View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17274_low_13 (Length: 320)
Name: NF17274_low_13
Description: NF17274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17274_low_13 |
 | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 7 - 304
Target Start/End: Complemental strand, 11769395 - 11769098
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | ||||||||||||||| ||||||||||| |||||||| |||||||| |||||| ||||||||||| |||||| |||||||||||||| ||| |
|
|
| T |
11769395 |
tcgaaggatatcaagattattgctatcccaagttcttgaagtgaccgattcaaggagagacctggttactctcataatatcaaaatcctcagacacgcaa |
11769296 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
11769295 |
gcccatgccttcaaatcaaaatattgttgaacttctttatcattgtagacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
11769196 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| |
|
|
| T |
11769195 |
caacacctatattattatggattgtgtctctctgtgatagcaacatgttcattattgtctctttgtcattcttcctacccactatgacagattcattt |
11769098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 304
Target Start/End: Complemental strand, 10127089 - 10126792
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | ||||||||||||||| ||||||||| | ||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
10127089 |
tcgaaggacatcaagattattgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaa |
10126990 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| ||||||||| |
|
|
| T |
10126989 |
acccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcccaaacctcccatgcccaaaattgcaa |
10126890 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||||||||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||| |
|
|
| T |
10126889 |
caacacctatattattatgggatgtgtctctctgagatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcattt |
10126792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 7 - 304
Target Start/End: Complemental strand, 10184403 - 10184106
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | ||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
10184403 |
tcgaaggacatcaagattattgctatcccaagttgtggaagtgacagattcaaggagagacttggttactctcataatatcaaaatcctcggacacacaa |
10184304 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| ||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
10184303 |
gcccacgccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
10184204 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||||||||| |||| || |||||||||| || || |||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||| |
|
|
| T |
10184203 |
caacacctatagcattatgggttgtgtctctctgtgacagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcattt |
10184106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 7 - 304
Target Start/End: Complemental strand, 10663687 - 10663390
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | |||||||| ||||| ||||||||| | ||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
10663687 |
tcgaaggacatcaagatctttgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaa |
10663588 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
10663587 |
acccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
10663488 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||||||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||| | || ||||| || |||| |||||||||| |
|
|
| T |
10663487 |
caacacctatattattatgggttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccatgagagattcattt |
10663390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 17 - 304
Target Start/End: Complemental strand, 10260849 - 10260562
Alignment:
| Q |
17 |
tcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgcct |
116 |
Q |
| |
|
|||||||||||| | |||||| ||||||||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||||||||| ||| |||| |
|
|
| T |
10260849 |
tcaagattattgatatcccaatttctagaagtgactgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacgcct |
10260750 |
T |
|
| Q |
117 |
tcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacacctat |
216 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
10260749 |
tcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10260650 |
T |
|
| Q |
217 |
attattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
|||||| | |||| ||||| || ||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||| |
|
|
| T |
10260649 |
attattgttggttgtttctctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcattt |
10260562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 16 - 300
Target Start/End: Complemental strand, 10580753 - 10580469
Alignment:
| Q |
16 |
atcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgcc |
115 |
Q |
| |
|
||||||||||||||| ||| ||||| | ||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||| ||| ||| |
|
|
| T |
10580753 |
atcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccacgcc |
10580654 |
T |
|
| Q |
116 |
ttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacaccta |
215 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
10580653 |
ttcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta |
10580554 |
T |
|
| Q |
216 |
tattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattc |
300 |
Q |
| |
|
|||||||| ||||||||| ||| || ||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||| |
|
|
| T |
10580553 |
tattattatggattgtgtttctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattc |
10580469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 7 - 304
Target Start/End: Complemental strand, 10032164 - 10031867
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | |||||||| ||||| ||| ||||| | ||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
10032164 |
tcgaaggacatcaagatctttgctatccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaa |
10032065 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
10032064 |
gcccaggccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
10031965 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||||||||||||||| || || |||||| || ||||||||||||||||||||||||||||||||||| || ||||| || |||| |||||||||| |
|
|
| T |
10031964 |
caacacctatattattatgggatgcgtctctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgagagattcattt |
10031867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 7 - 304
Target Start/End: Original strand, 10363706 - 10364003
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | ||||||||||||||| ||| ||||| | |||||| |||||||||| |||||||| ||||||||| |||||| ||||||||||| |||||| |
|
|
| T |
10363706 |
tcgaaggacatcaagattattgctttccgaagttatggaagtggcagattcaaggagagactttgttactctcataatatcaaaatcctcagagacacaa |
10363805 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
10363806 |
acccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaa |
10363905 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
|||||||||||||||| | |||| ||||| | || |||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||| |
|
|
| T |
10363906 |
caacacctatattattgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcattt |
10364003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 303
Target Start/End: Original strand, 10433961 - 10434248
Alignment:
| Q |
16 |
atcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgcc |
115 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||| || ||||| ||||||| ||||||||||| ||| ||| |
|
|
| T |
10433961 |
atcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaatcctgagacacacaagcccaggcc |
10434060 |
T |
|
| Q |
116 |
ttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacaccta |
215 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
10434061 |
ttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacaccta |
10434160 |
T |
|
| Q |
216 |
tattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcatt |
303 |
Q |
| |
|
| |||||| | |||||| ||| || ||||||||||||||||||||||||||||||||||| || || || || |||| ||||||||| |
|
|
| T |
10434161 |
tcttattatgagttgtgtttctctgtgatagcaacatgttcattattgtctctttgtcatccttccttccaaccatgaaagattcatt |
10434248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 18 - 304
Target Start/End: Complemental strand, 10195823 - 10195537
Alignment:
| Q |
18 |
caagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgcctt |
117 |
Q |
| |
|
|||||| |||||| ||| ||||| | ||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
10195823 |
caagatcattgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcctt |
10195724 |
T |
|
| Q |
118 |
caaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacacctata |
217 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
10195723 |
caaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctata |
10195624 |
T |
|
| Q |
218 |
ttattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||| | |||| ||||| | || |||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||| |
|
|
| T |
10195623 |
ttattgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttatcatcctttctacccaccatgacagattcattt |
10195537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 7 - 304
Target Start/End: Complemental strand, 9839022 - 9838725
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | ||||||||||||||| ||||| ||| | |||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
9839022 |
tcgaaggacatcaagattattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaa |
9838923 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| ||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
9838922 |
gcccacgccctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
9838823 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||||||||||| ||| || |||||||||| || ||||||||||||||||||||||||||||||||| | || ||||| || | ||||||||||||| |
|
|
| T |
9838822 |
caacacctatattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcattt |
9838725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 7 - 304
Target Start/End: Complemental strand, 9849900 - 9849603
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | ||||||||||||||| ||||| ||| | |||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
9849900 |
tcgaaggacatcaagattattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaa |
9849801 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| ||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
9849800 |
gcccacgccctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
9849701 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||||||||||| ||| || |||||||||| || ||||||||||||||||||||||||||||||||| | || ||||| || | ||||||||||||| |
|
|
| T |
9849700 |
caacacctatattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcattt |
9849603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 304
Target Start/End: Complemental strand, 10088940 - 10088654
Alignment:
| Q |
18 |
caagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgcctt |
117 |
Q |
| |
|
|||||| |||||| ||| ||||| | ||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
10088940 |
caagatcattgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcctt |
10088841 |
T |
|
| Q |
118 |
caaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacacctata |
217 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
10088840 |
caaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctata |
10088741 |
T |
|
| Q |
218 |
ttattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||| | |||| ||||| | || |||||||||||||||||||||||||| ||||| || ||||| || ||||||||||||||| |
|
|
| T |
10088740 |
ttattgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttatcatccttcctacccaccatgacagattcattt |
10088654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 7 - 304
Target Start/End: Original strand, 10375753 - 10376050
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | ||||||||||||||| ||||| ||||| |||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
10375753 |
tcgaaggacatcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaa |
10375852 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
10375853 |
gcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
10375952 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||||||||||||||| | ||||||| | | |||||||||||||||||||| || ||||| ||||| || ||||| || ||||||||||||||| |
|
|
| T |
10375953 |
caacacctatattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcattt |
10376050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 7 - 274
Target Start/End: Complemental strand, 10077430 - 10077163
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | |||||||| |||| | ||||||||||||||||||| |||||||| |||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
10077430 |
tcgaaggacatcaagatcattgttatcccaagttctagaagtgatcgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaa |
10077331 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| |||||||| |||||||||||| | | |||||| | |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
10077330 |
gcccatgcctgcaaatcaaaatggtatcgaactttataatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
10077231 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtca |
274 |
Q |
| |
|
|||||||||| |||||| || || | | | ||||||||||||||||||||||||||||||||| |
|
|
| T |
10077230 |
caacacctatcttattatgggttccgcccatccctgatagcaacatgttcattattgtctctttgtca |
10077163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 7 - 303
Target Start/End: Original strand, 11130934 - 11131230
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| || ||||||||||||||||| |||| || |||||||| ||||| |||||||| || |||||| |
|
|
| T |
11130934 |
tcgaagaaaatcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaa |
11131033 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| |||||| || | |||||| |||| |||||||| || |||||||||| ||| ||| |||||||| |||||||| | ||||||||| ||| ||||||||| |
|
|
| T |
11131034 |
gcccatgctttgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaa |
11131133 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcatt |
303 |
Q |
| |
|
||||||| ||||| ||| | | ||| || | ||||||||||||||| ||||||||||||||||||| |||||||| || |||| |||||||| |
|
|
| T |
11131134 |
caacaccgatattgttattgctagtgctgctctttgatagcaacatgttcgttattgtctctttgtcatcctttctaccaaccatgaatgattcatt |
11131230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 7 - 303
Target Start/End: Complemental strand, 8861447 - 8861151
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| ||| ||||||||||||||||| |||| || ||||| | | ||||| |||||||| || |||||| |
|
|
| T |
8861447 |
tcgaagaaaatcaagattattgttttcccaagctcttgaagtgacagattcaagaagagttttagttacagttgaaatatcaaaatcctctgatacacaa |
8861348 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| |||||| || | |||||| || | |||||||| || |||||||||||||||||| ||||| || ||||| || | ||||||||| ||| ||||||||| |
|
|
| T |
8861347 |
gcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaa |
8861248 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcatt |
303 |
Q |
| |
|
||||||| ||||| ||| | ||| || | ||||||||||||||||||| ||||||||| ||||| |||||||| || |||||||||||||| |
|
|
| T |
8861247 |
caacaccgatattgttattcctagtgctgctctctgatagcaacatgttcattactgtctctttatcatcatttctaccaaccatgacagattcatt |
8861151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 7 - 303
Target Start/End: Original strand, 11148762 - 11149058
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| || ||||||||||||||||| |||| || |||||||| ||||| |||||||| || |||||| |
|
|
| T |
11148762 |
tcgaagaaaatcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaa |
11148861 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| |||||| || | |||||| |||| |||||||| || |||||||||| ||| ||| |||||||| |||||||| | ||||||||| ||| ||||||||| |
|
|
| T |
11148862 |
gcccatgctttgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaa |
11148961 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcatt |
303 |
Q |
| |
|
||||||| ||||| ||| | | ||| || | ||||||||||||||| ||||| ||||||||||||| |||||||| || |||| |||||||| |
|
|
| T |
11148962 |
caacaccgatattgttattgctagtgctgctctttgatagcaacatgttcgttattatctctttgtcatcctttctaccaaccatgaatgattcatt |
11149058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 7 - 303
Target Start/End: Original strand, 11159925 - 11160221
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| ||| ||||||||||||||||| |||| || ||||| ||||| ||||||||||| |||||| |
|
|
| T |
11159925 |
tcgaagaaaatcaagattattggtttcccaagctcttgaagtgacagattcaagaagagttttagttacagataaaatatcaaaatcctcagatacacaa |
11160024 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| |||||| || ||||||||||| | |||||||| || || ||||||||||||||| ||||| || ||||| || | ||||||||| ||| ||||||||| |
|
|
| T |
11160025 |
gcccatgctttgaaatcaaaatgatcttgaactttttcattattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaa |
11160124 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcatt |
303 |
Q |
| |
|
|||| |||||||| ||| | ||| || | ||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||| |||| |
|
|
| T |
11160125 |
caacgcctatattgttattgccagtgctactctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagatgcatt |
11160221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 7 - 303
Target Start/End: Complemental strand, 10889467 - 10889171
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||| ||||||||| | ||||||| ||| ||||| ||||||||||| |||| || ||||| | ||||| ||||||||||| |||||| |
|
|
| T |
10889467 |
tcgaagaaaatctagattattgttttcccaagctcttgaagtcacagattcaagaagagttttagttacagttaaaatatcaaaatcctcagatacacaa |
10889368 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
| |||||| || | |||||| || | |||||||| || |||||||||||||||||| ||||| || ||||| || | ||||||||| ||| ||||||||| |
|
|
| T |
10889367 |
gcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaa |
10889268 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcatt |
303 |
Q |
| |
|
||||||| ||||| ||| | ||| || | ||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| |
|
|
| T |
10889267 |
caacaccgatattgttattcctagtgctgctctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagattcatt |
10889171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 10527455 - 10527282
Alignment:
| Q |
50 |
acagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgccttcaaatcaaaatgttgttgaacttctttatcat |
149 |
Q |
| |
|
|||||||||| |||||||||||||||||| || || ||||||||| || ||| || ||| ||||| | ||||||||| |||| ||| | || ||||| |
|
|
| T |
10527455 |
acagattcaatgagagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaaccttttcatcat |
10527356 |
T |
|
| Q |
150 |
tgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacacctatattatta |
223 |
Q |
| |
|
||||||||||||| |||||||| ||||| || | ||||||||| || | |||||||||||||||| ||||||| |
|
|
| T |
10527355 |
tgtaaacaagttgtgcaagggttgttttaccgacacctcccatacccaagattgcaacaacacctaaattatta |
10527282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 10500674 - 10500501
Alignment:
| Q |
50 |
acagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgccttcaaatcaaaatgttgttgaacttctttatcat |
149 |
Q |
| |
|
||||||||||| ||||| ||||||| |||| || || ||||||||| | |||||| |||||||||||| ||||||||||| || || || | || | |
|
|
| T |
10500674 |
acagattcaaggagagatttggttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaattttatcgtcgt |
10500575 |
T |
|
| Q |
150 |
tgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacacctatattatta |
223 |
Q |
| |
|
||||||||||||||||||| || ||||| || | |||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
10500574 |
tgtaaacaagttgagcaagtgttgttttaccgacgcctcccatacccaaaattgcaacaacacctaaattatta |
10500501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 13161141 - 13160935
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
||||||| |||||||||||||||| || | || ||| || |||||||||||| | | | || ||||||||| ||||| ||||||||| || |||||| |
|
|
| T |
13161141 |
tcgaagagaatcaagattattgctttcgccagctcttgaggtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
13161042 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||| |||| |||||| ||||| || ||||| || | ||| ||||| || ||||||||| |
|
|
| T |
13161041 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
13160942 |
T |
|
| Q |
207 |
caacacc |
213 |
Q |
| |
|
| ||||| |
|
|
| T |
13160941 |
ccacacc |
13160935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 13171192 - 13170986
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||||||||||||| | || | | ||| ||||||||||||||| | | | || ||||||||| ||||| ||||||||| || |||||| |
|
|
| T |
13171192 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
13171093 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||| |||| |||||| ||||| || ||||| || | ||| ||||| || ||||||||| |
|
|
| T |
13171092 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
13170993 |
T |
|
| Q |
207 |
caacacc |
213 |
Q |
| |
|
| ||||| |
|
|
| T |
13170992 |
ccacacc |
13170986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 13333065 - 13332859
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||||||||||||| | || | | ||| ||||||||||||||| | | | || ||||||||| ||||| ||||||||| || |||||| |
|
|
| T |
13333065 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
13332966 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||| |||| |||||| ||||| || ||||| || | ||| ||||| || ||||||||| |
|
|
| T |
13332965 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
13332866 |
T |
|
| Q |
207 |
caacacc |
213 |
Q |
| |
|
| ||||| |
|
|
| T |
13332865 |
ccacacc |
13332859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 223
Target Start/End: Original strand, 11781954 - 11782127
Alignment:
| Q |
50 |
acagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgccttcaaatcaaaatgttgttgaacttctttatcat |
149 |
Q |
| |
|
||||||||||| ||||||||||||| ||| || || ||||||||| || |||||| ||| | || |||||||||||||||| ||||| ||||| |
|
|
| T |
11781954 |
acagattcaaggagagacttggttattctaacaacatcgaaatcctccgatacacaaacccagactttgaaatcaaaatgttgttcaactttcacatcat |
11782053 |
T |
|
| Q |
150 |
tgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacacctatattatta |
223 |
Q |
| |
|
|||||||||| || |||||||| ||||| || | |||||||| || ||||||| |||||||||| ||||||| |
|
|
| T |
11782054 |
tgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccaaaattgcgacaacacctaaattatta |
11782127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 10517580 - 10517409
Alignment:
| Q |
52 |
agattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgccttcaaatcaaaatgttgttgaacttctttatcattg |
151 |
Q |
| |
|
||||||||| | |||||||||| |||| ||| || ||||||||||| |||||| ||| || || |||||||||||||||| ||||| | ||||||| |
|
|
| T |
10517580 |
agattcaaggatagacttggttgctctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattg |
10517481 |
T |
|
| Q |
152 |
taaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacacctatattatta |
223 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| || ||||||| ||||||||| ||||||| |
|
|
| T |
10517480 |
taaacaaactgtgcaagggtcgttttaccgacgcctcccatacccacaattgcagcaacacctaaattatta |
10517409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 177
Target Start/End: Complemental strand, 13289826 - 13289656
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
||||||| |||||||||||||||| || | | ||| ||||||||||||||| | | | || ||||||||| ||||| ||||||||| || |||||| |
|
|
| T |
13289826 |
tcgaagagaatcaagattattgctttcaccacctcttgaagtgacagattcatgaatggttttagttactctcaaaatatcgaaatcctccgatacacaa |
13289727 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttt |
177 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||| |||| |||||| ||||| || ||||| |
|
|
| T |
13289726 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggtttt |
13289656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 13344250 - 13344044
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||||||||||||| | || | | ||| ||||||||||||||| | | | || || |||||| ||||| ||||||||| || |||||| |
|
|
| T |
13344250 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagtgactctcagaatatcgaaatcctccgatacacaa |
13344151 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||| |||| |||||| ||||| || ||||| || | ||| ||||| || ||||||||| |
|
|
| T |
13344150 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
13344051 |
T |
|
| Q |
207 |
caacacc |
213 |
Q |
| |
|
| ||||| |
|
|
| T |
13344050 |
ccacacc |
13344044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 7 - 304
Target Start/End: Complemental strand, 26907058 - 26906761
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||| | ||||||||||||| | ||||||||||| |||||||| |||||||| ||||| |||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
26907058 |
tcgaaggacatcaagattattggtatcccaagttctggaagtgaccgattcaaggagagatttggttactctcataatatcaaaatcctcagacacacaa |
26906959 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
26906958 |
acccatgccttcaaatcaaaatgccgttgaacttctttatcattgtaaagaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
26906859 |
T |
|
| Q |
207 |
caacacctatattattacggattgtgtctctatgcgatagcaacatgttcattattgtctctttgtcatcttttctaccgactatgacagattcattt |
304 |
Q |
| |
|
||||||||||||||||| || |||||||||| | ||||||||||| ||||||||||||||||||||||| || ||||| || ||||||||||||||| |
|
|
| T |
26906858 |
caacacctatattattatgggttgtgtctctctctgatagcaacatattcattattgtctctttgtcatccttcctacccaccatgacagattcattt |
26906761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 135796 - 136002
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||||||||||||| | || | | ||| ||||||||||||||| | | | || ||||||||| ||||| ||||||||| || |||||| |
|
|
| T |
135796 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
135895 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||| |||| |||||| ||||| || ||||| || | ||| ||||| || ||||||||| |
|
|
| T |
135896 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
135995 |
T |
|
| Q |
207 |
caacacc |
213 |
Q |
| |
|
| ||||| |
|
|
| T |
135996 |
ccacacc |
136002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 145847 - 146053
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||||||||||||||||| | || | | ||| ||||||||||||||| | | | || ||||||||| ||||| ||||||||| || |||||| |
|
|
| T |
145847 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
145946 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||| |||| |||||| ||||| || ||||| || | ||| ||||| || ||||||||| |
|
|
| T |
145947 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
146046 |
T |
|
| Q |
207 |
caacacc |
213 |
Q |
| |
|
| ||||| |
|
|
| T |
146047 |
ccacacc |
146053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 11485135 - 11484962
Alignment:
| Q |
50 |
acagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgccttcaaatcaaaatgttgttgaacttctttatcat |
149 |
Q |
| |
|
||||||||||| || |||||||||| ||| | || ||||||||| || |||||| |||||| || | ||||||||| |||| ||||| || ||| | |
|
|
| T |
11485135 |
acagattcaaggagggacttggttatcctcacgacatcgaaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactttttcatcgt |
11485036 |
T |
|
| Q |
150 |
tgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacacctatattatta |
223 |
Q |
| |
|
||||||||||||| |||||||| ||||| || | |||||||| | |||||||||||||||||| ||||||| |
|
|
| T |
11485035 |
tgtaaacaagttgtgcaagggtcgttttaccgacgcctcccataaccaaaattgcaacaacacctaaattatta |
11484962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 44957664 - 44957833
Alignment:
| Q |
54 |
attcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgccttcaaatcaaaatgttgttgaacttctttatcattgta |
153 |
Q |
| |
|
||||||| |||||||| |||| ||| || |||||||||||| || ||||| ||||||| || | ||| |||||||||| ||||| | |||||||||| |
|
|
| T |
44957664 |
attcaagaagagactttgttattctaacaacattgaaatcctctgatacacatatccatgctttgagatcgaaatgttgttcaacttttatatcattgta |
44957763 |
T |
|
| Q |
154 |
aacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacacctatattatta |
223 |
Q |
| |
|
||||||||| || || || ||||| || | ||||||||| ||| | | ||||||||||||| ||||||| |
|
|
| T |
44957764 |
aacaagttgtgcgagagtcgttttaccgacacctcccatacctaaggtggcaacaacacctaaattatta |
44957833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 215
Target Start/End: Original strand, 17852895 - 17853060
Alignment:
| Q |
50 |
acagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaagtccatgccttcaaatcaaaatgttgttgaacttctttatcat |
149 |
Q |
| |
|
||||||||||| |||||||||||||||||| || || ||||| || || |||||| ||| || || | ||||||||| |||| ||| | || ||||| |
|
|
| T |
17852895 |
acagattcaaggagagacttggttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaaccttttcatcat |
17852994 |
T |
|
| Q |
150 |
tgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaacaccta |
215 |
Q |
| |
|
|||||||||| || |||||||| ||||| || | ||||||||| || | |||||||||||||||| |
|
|
| T |
17852995 |
tgtaaacaagctgtgcaagggtcgttttaccgacacctcccatccccaatattgcaacaacaccta |
17853060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 7128992 - 7129044
Alignment:
| Q |
116 |
ttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaag |
168 |
Q |
| |
|
||||| |||||||||||||| |||||||| |||||||| |||||||||||||| |
|
|
| T |
7128992 |
ttcaactcaaaatgttgttgcacttctttgtcattgtatacaagttgagcaag |
7129044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 7482138 - 7482094
Alignment:
| Q |
124 |
aaaatgttgttgaacttctttatcattgtaaacaagttgagcaag |
168 |
Q |
| |
|
|||||||||||| |||||||| |||||||| |||||||||||||| |
|
|
| T |
7482138 |
aaaatgttgttgcacttctttgtcattgtatacaagttgagcaag |
7482094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 29836804 - 29836588
Alignment:
| Q |
7 |
tcgaagaaaatcaagattattgctctcccaagttctagaagtgacagattcaagcagagacttggttactctcgtaatattgaaatcctcagacacacaa |
106 |
Q |
| |
|
|||||||| |||||| |||||| | | ||| ||| ||||||||| |||||| ||||| |||||||||||| |||| ||||| |||||||||||| |
|
|
| T |
29836804 |
tcgaagaagatcaaggttattggtattccattctcttgaagtgacaacttcaaggagagatttggttactctcaacatatcaaaatcttcagacacacaa |
29836705 |
T |
|
| Q |
107 |
gtccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaa |
206 |
Q |
| |
|
||| | | | ||||||||| | || |||||||| | ||||| | |||| |||| ||||| ||||| || |||||||||||||||| |||||| | |
|
|
| T |
29836704 |
acccagacttgtacatcaaaatgatttttaacttcttcctggttgtatataagtcgagcgagggtcgttttaccgatacctcccatgcctgtaattgcga |
29836605 |
T |
|
| Q |
207 |
caacacctatattatta |
223 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
29836604 |
ctacacctatattatta |
29836588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 31679755 - 31679845
Alignment:
| Q |
121 |
atcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctatacctcccatgcctgaaattgcaacaaca |
211 |
Q |
| |
|
||||||| ||| |||||| |||||||||||||||| ||||||||| |||| ||||| || | |||||||||||| |||||| ||||||| |
|
|
| T |
31679755 |
atcaaaacgttcttgaacatctttatcattgtaaagaagttgagctagggctgttttaccgacacctcccatgccgaaaattgaaacaaca |
31679845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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