||(29262864-29262907)
chr8 (451-508)||(11183570-11183627)
chr8 (451-500)||(20672775-20672824)
chr8 (452-500)||(7646232-7646280)
chr8 (462-506)||(9835890-9835934)
chr8 (452-500)||(12361218-12361266)
chr8 (451-507)||(42215295-42215351)
chr8 (466-509)||(2594984-2595027)
chr8 (464-507)||(3254263-3254306)
chr8 (451-506)||(11185246-11185301)
chr8 (453-504)||(27645931-27645982)
chr8 (465-507)||(779050-779092)
chr8 (450-508)||(8629129-8629187)
chr8 (446-500)||(11795112-11795166)
chr8 (453-507)||(41606892-41606946)
chr8 (456-506)||(43704366-43704416)
chr8 (446-507)||(10358598-10358659)
chr8 (450-507)||(30918137-30918193)
chr8 (462-507)||(38537627-38537672)
chr8 (450-507)||(43504775-43504832)
chr8 (451-499)||(5088877-5088925)
chr8 (462-506)||(37740417-37740460)
[»] chr7 (24 HSPs)
chr7 (458-502)||(45078310-45078354)
chr7 (465-507)||(15740400-15740442)
chr7 (445-507)||(25670575-25670637)
chr7 (448-506)||(36598346-36598404)
chr7 (451-508)||(425812-425869)
chr7 (466-507)||(11048067-11048108)
chr7 (453-506)||(12234879-12234932)
chr7 (450-499)||(39907992-39908041)
chr7 (450-502)||(529399-529451)
chr7 (451-507)||(22387885-22387941)
chr7 (451-491)||(28165116-28165156)
chr7 (462-506)||(39771797-39771841)
chr7 (451-506)||(9423584-9423639)
chr7 (460-507)||(20888383-20888430)
chr7 (463-506)||(29290370-29290413)
chr7 (455-506)||(39539771-39539822)
chr7 (452-506)||(48157110-48157164)
chr7 (453-506)||(3468641-3468694)
chr7 (475-508)||(11047916-11047949)
chr7 (466-507)||(43219633-43219674)
chr7 (446-507)||(46082056-46082117)
chr7 (450-506)||(7244704-7244760)
chr7 (467-507)||(19719047-19719087)
chr7 (454-506)||(27626113-27626165)
[»] scaffold0221 (1 HSPs)
scaffold0221 (458-500)||(2798-2840)
[»] scaffold0004 (1 HSPs)
scaffold0004 (464-500)||(98636-98672)


Alignment Details
Target: chr1 (Bit Score: 475; Significance: 0; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 11 - 505
Target Start/End: Original strand, 6261605 - 6262099
Alignment:
Q  11 gtgagatgaagattggcgtgggaggtggagggtgggtgcaggaagctgtgaggtcttgtatggaggaagatgagaattgggttgagggtaattatgggaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6261605 gtgagatgaagattggcgtgggaggtggagggtgggtgcaggaagctgtgaggtcttgtatggaggaagatgagaattgggttgagggtaattatgggaa 6261704  T
Q  111 tttgagtttgagtgttggtttggatttggggaagaagaaagttaaggagatggttatgggaagagaggatttatgggttgttggtattcatgggattggt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6261705 tttgagtttgagtgttggtttggatttggggaagaagaaagttaaggagatggttatgggaagagaggatttatgggttgttggtattcatgggattggt 6261804  T
Q  211 ggatctgggaaaacaactcttgttaaagagatttgtaaagatgaacaagtgagatgtaagtgatgatctattccacttcattaagaacttatttgaaatc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6261805 ggatctgggaaaacaactcttgttaaagagatttgtaaagatgaacaagtgagatgtaagtgatgatctattccacttcattaagaacttgtttgaaatc 6261904  T
Q  311 accgtgaatttgacataatcacgatgacactgattttgagtgacaccgtaattctgtcaaactcgccgtcaattcaaacatgcacaaactagctagacta 410  Q
    || |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6261905 actgtgattttgacataatcacgatgacactgattttgagtgacatcgtgattctgtcaaactcgccgtcaattcaaacatgcacaaactagctagacta 6262004  T
Q  411 gttatcacattagatgtaatagttagttacaataatattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6262005 gttatcacattagatgtaatagttagttacaataatattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 6262099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 6270699 - 6270889
Alignment:
Q  93 tgagggtaattatgggaatttgagtttgagtgttggtttggatttggggaagaagaaagttaaggagatggttatgggaagagaggatttatgggttgtt 192  Q
    |||||||| ||  |||||||||  ||||||| |||||||||| || |||||||| || |||| ||| |||||| | |||||  | ||||| ||  |||||    
T  6270699 tgagggtagtttggggaatttggatttgagttttggtttggagtttgggaagaataaggttatggaaatggttgttggaaggaaagatttttgtcttgtt 6270798  T
Q  193 ggtattcatgggattggtggatctgggaaaacaactcttgttaaagagatttgtaaagatgaacaagtgagatgtaagtgatgatctattc 283  Q
    || |||  |||||||||||||||||||||||| |||||||  | ||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  6270799 ggaatttctgggattggtggatctgggaaaactactcttgccagagagatttgtagagatgaacaagtgagaggtaagtgataatctattc 6270889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 507
Target Start/End: Original strand, 6292513 - 6292574
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||||||| || ||||||| |||||| ||||||||||||||||||||| ||||||    
T  6292513 tattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgtttt 6292574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 23895353 - 23895409
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||| ||||||    
T  23895353 ttggagagcttgtggaaataagttaaaaatagcttacgaacatgccataaattgttt 23895409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 35925715 - 35925771
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  35925715 tggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgtttt 35925771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 454 - 508
Target Start/End: Complemental strand, 7262560 - 7262506
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||| |||||||    
T  7262560 agagcttgtggaaataaggtgaaaacagcttatgaacatgtcaaaagctgttttt 7262506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 471 - 509
Target Start/End: Original strand, 23445379 - 23445417
Alignment:
Q  471 gttgaaaatagcttatgaacatgtcataagttgtttttg 509  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23445379 gttgaaaatagcttatgaacatgtcataagttgtttttg 23445417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 451 - 505
Target Start/End: Complemental strand, 35080114 - 35080060
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    |||||||||||| |||||||| | |||| ||||||||||||||||||||||||||    
T  35080114 tggagagcttgtcgaaataagctcaaaacagcttatgaacatgtcataagttgtt 35080060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 37593734 - 37593676
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgt 504  Q
    ||||||| ||||||| || ||||||| |||||| |||||||||||||||||||||||||    
T  37593734 tattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgt 37593676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 40943277 - 40943223
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||| |||||    
T  40943277 tattttggagagcttgtagaaataagttgaaaacagtttatgaacatgttataag 40943223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 31517786 - 31517729
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| || ||||||| |||||| |||||||||||||||||| |||||||||    
T  31517786 ttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgtttt 31517729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 499
Target Start/End: Original strand, 35017601 - 35017649
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  35017601 tggagagcttatggaaataagttgaaaataacttatggacatgtcataa 35017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 37811877 - 37811933
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||  ||||||||||||||||| || |||||||||||||||||| ||||||    
T  37811877 tggagagctaatggaaataagttgaaaacagtttatgaacatgtcataagctgtttt 37811933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 507
Target Start/End: Complemental strand, 4699659 - 4699604
Alignment:
Q  452 ggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||| | |||||||| | |||| ||||||||||||||||||||||||||||    
T  4699659 ggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgtttt 4699604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 500
Target Start/End: Original strand, 4445732 - 4445782
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| |||||    
T  4445732 ttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 4445782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 24915097 - 24915039
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatg-aacatgtcataagttgtttt 507  Q
    ||||||| |||||| |||||||||||||| |||||||| || |||||||||||||||||    
T  24915097 ttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttgtttt 24915039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 506
Target Start/End: Original strand, 6976952 - 6977004
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||| || |||||||||||| |||| |||||||||||||||||||||||||||    
T  6976952 gagagtttatggaaataagtt-aaaacagcttatgaacatgtcataagttgttt 6977004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 3244935 - 3244979
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||||||||||||||||||| |||||||||  |||||||    
T  3244935 tggaaataagttgaaaatagcttatggacatgtcattggttgttt 3244979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 15515566 - 15515622
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||| ||||| ||||||||| ||||||||||| |||  |||||||||||||||||||    
T  15515566 tggatagcttatggaaataaattgaaaatagcgtattgacatgtcataagttgtttt 15515622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 506
Target Start/End: Original strand, 17628619 - 17628679
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||  ||| |||||||| | |||||| |||||||| ||||||||||||||||||    
T  17628619 tattttggaggtcttttggaaatatgctgaaaacagcttatggacatgtcataagttgttt 17628679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 508
Target Start/End: Original strand, 47917274 - 47917318
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||    
T  47917274 gaaataagttgaaaacaacttatgaacatgtcataagtttttttt 47917318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 505
Target Start/End: Original strand, 4622117 - 4622172
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    |||||||||||||| ||||||| | |||| |||||||| |||||||||||| ||||    
T  4622117 ttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataagatgtt 4622172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 506
Target Start/End: Original strand, 15438000 - 15438043
Alignment:
Q  463 ggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||| ||||| || |||||||||||||||||||||||||    
T  15438000 ggaaataagctgaaagtaacttatgaacatgtcataagttgttt 15438043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 506
Target Start/End: Original strand, 26184773 - 26184828
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| |||||||||  |||||| |||||||| |||||||||||| |||||    
T  26184773 tggagagcttatggaaataatctgaaaacagcttatggacatgtcataagctgttt 26184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 506
Target Start/End: Original strand, 43338141 - 43338196
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| || ||||| | ||||||||| |||||||||||||||||| |||||    
T  43338141 tggagagcttatgaaaataggctgaaaatagattatgaacatgtcataagctgttt 43338196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 1565585 - 1565531
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    ||||||||||||||  || ||||||| |||||| |||||||| ||||||||||||    
T  1565585 tattttggagagctcatgaaaataagctgaaaacagcttatgcacatgtcataag 1565531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 506
Target Start/End: Complemental strand, 3070118 - 3070080
Alignment:
Q  468 taagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  3070118 taagctgaaaacagcttatgaacatgtcataagttgttt 3070080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 3597315 - 3597269
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||||||| |||||||||||||||  ||||||||||||| |||||    
T  3597315 tggaaataagctgaaaatagcttatggccatgtcataagttattttt 3597269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 507
Target Start/End: Complemental strand, 4202182 - 4202140
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||    
T  4202182 aaataagctgaaaatagcttatggacatgtcataagctgtttt 4202140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 10199458 - 10199404
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||||| |||||||| || ||||||| |||||| | |||||||||||||||||||    
T  10199458 tattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataag 10199404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 15942794 - 15942736
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaata-gcttatgaacatgtcataagttgtttt 507  Q
    ||||||| ||| | |||||||| |||||| | |||||||||||||||||||||||||||    
T  15942794 ttggagaacttattgaaataagctgaaaacatgcttatgaacatgtcataagttgtttt 15942736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 46252728 - 46252674
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgt 504  Q
    ||||||||||| || ||||||  |||||| | |||||||||||||||||||||||    
T  46252728 ttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagttgt 46252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 51929585 - 51929527
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaaca-tgtcataagttgtttt 507  Q
    ||||||| ||| ||||||||||||||||| |||||||||| | ||||||||| ||||||    
T  51929585 ttggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgtttt 51929527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 499
Target Start/End: Original strand, 11695881 - 11695934
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    |||| |||| ||||| || |||||||||||||| |||||||| |||||||||||    
T  11695881 tattctggaaagcttatgaaaataagttgaaaacagcttatggacatgtcataa 11695934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 601066 - 601121
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| || || ||||||| |||||||||||||  ||||||||||||||||||||    
T  601066 tggagagtttatgaaaataagctgaaaatagcttac-aacatgtcataagttgtttt 601121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 506
Target Start/End: Original strand, 4868420 - 4868480
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| | ||||| || |||||||||||||| | |||||  ||||||||||||||||||    
T  4868420 tattttgaaaagcttatgtaaataagttgaaaacaacttattgacatgtcataagttgttt 4868480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 502
Target Start/End: Original strand, 5276317 - 5276369
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    |||||||||||  | |||||| ||||||| | |||||||||||||||||||||    
T  5276317 ttggagagcttaagaaaataacttgaaaacaacttatgaacatgtcataagtt 5276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 7218119 - 7218063
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||| ||| || |||||||||||||| ||||| ||||| |||||||||| |||||    
T  7218119 tggagaacttatgaaaataagttgaaaacagcttgtgaacgtgtcataagtcgtttt 7218063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 499
Target Start/End: Original strand, 30257708 - 30257756
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    ||||| |||| | |||||||| |||||| ||||||||||||||||||||    
T  30257708 tggagggcttatagaaataagctgaaaacagcttatgaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 506
Target Start/End: Original strand, 41052888 - 41052948
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||||    
T  41052888 tattttggagagcttatggaaataagttaaaaatagtttatgaacatgtcataggttgttt 41052948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 37611261 - 37611204
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| |||||||||  |||||| ||||||||||||||||| ||||||||||    
T  37611261 ttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgtttt 37611204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 37787991 - 37787934
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| |||||||||  |||||| ||||||||||||||||| ||||||||||    
T  37787991 ttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgtttt 37787934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 500
Target Start/End: Original strand, 12521548 - 12521602
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    ||||||| ||||||| |||||||||| |||||| ||||||||||||| |||||||    
T  12521548 tattttgaagagcttatggaaataagctgaaaacagcttatgaacatatcataag 12521602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 37690686 - 37690628
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgt 504  Q
    |||| |||||||||| |||||||||| |||||| ||||||| ||||||||||| |||||    
T  37690686 tattatggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgt 37690628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 17368700 - 17368757
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| || |||||||||| ||||||  || ||||||||||||||||||||||||    
T  17368700 ttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgtttt 17368757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 499
Target Start/End: Complemental strand, 33533585 - 33533536
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    ||||||||||| ||||||||||||||||| | |||||||| |||||||||    
T  33533585 ttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 33533536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 506
Target Start/End: Complemental strand, 36542325 - 36542272
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||||||||||||| |||| ||||| || |||||||||||| |||||    
T  36542325 gagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgttt 36542272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 498
Target Start/End: Original strand, 36638774 - 36638819
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcata 498  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||    
T  36638774 gagagcttatggaaataagctgaaaaaagcttatgaacatgtcata 36638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 504
Target Start/End: Complemental strand, 37526244 - 37526191
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgt 504  Q
    |||||||||| |||||||||| |||||| ||||||| ||||||||||| |||||    
T  37526244 tggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgt 37526191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 4619732 - 4619788
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||| ||| |||||||||| |||||  |||||||||||||||||| |||||||||    
T  4619732 tggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgtttt 4619788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 32172689 - 32172733
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||    
T  32172689 tggaaataagctgaaaatggcttatggacatgtcataagttgttt 32172733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 508
Target Start/End: Original strand, 40159848 - 40159900
Alignment:
Q  457 gcttgtggaaataagttgaaaatagcttatg-aacatgtcataagttgttttt 508  Q
    ||||||| ||||||| | ||||||||||||| |||||||||||||||||||||    
T  40159848 gcttgtgaaaataagctaaaaatagcttatgaaacatgtcataagttgttttt 40159900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 506
Target Start/End: Complemental strand, 10125763 - 10125708
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| || ||||||| |||||| | ||||| |||||||||||||||||||    
T  10125763 tggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgttt 10125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 507
Target Start/End: Complemental strand, 37794730 - 37794687
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| | |||| ||||||||||||||||||||||||||||    
T  37794730 gaaataagctcaaaacagcttatgaacatgtcataagttgtttt 37794687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 507
Target Start/End: Complemental strand, 15406043 - 15406001
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||    
T  15406043 aaataaattgaaaacagcttatgaacatgtcataagctgtttt 15406001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 16829433 - 16829379
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    ||||||||||||||| |||||| ||||| |||  || ||||||||||||||||||    
T  16829433 tattttggagagcttatggaaagaagttcaaatcagtttatgaacatgtcataag 16829379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 500
Target Start/End: Complemental strand, 17258925 - 17258879
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    ||||||| || ||||||| |||||| |||||||||||||||||||||    
T  17258925 agagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 17258879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 508
Target Start/End: Complemental strand, 6587152 - 6587095
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||| |||||| ||||||| || ||| ||||||||||| ||||||||| |||||||    
T  6587152 tggagaacttgtgaaaataagctgtaaacagcttatgaacctgtcataagctgttttt 6587095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 505
Target Start/End: Original strand, 12467163 - 12467212
Alignment:
Q  456 agcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    ||||| || ||||||| |||||| ||||||| ||||||||||||||||||    
T  12467163 agcttatgaaaataagctgaaaacagcttataaacatgtcataagttgtt 12467212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 36882148 - 36882103
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| ||||||||| |||||||||||| ||| ||||||||    
T  36882148 tggaaataagatgaaaataggttatgaacatgttatatgttgtttt 36882103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 7674672 - 7674728
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||  ||||| ||||||| |||||| | ||||| |||||||||||||||||||    
T  7674672 ttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgttt 7674728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 14331392 - 14331448
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| || ||||||| |||||  |||||||| |||||||||||| ||||||    
T  14331392 tggagagcttatgaaaataagctgaaatcagcttatggacatgtcataagctgtttt 14331448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 506
Target Start/End: Complemental strand, 25705697 - 25705649
Alignment:
Q  458 cttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||| |||||||||||||| |||||||  |||||||| |||||||||    
T  25705697 cttgtgaaaataagttgaaaacagcttatagacatgtcacaagttgttt 25705649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 506
Target Start/End: Complemental strand, 28413330 - 28413274
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||| || |||||||||| |||||| |||||||||||||  |||||| |||||    
T  28413330 ttggagagtttatggaaataagctgaaaacagcttatgaacattccataagctgttt 28413274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 31688067 - 31688119
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| || ||||||||||||||||||||||  ||| |||||||| |||||    
T  31688067 agagcttatgaaaataagttgaaaatagcttatagacaagtcataagctgttt 31688119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 506
Target Start/End: Complemental strand, 34652082 - 34652026
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||    
T  34652082 ttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgttt 34652026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 451 - 505
Target Start/End: Complemental strand, 1939377 - 1939323
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  1939377 tggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 453 - 508
Target Start/End: Original strand, 5133799 - 5133854
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||    
T  5133799 gagagcttatggaaataagctgaaagtagcttatgaccatgtcataagttgttttt 5133854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 14451096 - 14451039
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||| |||||||||||||||| |||||| ||||||||  ||||||||||||||||||    
T  14451096 ttggatagcttgtggaaataagctgaaaacagcttatggtcatgtcataagttgtttt 14451039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 1742066 - 1742022
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    
T  1742066 tggaaataagttgaagatagcttatgcacatgtcataagttgttt 1742022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 43985237 - 43985289
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| |||||| |||||||||| |||||||| ||||||||||||||||||    
T  43985237 agagcttatggaaacaagttgaaaaaagcttatggacatgtcataagttgttt 43985289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 44438884 - 44438828
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||| |||||||||||||| |||||| || |||||||||||||||||| ||||||    
T  44438884 tggagatcttgtggaaataagctgaaaacaggttatgaacatgtcataagctgtttt 44438828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 29316821 - 29316762
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttttg 509  Q
    ||||||| ||| |||||||||| |||||| | ||||||||||||||||||| ||||||||    
T  29316821 ttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgtttttg 29316762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 507
Target Start/End: Original strand, 1647263 - 1647317
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| |||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  1647263 gagagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgtttt 1647317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 9174843 - 9174897
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaac-atgtcataagttgtttt 507  Q
    ||||||| || ||||||| |||||||||||||||||| |||||||||||||||||    
T  9174843 agagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgtttt 9174897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 507
Target Start/End: Original strand, 10285887 - 10285941
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||| ||| ||||||||||||||||| |||||||| |||||||||||||| ||||    
T  10285887 gagaacttatggaaataagttgaaaacagcttatggacatgtcataagttatttt 10285941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 505
Target Start/End: Original strand, 16947051 - 16947105
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    |||||||||  | |||||||||||||||||  |||||||||||||||||||||||    
T  16947051 tggagagctcatagaaataagttgaaaataatttatgaacatgtcataagttgtt 16947105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 505
Target Start/End: Original strand, 17017716 - 17017770
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    |||||||||  | |||||||||||||||||  |||||||||||||||||||||||    
T  17017716 tggagagctcatagaaataagttgaaaataatttatgaacatgtcataagttgtt 17017770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 499
Target Start/End: Original strand, 16867763 - 16867812
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    ||||||||||| ||||||||||||||||| | |||||||| |||||||||    
T  16867763 ttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 16867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 26857156 - 26857099
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| ||||||||||||| |||||||||  | ||||| ||||||||||||||||    
T  26857156 ttggagagtttgtggaaataagctgaaaatagactctgaacctgtcataagttgtttt 26857099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 507
Target Start/End: Complemental strand, 28677709 - 28677648
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||||||| ||||||||||  ||||| | |||||||| |||||||||| ||||||    
T  28677709 tattttggagagcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgtttt 28677648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 500
Target Start/End: Original strand, 38809351 - 38809400
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||||||||| ||||||||||||||||| || |||| |||||||||||||    
T  38809351 tggagagcttatggaaataagttgaaaacagattattaacatgtcataag 38809400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 499
Target Start/End: Complemental strand, 43530145 - 43530108
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  43530145 tggaaataagttgaaaatagcttgtgaacatgtcataa 43530108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 502
Target Start/End: Complemental strand, 1893327 - 1893275
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    ||||||| |||||| ||||||| |||||||| |||||| ||||||||||||||    
T  1893327 ttggagaacttgtgaaaataagctgaaaataacttatgtacatgtcataagtt 1893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 506
Target Start/End: Complemental strand, 41042068 - 41042012
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||| || ||||||||||||||||| |||| ||| |||||| |||||||||||    
T  41042068 ttggagagtttatggaaataagttgaaaacagctgatggacatgtaataagttgttt 41042012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 506
Target Start/End: Original strand, 4550796 - 4550827
Alignment:
Q  475 aaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||||||||||||||||||||||||    
T  4550796 aaaatagcttatgaacatgtcataagttgttt 4550827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 508
Target Start/End: Original strand, 13220472 - 13220515
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||    
T  13220472 aaataagtttaaaacagcttatgaacaagtcataagttgttttt 13220515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 500
Target Start/End: Original strand, 29300676 - 29300719
Alignment:
Q  457 gcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||    
T  29300676 gcttatggaaataagtagaaaatagctaatgaacatgtcataag 29300719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 508
Target Start/End: Complemental strand, 43827996 - 43827941
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||||||| |||||||||| |||  | ||||||||||||||||||| |||||||    
T  43827996 gagagcttgttgaaataagttaaaagcaacttatgaacatgtcataagctgttttt 43827941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 506
Target Start/End: Complemental strand, 9878726 - 9878672
Alignment:
Q  452 ggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||  ||||||||| ||||| | |||||| ||||||||||||||||||    
T  9878726 ggagagcttgaagaaataagtcgaaaacaacttatggacatgtcataagttgttt 9878672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 506
Target Start/End: Complemental strand, 41809285 - 41809235
Alignment:
Q  456 agcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||| |||||||||| | |||| | |||||||||||||||||||||||||    
T  41809285 agcttatggaaataagctaaaaacaacttatgaacatgtcataagttgttt 41809235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 43279575 - 43279517
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaaca-tgtcataagttgtttt 507  Q
    ||||||| |||||| |||||||||||||| |||||||||| | ||||||||| ||||||    
T  43279575 ttggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgtttt 43279517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 507
Target Start/End: Complemental strand, 43529901 - 43529847
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| || ||||||  ||||||||||||||||||||| |||||| ||||||    
T  43529901 gagagcttatgaaaataaactgaaaatagcttatgaacatggcataagctgtttt 43529847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 505
Target Start/End: Original strand, 26202047 - 26202108
Alignment:
Q  445 atattttggagagcttgtggaaataagttgaaaatagcttatgaaca-tgtcataagttgtt 505  Q
    |||| ||||||| ||| || |||||||||||||| |||||||||| | ||||||||||||||    
T  26202047 atatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgtt 26202108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 28039366 - 28039321
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| |||||| |||||||||||| ||||||| |||||||    
T  28039366 tggaaataagctgaaaacagcttatgaacaagtcataacttgtttt 28039321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 33931620 - 33931563
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttg 503  Q
    |||||||||||  | ||||||||||| |||||  | ||||||||||||||||||||||    
T  33931620 tattttggagaaatagtggaaataagctgaaataaacttatgaacatgtcataagttg 33931563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 507
Target Start/End: Original strand, 33941949 - 33941990
Alignment:
Q  466 aataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||||  ||||||||||| ||||||||||||||||    
T  33941949 aataagttgaaagcagcttatgaacttgtcataagttgtttt 33941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 506
Target Start/End: Complemental strand, 2410087 - 2410036
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| |||||||||| |||||||||| |||||||||| ||||||| ||||    
T  2410087 agagcttatggaaataagctgaaaatagc-tatgaacatgccataagtggttt 2410036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 506
Target Start/End: Complemental strand, 8820334 - 8820282
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||| ||| |||||    
T  8820334 agagcttatggaaataagctgaaaacagcttgtgaacatgtcagaagctgttt 8820282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 506
Target Start/End: Original strand, 10567077 - 10567137
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||| ||||||||||||| |||| || |||||| | ||||||| ||||||||||| |||||    
T  10567077 tattctggagagcttgtgaaaattagctgaaaacaacttatgatcatgtcataagctgttt 10567137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 32821837 - 32821889
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| | |||||||  |||||| |||||||| ||||||||||||||||||    
T  32821837 agagcttatagaaataaactgaaaacagcttatggacatgtcataagttgttt 32821889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 502
Target Start/End: Original strand, 36852496 - 36852548
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    ||||||||||| |||||||||  ||||||||| ||||  ||||||||||||||    
T  36852496 ttggagagcttatggaaataatctgaaaatagtttatagacatgtcataagtt 36852548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 41817193 - 41817249
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| |||||||||| |||||| |  |||| ||||||||||||| ||||||    
T  41817193 tggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgtttt 41817249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 43065495 - 43065439
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| | |||||||| |||||| |  ||||| |||||||||||||||||||    
T  43065495 tggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgtttt 43065439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 502
Target Start/End: Complemental strand, 43911045 - 43910993
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    ||||| ||||||||  |||||| |||||| | |||||||||||||||||||||    
T  43911045 ttggaaagcttgtgataataagctgaaaacaacttatgaacatgtcataagtt 43910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 8e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 451 - 506
Target Start/End: Complemental strand, 3044304 - 3044249
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| || |||||||||||||| |||||||||||||||||||||||||||    
T  3044304 tggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgttt 3044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 454 - 508
Target Start/End: Original strand, 52619031 - 52619085
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  52619031 agagcttgtgaaaataaggtgaaaatagcttatgaacatgtcataaattgttttt 52619085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 451 - 502
Target Start/End: Original strand, 25925767 - 25925818
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    |||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  25925767 tggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagtt 25925818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 38318996 - 38319041
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  38318996 tggaaataagctgaaaatagcttatgaacatgttataagttgtttt 38319041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 44374696 - 44374639
Alignment:
Q  445 atattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    |||| ||||||||||  |||||||||| ||||||||||||||| ||||||||||||||    
T  44374696 atatcttggagagctaatggaaataaggtgaaaatagcttatgtacatgtcataagtt 44374639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 21574515 - 21574571
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| |||||||||| | |||  ||||||||||||||||||||||||||||    
T  21574515 tggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgtttt 21574571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 507
Target Start/End: Complemental strand, 29427678 - 29427634
Alignment:
Q  463 ggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  29427678 ggaaataagttgaaaatagcttatgaacatgtcattaggtgtttt 29427634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 37273158 - 37273214
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| ||| ||||||||||||||||| | |||||| ||||||||||||||||||    
T  37273158 ttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgttt 37273214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 507
Target Start/End: Complemental strand, 2152221 - 2152167
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| | |||| |||||||||| |||||| |||||||||||||||||||||    
T  2152221 gagagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgtttt 2152167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 507
Target Start/End: Original strand, 5391918 - 5391960
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  5391918 aaataagttgaaaacagcttatgaacatgtcataagctgtttt 5391960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 506
Target Start/End: Complemental strand, 20192650 - 20192596
Alignment:
Q  452 ggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||| ||||||| ||||||||| |||||||| |||||||||||| |||||    
T  20192650 ggagagcttatggaaatgagttgaaaacagcttatggacatgtcataagctgttt 20192596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 506
Target Start/End: Original strand, 42745068 - 42745118
Alignment:
Q  456 agcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||| |||||||||| |||||| | |||||||||||||||||||||||||    
T  42745068 agcttatggaaataagatgaaaacaacttatgaacatgtcataagttgttt 42745118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 507
Target Start/End: Complemental strand, 53762425 - 53762383
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  53762425 aaataagttgaaaacagcttatgaacatgtcataagctgtttt 53762383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 499
Target Start/End: Complemental strand, 1360568 - 1360523
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||    
T  1360568 agagtttgtggaaataagctgaaaatagcttatggacatgtcataa 1360523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 506
Target Start/End: Original strand, 31010429 - 31010482
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||| ||||| |||| |||||| |||||||| ||||||||||||||||||    
T  31010429 gagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgttt 31010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 50952357 - 50952414
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| |||||||||| | |||| || |||||||||||||||||| ||||||    
T  50952357 ttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgtttt 50952414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 505
Target Start/End: Original strand, 13804816 - 13804856
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  13804816 aaataagttgaaaacagcttatggacatgtcataagttgtt 13804856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 49465970 - 49465926
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||    
T  49465970 tggaaataagttgaaaatagttcatggacatgtcataagttgttt 49465926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 506
Target Start/End: Original strand, 29771868 - 29771918
Alignment:
Q  456 agcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||| ||||||||||||||||| | |||||| ||||||| ||||||||||    
T  29771868 agcttatggaaataagttgaaaacaacttatggacatgtcctaagttgttt 29771918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 506
Target Start/End: Original strand, 50004690 - 50004732
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||| |||||| |||||| ||||||||||||||||||||    
T  50004690 gaaataagctgaaaacagcttaagaacatgtcataagttgttt 50004732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 36101596 - 36101649
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| || ||||||| |||||| ||||| ||||||||||||||| ||||||    
T  36101596 agagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgtttt 36101649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 36139906 - 36139959
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| || ||||||| |||||| ||||| ||||||||||||||| ||||||    
T  36139906 agagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgtttt 36139959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 507
Target Start/End: Complemental strand, 39723270 - 39723229
Alignment:
Q  466 aataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  39723270 aataagctgaaaacagcttatgaacatgtcataagctgtttt 39723229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 506
Target Start/End: Original strand, 43115083 - 43115136
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||| |||||||||| |||||| |  ||||| ||||||||||||||||||    
T  43115083 gagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgttt 43115136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 499
Target Start/End: Complemental strand, 45432981 - 45432936
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    ||||||| |||||||||| |||||| | ||||||||||||||||||    
T  45432981 agagcttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 47513677 - 47513734
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| || |||||| ||||||| | ||||||||| |||||||| |||||||    
T  47513677 ttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgtttt 47513734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 506
Target Start/End: Complemental strand, 48300513 - 48300472
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  48300513 aaataagttgaaaatagcttatacacatgtcataagctgttt 48300472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 506
Target Start/End: Complemental strand, 52412947 - 52412894
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||| | |||||||||| |||||| ||||||| ||||||||||| |||||||    
T  52412947 gagagcatatggaaataagctgaaaacagcttataaacatgtcataggttgttt 52412894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 505
Target Start/End: Complemental strand, 10073259 - 10073207
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    |||||||| | ||||||| || ||||||||||||  |||||||||||||||||    
T  10073259 gagagcttatagaaataacttaaaaatagcttatatacatgtcataagttgtt 10073207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 498
Target Start/End: Original strand, 20669196 - 20669244
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcata 498  Q
    ||||||||||| || |||||||  ||||| |||||||||||||||||||    
T  20669196 ttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 36200132 - 36200176
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| |||||| | |||||| ||||||||||||||||||    
T  36200132 tggaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 499
Target Start/End: Complemental strand, 52323942 - 52323891
Alignment:
Q  450 ttggagagctt--gtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    |||||||||||  |||||||||||||||||| |||||||| || ||||||||    
T  52323942 ttggagagcttatgtggaaataagttgaaaacagcttatggacgtgtcataa 52323891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 452 - 506
Target Start/End: Complemental strand, 9668029 - 9667975
Alignment:
Q  452 ggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||    
T  9668029 ggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgttt 9667975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 20368226 - 20368169
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| ||| || ||||||||||||| |||||||||||||||||||||||||||||    
T  20368226 ttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgtttt 20368169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 2455834 - 2455890
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||| |||||||||||||||||||| |||||  |||||||||||||||||    
T  2455834 ttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgttt 2455890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 4420667 - 4420723
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||||| ||||||    
T  4420667 ttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgttt 4420723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 451 - 506
Target Start/End: Original strand, 7148691 - 7148746
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||    
T  7148691 tggagagcttatgaaaataagttgaaaatagcttatggacaagtcataagttgttt 7148746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 451 - 500
Target Start/End: Complemental strand, 8420242 - 8420193
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  8420242 tggagagcttatggaaataagttgaaaatagcttgtggacatgtcataag 8420193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 34403883 - 34403936
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| |||||||||| |||||| | ||||||||||||||||||||||||||    
T  34403883 agagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgtttt 34403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 27615307 - 27615263
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| | |||||||||||||||||||||||||||||||||||    
T  27615307 tggaaattacttgaaaatagcttatgaacatgtcataagttgttt 27615263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 506
Target Start/End: Complemental strand, 27595600 - 27595557
Alignment:
Q  463 ggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  27595600 ggaaattacttgaaaatagcttatgaacatgtcataagttgttt 27595557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 506
Target Start/End: Complemental strand, 27693472 - 27693429
Alignment:
Q  463 ggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  27693472 ggaaattacttgaaaatagcttatgaacatgtcataagttgttt 27693429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 507
Target Start/End: Original strand, 1575934 - 1575976
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  1575934 aaataagttaaaaacagcttatgaacatgtcataagttgtttt 1575976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 507
Target Start/End: Original strand, 31624129 - 31624171
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  31624129 aaataagttgaaaacagcttatgaacatgtcataagctgtttt 31624171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 511
Target Start/End: Original strand, 3528827 - 3528888
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttttgat 511  Q
    ||||||||||| || ||||||| |||||| |  ||||| |||||||||||||||||||||||    
T  3528827 ttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagttgtttttgat 3528888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 502
Target Start/End: Complemental strand, 17770485 - 17770448
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17770485 aaataagttgaaaatagtttatgaacatgtcataagtt 17770448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 34633169 - 34633112
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| ||||||||||||| |||||||||  | ||||| ||||||||||||||||    
T  34633169 ttggagagtttgtggaaataagctgaaaatagactctgaacctgtcataagttgtttt 34633112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 506
Target Start/End: Complemental strand, 2460201 - 2460141
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||| |||||||||| ||||||||||||||||| | ||||   ||||||||||||||||||    
T  2460201 tattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgttt 2460141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 502
Target Start/End: Original strand, 6536975 - 6537023
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||||    
T  6536975 agagcttatggaaataagctgaaaacaacttatgaacatgtcataagtt 6537023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 506
Target Start/End: Complemental strand, 7785794 - 7785734
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||||||| |||||||||| |||||| | |||||  |||||||||||| |||||    
T  7785794 tattttggagagcttatggaaataagctgaaaacaacttatagacatgtcataagctgttt 7785734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 502
Target Start/End: Original strand, 25100071 - 25100119
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    ||||||| | |||||||||||||||||||  ||||||||||||||||||    
T  25100071 agagcttatagaaataagttgaaaatagcaaatgaacatgtcataagtt 25100119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 769180 - 769219
Alignment:
Q  468 taagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  769180 taagttgaaaacagcttatgaacatgtcataagatgtttt 769219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 507
Target Start/End: Original strand, 4080954 - 4080997
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||||||| | |||||||||||| |||||||||||||    
T  4080954 gaaataagttgaaaacaacttatgaacatggcataagttgtttt 4080997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 500
Target Start/End: Original strand, 6647414 - 6647461
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||||||| || |||||||||||||| | |||||||||||||||||||    
T  6647414 gagagcttatgaaaataagttgaaaacatcttatgaacatgtcataag 6647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 506
Target Start/End: Original strand, 8010382 - 8010437
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||| ||| | |||||||  ||||||||||||||||||||||||| ||||||||    
T  8010382 tggagaacttatagaaataaactgaaaatagcttatgaacatgtcatgagttgttt 8010437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 396
Target Start/End: Complemental strand, 17240728 - 17240693
Alignment:
Q  361 attctgtcaaactcgccgtcaattcaaacatgcaca 396  Q
    |||||||||||||| |||||||||||||||||||||    
T  17240728 attctgtcaaactcaccgtcaattcaaacatgcaca 17240693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 507
Target Start/End: Original strand, 22743519 - 22743562
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||    
T  22743519 gaaataagctgaaaacagcttatgaacatgtaataagttgtttt 22743562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 506
Target Start/End: Original strand, 30523697 - 30523739
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||    
T  30523697 gaaattagttgaaaacagcttatgaacatggcataagttgttt 30523739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 507
Target Start/End: Original strand, 696642 - 696683
Alignment:
Q  466 aataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  696642 aataagctgaaaacagcttatgaacatgtcataagctgtttt 696683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 507
Target Start/End: Complemental strand, 725697 - 725644
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| |||||||||| |||||||||  || | |||||||||||||||||||    
T  725697 agagcttatggaaataagctgaaaatagtctacggacatgtcataagttgtttt 725644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 506
Target Start/End: Complemental strand, 740909 - 740876
Alignment:
Q  473 tgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||| |||||||||||||||||||||||||    
T  740909 tgaaaataacttatgaacatgtcataagttgttt 740876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 506
Target Start/End: Complemental strand, 2460986 - 2460933
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||| ||||| |||||| |||||||||||||||  |||||| |||||||||||    
T  2460986 gagagtttgtgaaaataaattgaaaatagcttatagacatgtaataagttgttt 2460933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 506
Target Start/End: Original strand, 4246449 - 4246490
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||||||| |||||||| ||||||||| ||||||||    
T  4246449 aaataagttgaaaacagcttatggacatgtcatgagttgttt 4246490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 507
Target Start/End: Complemental strand, 7931768 - 7931715
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||  ||||||||| |||||| | |||| |||||||||||||||||||||    
T  7931768 agagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgtttt 7931715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 8147111 - 8147055
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| ||||  |||||||||||||||||||| | |||| ||||||||||||    
T  8147111 ttggagagcttatggag-taagttgaaaatagcttatgcatatgttataagttgtttt 8147055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 30604932 - 30604977
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||||||||| | ||||||||||| ||||| ||||||||    
T  30604932 tggaaataagttgaaaagaacttatgaacatttcataggttgtttt 30604977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 464 - 508
Target Start/End: Original strand, 283133 - 283177
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||||| ||||||||| ||||| |||||||||||| |||||||    
T  283133 gaaataagctgaaaatagtttatggacatgtcataagctgttttt 283177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 494
Target Start/End: Complemental strand, 17241298 - 17241254
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgt 494  Q
    |||||||| || ||||||||||||||||| | |||||||||||||    
T  17241298 ttggagagtttatggaaataagttgaaaacaacttatgaacatgt 17241254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 497
Target Start/End: Complemental strand, 29957965 - 29957921
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcat 497  Q
    |||||||| |||||||||| ||||||||| | |||||||||||||    
T  29957965 gagagcttatggaaataagctgaaaatagatcatgaacatgtcat 29957921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 32171428 - 32171372
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||| ||||| |||||||||| |||||||||||| || || ||||||||| ||||||    
T  32171428 tggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgtttt 32171372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 503
Target Start/End: Complemental strand, 33080623 - 33080571
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttg 503  Q
    |||||||||| | |||||||  |||||||| ||||| ||||||||||||||||    
T  33080623 tggagagcttatagaaataaactgaaaataacttataaacatgtcataagttg 33080571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 453 - 507
Target Start/End: Complemental strand, 6466089 - 6466035
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  6466089 gagagattatggaaataagttgaaaatagcttatgaacatctcataagttgtttt 6466035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 451 - 504
Target Start/End: Complemental strand, 6987786 - 6987733
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgt 504  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  6987786 tggagagcttatggaaataagttgaaaatagtttatggacatgtcataagttgt 6987733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 1965977 - 1966022
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||    
T  1965977 tggaaataagttaaaaacagcttatgaacatgtcataagttgtttt 1966022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 2996597 - 2996654
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||| | || |||||||||||||| |||||||| |||||||||||||||||||    
T  2996597 ttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgtttt 2996654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 20936274 - 20936218
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| || |||||||||| |||||| ||||||||||||| ||||||||||||||    
T  20936274 tggagagattatggaaataaggtgaaaacagcttatgaacatatcataagttgtttt 20936218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 503
Target Start/End: Original strand, 11264328 - 11264378
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttg 503  Q
    |||||||| ||||||||||||||||| || ||||| |||||||||||||||    
T  11264328 gagagcttatggaaataagttgaaaacagtttatggacatgtcataagttg 11264378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 507
Target Start/End: Complemental strand, 39929819 - 39929757
Alignment:
Q  445 atattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||| |||| ||||| | || ||||||||||||||||||||| ||||||||||| |||||||    
T  39929819 atattatggaaagcttattgatataagttgaaaatagcttatgcacatgtcataaattgtttt 39929757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 499
Target Start/End: Complemental strand, 17223070 - 17223033
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17223070 tggaaataagttgaaaacagcttatgaacatgtcataa 17223033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 503
Target Start/End: Complemental strand, 18782812 - 18782759
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttg 503  Q
    ||||||| |||||| ||||||||||||||||||| |  ||||||||||||||||    
T  18782812 ttggagaacttgtgaaaataagttgaaaatagctgaaaaacatgtcataagttg 18782759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 500
Target Start/End: Original strand, 19422423 - 19422472
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||||||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  19422423 tggagagcttatggaaataagttgaaaaaagcgtatgcacatgtcataag 19422472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 22662281 - 22662236
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||    
T  22662281 tggaaataagctgaaaatagcttatgaacatatcataagttttttt 22662236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 503
Target Start/End: Original strand, 28615547 - 28615600
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttg 503  Q
    ||||||||||| |||||||||| |||||||| || ||| |||||||||||||||    
T  28615547 ttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataagttg 28615600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 509
Target Start/End: Complemental strand, 488157 - 488113
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttttg 509  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||    
T  488157 aaataagatgaaaacagcttatgcacatgtcataagttgtttttg 488113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 19395103 - 19395059
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||    
T  19395103 gaaataagctgaaaatagcttataaacatgtcgtaagttgttttt 19395059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 506
Target Start/End: Complemental strand, 27123402 - 27123342
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||| |||||||||| ||||||||||||||||| | ||||   ||||||||||||||||||    
T  27123402 tattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgttt 27123342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 29263398 - 29263450
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||||||||||| |||||| | ||||||||||| ||||||| |||||    
T  29263398 agagcttgtggaaataagctgaaaacaacttatgaacatatcataagctgttt 29263450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 29388809 - 29388865
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||||||||||||||||  ||| || ||||||||||||| |||| ||||||    
T  29388809 tggagagcttgtggaaataagtttgaaacagattatgaacatgtcttaagctgtttt 29388865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 502
Target Start/End: Original strand, 42121512 - 42121563
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    ||||||| |||||||||||||| |||||  |||||||||||||||||||||||    
T  42121512 ttggagaacttgtggaaataagctgaaac-agcttatgaacatgtcataagtt 42121563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 508
Target Start/End: Original strand, 30631987 - 30632038
Alignment:
Q  457 gcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||| |||||||||| | |||| |||||||||||||| ||||||||||||||    
T  30631987 gcttttggaaataagcttaaaacagcttatgaacatgccataagttgttttt 30632038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 506
Target Start/End: Complemental strand, 41097285 - 41097246
Alignment:
Q  467 ataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  41097285 ataagttgaaaatagcttatggacatgtcattagttgttt 41097246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 507
Target Start/End: Original strand, 1137739 - 1137793
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| |||||||||  |||||| | ||||||||||||||||||| ||||||    
T  1137739 gagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgtttt 1137793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 506
Target Start/End: Complemental strand, 2874668 - 2874614
Alignment:
Q  452 ggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||| |||| ||||||||||  |||||||| ||||| ||||||||||||||||||    
T  2874668 ggagtgcttatggaaataagcggaaaatagattatggacatgtcataagttgttt 2874614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 507
Target Start/End: Original strand, 53315353 - 53315407
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| || ||||||||| ||||||||||||| |||||| ||| ||||||||    
T  53315353 gagagcttatgaaaataagttaaaaatagcttatggacatgtgatatgttgtttt 53315407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 507
Target Start/End: Original strand, 56249563 - 56249605
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||||||| |||||||||| |||||||||| ||||||    
T  56249563 aaataagttgaaaaaagcttatgaaaatgtcataagctgtttt 56249605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 1312865 - 1312922
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| || |||||||||| |||||| || ||||||| |||| ||||||||||||    
T  1312865 ttggagagtttatggaaataagctgaaaacagtttatgaatatgtaataagttgtttt 1312922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 22666760 - 22666715
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||  |||||||||||||||||||| ||||||||| ||||    
T  22666760 tggaaataaactgaaaatagcttatgaacatatcataagttttttt 22666715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 506
Target Start/End: Complemental strand, 27124187 - 27124134
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||| ||||| |||||| |||||||||||||||  |||||| |||||||||||    
T  27124187 gagagtttgtgaaaataaattgaaaatagcttatagacatgtaataagttgttt 27124134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 508
Target Start/End: Original strand, 27721742 - 27721799
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    ||||||||||| | ||||||| |||||| |||||||| | ||||||||||| ||||||    
T  27721742 tggagagcttgcgaaaataagctgaaaacagcttatggatatgtcataagtagttttt 27721799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 506
Target Start/End: Original strand, 28232572 - 28232625
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||||||||||| |||||| | ||||| || | ||||||||||||||    
T  28232572 gagagcttgtggaaataagatgaaaacaacttataaataagtcataagttgttt 28232625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 500
Target Start/End: Complemental strand, 35726780 - 35726747
Alignment:
Q  467 ataagttgaaaatagcttatgaacatgtcataag 500  Q
    ||||||||||||||||||||| ||||||||||||    
T  35726780 ataagttgaaaatagcttatggacatgtcataag 35726747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 500
Target Start/End: Original strand, 41606207 - 41606260
Alignment:
Q  447 attttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||||||||| ||| ||  |||||| ||||||||||||||| ||||||||||||    
T  41606207 attttggagatcttttgataataagctgaaaatagcttatgcacatgtcataag 41606260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 43886165 - 43886120
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| ||||||||||||||||| ||| |||||| ||||||    
T  43886165 tggaaataagctgaaaatagcttatgaaaatgccataagctgtttt 43886120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 506
Target Start/End: Complemental strand, 20105472 - 20105421
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| || ||||||| |||||| |||||||||| ||||||||||||||||    
T  20105472 agagcttatgtaaataagctgaaaa-agcttatgaatatgtcataagttgttt 20105421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 505
Target Start/End: Original strand, 20656072 - 20656116
Alignment:
Q  461 gtggaaataagttgaaaatagcttatgaacatgtcataagttgtt 505  Q
    |||||||||||||||| | | |||||| |||||||||||||||||    
T  20656072 gtggaaataagttgaagacaacttatggacatgtcataagttgtt 20656116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 504
Target Start/End: Original strand, 24410936 - 24410976
Alignment:
Q  465 aaataagttgaaaatagcttatgaac-atgtcataagttgt 504  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  24410936 aaataagttgaaaatagcttatgaacaatttcataagttgt 24410976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 508
Target Start/End: Complemental strand, 37864392 - 37864340
Alignment:
Q  456 agcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||||| ||||||| |||||| ||||||||||||| | ||||| |||||||    
T  37864392 agcttgtgaaaataaggtgaaaacagcttatgaacatttaataagctgttttt 37864340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 50800064 - 50800020
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||    
T  50800064 tggaaataagctgaaaacagcttatagacatgtcataagttgttt 50800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 507
Target Start/End: Original strand, 926505 - 926556
Alignment:
Q  456 agcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  926505 agcttgtggaaataagctgaaaacggcttatgaacatgtcataagttgtttt 926556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 465 - 507
Target Start/End: Complemental strand, 43368731 - 43368689
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  43368731 aaataagttgaaaatagctaatgaacatgtcataagttgtttt 43368689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 7918492 - 7918435
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| | ||||||||||| ||| |||||||||||||||| |||||||||||    
T  7918492 ttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgtttt 7918435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 503
Target Start/End: Original strand, 21653105 - 21653158
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttg 503  Q
    ||||||||||| || ||||||| |||||||||||||||||| ||||||||||||    
T  21653105 ttggagagcttatgaaaataagctgaaaatagcttatgaacgtgtcataagttg 21653158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 506
Target Start/End: Complemental strand, 31875637 - 31875585
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| || ||||||||||||||| ||||||| ||||||||||||||||||    
T  31875637 agagcttatgaaaataagttgaaaatggcttatggacatgtcataagttgttt 31875585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 506
Target Start/End: Complemental strand, 29262907 - 29262864
Alignment:
Q  463 ggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  29262907 ggaaattacttgaaaatagcttatgaacatgtcataagttgttt 29262864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 508
Target Start/End: Original strand, 11183570 - 11183627
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||||||||| |||||||||| |||||| |||||||  |||| |||||||||||||||    
T  11183570 tggagagcttatggaaataagctgaaaacagcttatagacatatcataagttgttttt 11183627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 500
Target Start/End: Original strand, 20672775 - 20672824
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||||||||| || ||||||| |||||| |||||||||||||||||||||    
T  20672775 tggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 500
Target Start/End: Original strand, 7646232 - 7646280
Alignment:
Q  452 ggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    ||||||||| |||||||||| ||||||||||| || |||||||||||||    
T  7646232 ggagagcttatggaaataagctgaaaatagctgatcaacatgtcataag 7646280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 9835934 - 9835890
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||    
T  9835934 tggaaataagatgaaaacagcttatgaacatgtcataagctgttt 9835890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 500
Target Start/End: Original strand, 12361218 - 12361266
Alignment:
Q  452 ggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    ||||||||  ||||||||||||||||| |||||||| ||||||||||||    
T  12361218 ggagagctaatggaaataagttgaaaacagcttatggacatgtcataag 12361266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 42215351 - 42215295
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| || ||||||| |||||| |||||||||||| |||||||| ||||||    
T  42215351 tggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataagctgtttt 42215295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 509
Target Start/End: Complemental strand, 2595027 - 2594984
Alignment:
Q  466 aataagttgaaaatagcttatgaacatgtcataagttgtttttg 509  Q
    |||||| |||||| | ||||||||||||||||||||||||||||    
T  2595027 aataagctgaaaacaacttatgaacatgtcataagttgtttttg 2594984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 507
Target Start/End: Original strand, 3254263 - 3254306
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| |||||| ||||||||||||||||||||| ||||||    
T  3254263 gaaataagctgaaaacagcttatgaacatgtcataagctgtttt 3254306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 506
Target Start/End: Original strand, 11185246 - 11185301
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||  ||||||||||||||||| | ||||||||||||| ||||| |||||    
T  11185246 tggagagctgatggaaataagttgaaaacaacttatgaacatgttataagatgttt 11185301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 504
Target Start/End: Original strand, 27645931 - 27645982
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgt 504  Q
    |||||||| | |||||||||||||||||||||||  | ||||||||||||||    
T  27645931 gagagcttatagaaataagttgaaaatagcttatagatatgtcataagttgt 27645982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 507
Target Start/End: Complemental strand, 779092 - 779050
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| |||||| | ||||||||||||||||||||||||||    
T  779092 aaataagatgaaaacaacttatgaacatgtcataagttgtttt 779050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 8629129 - 8629187
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    ||||||||||||| |||||||||| |||| | |||||||| || | |||||||||||||    
T  8629129 ttggagagcttgtagaaataagttaaaaacaacttatgaatattttataagttgttttt 8629187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 500
Target Start/End: Original strand, 11795112 - 11795166
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||| |||||||||| |||||||||| |||||| || ||||| ||||||||||||    
T  11795112 tattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 507
Target Start/End: Complemental strand, 41606946 - 41606892
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||| |||||||||| |||||| | ||| ||||||||||||||| ||||||    
T  41606946 gagagcttatggaaataagctgaaaacaacttttgaacatgtcataagctgtttt 41606892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 506
Target Start/End: Complemental strand, 43704416 - 43704366
Alignment:
Q  456 agcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||| |||||||||| | |||| || ||||||||||||||||||||||||    
T  43704416 agcttatggaaataagcttaaaacagtttatgaacatgtcataagttgttt 43704366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 507
Target Start/End: Original strand, 10358598 - 10358659
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| |||||| |||||| | |||||   ||||||||||||||||||||| ||||    
T  10358598 tattttggagaacttgtgaaaataaatcgaaaacgacttatgaacatgtcataagttatttt 10358659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 30918137 - 30918193
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||| |||||||||| |||||| | |||||||| |||||| ||||||||||    
T  30918137 ttggagagcttatggaaataagctgaaaacaacttatgaa-atgtcacaagttgtttt 30918193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 38537627 - 38537672
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||||  ||||||||||||||| |||||| |||||||||||    
T  38537627 tggaaataagccgaaaatagcttatgagcatgtcgtaagttgtttt 38537672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 43504775 - 43504832
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||| ||| |||||||||| |||||| ||||||| |||| ||| |||||||||||    
T  43504775 ttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgtttt 43504832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 499
Target Start/End: Original strand, 5088877 - 5088925
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    |||||||||| | ||||||||||||||| |||||||| |||||| ||||    
T  5088877 tggagagcttattgaaataagttgaaaacagcttatggacatgttataa 5088925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 37740460 - 37740417
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||    
T  37740460 tggaaataagctgaaaatag-ttatggacatgtcataagttgttt 37740417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 502
Target Start/End: Original strand, 45078310 - 45078354
Alignment:
Q  458 cttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||    
T  45078310 cttgtggaaataagttgaaaacagcttatggacatgtcataagtt 45078354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 507
Target Start/End: Complemental strand, 15740442 - 15740400
Alignment:
Q  465 aaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  15740442 aaataagttaaaaacagcttatgaacatgtcataagttgtttt 15740400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 507
Target Start/End: Complemental strand, 25670637 - 25670575
Alignment:
Q  445 atattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||| |||||||||||||| ||||||| |||||| |  |||| ||||||||||||||||||||    
T  25670637 atatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgtttt 25670575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 506
Target Start/End: Complemental strand, 36598404 - 36598346
Alignment:
Q  448 ttttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||| | | |||||||| |||||| ||||||||||||||||||||| |||||    
T  36598404 ttttggagagcgttttgaaataagctgaaaacagcttatgaacatgtcataagatgttt 36598346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 508
Target Start/End: Complemental strand, 425869 - 425812
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttttt 508  Q
    ||||||||  ||| ||||||| || ||||||||||||||||||||||||| |||||||    
T  425869 tggagagccagtgaaaataagctggaaatagcttatgaacatgtcataagctgttttt 425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 507
Target Start/End: Original strand, 11048067 - 11048108
Alignment:
Q  466 aataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  11048067 aataagctgaaaacagcttatgaacatgtcataagttgtttt 11048108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 506
Target Start/End: Complemental strand, 12234932 - 12234879
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||| |||||||||| |||||| |||||||  ||||||||||||||||||    
T  12234932 gagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgttt 12234879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 499
Target Start/End: Complemental strand, 39908041 - 39907992
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataa 499  Q
    |||||||||||||||||||||| |||||  |||||||| |||||||||||    
T  39908041 ttggagagcttgtggaaataagatgaaaccagcttatggacatgtcataa 39907992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 502
Target Start/End: Original strand, 529399 - 529451
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagtt 502  Q
    ||||||||||| || ||||| |||||||| ||||||||||| |||||||||||    
T  529399 ttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataagtt 529451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 22387941 - 22387885
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||| |||||||||||| |||| || |||| |||||| |||||||||||||    
T  22387941 tggagagcttatggaaataagttaaaaacagtttataaacatgccataagttgtttt 22387885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 491
Target Start/End: Original strand, 28165116 - 28165156
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaaca 491  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  28165116 tggagagcttatggaaataagttgaaaacagcttatgaaca 28165156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 39771797 - 39771841
Alignment:
Q  462 tggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||    
T  39771797 tggaaataagttgaaaacagcttatggacatatcataagttgttt 39771841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 506
Target Start/End: Complemental strand, 9423639 - 9423584
Alignment:
Q  451 tggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||||||||| | |||||||| |||||| | |||||||||||||||||| ||||||    
T  9423639 tggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataaattgttt 9423584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 507
Target Start/End: Complemental strand, 20888430 - 20888383
Alignment:
Q  460 tgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||||||||| |||||| | |||||||||||| |||||||||||||    
T  20888430 tgtggaaataagctgaaaacaacttatgaacatggcataagttgtttt 20888383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 506
Target Start/End: Original strand, 29290370 - 29290413
Alignment:
Q  463 ggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||    
T  29290370 ggaaatatgttgaaaacagcttatggacatgtcataagttgttt 29290413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 39539822 - 39539771
Alignment:
Q  455 gagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||  ||||||| |||||| |||||||| ||||||||||||||||||    
T  39539822 gagcttgtcaaaataagctgaaaacagcttatggacatgtcataagttgttt 39539771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 506
Target Start/End: Complemental strand, 48157164 - 48157110
Alignment:
Q  452 ggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||| ||| |||||||||| |||||| |||||||| ||||| ||||||||||||    
T  48157164 ggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgttt 48157110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 506
Target Start/End: Original strand, 3468641 - 3468694
Alignment:
Q  453 gagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    |||| ||||||||||||||||| ||| | |||||| ||||||||| ||||||||    
T  3468641 gagaacttgtggaaataagttggaaacaacttatggacatgtcattagttgttt 3468694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 508
Target Start/End: Original strand, 11047916 - 11047949
Alignment:
Q  475 aaaatagcttatgaacatgtcataagttgttttt 508  Q
    |||| |||||||||||||||||||||||||||||    
T  11047916 aaaacagcttatgaacatgtcataagttgttttt 11047949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 507
Target Start/End: Complemental strand, 43219674 - 43219633
Alignment:
Q  466 aataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  43219674 aataagctgaaaacagcttatgaacatgtcataagctgtttt 43219633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 507
Target Start/End: Original strand, 46082056 - 46082117
Alignment:
Q  446 tattttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    |||| |||||||||| || ||||||| |||||| | ||||||  ||||||||||||||||||    
T  46082056 tattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgtttt 46082117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 7244704 - 7244760
Alignment:
Q  450 ttggagagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||||||| || ||||||| |||||| | ||||||| |||||||||| ||||||    
T  7244704 ttggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgttt 7244760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 507
Target Start/End: Original strand, 19719047 - 19719087
Alignment:
Q  467 ataagttgaaaatagcttatgaacatgtcataagttgtttt 507  Q
    ||||| |||||| || |||||||||||||||||||||||||    
T  19719047 ataagctgaaaacagtttatgaacatgtcataagttgtttt 19719087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 506
Target Start/End: Complemental strand, 27626165 - 27626113
Alignment:
Q  454 agagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttt 506  Q
    ||||||| |||||||||||| |||| || ||||| |||||||||||| |||||    
T  27626165 agagcttatggaaataagtttaaaacagtttatggacatgtcataagctgttt 27626113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 500
Target Start/End: Original strand, 2798 - 2840
Alignment:
Q  458 cttgtggaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  2798 cttgtgaaaataagttgaaaatagcttgtgaacatgtcataag 2840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 500
Target Start/End: Complemental strand, 98672 - 98636
Alignment:
Q  464 gaaataagttgaaaatagcttatgaacatgtcataag 500  Q
    ||||||||||||||| |||||||||||||||||||||    
T  98672 gaaataagttgaaaacagcttatgaacatgtcataag 98636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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