View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17275_low_22 (Length: 373)

Name: NF17275_low_22
Description: NF17275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17275_low_22
NF17275_low_22
[»] chr3 (82 HSPs)
chr3 (1-373)||(28305999-28306367)
chr3 (133-217)||(1816552-1816636)
chr3 (108-199)||(24887318-24887409)
chr3 (114-185)||(31337450-31337521)
chr3 (107-162)||(49586988-49587043)
chr3 (109-183)||(10101527-10101601)
chr3 (109-183)||(10212452-10212526)
chr3 (108-186)||(36646430-36646508)
chr3 (108-186)||(38462225-38462303)
chr3 (108-186)||(40122801-40122878)
chr3 (108-217)||(27792816-27792925)
chr3 (121-199)||(33965524-33965604)
chr3 (108-187)||(24235730-24235809)
chr3 (109-183)||(10357378-10357452)
chr3 (108-186)||(22232770-22232848)
chr3 (108-166)||(38971203-38971261)
chr3 (108-186)||(42039103-42039180)
chr3 (108-158)||(44284134-44284184)
chr3 (114-217)||(20502085-20502190)
chr3 (108-165)||(51278226-51278283)
chr3 (108-168)||(5430970-5431030)
chr3 (114-186)||(33405215-33405287)
chr3 (135-186)||(23249529-23249580)
chr3 (135-186)||(41452494-41452545)
chr3 (112-183)||(42530182-42530253)
chr3 (108-162)||(1395615-1395669)
chr3 (144-186)||(16609950-16609992)
chr3 (289-359)||(21532720-21532790)
chr3 (144-186)||(22049261-22049303)
chr3 (145-195)||(22343589-22343639)
chr3 (289-359)||(35168665-35168735)
chr3 (110-184)||(43116478-43116552)
chr3 (140-186)||(43875624-43875670)
chr3 (108-186)||(52618947-52619025)
chr3 (133-186)||(2201097-2201150)
chr3 (133-186)||(19679376-19679429)
chr3 (108-161)||(20192679-20192732)
chr3 (112-224)||(237345-237457)
chr3 (122-178)||(13481253-13481309)
chr3 (109-161)||(15304420-15304472)
chr3 (111-187)||(36783381-36783457)
chr3 (142-198)||(39343018-39343074)
chr3 (108-184)||(42084301-42084377)
chr3 (110-178)||(43079688-43079756)
chr3 (109-183)||(10132769-10132844)
chr3 (108-187)||(19679505-19679584)
chr3 (108-186)||(21865522-21865598)
chr3 (135-182)||(31713959-31714006)
chr3 (119-186)||(43038756-43038821)
chr3 (137-180)||(51197790-51197833)
chr3 (108-162)||(905042-905096)
chr3 (108-162)||(8007767-8007821)
chr3 (108-182)||(12923377-12923451)
chr3 (133-199)||(23315595-23315661)
chr3 (108-162)||(41028923-41028977)
chr3 (149-187)||(41057023-41057061)
chr3 (108-162)||(42809245-42809299)
chr3 (108-158)||(44374720-44374770)
chr3 (109-211)||(47904086-47904188)
chr3 (133-186)||(21872319-21872372)
chr3 (133-186)||(22031165-22031218)
chr3 (108-165)||(26492899-26492955)
chr3 (135-176)||(28779327-28779368)
chr3 (109-186)||(30956674-30956751)
chr3 (109-186)||(30972486-30972563)
chr3 (108-177)||(31403302-31403371)
chr3 (126-179)||(35364254-35364307)
chr3 (121-186)||(37788817-37788882)
chr3 (108-185)||(48364928-48365005)
chr3 (149-186)||(52597673-52597710)
chr3 (119-164)||(53736183-53736228)
chr3 (133-182)||(54965475-54965524)
chr3 (134-186)||(1217848-1217900)
chr3 (133-217)||(14548738-14548822)
chr3 (134-186)||(21367637-21367689)
chr3 (109-184)||(29270245-29270321)
chr3 (108-160)||(31364845-31364897)
chr3 (144-188)||(33307498-33307542)
chr3 (127-179)||(35450553-35450605)
chr3 (108-180)||(44061077-44061149)
chr3 (110-154)||(47584420-47584464)
chr3 (108-184)||(48397590-48397666)
[»] chr2 (69 HSPs)
chr2 (108-186)||(17952749-17952827)
chr2 (114-186)||(37053544-37053616)
chr2 (133-186)||(5043608-5043661)
chr2 (122-186)||(14666506-14666570)
chr2 (108-199)||(28803541-28803632)
chr2 (108-186)||(10143116-10143194)
chr2 (124-186)||(11513858-11513920)
chr2 (119-207)||(3673762-3673850)
chr2 (108-216)||(10563576-10563684)
chr2 (108-216)||(15377709-15377817)
chr2 (108-226)||(656785-656903)
chr2 (108-162)||(33267588-33267642)
chr2 (133-183)||(33942119-33942169)
chr2 (108-186)||(34054949-34055027)
chr2 (140-182)||(37276722-37276764)
chr2 (108-181)||(29430700-29430772)
chr2 (107-175)||(35555073-35555139)
chr2 (110-186)||(5867239-5867315)
chr2 (119-199)||(42817411-42817491)
chr2 (135-186)||(1625871-1625922)
chr2 (119-186)||(6988070-6988137)
chr2 (111-174)||(31740019-31740082)
chr2 (114-165)||(33192143-33192194)
chr2 (108-182)||(35755554-35755628)
chr2 (108-178)||(5133716-5133786)
chr2 (112-186)||(18962086-18962160)
chr2 (108-186)||(28933768-28933846)
chr2 (108-186)||(29935947-29936025)
chr2 (108-158)||(32098384-32098434)
chr2 (133-186)||(36863673-36863726)
chr2 (123-184)||(40145421-40145482)
chr2 (113-178)||(10769690-10769757)
chr2 (110-162)||(14209223-14209275)
chr2 (116-211)||(15780031-15780124)
chr2 (119-223)||(25790081-25790185)
chr2 (119-183)||(33256695-33256759)
chr2 (108-160)||(40837502-40837554)
chr2 (108-178)||(14277949-14278020)
chr2 (135-186)||(18066099-18066150)
chr2 (110-188)||(33526013-33526094)
chr2 (108-187)||(44439407-44439486)
chr2 (133-186)||(7103530-7103584)
chr2 (108-158)||(29633016-29633066)
chr2 (110-224)||(30537537-30537651)
chr2 (133-179)||(33944574-33944620)
chr2 (124-186)||(37292395-37292457)
chr2 (133-195)||(43141840-43141902)
chr2 (136-186)||(43205281-43205331)
chr2 (112-185)||(43299451-43299525)
chr2 (109-186)||(1742080-1742157)
chr2 (121-162)||(3458614-3458655)
chr2 (108-181)||(10150699-10150772)
chr2 (109-178)||(11344340-11344409)
chr2 (125-186)||(17221588-17221649)
chr2 (149-186)||(29300630-29300667)
chr2 (109-186)||(37474701-37474778)
chr2 (125-186)||(37766759-37766820)
chr2 (151-216)||(43985021-43985086)
chr2 (107-223)||(4026760-4026876)
chr2 (108-186)||(5998754-5998828)
chr2 (133-225)||(9395099-9395191)
chr2 (111-179)||(9878737-9878805)
chr2 (135-227)||(13736300-13736392)
chr2 (108-144)||(13864594-13864630)
chr2 (108-176)||(25609740-25609808)
chr2 (133-181)||(35539692-35539740)
chr2 (151-227)||(39983329-39983405)
chr2 (108-148)||(40943853-40943893)
chr2 (151-183)||(42621618-42621650)
[»] chr5 (57 HSPs)
chr5 (112-210)||(4855646-4855744)
chr5 (133-186)||(41277398-41277451)
chr5 (112-224)||(14295454-14295566)
chr5 (108-183)||(39257438-39257512)
chr5 (121-184)||(39823171-39823234)
chr5 (108-184)||(12407711-12407787)
chr5 (264-359)||(32221009-32221104)
chr5 (108-183)||(37063125-37063200)
chr5 (114-176)||(28586824-28586886)
chr5 (133-182)||(9703292-9703341)
chr5 (110-184)||(14599353-14599429)
chr5 (133-198)||(36539715-36539780)
chr5 (133-181)||(32059642-32059690)
chr5 (108-171)||(35135725-35135788)
chr5 (120-186)||(12975303-12975369)
chr5 (108-186)||(16889679-16889757)
chr5 (108-186)||(18704084-18704161)
chr5 (108-186)||(26516344-26516422)
chr5 (115-209)||(36639473-36639567)
chr5 (122-199)||(15003549-15003626)
chr5 (135-199)||(18543231-18543296)
chr5 (133-186)||(27772686-27772739)
chr5 (119-224)||(37588370-37588475)
chr5 (134-183)||(41016149-41016198)
chr5 (120-176)||(2933709-2933765)
chr5 (109-216)||(3970698-3970806)
chr5 (108-224)||(9202758-9202874)
chr5 (119-162)||(29117002-29117045)
chr5 (109-184)||(31694463-31694538)
chr5 (108-199)||(38047890-38047981)
chr5 (123-178)||(39750102-39750157)
chr5 (138-185)||(40159793-40159840)
chr5 (119-217)||(40205091-40205187)
chr5 (133-171)||(583836-583874)
chr5 (105-186)||(2568598-2568680)
chr5 (108-158)||(7096203-7096253)
chr5 (135-217)||(8938617-8938699)
chr5 (136-186)||(8985633-8985683)
chr5 (133-183)||(10272482-10272532)
chr5 (134-224)||(17258893-17258983)
chr5 (108-182)||(19177423-19177497)
chr5 (108-186)||(32172597-32172675)
chr5 (121-186)||(9634729-9634794)
chr5 (114-182)||(10303751-10303817)
chr5 (137-186)||(19138767-19138816)
chr5 (108-161)||(20982208-20982261)
chr5 (133-186)||(34205208-34205261)
chr5 (109-186)||(35960359-35960435)
chr5 (119-224)||(37526209-37526314)
chr5 (122-162)||(985591-985631)
chr5 (121-161)||(6717071-6717111)
chr5 (134-186)||(14257435-14257487)
chr5 (108-186)||(26209461-26209538)
chr5 (107-158)||(38338267-38338316)
chr5 (108-176)||(38831514-38831582)
chr5 (134-182)||(41017697-41017745)
chr5 (134-186)||(41957499-41957551)
[»] chr7 (52 HSPs)
chr7 (108-185)||(5006558-5006635)
chr7 (108-199)||(28340431-28340522)
chr7 (108-184)||(9527140-9527216)
chr7 (121-208)||(17989049-17989136)
chr7 (112-186)||(30456498-30456572)
chr7 (108-185)||(1417208-1417285)
chr7 (108-165)||(45593788-45593845)
chr7 (108-180)||(46081977-46082050)
chr7 (108-180)||(49060484-49060556)
chr7 (108-187)||(3802186-3802265)
chr7 (108-186)||(27481342-27481420)
chr7 (108-186)||(27492739-27492817)
chr7 (110-199)||(22759132-22759221)
chr7 (108-217)||(27378845-27378953)
chr7 (133-186)||(31338477-31338530)
chr7 (108-165)||(35536051-35536108)
chr7 (101-186)||(44910541-44910626)
chr7 (133-186)||(47046156-47046209)
chr7 (119-186)||(9872826-9872894)
chr7 (108-164)||(39591537-39591593)
chr7 (108-186)||(5369739-5369815)
chr7 (133-199)||(29363487-29363553)
chr7 (108-162)||(33894567-33894620)
chr7 (149-227)||(40439039-40439117)
chr7 (289-359)||(43312351-43312421)
chr7 (108-178)||(45813236-45813306)
chr7 (108-181)||(30496648-30496721)
chr7 (108-165)||(31341138-31341195)
chr7 (121-186)||(45777219-45777284)
chr7 (119-187)||(992025-992093)
chr7 (108-216)||(3610758-3610866)
chr7 (110-162)||(23918903-23918955)
chr7 (122-186)||(44151528-44151592)
chr7 (111-158)||(3241388-3241435)
chr7 (110-184)||(7100668-7100743)
chr7 (119-186)||(11208404-11208471)
chr7 (107-186)||(27548206-27548285)
chr7 (113-224)||(40688996-40689107)
chr7 (135-186)||(44821930-44821981)
chr7 (110-185)||(47004033-47004108)
chr7 (108-178)||(5373169-5373239)
chr7 (108-158)||(7244646-7244696)
chr7 (108-210)||(7623082-7623184)
chr7 (108-182)||(24909613-24909682)
chr7 (108-158)||(28178913-28178963)
chr7 (108-162)||(39551620-39551674)
chr7 (157-211)||(46104590-46104644)
chr7 (133-186)||(12110329-12110382)
chr7 (133-186)||(24363649-24363702)
chr7 (109-162)||(43318600-43318653)
chr7 (119-224)||(48157130-48157235)
chr7 (134-186)||(18516297-18516349)
[»] chr1 (82 HSPs)
chr1 (119-199)||(27738215-27738295)
chr1 (108-224)||(37842365-37842481)
chr1 (108-209)||(5756711-5756812)
chr1 (108-209)||(6074418-6074519)
chr1 (121-185)||(28467356-28467420)
chr1 (119-186)||(25006082-25006149)
chr1 (108-186)||(7218122-7218200)
chr1 (134-216)||(25005815-25005897)
chr1 (108-186)||(43420202-43420280)
chr1 (109-158)||(26293182-26293231)
chr1 (108-185)||(49517014-49517091)
chr1 (108-200)||(17269194-17269286)
chr1 (107-186)||(45107566-45107647)
chr1 (111-186)||(15437910-15437985)
chr1 (108-186)||(17422986-17423065)
chr1 (133-224)||(30257652-30257743)
chr1 (114-181)||(37272639-37272706)
chr1 (119-173)||(15360849-15360903)
chr1 (108-162)||(35080142-35080196)
chr1 (137-186)||(8130409-8130458)
chr1 (133-186)||(10581125-10581178)
chr1 (121-182)||(30371105-30371166)
chr1 (109-182)||(33527199-33527272)
chr1 (108-177)||(36151562-36151631)
chr1 (108-181)||(40304107-40304180)
chr1 (133-186)||(45205037-45205090)
chr1 (108-184)||(1393069-1393145)
chr1 (108-224)||(4200173-4200289)
chr1 (123-186)||(4548679-4548743)
chr1 (133-209)||(5150906-5150982)
chr1 (133-181)||(46980182-46980230)
chr1 (119-186)||(4034063-4034130)
chr1 (108-199)||(6932996-6933087)
chr1 (108-211)||(48830099-48830202)
chr1 (133-211)||(5592708-5592786)
chr1 (108-198)||(7262554-7262644)
chr1 (144-186)||(12564922-12564964)
chr1 (119-217)||(25479536-25479634)
chr1 (111-181)||(30259540-30259610)
chr1 (108-162)||(45999360-45999414)
chr1 (108-180)||(5160353-5160422)
chr1 (110-179)||(29007771-29007840)
chr1 (108-173)||(40943445-40943510)
chr1 (108-160)||(23895280-23895332)
chr1 (119-165)||(781188-781235)
chr1 (119-186)||(9656605-9656672)
chr1 (122-209)||(18434503-18434590)
chr1 (134-217)||(27887135-27887218)
chr1 (114-217)||(39777613-39777716)
chr1 (119-162)||(44032071-44032114)
chr1 (133-195)||(44940312-44940372)
chr1 (108-186)||(4276684-4276762)
chr1 (121-195)||(4363671-4363745)
chr1 (108-154)||(6265038-6265084)
chr1 (111-169)||(15687138-15687196)
chr1 (171-217)||(23373329-23373375)
chr1 (107-161)||(24702204-24702257)
chr1 (108-222)||(34952159-34952273)
chr1 (108-217)||(38578471-38578581)
chr1 (108-186)||(42556679-42556757)
chr1 (133-211)||(44422668-44422746)
chr1 (108-158)||(50319236-50319286)
chr1 (141-186)||(4078197-4078242)
chr1 (112-157)||(17631178-17631223)
chr1 (133-162)||(28788610-28788639)
chr1 (110-163)||(30815706-30815759)
chr1 (133-186)||(47002922-47002975)
chr1 (111-195)||(3924571-3924655)
chr1 (133-161)||(4215341-4215369)
chr1 (133-161)||(5941520-5941548)
chr1 (108-224)||(6292437-6292553)
chr1 (121-181)||(7273992-7274052)
chr1 (109-186)||(14630014-14630093)
chr1 (110-158)||(14737781-14737829)
chr1 (130-170)||(15064899-15064939)
chr1 (114-162)||(26630413-26630461)
chr1 (112-224)||(31517750-31517862)
chr1 (119-155)||(33975545-33975581)
chr1 (109-177)||(34380390-34380458)
chr1 (108-160)||(38867907-38867959)
chr1 (114-158)||(42351982-42352026)
chr1 (108-180)||(49557085-49557157)
[»] chr8 (66 HSPs)
chr8 (108-186)||(29973025-29973103)
chr8 (110-186)||(6864507-6864586)
chr8 (108-186)||(7514522-7514600)
chr8 (109-162)||(2698738-2698791)
chr8 (109-186)||(13561360-13561437)
chr8 (135-227)||(26284802-26284894)
chr8 (108-183)||(42597345-42597420)
chr8 (108-186)||(11795036-11795114)
chr8 (109-211)||(33209243-33209345)
chr8 (108-186)||(35869781-35869859)
chr8 (133-186)||(9836902-9836955)
chr8 (113-186)||(27728069-27728142)
chr8 (121-186)||(30013175-30013240)
chr8 (133-186)||(34770861-34770914)
chr8 (111-224)||(39866744-39866860)
chr8 (119-186)||(30600397-30600464)
chr8 (108-186)||(1470904-1470982)
chr8 (134-180)||(9572839-9572885)
chr8 (112-178)||(11056723-11056789)
chr8 (108-186)||(28769387-28769465)
chr8 (137-186)||(1561247-1561296)
chr8 (108-197)||(12361136-12361225)
chr8 (108-225)||(16210895-16211012)
chr8 (121-210)||(34551077-34551166)
chr8 (133-222)||(39551221-39551310)
chr8 (134-186)||(9834837-9834889)
chr8 (135-187)||(11784696-11784748)
chr8 (108-224)||(31862437-31862553)
chr8 (133-217)||(33912102-33912186)
chr8 (133-217)||(41336662-41336746)
chr8 (143-186)||(2091740-2091783)
chr8 (109-199)||(6509338-6509426)
chr8 (119-186)||(8799360-8799427)
chr8 (108-211)||(10075574-10075677)
chr8 (119-186)||(10437840-10437906)
chr8 (108-199)||(13652159-13652250)
chr8 (108-199)||(13710802-13710893)
chr8 (119-178)||(29699209-29699268)
chr8 (108-199)||(31915304-31915395)
chr8 (108-186)||(35298525-35298604)
chr8 (139-182)||(43704430-43704473)
chr8 (108-186)||(4558742-4558820)
chr8 (108-186)||(7918821-7918899)
chr8 (108-186)||(31884538-31884616)
chr8 (108-186)||(34080314-34080392)
chr8 (108-154)||(35534941-35534987)
chr8 (142-184)||(45314324-45314366)
chr8 (108-184)||(1664327-1664401)
chr8 (108-165)||(2699250-2699307)
chr8 (133-182)||(5071019-5071068)
chr8 (110-227)||(11183491-11183608)
chr8 (124-165)||(11764065-11764106)
chr8 (108-161)||(26215440-26215493)
chr8 (109-182)||(30040598-30040670)
chr8 (133-182)||(34213581-34213630)
chr8 (133-182)||(38260501-38260550)
chr8 (109-154)||(40728498-40728543)
chr8 (109-184)||(926432-926508)
chr8 (108-180)||(3537085-3537157)
chr8 (141-185)||(7645955-7645999)
chr8 (134-186)||(8062494-8062546)
chr8 (121-165)||(8066910-8066954)
chr8 (145-217)||(11813122-11813194)
chr8 (108-216)||(12224917-12225025)
chr8 (138-186)||(29342259-29342307)
chr8 (110-186)||(39561589-39561665)
[»] chr4 (76 HSPs)
chr4 (119-185)||(30207620-30207685)
chr4 (109-205)||(7368084-7368181)
chr4 (108-224)||(11802479-11802594)
chr4 (110-217)||(17884014-17884121)
chr4 (146-216)||(36722687-36722757)
chr4 (108-186)||(49219083-49219161)
chr4 (121-186)||(10192241-10192306)
chr4 (109-162)||(21952906-21952959)
chr4 (121-185)||(49085946-49086010)
chr4 (121-185)||(55870390-55870454)
chr4 (108-186)||(2980514-2980597)
chr4 (110-221)||(10206181-10206292)
chr4 (114-181)||(24929443-24929510)
chr4 (133-224)||(35290197-35290288)
chr4 (108-186)||(3175895-3175973)
chr4 (108-162)||(22684588-22684642)
chr4 (108-186)||(24443982-24444060)
chr4 (108-186)||(46415840-46415918)
chr4 (108-186)||(54325085-54325163)
chr4 (133-186)||(2996542-2996595)
chr4 (114-187)||(4071832-4071905)
chr4 (108-181)||(19691351-19691424)
chr4 (108-181)||(19701936-19702009)
chr4 (133-222)||(21157737-21157826)
chr4 (108-209)||(23819034-23819134)
chr4 (110-199)||(52735068-52735157)
chr4 (108-224)||(6364093-6364209)
chr4 (133-181)||(22471300-22471348)
chr4 (109-177)||(42321936-42322004)
chr4 (119-183)||(53626731-53626795)
chr4 (135-186)||(927447-927498)
chr4 (133-184)||(8151789-8151840)
chr4 (109-184)||(24160545-24160620)
chr4 (100-183)||(36460522-36460605)
chr4 (110-181)||(50745946-50746017)
chr4 (139-185)||(11698934-11698980)
chr4 (109-199)||(18630625-18630715)
chr4 (108-182)||(29373939-29374013)
chr4 (289-359)||(34744909-34744979)
chr4 (108-186)||(35958599-35958677)
chr4 (119-161)||(36734848-36734890)
chr4 (108-186)||(44319894-44319971)
chr4 (133-186)||(437480-437533)
chr4 (133-182)||(927261-927310)
chr4 (108-217)||(5219517-5219626)
chr4 (109-162)||(21952520-21952573)
chr4 (133-185)||(13949893-13949945)
chr4 (109-224)||(24370963-24371079)
chr4 (133-185)||(46796987-46797039)
chr4 (108-158)||(4191683-4191734)
chr4 (134-185)||(10812478-10812529)
chr4 (123-182)||(18628595-18628654)
chr4 (143-186)||(42866047-42866090)
chr4 (124-171)||(46013363-46013410)
chr4 (110-199)||(46019664-46019750)
chr4 (108-158)||(51044534-51044585)
chr4 (119-162)||(54327521-54327564)
chr4 (127-186)||(55372390-55372449)
chr4 (108-186)||(3155547-3155625)
chr4 (108-162)||(21953217-21953271)
chr4 (108-162)||(25487617-25487671)
chr4 (114-212)||(29778746-29778843)
chr4 (112-186)||(29912897-29912970)
chr4 (108-162)||(30338664-30338718)
chr4 (136-186)||(44138712-44138762)
chr4 (133-186)||(19429536-19429589)
chr4 (133-186)||(28581958-28582011)
chr4 (109-162)||(30024645-30024698)
chr4 (121-186)||(43372017-43372082)
chr4 (114-162)||(20936074-20936122)
chr4 (108-199)||(27623579-27623673)
chr4 (133-165)||(31038936-31038968)
chr4 (114-162)||(32724069-32724117)
chr4 (121-185)||(40174520-40174584)
chr4 (108-156)||(47970262-47970310)
chr4 (107-162)||(55437358-55437411)
[»] chr6 (52 HSPs)
chr6 (110-186)||(1402942-1403018)
chr6 (109-186)||(4006659-4006736)
chr6 (108-181)||(10452413-10452486)
chr6 (108-185)||(24670361-24670438)
chr6 (107-186)||(281896-281975)
chr6 (108-186)||(7354148-7354226)
chr6 (108-182)||(29274281-29274355)
chr6 (108-182)||(33787797-33787871)
chr6 (126-186)||(1497943-1498003)
chr6 (119-183)||(3204593-3204657)
chr6 (108-184)||(31420902-31420978)
chr6 (110-185)||(2027455-2027530)
chr6 (108-227)||(2117347-2117466)
chr6 (109-184)||(9093606-9093681)
chr6 (135-186)||(25100014-25100065)
chr6 (112-187)||(31776322-31776396)
chr6 (135-186)||(33828617-33828668)
chr6 (114-184)||(10150302-10150372)
chr6 (108-186)||(32975922-32976000)
chr6 (108-165)||(323755-323812)
chr6 (108-181)||(9668038-9668111)
chr6 (108-184)||(2514646-2514722)
chr6 (110-182)||(4247113-4247185)
chr6 (133-165)||(10154190-10154222)
chr6 (109-165)||(24782004-24782060)
chr6 (133-217)||(32386580-32386664)
chr6 (108-227)||(3155120-3155238)
chr6 (107-162)||(9833169-9833224)
chr6 (139-182)||(9912057-9912100)
chr6 (107-162)||(22742309-22742364)
chr6 (133-180)||(32848650-32848697)
chr6 (108-175)||(33500540-33500607)
chr6 (108-186)||(10016489-10016567)
chr6 (108-186)||(20671913-20671991)
chr6 (108-154)||(24774702-24774748)
chr6 (112-174)||(30865430-30865492)
chr6 (108-158)||(31672544-31672594)
chr6 (141-186)||(1432115-1432160)
chr6 (108-153)||(4420561-4420606)
chr6 (133-186)||(5623125-5623178)
chr6 (135-184)||(7485118-7485167)
chr6 (133-182)||(12757523-12757572)
chr6 (133-182)||(14656297-14656346)
chr6 (108-161)||(24836272-24836325)
chr6 (109-162)||(32513770-32513822)
chr6 (133-181)||(1835983-1836031)
chr6 (133-205)||(3785729-3785801)
chr6 (122-162)||(7713983-7714023)
chr6 (146-182)||(8035200-8035236)
chr6 (107-163)||(9027520-9027576)
chr6 (108-156)||(29957988-29958036)
chr6 (109-186)||(31807894-31807972)
[»] scaffold0508 (1 HSPs)
scaffold0508 (108-186)||(9823-9901)
[»] scaffold0020 (1 HSPs)
scaffold0020 (120-227)||(159980-160086)
[»] scaffold0024 (1 HSPs)
scaffold0024 (108-186)||(27520-27598)
[»] scaffold0654 (1 HSPs)
scaffold0654 (108-182)||(6689-6763)
[»] scaffold0590 (1 HSPs)
scaffold0590 (108-162)||(1146-1200)
[»] scaffold0275 (1 HSPs)
scaffold0275 (108-162)||(2775-2829)
[»] scaffold0014 (1 HSPs)
scaffold0014 (108-182)||(116608-116682)
[»] scaffold0053 (1 HSPs)
scaffold0053 (114-182)||(20129-20197)
[»] scaffold0110 (1 HSPs)
scaffold0110 (108-186)||(4271-4350)
[»] scaffold0199 (1 HSPs)
scaffold0199 (108-184)||(6768-6842)


Alignment Details
Target: chr3 (Bit Score: 340; Significance: 0; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Original strand, 28305999 - 28306367
Alignment:
Q  1 tgaaaattaaactaggattagccttaatccttgtttctataaattaccaacttatttaaaggcttatatatagtgtaagtacttatcgtatgagtgctaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    |||||||||||||||||||||||||| |    
T  28305999 tgaaaattaaactaggattagccttaatccttgtttctataaattaacaacttatttaaaggcttata----gtgtaagtacttatcgtatgagtgctga 28306094  T
Q  101 tataagctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28306095 tataagctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttac 28306194  T
Q  201 aaaaataagcttaaaactgcttatagattgtaaaaccaaataaaatatgttgcgacgtaacagatcttacatttggatagccatccttaggaatatctaa 300  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28306195 agaaataagcttaaaactgcttatagattgtaaaaccaaataaaatatgttgcaacgtaacagatcttacatttggatagccatccttaggaatatctaa 28306294  T
Q  301 gcgcaatatcttcttcacaatgtgagaatttggaacaactggtgctgtttgccaatccatgttcagtcccttc 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28306295 gcgcaatatcttcttcacaatgtgagaatttggaacaactggtgctgtttgccaatccatgttcagtcccttc 28306367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 1816552 - 1816636
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    ||||||||||||||||||||||  |||||| || |||||||||||||||||||||| | ||||||||  |||||||||| |||||    
T  1816552 taaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaac 1816636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 24887409 - 24887318
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||||| |||||||||| |  ||||||||||||||||||| |||||||||| || ||| |||||||||||||||| | | ||||||||    
T  24887409 tataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagctta 24887318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 31337521 - 31337450
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||||| |||||||  |||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  31337521 ctatctctaaaacaaaagataaaataaagtcaaactgtttttatataagttataagttgtattcataagcta 31337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 49587043 - 49586988
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  49587043 ctataagctatttctataacaaaagataaaataaagtcaaactgttttcatataag 49586988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 183
Target Start/End: Complemental strand, 10101601 - 10101527
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    ||||| ||| ||||||||||||  ||||||||||| ||| |||||||||||||| || |||||||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 183
Target Start/End: Complemental strand, 10212526 - 10212452
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    ||||| ||| ||||||||||||  ||||||||||| ||| |||||||||||||| || |||||||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10212452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 36646508 - 36646430
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||||| ||||||  |||||||||||  || ||||||||||||||||| || |||||||||||||||||    
T  36646508 tataagctatttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctat 36646430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 38462225 - 38462303
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| |||||| |||||  |||||||||||||||||||||||||||| | || ||  ||||||||||||||||    
T  38462225 tataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctat 38462303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 40122878 - 40122801
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| || |||||||||  |||||||||||||||||||||||||| ||| || |||||||||| |||||||||    
T  40122878 tataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctat 40122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 27792816 - 27792925
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| || | |||||||  |||||||| |||||||| |||||||||||| | |||||||||||||||| ||||   | |||||||| | |||||    
T  27792816 tataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtagagcttatagaaata 27792915  T
Q  208 agcttaaaac 217  Q
    |||| |||||    
T  27792916 agctgaaaac 27792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 33965604 - 33965524
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatat--aagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||||| ||||||||||||||||||||||||||||  ||| || ||| ||||||||||||||||   ||||||||||    
T  33965604 tataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagctta 33965524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 24235809 - 24235730
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctata 187  Q
    |||||| ||| ||||||||||||  ||| ||||||||||||| |||  ||||||| || |||||||||||||||||||||    
T  24235809 tataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttcataagctata 24235730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 10357378 - 10357452
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    ||||| ||| ||||||||||||  |||||||| || ||| | |||||||||||| ||||||||||||||||||||    
T  10357378 ataagttatttctataacaaaagataaaataatgttaaatttttttcatataagatacaagttgttttcataagc 10357452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 22232770 - 22232848
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| | |||||||||   |||||||||||||||||||||||||||||||   ||| | ||||||||||||||    
T  22232770 tataagctatttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctat 22232848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 38971203 - 38971261
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttac 166  Q
    |||||| |||||||||| |||||| ||||||||||||| |||||||||||| |||||||    
T  38971203 tataagttatctctatatcaaaaaataaaataaagtcatactgttttcatagaagttac 38971261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 42039103 - 42039180
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||| ||||||||| ||||||||||||| | || |||||||| ||||| ||||||||||||| ||||||    
T  42039103 tataagctatttctgtaacaaaaaataaaataaagtcaga-tggtttcatatgagttataagttgttttcattagctat 42039180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 44284184 - 44284134
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  44284184 tataagctatttctataacaaaaaataaaacaaagtcaaactgttttcata 44284134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 20502190 - 20502085
Alignment:
Q  114 ctatctctataacaaaaag-taaaataaagtcaaa-ctgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagct 211  Q
    |||| ||||| |||||||| | ||||||||||||| ||||||||||||| | || ||| |||||||||||||||| | ||||||||||  | ||||||||    
T  20502190 ctatttctatgacaaaaagatcaaataaagtcaaaactgttttcatatacgctataagctgttttcataagctatcctgaagagcttatgagaataagct 20502091  T
Q  212 taaaac 217  Q
     |||||    
T  20502090 gaaaac 20502085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 51278283 - 51278226
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    |||||||||| ||||||||||||  | ||||||||||||||||||||||| |||||||    
T  51278283 tataagctatttctataacaaaatattaaataaagtcaaactgttttcatttaagtta 51278226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 5430970 - 5431030
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaa 168  Q
    ||||||| || ||||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  5430970 tataagccatttctataacagaaagtaaaagaaagtcaaactgtttttatataagctacaa 5431030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 33405287 - 33405215
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| |||||| ||||| |||||||||||| ||  |||||||||||||| || ||| ||||||||||||||||    
T  33405287 ctatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataagctat 33405215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 23249529 - 23249580
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| ||||||||||||||| ||||||| || ||||||||||||||||||||    
T  23249529 aaatgaagtcaaactgtttttatataagatataagttgttttcataagctat 23249580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 41452494 - 41452545
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||||||||||| ||||  ||| ||||||||||||||||    
T  41452494 aaataaagtcaaactgttttcatattagttgtaagctgttttcataagctat 41452545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 42530182 - 42530253
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    |||||| ||||||| ||||||||||||||||| ||| | |||| |||||||||  ||| |||||||||||||    
T  42530182 agctatttctataataaaaagtaaaataaagtaaaattctttttatataagttgtaagatgttttcataagc 42530253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 1395615 - 1395669
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||  ||||||||||||||| | ||||||||||||    
T  1395615 tataagctatttctataacaaaagataaaataaagtcaaattattttcatataag 1395669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 16609992 - 16609950
Alignment:
Q  144 caaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  16609992 caaactgttttcatataagatgcaagttgttttcataagctat 16609950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 21532790 - 21532720
Alignment:
Q  289 aggaatatctaagcgcaatatcttcttcacaatgtgagaatttggaacaactggtgctgtttgccaatcca 359  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||  ||   ||||||| ||||||||||||    
T  21532790 aggaatatccaagcgcaacatcttcttcactatgtgagaatttgagactgttggtgctctttgccaatcca 21532720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 22049261 - 22049303
Alignment:
Q  144 caaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  22049261 caaactgttttcatataagatgcaagttgttttcataagctat 22049303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 22343589 - 22343639
Alignment:
Q  145 aaactgttttcatataagttacaagttgttttcataagctatacagaagag 195  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||| ||||||    
T  22343589 aaactgttttcatataagttataagctgtttccataagctatactgaagag 22343639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 35168735 - 35168665
Alignment:
Q  289 aggaatatctaagcgcaatatcttcttcacaatgtgagaatttggaacaactggtgctgtttgccaatcca 359  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||  ||   ||||||| ||||||||||||    
T  35168735 aggaatatccaagcgcaacatcttcttcactatgtgagaatttgagactgttggtgctctttgccaatcca 35168665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 43116552 - 43116478
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||||| ||||||||||||  |||||| || ||||||  |||||||||||| || |||| |||||||||||||    
T  43116552 taagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagtcgttttcataagct 43116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 43875624 - 43875670
Alignment:
Q  140 aagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctat 43875670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 52618947 - 52619025
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| |||| ||||||   | ||||||||| ||| ||||||||||||||||| ||| |||||||| |||||||    
T  52618947 tataagctatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctat 52619025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 2201097 - 2201150
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||||||||||||||||||||||| || ||| ||||||||| ||||||    
T  2201097 taaaacaaagtcaaactgttttcatataagctataagctgttttcattagctat 2201150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 19679429 - 19679376
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||||||||| |||||| || |||||||||| |||| ||||    
T  19679429 taaaataaagtcaaactgttttcttataagctataagttgtttttataaactat 19679376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 20192732 - 20192679
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataa 161  Q
    |||||||||| | ||||||||||  |||||||||||||||| ||||||||||||    
T  20192732 tataagctatttatataacaaaagataaaataaagtcaaacagttttcatataa 20192679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 237345 - 237457
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagct 211  Q
    |||||| ||||||||| ||  ||||||||| | ||| | | ||||| ||||||| |||||||||||||||| ||| |   |||||||||  |||||||||    
T  237345 agctatttctataacagaagataaaataaaataaaattatattcatgtaagttataagttgttttcataagttatcctatagagcttacggaaataagct 237444  T
Q  212 taaaactgcttat 224  Q
     ||||| ||||||    
T  237445 gaaaacagcttat 237457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 13481253 - 13481309
Alignment:
Q  122 ataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 178  Q
    |||||||||  ||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  13481253 ataacaaaatataaaataaagtcaaactattttcaaataagctacaagttgtcttca 13481309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 15304472 - 15304420
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataa 161  Q
    ||||||||| ||||||||||||  ||||||||||| ||| |||||||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 36783457 - 36783381
Alignment:
Q  111 aagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctata 187  Q
    ||||||| |||||| |||||  ||||||||||| ||| |||||||||||||  ||  || |||||||||||||||||    
T  36783457 aagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctata 36783381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 39343018 - 39343074
Alignment:
Q  142 gtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctt 198  Q
    |||||||| ||||||| ||||||| |||||||||||||||  ||| |||||||||||    
T  39343018 gtcaaactattttcatgtaagttataagttgttttcataaattattcagaagagctt 39343074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 42084377 - 42084301
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||||||| |||||||||||   |||||||| |||||  |||||| ||||||| ||  |||||||||||||||||    
T  42084377 tataagctatttctataacaaaggataaaataatgtcaacttgttttgatataagctattagttgttttcataagct 42084301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 43079688 - 43079756
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 178  Q
    |||||||| ||||||||||||| |||||  |||| |||  |||||||||||||||| ||| ||||||||    
T  43079688 taagctatttctataacaaaaaataaaaggaagttaaatcgttttcatataagttataagctgttttca 43079756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 183
Target Start/End: Complemental strand, 10132844 - 10132769
Alignment:
Q  109 ataagctatctctataacaaaaag-taaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    ||||| ||| ||||||| |||||| |||||||| |  ||| |||||| ||||||| ||||||||||||||||||||    
T  10132844 ataagttatttctataaaaaaaagataaaataatgataaattgtttttatataagatacaagttgttttcataagc 10132769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 19679505 - 19679584
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctata 187  Q
    |||||||||| ||  ||||||||  |||| |||| || ||||| ||||||||||| || ||||||||||||| |||||||    
T  19679505 tataagctatatcagtaacaaaagataaactaaaatcgaactgatttcatataagatataagttgttttcatcagctata 19679584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 21865522 - 21865598
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||  ||||||||||||  ||||| || |||||  |||||||||||||| || |||||||||| |||||||||    
T  21865522 tataagctagttctataacaaaagataaaacaaggtcaa--tgttttcatataagctataagttgttttgataagctat 21865598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 31713959 - 31714006
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||||||||||||| ||| |||||| |||||||||| |||||    
T  31713959 aaataaagtcaaactgttttgatacaagttataagttgttttaataag 31714006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 43038821 - 43038756
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||| || |||||||||| |||||||||    
T  43038821 tctatgacaaaaagtaaaattaagtcaaact-atttcatataagctataagttgtttt-ataagctat 43038756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 51197833 - 51197790
Alignment:
Q  137 ataaagtcaaactgttttcatataagttacaagttgttttcata 180  Q
    |||||| |||| ||||||||||||||||| ||||||||||||||    
T  51197833 ataaagacaaattgttttcatataagttataagttgttttcata 51197790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 905096 - 905042
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||  ||||||||||||||  ||||| ||||||||    
T  905096 tataagctatttctataacaaaagataaaataaagtcaatttgtttgcatataag 905042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 8007821 - 8007767
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||| | ||||||||||||  |||| ||||||||||||||| |||||||||    
T  8007821 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 8007767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 12923451 - 12923377
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||||||||  || ||| ||||  |||||||||||||||||| |||| |||||| || ||||||||||| ||||    
T  12923451 tataagctattgctgtaataaaagataaaataaagtcaaactgctttcttataagctataagttgttttcctaag 12923377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 23315595 - 23315661
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    ||||||||||||||| |||||||||||| | || ||| ||||| |||||||||| |  |||||||||    
T  23315595 taaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagctta 23315661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 41028977 - 41028923
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||   ||||||||||||| ||||||||| |||||    
T  41028977 tataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataag 41028923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 41057023 - 41057061
Alignment:
Q  149 tgttttcatataagttacaagttgttttcataagctata 187  Q
    |||||||||||||| || |||||||||||||||||||||    
T  41057023 tgttttcatataagctataagttgttttcataagctata 41057061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 42809245 - 42809299
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||  ||||||| ||| ||| ||||||||||||||    
T  42809245 tataagctatttctataacaaaagataaaatatagttaaattgttttcatataag 42809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 44374770 - 44374720
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||||||||| ||| ||||||||  ||||||||||||||| ||||||||||    
T  44374770 tataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 47904188 - 47904086
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataa 208  Q
    ||||||||| ||||||||  ||  |||||| || |||| || |||||||||||  || |||| |||||||||||||||   |||||||||||  ||||||    
T  47904188 ataagctatttctataacgcaacataaaatgaaatcaagctattttcatataatctataagtggttttcataagctatcgtgaagagcttacggaaataa 47904089  T
Q  209 gct 211  Q
    |||    
T  47904088 gct 47904086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 21872372 - 21872319
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||| |||||| | |||| ||||||| || ||||||||||||||||||||    
T  21872372 taaaataaggtcaaatttttttgatataagctataagttgttttcataagctat 21872319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 22031165 - 22031218
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||||||||||||||||||  |  || |||||||||||||||||    
T  22031165 taaaataaagccaaactgttttcatataaaatgtaaattgttttcataagctat 22031218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 26492899 - 26492955
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    ||||| |||| |||||| |||| | |||||||||||||||||||||||| ||||||||    
T  26492899 tataaactatttctataccaaata-taaaataaagtcaaactgttttcacataagtta 26492955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 28779327 - 28779368
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgtttt 176  Q
    ||||||||||||||| |||||||||||| || ||||||||||    
T  28779327 aaataaagtcaaactattttcatataagctataagttgtttt 28779368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 30956751 - 30956674
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| |||||| |||||  ||||||||||| ||| ||||||  |||| | || |||||||||||| |||||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctat 30956674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 30972563 - 30972486
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| |||||| |||||  ||||||||||| ||| ||||||  |||| | || |||||||||||| |||||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctat 30972486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 31403302 - 31403371
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttc 177  Q
    |||||||||| || ||| |||||  |||||| |||| ||| ||||||| |||||| ||||||||||||||    
T  31403302 tataagctatttccatatcaaaagataaaatgaagttaaaatgttttcgtataagatacaagttgttttc 31403371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 35364254 - 35364307
Alignment:
Q  126 caaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcat 179  Q
    ||||| |||||||||||| ||| | |||| |||||||||| |||||||||||||    
T  35364254 caaaaggtaaaataaagttaaattatttttatataagttataagttgttttcat 35364307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 37788817 - 37788882
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||  |||||||||||| || | ||||| |||||  || ||||||||||||||||||||    
T  37788817 tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataagctat 37788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 48365005 - 48364928
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    |||||| ||| || |||||||||  ||||||||||||||| ||||||||| || |  | ||||||||||||| |||||    
T  48365005 tataagttatttcgataacaaaagataaaataaagtcaaattgttttcatttacgccataagttgttttcattagcta 48364928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 52597673 - 52597710
Alignment:
Q  149 tgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  52597673 tgttttcatataagttataagatgttttcataagctat 52597710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 53736228 - 53736183
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagtt 164  Q
    ||||||||||||  |||||||| |||||||| ||||||||||||||    
T  53736228 tctataacaaaagataaaataatgtcaaactattttcatataagtt 53736183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 54965475 - 54965524
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||||||||||||||  |||||||||||  |||||||||||| ||||||    
T  54965475 taaaataaagtcaaacaattttcatataaactacaagttgtttccataag 54965524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 1217900 - 1217848
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| ||| ||||||||| ||||||| ||| ||||||||||||||||    
T  1217900 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctat 1217848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 14548822 - 14548738
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    |||||| || |||||  ||||||||||||| || |||||||||||||||| ||| | | ||||||||   ||||||||| |||||    
T  14548822 taaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaac 14548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 21367637 - 21367689
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||| ||||||| |||||  || ||||||||||||||||||||    
T  21367637 aaaataaagttaaattgttttcgtataatgtataagttgttttcataagctat 21367689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 29270321 - 29270245
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaa-actgttttcatataagttacaagttgttttcataagct 184  Q
    ||||||||| ||||||||||| | |||| |||||| || | |||||| ||||| |||| ||| ||||||||||||||    
T  29270321 ataagctatttctataacaaagaataaagtaaagtgaatattgttttgatatacgttataagatgttttcataagct 29270245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 31364845 - 31364897
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatata 160  Q
    |||||||||| | |||||||||| |||||||||||| || | |||||||||||    
T  31364845 tataagctatttttataacaaaaggtaaaataaagttaagcagttttcatata 31364897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 33307542 - 33307498
Alignment:
Q  144 caaactgttttcatataagttacaagttgttttcataagctatac 188  Q
    |||||| |||| |||||||||| ||| ||||||||||||||||||    
T  33307542 caaactatttttatataagttataagatgttttcataagctatac 33307498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 35450553 - 35450605
Alignment:
Q  127 aaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcat 179  Q
    |||||| |||||||||| ||| ||||||| |||||| || |||||||||||||    
T  35450553 aaaaagaaaaataaagtaaaattgttttcttataagctataagttgttttcat 35450605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 44061149 - 44061077
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcata 180  Q
    |||||||||| |||||| |||||  |||||||| || ||| ||||||  |||||| || ||||||||||||||    
T  44061149 tataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcata 44061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 47584420 - 47584464
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgtttt 154  Q
    |||||||| ||||| |||||| ||||||||||||||||| |||||    
T  47584420 taagctatttctatgacaaaaggtaaaataaagtcaaaccgtttt 47584464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 48397590 - 48397666
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||| ||| | ||||| ||||  ||||||||||||||| |||||| || |||| || ||||||||||||| ||||    
T  48397590 tataagttatttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttgttttcattagct 48397666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 17952827 - 17952749
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||||||||||||  ||||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  17952827 tataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctat 17952749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 37053544 - 37053616
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  37053544 ctatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttcattagctat 37053616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 5043661 - 5043608
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5043661 taaaataaagtcaaactgttttcatataagctagaagttgttttcataagctat 5043608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 14666506 - 14666570
Alignment:
Q  122 ataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||  |||||||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaagctat 14666570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 28803632 - 28803541
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||| ||| || |||||||||  |||||||||||||||||| ||||||||||| |||||||||||||| ||| |||| | | ||||||||    
T  28803632 tataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggagagctta 28803541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 10143116 - 10143194
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| ||| ||||||||||||  |||||| ||||||||||||||| ||||||| || ||||| ||||||||||||||    
T  10143116 tataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctat 10143194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 11513858 - 11513920
Alignment:
Q  124 aacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||  ||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctat 11513920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 119 - 207
Target Start/End: Original strand, 3673762 - 3673850
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    ||||||||||||  ||||||||||| ||| ||||||||||||||||| ||||| ||||||| ||||||   ||||||||| || |||||    
T  3673762 tctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcattagctatcttgaagagcttgcagaaata 3673850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 10563684 - 10563576
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| ||||||||||||  ||  ||| ||| ||| ||||||  | ||||||| |||||||||||||||||||| | ||||||||||  ||||||    
T  10563684 tataagctatttctataacaaaagatagtatatagtgaaattgtttttttgtaagttataagttgttttcataagctatgctgaagagcttaagaaaata 10563585  T
Q  208 agcttaaaa 216  Q
    |||| ||||    
T  10563584 agctgaaaa 10563576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 15377709 - 15377817
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||  |||||| ||||   ||||||||||| | | ||||||||||||||||| ||| |||||||||||||||| | || |||||||  ||||||    
T  15377709 tataagctacttctataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcataagctattctgaggagcttatgaaaata 15377808  T
Q  208 agcttaaaa 216  Q
    | |||||||    
T  15377809 aacttaaaa 15377817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 656903 - 656785
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| ||||||||||||  ||||||| | ||||| ||||||| |||||| |  |||||| |||||||||||||   | ||||||||  ||||||    
T  656903 tataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaata 656804  T
Q  208 agcttaaaactgcttatag 226  Q
    || | |||||| |||||||    
T  656803 agatgaaaactacttatag 656785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 33267642 - 33267588
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||    
T  33267642 tataatctatttctataacaaacagtaaaataaagttaaactgttttcatataag 33267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 33942119 - 33942169
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    ||||||||||||||||||||||||| |||| || |||||||||||||||||    
T  33942119 taaaataaagtcaaactgttttcatgtaagctataagttgttttcataagc 33942169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 34055027 - 34054949
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| ||||| ||||||||||||  |||||||||| |||||||||| |||||| | || ||| ||||||||||||||||    
T  34055027 tataggctatttctataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctat 34054949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 37276722 - 37276764
Alignment:
Q  140 aagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataag 37276764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 29430700 - 29430772
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||| |||||| || ||| |||| ||||||    
T  29430700 tataagctatttctataacaaaa-gttaaataaagtcaaactgttttcttataagctataagctgttctcataa 29430772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 35555073 - 35555139
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttt 175  Q
    |||||||||||||||||||||  |  ||||||||| || |||||||||||| |||||||||||||||||    
T  35555073 ctataagctatctctataacatta--taaaataaattcgaactgttttcatgtaagttacaagttgttt 35555139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 5867315 - 5867239
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||| |||| ||||||||   ||||||||| ||| |||||||| |||||||  ||||||||||||||||||||    
T  5867315 taagctatttctaaaacaaaaaaagaaataaagtaaaagtgttttcacataagttttaagttgttttcataagctat 5867239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 42817491 - 42817411
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||| |||||  |||||| ||||||| |||||||||||||||| | ||  |||||||||||||||| | ||||||||||    
T  42817491 tctataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagctta 42817411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 1625871 - 1625922
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctat 1625922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 6988070 - 6988137
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||  ||||||||||||||| | ||||| ||  ||||| ||||||||||||||||||||    
T  6988070 tctataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataagctat 6988137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 31740082 - 31740019
Alignment:
Q  111 aagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgtt 174  Q
    ||||||| |||||||| |||  ||||||||||||||||| |||||||||||| || ||||||||    
T  31740082 aagctatttctataactaaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 33192143 - 33192194
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    |||| ||||||||| ||  |||||||||||||||||||||||||||||||||    
T  33192143 ctatttctataacataagataaaataaagtcaaactgttttcatataagtta 33192194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 35755628 - 35755554
Alignment:
Q  108 tataagctatctctataa-caaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||| ||||||| |||| || |||||||||||||| ||||||||| |||| || ||||||||||||||||    
T  35755628 tataagctatttctataatcaaatag-aaaataaagtcaaattgttttcatgtaagctataagttgttttcataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 5133716 - 5133786
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 178  Q
    |||||||||| ||||||||||||  ||||||||||  |||||||||| ||||||| || ||| ||||||||    
T  5133716 tataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttca 5133786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 18962160 - 18962086
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| | ||||||||||  ||||||||||| |||||||||||||||||| || ||  | ||||||||||||||    
T  18962160 agctatttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctat 18962086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 28933768 - 28933846
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| | ||||||||||  |||||| || ||||| | ||||||| ||||||| || |||||||||||||||||    
T  28933768 tataagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctat 28933846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 29935947 - 29936025
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| |||||||||| || |||||||| |||||| ||||| ||| |||| || ||||| ||||||||||||||    
T  29935947 tataaactatttctataacaacaaataaaataacgtcaaattgtttccatgtaagctataagtttttttcataagctat 29936025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 32098434 - 32098384
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  32098434 tataagctatttctataacaaaagataaaataaagtcaaagtgttttcata 32098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 36863726 - 36863673
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||  |||| |||||||||| || |||||||||||||||||    
T  36863726 taaaataaagtcaaacaatttttatataagttataaattgttttcataagctat 36863673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 40145421 - 40145482
Alignment:
Q  123 taacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    ||||||||  ||||||||||||||  |||||| || ||||||| ||||||||||||||||||    
T  40145421 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagct 40145482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 10769690 - 10769757
Alignment:
Q  113 gctatctctataacaaaaagtaaaataaagtcaaactgttttcatata--agttacaagttgttttca 178  Q
    ||||| |||||||||||| |||| |||||||||||||||| | |||||  ||||| ||||||||||||    
T  10769690 gctatttctataacaaaaggtaacataaagtcaaactgttctaatataagagttataagttgttttca 10769757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 14209223 - 14209275
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||| || |||||||||  ||||||||| ||||||||||||||||||||    
T  14209223 taagctatttcaataacaaaagataaaataaattcaaactgttttcatataag 14209275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 15780031 - 15780124
Alignment:
Q  116 atctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagct 211  Q
    |||||||||||||||  |||||||||   |||| ||||||||||||  || ||||||||||||||||||||   | |||||||| | |||||||||    
T  15780031 atctctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 15780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 25790081 - 25790185
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaact 218  Q
    ||||||| ||||  |||| | ||||||||||||||||||||||| ||||| ||||||  |||| |||| | | ||||||||  |||||||| | |||||     
T  25790081 tctataaaaaaagataaagtgaagtcaaactgttttcatataagctacaaattgtttggataatctatcctggagagcttatgaaaataagttcaaaaca 25790180  T
Q  219 gctta 223  Q
    |||||    
T  25790181 gctta 25790185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 33256695 - 33256759
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    |||||||||| |  |||||||||||||||||||||||||||||  || |||  ||||||||||||    
T  33256695 tctataacaatagataaaataaagtcaaactgttttcatataaactataagcagttttcataagc 33256759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 40837554 - 40837502
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatata 160  Q
    |||||||||| ||||||||||||  |||| |||||||||| ||||||||||||    
T  40837554 tataagctatttctataacaaaagataaattaaagtcaaattgttttcatata 40837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 14278020 - 14277949
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaa-ctgttttcatataagttacaagttgttttca 178  Q
    ||||| |||| |||||||| |||  | ||||||||||||| |||||||||||||||||| | ||||||||||    
T  14278020 tataaactatttctataactaaacattaaataaagtcaaaactgttttcatataagttatatgttgttttca 14277949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 18066099 - 18066150
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| ||| |||||||||||||| || ||| ||||||||||||||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctat 18066150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 33526094 - 33526013
Alignment:
Q  110 taagctatctctataacaaaa---agtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatac 188  Q
    |||||||| ||||||||||||   |  |||||||||||||||| |||||||||| || | ||| | ||||||||||||||||    
T  33526094 taagctatttctataacaaaatatataaaaataaagtcaaactattttcatatatgtaataagcttttttcataagctatac 33526013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 44439486 - 44439407
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctata 187  Q
    |||||| ||| || |||||||||  ||||||||||| ||||||||||  |||||| || || ||||||| ||||||||||    
T  44439486 tataagttatttccataacaaaatataaaataaagttaaactgtttttgtataagctataaattgtttttataagctata 44439407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 7103584 - 7103530
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttg-ttttcataagctat 186  Q
    |||||||||||||||||||||| ||||||| || ||| || ||||||||||||||    
T  7103584 taaaataaagtcaaactgttttaatataagctataagctgtttttcataagctat 7103530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 29633016 - 29633066
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||||| ||| ||||||||||||| || |||||||||||| ||||||||||    
T  29633016 tataagttatttctataacaaaaaatagaataaagtcaaattgttttcata 29633066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 30537651 - 30537537
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataag 209  Q
    |||||||| |||||||| |||  | | |||||||||||| ||||||||||||| || ||| | || || |||||||| | | ||||||||   |||||||    
T  30537651 taagctatttctataactaaagatcatataaagtcaaacagttttcatataagctataagctattctcgtaagctattctggagagcttaatgaaataag 30537552  T
Q  210 cttaaaactgcttat 224  Q
    | |||||| ||||||    
T  30537551 cctaaaacagcttat 30537537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 33944574 - 33944620
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcat 179  Q
    ||||||||||||||| |||||||||||||| || || ||||||||||    
T  33944574 taaaataaagtcaaattgttttcatataagctataaattgttttcat 33944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 37292457 - 37292395
Alignment:
Q  124 aacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||  ||||||||||| ||||| |||||||||||| ||  |||||||||| ||||||||    
T  37292457 aacaaaagataaaataaagtaaaactattttcatataagctattagttgttttcttaagctat 37292395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 43141840 - 43141902
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagag 195  Q
    |||| |||||||||| ||||| |||||||| || ||| |||||||||||||||| | ||||||    
T  43141840 taaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagag 43141902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 43205281 - 43205331
Alignment:
Q  136 aataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||| ||||||||||||||||||| || ||  ||||||||||||||||    
T  43205281 aataaagccaaactgttttcatataagatataatctgttttcataagctat 43205331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 43299525 - 43299451
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagt-tacaagttgttttcataagcta 185  Q
    |||||| | ||||||| ||  ||||||||||||||||||||||  ||||| | || |||||||||||||||||||    
T  43299525 agctatttatataacagaagataaaataaagtcaaactgtttttgtataaatctataagttgttttcataagcta 43299451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 1742157 - 1742080
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| |||| ||||||||||||  |||||| |||||||||| |||  ||||||| || ||| ||||||||||| ||||    
T  1742157 ataaactatttctataacaaaatataaaatgaagtcaaactctttatatataagatataagctgttttcataatctat 1742080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 3458614 - 3458655
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||||  ||||||||||||||||| ||||||||||||    
T  3458614 tataacaaaagataaaataaagtcaaacttttttcatataag 3458655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 10150699 - 10150772
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||| ||| ||||||| ||||  |||||||| || |||  ||||||||| || |||||||||||||||||||    
T  10150699 tataagttatttctataataaaagataaaataacgttaaatggttttcatagaatttacaagttgttttcataa 10150772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 11344409 - 11344340
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 178  Q
    ||||| ||| ||||||||||||  ||||| ||||||||| |||||||||| ||| || || |||||||||    
T  11344409 ataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 17221649 - 17221588
Alignment:
Q  125 acaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| |||||||||||||||| |||| ||||||||| ||  |  ||||||||||||||||    
T  17221649 acaaaaggtaaaataaagtcaaattgttctcatataagctattaagtgttttcataagctat 17221588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 29300630 - 29300667
Alignment:
Q  149 tgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  29300630 tgttttcatgtaagttataagttgttttcataagctat 29300667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 37474701 - 37474778
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| |||| || |||||||||| |||||||||||| | ||||||||||||||  || || |||||||  ||||||||    
T  37474701 ataaactatttcgataacaaaaaataaaataaagtcgatctgttttcatataaactataaattgtttttctaagctat 37474778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 37766759 - 37766820
Alignment:
Q  125 acaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||| ||||||||||||||| ||||||| |||||  || ||||||||||| | ||||||    
T  37766759 acaaaaaataaaataaagtcaaaatgttttcgtataaactataagttgttttcctgagctat 37766820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 43985086 - 43985021
Alignment:
Q  151 ttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaa 216  Q
    ||||| ||||| ||| ||||||||||||||||||||   ||||||||||  |||||||||| ||||    
T  43985086 ttttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaa 43985021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 4026760 - 4026876
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaat 206  Q
    ||||||||||| | |||| |||||  ||||||||||| ||| | ||||   |||| ||| ||| |||||||||||  ||| | ||||| ||||  |||||    
T  4026760 ctataagctatttttatagcaaaagataaaataaagttaaattatttttgcataaattataagctgttttcataaattatcctgaagaacttatgaaaat 4026859  T
Q  207 aagcttaaaactgctta 223  Q
    ||||| |||||||||||    
T  4026860 aagctgaaaactgctta 4026876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 5998828 - 5998754
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| | ||||||||||  ||||||||||| ||||  |||||  |||||||| |||||||||||| |||||||    
T  5998828 tataagctatttttataacaaaagataaaataaagttaaac--ttttc--ataagttataagttgttttcacaagctat 5998754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 9395099 - 9395191
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgcttata 225  Q
    ||||||||||  ||| |||||||||||||  || ||| ||||||||| || ||| | | ||||||||  |||||||||| ||||| |||||||    
T  9395099 taaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaacagcttata 9395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 9878805 - 9878737
Alignment:
Q  111 aagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcat 179  Q
    ||||||| ||||||||||||  ||||||||| ||||||| |||| | ||| | || |||||||||||||    
T  9878805 aagctatttctataacaaaagataaaataaactcaaactatttttacatatgctataagttgttttcat 9878737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 13736392 - 13736300
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgcttataga 227  Q
    |||| |||||||||| |||||| || || || ||| ||||||||||||||||||   ||||||||  |||||||  | ||||| |||||||||    
T  13736392 aaatgaagtcaaactattttcacatcagctataagctgttttcataagctatactagagagcttatgaaaataacttgaaaacagcttataga 13736300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 13864594 - 13864630
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtc 144  Q
    |||||||||| |||||||||||| |||||||||||||    
T  13864594 tataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 25609740 - 25609808
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgtttt 176  Q
    |||||||||| ||||||| ||||  ||||||||||||||  | ||||| |||||| || ||||||||||    
T  25609740 tataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttgtttt 25609808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 35539692 - 35539740
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    ||||||||| ||||||| ||||||||||||||| ||| | |||||||||    
T  35539692 taaaataaaatcaaactattttcatataagttataagctattttcataa 35539740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 39983329 - 39983405
Alignment:
Q  151 ttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgcttataga 227  Q
    |||||||||||| || |||||||||||||||||||| | | |||||| |  ||||||| || ||||  |||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagcttataga 39983405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 40943853 - 40943893
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaac 148  Q
    |||||||||  ||||||||||||| ||||||||||||||||    
T  40943853 tataagctacttctataacaaaaaataaaataaagtcaaac 40943893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 42621618 - 42621650
Alignment:
Q  151 ttttcatataagttacaagttgttttcataagc 183  Q
    ||||||||||||||| |||||||||||||||||    
T  42621618 ttttcatataagttataagttgttttcataagc 42621650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 4855646 - 4855744
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagc 210  Q
    |||||| | ||||||||||| ||||||||||| ||| |||| |||||||||||| ||||||||||||||| |||| |  ||||||||||| ||||||||    
T  4855646 agctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcataaactatcccaaagagcttacagaaataagc 4855744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 41277451 - 41277398
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41277451 taaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctat 41277398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 14295454 - 14295566
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagct 211  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||| ||||||| |||||||| | | |||||||  | || ||||||    
T  14295454 agctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagct 14295553  T
Q  212 taaaactgcttat 224  Q
     ||||| ||||||    
T  14295554 gaaaacagcttat 14295566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 39257512 - 39257438
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    |||| |||||||||||||||||| |||||||||||||||||  |||||||||||  || |||||||||||||||||    
T  39257512 tatatgctatctctataacaaaaggtaaaataaagtcaaac-cttttcatataaactataagttgttttcataagc 39257438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 39823234 - 39823171
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    ||||||||||  |||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  39823234 tataacaaaagataaaataaagtcaaactactttcatataagctacaagttgttttcataagct 39823171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 12407787 - 12407711
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||||||| ||||||||||||  ||||||||||| || |||||||||| ||||||| ||||  ||||||||||||    
T  12407787 tataagctatttctataacaaaagataaaataaagtaaatctgttttcatgtaagttataagtcattttcataagct 12407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 359
Target Start/End: Original strand, 32221009 - 32221104
Alignment:
Q  264 atcttacatttggatagccatccttaggaatatctaagcgcaatatcttcttcacaatgtgagaatttggaacaactggtgctgtttgccaatcca 359  Q
    |||||||| |||||| |  ||| | ||||||||| |||||||| |||||||||||||||||||||||||  |   |||||||| ||||||||||||    
T  32221009 atcttacagttggatggttatcatgaggaatatccaagcgcaacatcttcttcacaatgtgagaatttgagattgctggtgctctttgccaatcca 32221104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 37063200 - 37063125
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    ||||| |||| ||||||||||||  ||||||||||||||||| |||||||||||||| | || || ||||||||||    
T  37063200 tataaactatttctataacaaaagataaaataaagtcaaactattttcatataagttgccagctggtttcataagc 37063125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 28586886 - 28586824
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgtttt 176  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||| ||| ||| ||||||    
T  28586886 ctatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgtttt 28586824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 9703341 - 9703292
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  9703341 taaaataaagtcaaactcatttcatataagctacaagttgttttcataag 9703292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 14599429 - 14599353
Alignment:
Q  110 taagctatctctataacaaaaag--taaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||||| ||||||||||||    |||||| |||||||||||||||||||||||||| |||||||||  |||||||    
T  14599429 taagctatttctataacaaaactgataaaattaagtcaaactgttttcatataagttataagttgtttcgataagct 14599353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 36539715 - 36539780
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctt 198  Q
    |||||||||||||| ||||||||||||||| || |||||||||| ||||| ||| | |||||||||    
T  36539715 taaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagagctt 36539780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 32059690 - 32059642
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||||    
T  32059690 taaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 35135788 - 35135725
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagtt 171  Q
    |||||| ||| ||||||||||||  ||||||||||||||||| |||||||||||| || |||||    
T  35135788 tataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 12975303 - 12975369
Alignment:
Q  120 ctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| | ||||||||| ||||| |||||||||||||| || ||| ||| ||||||||||||    
T  12975303 ctataacaaagaataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctat 12975369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 16889679 - 16889757
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| || |||||||||  |||| | ||||||||||||||| ||| ||| || ||| ||||||||||||||||    
T  16889679 tataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctat 16889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 18704161 - 18704084
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| ||| ||||||||||||  |||| ||||||||| || |||| ||||||| || ||||||||||||||||||||    
T  18704161 tataagttatttctataacaaaagataaa-taaagtcaagctatttttatataagctataagttgttttcataagctat 18704084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 26516344 - 26516422
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||  ||| |||||| |  |||||||||||||||||  |||||||||||||| ||  ||||||||||||||||    
T  26516344 tataagctagttctctaacaatagataaaataaagtcaaactactttcatataagttataaactgttttcataagctat 26516422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 36639473 - 36639567
Alignment:
Q  115 tatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataag 209  Q
    ||||| ||||||||||  ||||||||| ||||| |||||||||| |||||| |   ||||||||||||||||   ||||||||||  ||||||||    
T  36639473 tatctttataacaaaagataaaataaaatcaaaatgttttcatacaagttatagactgttttcataagctatcttgaagagcttatgaaaataag 36639567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 15003626 - 15003549
Alignment:
Q  122 ataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||||  ||||||||| ||||||| | |||||||||| || |||| ||||||||||||||| ||  ||||||||    
T  15003626 ataacaaaagataaaataaaatcaaactctcttcatataagctataagtggttttcataagctatccaagagagctta 15003549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 18543296 - 18543231
Alignment:
Q  135 aaataaagtcaaact-gttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    ||||||||||||||| ||||| ||||||| || |||||||||||||||||||| | | ||||||||    
T  18543296 aaataaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagctta 18543231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 27772739 - 27772686
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||||  ||||||||||| |||||||| ||||||||||||||||||||    
T  27772739 taaaacaaagtataactgttttcaaataagttataagttgttttcataagctat 27772686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 37588475 - 37588370
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaact 218  Q
    ||||||| ||||  |||||| || |||||  ||||||||||||| || |||||||||||||||| ||| | | ||||||||   ||||||||| |||||     
T  37588475 tctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaaca 37588376  T
Q  219 gcttat 224  Q
    ||||||    
T  37588375 gcttat 37588370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 41016149 - 41016198
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    |||||||| |||||||||||||||||||| || |||||||||||| ||||    
T  41016149 aaaataaattcaaactgttttcatataagctataagttgttttcacaagc 41016198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 2933765 - 2933709
Alignment:
Q  120 ctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgtttt 176  Q
    |||||| ||||  |||||| |||| ||||||||||||||||||||| ||||||||||    
T  2933765 ctataataaaagataaaatgaagttaaactgttttcatataagttataagttgtttt 2933709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 3970806 - 3970698
Alignment:
Q  109 ataagctatctctataacaaaaag-taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||| |||| ||||||||| |||| |||||||||||||| ||| |||| |||||  || ||| |  ||||||||||||||| | ||||||||  ||||||    
T  3970806 ataaactatttctataacacaaagataaaataaagtcaatctgctttcttataatctagaagctaatttcataagctatactggagagcttatgaaaata 3970707  T
Q  208 agcttaaaa 216  Q
    |||| ||||    
T  3970706 agctgaaaa 3970698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 9202874 - 9202758
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| ||| || |||||  ||||||||||| ||| ||||||||||||||  | ||| |||||||||||| |||   ||||| ||||  ||||||    
T  9202874 tataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaata 9202775  T
Q  208 agcttaaaactgcttat 224  Q
    ||||  |||| ||||||    
T  9202774 agctggaaacagcttat 9202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 29117045 - 29117002
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||    
T  29117045 tctataacaaaagataaaataaagtcaaactgttttcgtataag 29117002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 31694463 - 31694538
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    ||||||||| ||||||||||||  |||| ||||||||||||||||| ||| ||  || |||||||| || ||||||    
T  31694463 ataagctatgtctataacaaaacataaactaaagtcaaactgtttttatacaaactataagttgttctcttaagct 31694538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 38047981 - 38047890
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||||| ||| ||||||||  ||||||||||||||| | ||||||||||   || | | |||||||||||||||| | | ||||||||    
T  38047981 tataagctatatctctaacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagagctta 38047890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 39750102 - 39750157
Alignment:
Q  123 taacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 178  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| ||  ||||||||    
T  39750102 taacaaaagataaaataaagtcaaactattttcatataagttataacctgttttca 39750157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 40159793 - 40159840
Alignment:
Q  138 taaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    |||||||||| ||||||||||||||||| || | ||||||||||||||    
T  40159793 taaagtcaaattgttttcatataagttataaatcgttttcataagcta 40159840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 40205187 - 40205091
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    |||||||||||| |||||||  ||||| |  ||||||||||||  ||  ||||||||||||||||||| | | |||||||| | ||||||||| |||||    
T  40205187 tctataacaaaaggtaaaattgagtcagatagttttcatataaacta--agttgttttcataagctatcctggagagcttatagaaataagctgaaaac 40205091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 583874 - 583836
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagtt 171  Q
    |||||||||||||||||||||||||||||| || |||||    
T  583874 taaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 2568598 - 2568680
Alignment:
Q  105 agctataagctatctctataacaaaaagtaaaataaagtcaaactgtttt-catataagttacaagttgttttcataagctat 186  Q
    |||||||| |||| |||||||||| |  ||||| ||||| ||| |||||| | |||||| || ||||||||||||||||||||    
T  2568598 agctataaactatttctataacaagatataaaacaaagttaaattgtttttcgtataagctataagttgttttcataagctat 2568680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 7096253 - 7096203
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||||||||| ||||||||||||  ||||||||||||||||  ||||||||    
T  7096253 tataagctatttctataacaaaagataaaataaagtcaaaccattttcata 7096203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 8938617 - 8938699
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    ||||||||||| | ||||||||||||||||| |||  |||||||||| || | ||| |||| |||  |||||||||| |||||    
T  8938617 aaataaagtcacattgttttcatataagttataagcagttttcataaactttgcaggagagtttatgaaaataagctaaaaac 8938699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 8985633 - 8985683
Alignment:
Q  136 aataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||||||| ||||||||||| || |||| | ||||||||||||||    
T  8985633 aataaagtcaaactattttcatataatttgcaagctattttcataagctat 8985683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 10272532 - 10272482
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    |||||| |||||||| ||||||| |||||| || |||||||||||||||||    
T  10272532 taaaattaagtcaaattgttttcgtataagctataagttgttttcataagc 10272482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 17258983 - 17258893
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgcttat 224  Q
    |||||||||||||||| ||||| || ||   | ||| ||||||||||| |||| | ||||||||||  |||||||||| ||||| ||||||    
T  17258983 aaaataaagtcaaactattttcgtacaatcaataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttat 17258893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 19177423 - 19177497
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||| |||| |||| |||| ||  |||||| ||||| ||||||||||||||||| || ||||||||||| ||||    
T  19177423 tataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataagttgttttcgtaag 19177497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 32172597 - 32172675
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| |||| |||||||  |||||| |||||||  ||||| |||||||| || ||| ||||||||||||||||    
T  32172597 tataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctat 32172675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 9634729 - 9634794
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||  | || ||||||| || | |||||||||| |||| ||||||||||||||||||||    
T  9634729 tataacaaaagatgaactaaagtcgaagtattttcatatatgttataagttgttttcataagctat 9634794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 10303751 - 10303817
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||| ||||||||||||  ||||||||||||||| ||||||||| |||  |  ||||||||||||||||    
T  10303751 ctatttctataacaaaagataaaataaagtcaaattgttttcatttaacct--aagttgttttcataag 10303817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 19138816 - 19138767
Alignment:
Q  137 ataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| ||||| |||||||| ||||| || ||||||||||||||||||||    
T  19138816 ataaattcaaattgttttcagataagctataagttgttttcataagctat 19138767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 20982261 - 20982208
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataa 161  Q
    |||||||||| |||||||||||   |||||||||||||| | ||||||||||||    
T  20982261 tataagctatttctataacaaaggataaaataaagtcaacccgttttcatataa 20982208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 34205208 - 34205261
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| |||||||||| | |||| ||||||| || ||||||||||||||||||||    
T  34205208 taaagtaaagtcaaattatttttatataagctataagttgttttcataagctat 34205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 35960359 - 35960435
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| |||| ||||||| ||||  |||||||||||||||||  ||||||||||  || |||||| |||||||||||||    
T  35960359 ataaactatttctataataaaagataaaataaagtcaaact-atttcatataaactataagttgatttcataagctat 35960435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 37526314 - 37526209
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaact 218  Q
    ||||||| ||||  |||||| || |||||  ||||||||||||| || |||||||||||||||| | | | | ||||||||   ||||||||| |||||     
T  37526314 tctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaaca 37526215  T
Q  219 gcttat 224  Q
    ||||||    
T  37526214 gcttat 37526209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 985591 - 985631
Alignment:
Q  122 ataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  985591 ataacaaaagataaaataaagtcaaactgttttcacataag 985631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 6717071 - 6717111
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataa 161  Q
    |||||||||||||||| |||||||||||| || ||||||||    
T  6717071 tataacaaaaagtaaagtaaagtcaaactattgtcatataa 6717111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 14257435 - 14257487
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||| ||||| ||||| ||||||||||| ||| ||||||||||| ||||    
T  14257435 aaaataaattcaaaatgtttccatataagttataaggtgttttcataaactat 14257487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 26209538 - 26209461
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttca-tataagttacaagttgttttcataagctat 186  Q
    |||||| ||| |||||||||| |  |||||||||||| || |||||||| |||||| || ||| ||||||||||||||||    
T  26209538 tataagttatttctataacaaga--taaaataaagtccaattgttttcaatataagctataagctgttttcataagctat 26209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 38338267 - 38338316
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    ||||||||||  ||||||||||||  |||||||||||||||| |||||||||    
T  38338267 ctataagctagttctataacaaaa--taaaataaagtcaaaccgttttcata 38338316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 38831582 - 38831514
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgtttt 176  Q
    |||||||||| ||| | | ||||  ||||||||||||||||||||||| ||||| | | ||||||||||    
T  38831582 tataagctatttctgttataaaagataaaataaagtcaaactgttttcgtataaatgataagttgtttt 38831514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 41017697 - 41017745
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||||||||  ||||| |||||| || ||||||||||||||||    
T  41017697 aaaataaagtcaaaccattttcctataagctataagttgttttcataag 41017745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 41957551 - 41957499
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| ||| ||||||||| ||||||| ||| ||||||||||||||||    
T  41957551 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctat 41957499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 5006635 - 5006558
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||||||  |||||||||||  |||||||||||||||||||||||||||||| || || ||||||||||||||||    
T  5006635 tataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagcta 5006558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 28340522 - 28340431
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||||| |||  |||||| | ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| | | ||||||||    
T  28340522 tataagctatttcttcaacaaacaataaaataaagtcaaactgttttcatgtaagttataagttgttttcagaagctatgctggagagctta 28340431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 9527216 - 9527140
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||| ||||| ||||||||||||  || ||||||||||||||||||||||||||  || ||||||||||||||||||    
T  9527216 tatacgctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 17989136 - 17989049
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataa 208  Q
    ||||||||||  |||||||||||||||||||||||||||||  || || ||||||||||||||| | | ||||||||||  |||||||    
T  17989136 tataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaataa 17989049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 30456572 - 30456498
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| |||| |||||||  ||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||    
T  30456572 agctatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactat 30456498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 1417208 - 1417285
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||| |||| | ||||||||||  ||||||||||||||| ||||||||||||||  | |||||||||||||||||||    
T  1417208 tataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 45593845 - 45593788
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    |||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||    
T  45593845 tataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataagtta 45593788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 46081977 - 46082050
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaa-ctgttttcatataagttacaagttgttttcata 180  Q
    |||||||||| |||||||| |||  ||||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  46081977 tataagctatttctataacgaaagttaaaacaaagtcaaaactgttttcatataagttataagttgttttcata 46082050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 49060484 - 49060556
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcata 180  Q
    |||||||||| ||||||||||||| ||||||||||||||| | |||| ||||||| || ||||| ||||||||    
T  49060484 tataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 3802265 - 3802186
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctata 187  Q
    |||||||||| ||||||| |||| ||||||||||||||||  |||||||||||| ||| ||| |||||| | ||||||||    
T  3802265 tataagctatttctataataaaaggtaaaataaagtcaaatcgttttcatataaattataagctgtttttaaaagctata 3802186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 27481420 - 27481342
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| |||||||||||   |||||  |||||||||||||| |||||||| || ||||| ||||||||||||||    
T  27481420 tataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctat 27481342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 27492739 - 27492817
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| ||||||||||||  | ||||||| ||||||| ||||||||||||| | ||| ||||||||||||||||    
T  27492739 tataaactatttctataacaaaagttcaaataaaatcaaacttttttcatataagtaataagatgttttcataagctat 27492817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 22759132 - 22759221
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||| | ||||||||||  ||||||||||  ||| |||||||||||||| || ||| || ||||||||||||| ||| ||||||||    
T  22759132 taagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctatccaggagagctta 22759221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 27378953 - 27378845
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| ||||| |||||| ||||||||||||  ||||||||||||||||  |||||  ||||||||||| |||| | | ||||||||  ||||||    
T  27378953 tataagctatttctattacaaaa-gtaaaataaagtagaactgttttcatataaactacaatctgttttcataaactatcctggagagcttatgaaaata 27378855  T
Q  208 agcttaaaac 217  Q
    | || |||||    
T  27378854 aactgaaaac 27378845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 31338477 - 31338530
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||    
T  31338477 taaaataaagtcaaactgtttttatataagttataagttgtttccataaactat 31338530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 35536051 - 35536108
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    |||||||||| ||||||||| ||  ||||||||||||||| |||||||||||||||||    
T  35536051 tataagctatttctataacataagataaaataaagtcaaattgttttcatataagtta 35536108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 44910541 - 44910626
Alignment:
Q  101 tataagctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| ||||||| |||||| |||||   |||||||||||||||| |||||| | ||| || ||||||||||||||| ||||    
T  44910541 tataagctagaagctatttctatatcaaaagagaaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactat 44910626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 47046209 - 47046156
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||| |||||||||||||| | | |||||||||||||||||||    
T  47046209 taaaataaagtcaaattgttttcatataagctccgagttgttttcataagctat 47046156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 9872826 - 9872894
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactg-ttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||  |||||||||||||||||| ||||| ||| || ||||||||| |||||||||||||    
T  9872826 tctataacaaaatataaaataaagtcaaactgtttttcgtatgagctacaagttgatttcataagctat 9872894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 39591593 - 39591537
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtt 164  Q
    |||||| ||| ||||||||||||  ||||||||||||||| ||||||||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataagtt 39591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 5369815 - 5369739
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||  ||||||| ||||| |||  ||||||||||||||||||||||| | || ||| ||||||||||||||||    
T  5369815 tataagctaattctataaaaaaaattaa--taaagtcaaactgttttcatatatgctataagctgttttcataagctat 5369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 29363487 - 29363553
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    ||||||||||||||||||||||||||| ||||| ||| |||| ||||||| ||| | | ||||||||    
T  29363487 taaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagctta 29363553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 33894567 - 33894620
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||  |||||||| |||||||||||||||||||||    
T  33894567 tataagctatttctataacaaaagataaaataa-gtcaaactgttttcatataag 33894620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 40439039 - 40439117
Alignment:
Q  149 tgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgcttataga 227  Q
    |||||||||||| |||| ||||||||||||| |||||| | ||||||||||   ||||||| | ||||| |||||||||    
T  40439039 tgttttcatatatgttataagttgttttcattagctatcctgaagagcttatggaaataagttaaaaacagcttataga 40439117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 43312351 - 43312421
Alignment:
Q  289 aggaatatctaagcgcaatatcttcttcacaatgtgagaatttggaacaactggtgctgtttgccaatcca 359  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||  ||   ||||||| ||||||||||||    
T  43312351 aggaatatccaagcgcaacatcttcttcactatgtgagaatttgagactgttggtgctctttgccaatcca 43312421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 45813306 - 45813236
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 178  Q
    |||||||||| |||||| |||||  ||||||||||||||  |||||||||||||  || ||||||||||||    
T  45813306 tataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttgttttca 45813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 30496648 - 30496721
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    ||||| |||| ||||||||||||  ||||||||||||||| ||||||| |||||  || | |||||||||||||    
T  30496648 tataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttgttttcataa 30496721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 31341138 - 31341195
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    |||||||||| | ||||||||||  |||||||||||||||||| ||| ||||||||||    
T  31341138 tataagctatttgtataacaaaagataaaataaagtcaaactggttttatataagtta 31341195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 45777284 - 45777219
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||  |||||| ||||||||||||||||||||||  || ||||||||||| || |||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttttcgtaggctat 45777219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 992025 - 992093
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctata 187  Q
    ||||||||||||| |||||||||| |||| | |||||||||||| || ||  | |||||||||||||||    
T  992025 tctataacaaaaaataaaataaagacaaaatattttcatataaggtataaacttttttcataagctata 992093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 3610866 - 3610758
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| |||| |||||||  |||||| ||| |||||||||||  |||||| || ||||||||||| ||| |||| |   |||||||| | |||||    
T  3610866 tataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagagagcttatagaaata 3610767  T
Q  208 agcttaaaa 216  Q
    |||| ||||    
T  3610766 agctgaaaa 3610758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 23918903 - 23918955
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||| ||||||||| ||||||  ||||||||||||||| ||||||||||||||    
T  23918903 taagttatctctattacaaaagataaaataaagtcaaattgttttcatataag 23918955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 44151592 - 44151528
Alignment:
Q  122 ataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||  || |||||||| ||||||||| |||||||| || ||||||||||||||| ||||    
T  44151592 ataacaaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaactat 44151528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 3241388 - 3241435
Alignment:
Q  111 aagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    ||||||| ||||||||||||   |||||||||||||||||||||||||    
T  3241388 aagctatttctataacaaaataaaaaataaagtcaaactgttttcata 3241435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 7100743 - 7100668
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaact-gttttcatataagttacaagttgttttcataagct 184  Q
    |||||||| | ||||||||||  ||||| ||||||||| | ||||||||||||| |||||  ||||||||||||||    
T  7100743 taagctatttttataacaaaagataaaaaaaagtcaaatttgttttcatataagctacaaaatgttttcataagct 7100668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 11208404 - 11208471
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| |||||||  ||||||||| |||||| ||||||||||||  || | ||||||||||||||||||    
T  11208404 tctacaacaaaagataaaataaactcaaaccgttttcatataaactatatgttgttttcataagctat 11208471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 27548206 - 27548285
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||| ||  || |||||  |||||||||||| || ||||||||| |||| || ||| ||||||||||||||||    
T  27548206 ctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagctat 27548285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 40689107 - 40688996
Alignment:
Q  113 gctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagctt 212  Q
    ||||| |||||| |||||  ||||||||||| ||| | |||||||||||| || ||| ||| |||||||||||| | | | | ||||  ||||||||||     
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctc 40689008  T
Q  213 aaaactgcttat 224  Q
    ||||| ||||||    
T  40689007 aaaacagcttat 40688996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 44821930 - 44821981
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||| ||||||  ||||||||| ||| ||||||||||||||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctat 44821981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 47004033 - 47004108
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    |||||||| |||||||||| |  ||||||||||||||||| |||| |||| |  || ||| |||||||||||||||    
T  47004033 taagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataagctgttttcataagcta 47004108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 5373169 - 5373239
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 178  Q
    |||| ||||| ||||||||||||  |||||||||||| ||   |||| |||||||||| ||||||||||||    
T  5373169 tatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttgttttca 5373239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 7244646 - 7244696
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||||||||| |||||| |||||  ||||| ||||||||||||||||||||    
T  7244646 tataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 7623082 - 7623184
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||| ||| | |||||||||| ||||||||||||| |||| |||| ||||||| |  ||| | ||||||||| ||||   |||||| |||| ||||||    
T  7623082 tataagttatttttataacaaaaggtaaaataaagtccaactctttttatataagctgtaagctattttcataaactatcttgaagagtttacgaaaata 7623181  T
Q  208 agc 210  Q
    |||    
T  7623182 agc 7623184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 24909613 - 24909682
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||| ||| ||||||||||||||     |||||| | |||||||||||| || ||||||||||||||||    
T  24909613 tataagctatttctttaacaaaaagtaaa-----gtcaaattattttcatataagctataagttgttttcataag 24909682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 28178913 - 28178963
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||||||||| ||||||||||||  ||||||||||||| | ||||||||||    
T  28178913 tataagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 39551674 - 39551620
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||  || | |||||| ||||||||||||||||||    
T  39551674 tataagctatttctataacaaaagatatactaaagtaaaactgttttcatataag 39551620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 46104644 - 46104590
Alignment:
Q  157 tataagttacaagttgttttcataagctatacagaagagcttacaaaaataagct 211  Q
    |||||| || |||||||||||||||||||| | ||||||||||  ||||||||||    
T  46104644 tataagctataagttgttttcataagctatgctgaagagcttatgaaaataagct 46104590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 12110329 - 12110382
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||| ||||||  |||||| || ||| ||||||||||||||||    
T  12110329 taaaataaagtcaaattgttttggtataagctataagctgttttcataagctat 12110382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 24363702 - 24363649
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||| |||||| || |||||||| | |||| ||||||||||||||||||||    
T  24363702 taaaatagagtcaatctattttcatacaggttataagttgttttcataagctat 24363649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 43318653 - 43318600
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||| |||||||||||   ||||||||||||||| |||| |||||||||    
T  43318653 ataagctatttctataacaaatgataaaataaagtcaaattgttatcatataag 43318600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 48157235 - 48157130
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaact 218  Q
    ||||||| ||||  ||||||||||| ||| |||||| ||||||| || || ||||||||| ||||||| | | ||| ||||   ||||||||| |||||     
T  48157235 tctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaaca 48157136  T
Q  219 gcttat 224  Q
    ||||||    
T  48157135 gcttat 48157130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 18516349 - 18516297
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||||||| ||| |||||||||| || ||||||||| |||| |||||    
T  18516349 aaaataaagtcaaattgtgttcatataagctataagttgtttccatatgctat 18516297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 27738295 - 27738215
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||| |||||||  ||||||||||||||| |||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  27738295 tctacaacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctatacaggagagctta 27738215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 37842481 - 37842365
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| |||||| |||||  | ||||||||| ||||||| |||  ||||| || ||||||||||||||||||||   ||||| |||| |||||||    
T  37842481 tataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaata 37842382  T
Q  208 agcttaaaactgcttat 224  Q
    |||| ||||||||||||    
T  37842381 agctgaaaactgcttat 37842365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 5756812 - 5756711
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| ||||||||||||  | | ||||||| ||||||||||||||||| ||| ||||||||||| |||||||  | | ||||||||| ||||||    
T  5756812 tataagctatttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttaccaaaata 5756713  T
Q  208 ag 209  Q
    ||    
T  5756712 ag 5756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 6074418 - 6074519
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| ||||||||||||  | | ||||||| |||||||||||||||||| ||  |||||||||| |||||||  | ||||||||||| ||||||    
T  6074418 tataagctatttctataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagagcttaccaaaata 6074517  T
Q  208 ag 209  Q
    ||    
T  6074518 ag 6074519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 28467420 - 28467356
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||||||  ||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 25006149 - 25006082
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| |  |||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  25006149 tctataacagacggtaaaataaagtcaaattgttttcatataagctataagttgttttcataagctat 25006082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 7218200 - 7218122
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| || |||| |||| |||||||||||||||| |||||||||||||| || ||||||||||||||| ||||    
T  7218200 tataatctatttccataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataacctat 7218122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 25005897 - 25005815
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaa 216  Q
    ||||| |||||||  |||||||||||||| || |||||||||||||||||||| | | |||||||| ||||| ||||||||||    
T  25005897 aaaatgaagtcaacttgttttcatataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaa 25005815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 43420202 - 43420280
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| || ||||| |||  ||||||||||||||||| |||| ||||||||| |||||| ||||||||||||||    
T  43420202 tataagctatttccataacgaaagataaaataaagtcaaactttttttatataagttgcaagttattttcataagctat 43420280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 26293231 - 26293182
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  26293231 ataagctatttctataacaaaaagtaaaataaagtcaaattgttttcata 26293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 49517014 - 49517091
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    |||||| ||| ||||||||||||  ||||||||||||||| ||||||||| |||| || ||| |||||||||||||||    
T  49517014 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 17269194 - 17269286
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttac 200  Q
    |||||| ||| |||| |||||||   |||||||||||||| ||||||||||||||  | |||||||||||||||||||| | | |||||||||    
T  17269194 tataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagcttac 17269286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 45107566 - 45107647
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttaca---agttgttttcataagctat 186  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||||||| |   ||| |||||||||||||||    
T  45107566 ctataagctatttctataagaaaaa-taaaataaagtcaaactattttcatataagttataattagtcgttttcataagctat 45107647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 15437910 - 15437985
Alignment:
Q  111 aagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||| || ||  | |||||||||||||| |||||    
T  15437910 aagctatttctataacaaaaaataaaattaagtcaaactgttttcaaatcagccagaagttgttttcataggctat 15437985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 17423065 - 17422986
Alignment:
Q  108 tataagctatctctataacaaaaag-taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||| | |||||||||||| | |||||||||||||| ||| ||||||||||| || |||||||||||||| |||||    
T  17423065 tataagctttttctataacaaaacgataaaataaagtcaagctgatttcatataagctataagttgttttcatatgctat 17422986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 30257652 - 30257743
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgcttat 224  Q
    ||||||||||||||||||||| |||||||| |  ||||||||||||||| |||| | | || ||||| | ||||||||| ||||| ||||||    
T  30257652 taaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttat 30257743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 37272706 - 37272639
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||||||| || ||| |||||||||||    
T  37272706 ctatctctatctcaaaaggtaaaataaagtcaatctgttttcatataagctataagctgttttcataa 37272639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 15360849 - 15360903
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgt 173  Q
    ||||||||||||  |||||||||||||||||||||||||||||| || |||||||    
T  15360849 tctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 35080196 - 35080142
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||    
T  35080196 tataagcaatttctataacaaaaaataaaataaagtcaaactgtttccatataag 35080142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 8130409 - 8130458
Alignment:
Q  137 ataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcataagctat 8130458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 10581178 - 10581125
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||| ||||||| |||| || ||||||||||||||||||||    
T  10581178 taaaataaagtcaaacttttttcatttaagctataagttgttttcataagctat 10581125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 30371105 - 30371166
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||||||||  ||||||||| ||||| |||||||||||||| || ||||||||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataag 30371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 33527272 - 33527199
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||||||| |||| |||||||  ||||||| |||||||||||||||||||||  || ||| ||||||||||||    
T  33527272 ataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataag 33527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 36151631 - 36151562
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttc 177  Q
    |||||||||| || |||||||||  ||||||||||||||| ||||||| ||||||||| || ||||||||    
T  36151631 tataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttc 36151562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 40304180 - 40304107
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||||||| | ||||||||||  ||||||||| ||| | ||||||||||||||||| ||| |||||||||||    
T  40304180 tataagctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttcataa 40304107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 45205037 - 45205090
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||| ||| |||||||| || ||||||||||||||||||||    
T  45205037 taaaataaagtcaaactatttccatataagctagaagttgttttcataagctat 45205090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 1393145 - 1393069
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||||||| | ||||||||||  ||||||||||| || |||||||||| ||||||| ||||  ||||||||||||    
T  1393145 tataagctatttatataacaaaagttaaaataaagtaaatctgttttcatgtaagttataagtcattttcataagct 1393069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 4200173 - 4200289
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||| ||| | ||||||||||  ||||||||||||||  |||||||||||||| || |  |||||||| |||| ||| | | || |||||  ||||||    
T  4200173 tataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctggagggcttatgaaaata 4200272  T
Q  208 agcttaaaactgcttat 224  Q
    |||||||||| ||||||    
T  4200273 agcttaaaacagcttat 4200289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 4548679 - 4548743
Alignment:
Q  123 taacaaaaag-taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| |||||||||||||||||||||| ||| |||| | ||| ||||||||||||||||    
T  4548679 taacaaaaagataaaataaagtcaaactgtttttatacaagtcataagctgttttcataagctat 4548743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 5150906 - 5150982
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataag 209  Q
    ||||||||||||||||| ||||||| ||||||  || |||||||||||||||||   |||||||||| | |||||||    
T  5150906 taaaataaagtcaaactattttcatttaagttgtaatttgttttcataagctatcatgaagagcttatagaaataag 5150982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 46980230 - 46980182
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||||    
T  46980230 taaaataaagacaaactgttttcatataagttataaattgttttcataa 46980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 4034130 - 4034063
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| ||||||||||||||||||| |||| ||| ||||| || |||||  |||||||||||||    
T  4034130 tctataacacaaagtaaaataaagtcaaaatgttatcacataagctataagttactttcataagctat 4034063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 6933087 - 6932996
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    ||||||| || | ||||||||||  ||||||||||||||| |||||||||| ||||||  |||| |||||||||| | | | ||||||||||    
T  6933087 tataagccatttttataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataagttgtcctgaagagctta 6932996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 48830202 - 48830099
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||| ||| ||||| || |||  ||||||||||||||||| |||||||||||| || ||  |||||||||||||||| |  ||||||| | | |||||    
T  48830202 tataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctattctaaagagctaatagaaata 48830103  T
Q  208 agct 211  Q
    ||||    
T  48830102 agct 48830099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 5592786 - 5592708
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagct 211  Q
    |||||||||||| || |||| ||||||||| || |||||||||||||||||||  |  |||||||||  ||||||||||    
T  5592786 taaaataaagtcgaattgttgtcatataagctataagttgttttcataagctagtcttaagagcttatgaaaataagct 5592708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 7262644 - 7262554
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctt 198  Q
    ||||| |||| ||||| |||||| ||| |||||||| ||||||||||||| | |  || ||||| |||||||||||||| | |||||||||    
T  7262644 tataaactatttctatgacaaaatgtataataaagttaaactgttttcattttaagtataagttcttttcataagctatcctgaagagctt 7262554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 12564964 - 12564922
Alignment:
Q  144 caaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  12564964 caaactgttttcatataagctataagttgttttcataagctat 12564922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 25479536 - 25479634
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    |||||||| |||  |||||||| |||||| ||| |||||||| | || |||||||||||||||||||| |   ||||||||  |||||||||| |||||    
T  25479536 tctataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaac 25479634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 30259610 - 30259540
Alignment:
Q  111 aagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    ||||||| ||||||||||||  |||||||||||||||||| ||| ||||||| || ||| ||||| |||||    
T  30259610 aagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataa 30259540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 45999414 - 45999360
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||  ||| |||||||||||||| |||||||||||    
T  45999414 tataagctatttctataacaaaagataagataaagtcaaactgctttcatataag 45999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 5160353 - 5160422
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcata 180  Q
    |||||||||| |||||||||| |  || ||||||||||||||||||| |||||||||| ||| ||||||||||    
T  5160353 tataagctatttctataacaaca--tataataaagtcaaactgtttt-atataagttataagctgttttcata 5160422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 29007840 - 29007771
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcat 179  Q
    |||| ||| ||||||||||||   ||| |||||||||||| |||||||||||| || |||||||||||||    
T  29007840 taagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttgttttcat 29007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 40943510 - 40943445
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgt 173  Q
    |||||| |||||||| |||||||  |||||||||||||||||||||   ||||||||| |||||||    
T  40943510 tataagatatctctacaacaaaagataaaataaagtcaaactgtttaattataagttataagttgt 40943445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 23895280 - 23895332
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatata 160  Q
    |||||||||| ||||||||||||  ||||||||| |||||||||| |||||||    
T  23895280 tataagctatttctataacaaaagataaaataaattcaaactgttctcatata 23895332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 781235 - 781188
Alignment:
Q  119 tctataacaaaaag-taaaataaagtcaaactgttttcatataagtta 165  Q
    ||||||| |||||| ||||||||||| |||||||||||||||||||||    
T  781235 tctataataaaaaggtaaaataaagtgaaactgttttcatataagtta 781188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 9656605 - 9656672
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| |||||| ||||||||||| ||| | |||||||||||| || ||| ||| ||||||||||||    
T  9656605 tctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcataagctat 9656672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 18434590 - 18434503
Alignment:
Q  122 ataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataag 209  Q
    |||||||||  |||||||||||||||||| | ||||||||| || | | | |||||| ||| ||| | | ||||||||||||||||||    
T  18434590 ataacaaaagataaaataaagtcaaactgctctcatataagctatatgctattttcacaagttatcctggagagcttacaaaaataag 18434503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 27887218 - 27887135
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    |||||||||||||||  ||| |||||||| || ||||||||||||||| ||||   | ||||| || ||||||||||| |||||    
T  27887218 aaaataaagtcaaacaatttccatataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaac 27887135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 39777613 - 39777716
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagctta 213  Q
    |||| ||||||||||||  || ||||||||||||||| ||||||| ||| || | | ||||||| |||| ||||  ||||||||||   ||||||||| |    
T  39777613 ctatttctataacaaaagatagaataaagtcaaactgctttcatacaagctatatgatgttttcttaagttataatgaagagcttaaggaaataagctaa 39777712  T
Q  214 aaac 217  Q
    ||||    
T  39777713 aaac 39777716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 44032114 - 44032071
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||    
T  44032114 tctataacaaaagctaaaataaagtcaaattgttttcatataag 44032071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 44940312 - 44940372
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagag 195  Q
    |||||||||||||  ||||||||| |||||||| ||||||||||||||| |||| | ||||||    
T  44940312 taaaataaagtca--ctgttttcaaataagttataagttgttttcataatctatcctgaagag 44940372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 4276762 - 4276684
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| ||||||||||||  ||| ||||||||| |||||||||| ||||| || ||  |||| |||||||||||    
T  4276762 tataaactatttctataacaaaagataatataaagtcatactgttttcacataagctataacctgttctcataagctat 4276684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 4363745 - 4363671
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagag 195  Q
    ||||||||||  | |||||| ||||||||||||||||||||| || ||  | |||||||||||||| | ||||||    
T  4363745 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 4363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 6265038 - 6265084
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgtttt 154  Q
    |||||||||  ||||||||||||| ||||||||||||||| ||||||    
T  6265038 tataagctacttctataacaaaaaataaaataaagtcaaattgtttt 6265084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 15687196 - 15687138
Alignment:
Q  111 aagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaag 169  Q
    ||||||| ||||||||||||  ||||||||||| ||| ||||||| |||||| ||||||    
T  15687196 aagctatttctataacaaaatataaaataaagttaaattgttttcgtataagctacaag 15687138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 23373375 - 23373329
Alignment:
Q  171 tgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    |||||||||||||||| | |||||||||||| ||||||||| |||||    
T  23373375 tgttttcataagctatcctgaagagcttacagaaataagctgaaaac 23373329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 24702204 - 24702257
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataa 161  Q
    ||||||||||| ||||||||||||| | |||||||||||| || |||||||||||    
T  24702204 ctataagctatttctataacaaaaaattaaataaagtcaagct-ttttcatataa 24702257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 34952159 - 34952273
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| |||| | || ||  ||||||||||| ||| |||||||  ||||| |  ||||||||||||||||||||  |  ||| ||||  ||||||    
T  34952159 tataagctatttctagagcagaagttaaaataaagttaaattgttttcgaataagctgtaagttgttttcataagctatcaaagagaacttatgaaaata 34952258  T
Q  208 agcttaaaactgctt 222  Q
    |||| ||||||||||    
T  34952259 agctgaaaactgctt 34952273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 38578471 - 38578581
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta-caaaaat 206  Q
    |||||||||| ||||||||||||  ||| ||||||| ||| | ||||  |||||| || ||||||||| ||||| ||||  ||||||| |||  ||||||    
T  38578471 tataagctatttctataacaaaagataacataaagttaaattatttttgtataagctataagttgtttacataaactattgagaagagtttatgaaaaat 38578570  T
Q  207 aagcttaaaac 217  Q
    ||||| |||||    
T  38578571 aagctcaaaac 38578581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 42556757 - 42556679
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| ||| ||||| ||||||  | ||||||| |||||||  ||| ||||||| || ||||||||||||||||||||    
T  42556757 tataagttatttctatgacaaaagatgaaataaaatcaaactacttttatataagctataagttgttttcataagctat 42556679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 44422668 - 44422746
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagct 211  Q
    ||||||||  |||||||||||||||||||| || ||| | |||| ||||||||| | | ||||||||  ||||||||||    
T  44422668 taaaataatctcaaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagct 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 50319236 - 50319286
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||||||||| ||||||||||||  ||||||||||||||  ||||||||||    
T  50319236 tataagctatttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 4078242 - 4078197
Alignment:
Q  141 agtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| |||||||||||  || ||||||||||||||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctat 4078197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 17631223 - 17631178
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcat 157  Q
    |||||| ||||||||||||  |||||||||||| ||||||||||||    
T  17631223 agctatttctataacaaaagataaaataaagtctaactgttttcat 17631178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 28788639 - 28788610
Alignment:
Q  133 taaaataaagtcaaactgttttcatataag 162  Q
    ||||||||||||||||||||||||||||||    
T  28788639 taaaataaagtcaaactgttttcatataag 28788610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 30815759 - 30815706
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagt 163  Q
    |||||| | ||||||||||||  ||||||||||| ||||| |||||||||||||    
T  30815759 taagctttttctataacaaaagataaaataaagttaaactattttcatataagt 30815706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 47002975 - 47002922
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||| ||| |||||| ||| |||||| || |||||||||||||||||    
T  47002975 taaaataaagttaaattgtttttatacaagttagaaattgttttcataagctat 47002922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 3924571 - 3924655
Alignment:
Q  111 aagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagag 195  Q
    ||||||| ||||||||| ||  |||||| ||| |||||||||||| |||||  ||  ||||||||| ||||||||| | ||||||    
T  3924571 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctgaagag 3924655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 161
Target Start/End: Original strand, 4215341 - 4215369
Alignment:
Q  133 taaaataaagtcaaactgttttcatataa 161  Q
    |||||||||||||||||||||||||||||    
T  4215341 taaaataaagtcaaactgttttcatataa 4215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 161
Target Start/End: Complemental strand, 5941548 - 5941520
Alignment:
Q  133 taaaataaagtcaaactgttttcatataa 161  Q
    |||||||||||||||||||||||||||||    
T  5941548 taaaataaagtcaaactgttttcatataa 5941520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 6292437 - 6292553
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    ||||||| || |||||||||||||  | |||||||||||| | |||||| |||| ||| ||| | ||||| ||| ||||   | ||||||||  ||||||    
T  6292437 tataagccatttctataacaaaaaaaataataaagtcaaattattttcacataacttataagctattttcgtaaactattttggagagcttatgaaaata 6292536  T
Q  208 agcttaaaactgcttat 224  Q
    |||| ||||| ||||||    
T  6292537 agctgaaaacagcttat 6292553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 7274052 - 7273992
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    ||||||||||  | ||||||||||||| |||||||||| |||||| ||| ||||| |||||    
T  7274052 tataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataa 7273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 14630093 - 14630014
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttc--atataagttacaagttgttttcataagctat 186  Q
    |||| |||||||||||||||||  ||||||||||| | ||||||| |  ||||||| || ||| | ||||||||||||||    
T  14630093 ataaactatctctataacaaaagataaaataaagttacactgtttacatatataagctataagctattttcataagctat 14630014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 14737829 - 14737781
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||| ||| ||||||||||||  ||||||||||||||| ||||||||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 15064939 - 15064899
Alignment:
Q  130 aagtaaaataaagtcaaactgttttcatataagttacaagt 170  Q
    |||||||||||| ||||| ||||||||||| ||||||||||    
T  15064939 aagtaaaataaaatcaaattgttttcatattagttacaagt 15064899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 26630413 - 26630461
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||| ||||||||||||| | ||||||||| ||| ||||||||||||||    
T  26630413 ctatttctataacaaaaaatgaaataaagtaaaattgttttcatataag 26630461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 31517862 - 31517750
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagct 211  Q
    |||||| |||| |||||||  ||||||||||| ||| || ||||||||||| || ||| ||| ||||||| || |   | ||||||||  ||||||||||    
T  31517862 agctatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagct 31517763  T
Q  212 taaaactgcttat 224  Q
     ||||| ||||||    
T  31517762 gaaaacagcttat 31517750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 33975545 - 33975581
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttc 155  Q
    |||||| |||||||||||||||| |||||||||||||    
T  33975545 tctatagcaaaaagtaaaataaaatcaaactgttttc 33975581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 34380390 - 34380458
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttc 177  Q
    ||||||||| |||| |||||||  || |||||||||||||||||| ||||||  ||| | |||||||||    
T  34380390 ataagctatttctaaaacaaaagatacaataaagtcaaactgtttgcatatacattatatgttgttttc 34380458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 38867959 - 38867907
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatata 160  Q
    |||||||||| |||||| |||||  | ||||||||||||| ||||||||||||    
T  38867959 tataagctatttctataccaaaagattaaataaagtcaaaatgttttcatata 38867907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 42352026 - 42351982
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    |||| ||||||||||||  ||||||||||||||||| ||||||||    
T  42352026 ctatttctataacaaaagttaaaataaagtcaaactattttcata 42351982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 49557085 - 49557157
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcata 180  Q
    |||||| ||| ||||||||||||  ||||||||||| |||  || ||||| |||| || ||||||||||||||    
T  49557085 tataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttcata 49557157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 29973025 - 29973103
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||| ||||| || |||||||||||||||||| |||||| ||||| || ||||||||||||||||||||    
T  29973025 tataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgttttcataagctat 29973103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 6864586 - 6864507
Alignment:
Q  110 taagctatctctataaca-aaaag--taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||| ||||||||| |||||  ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  6864586 taagctatttctataacataaaaggataaaataaagtcaaactattttcatgtaagttataagttgttttcataagctat 6864507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 7514522 - 7514600
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| |||||| |||||| |||||||| ||  || |||||||||||||| |||||| ||||||||||||||||    
T  7514522 tataagctatttctatagcaaaaactaaaataatgttcaattgttttcatataagctacaagctgttttcataagctat 7514600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 2698738 - 2698791
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  2698738 ataagctatttctatagcaaaaagtaaaataaagtcgaactgttttcatataag 2698791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 13561437 - 13561360
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||| ||||||||| ||| | ||||||||||||| ||||||||||||| ||| || ||||||||| |||||||    
T  13561437 ataagctatttctataacagaaaattaaataaagtcaaattgttttcatataaattataacttgttttcacaagctat 13561360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 26284894 - 26284802
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgcttataga 227  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||| ||| | | | ||||||  |||||||||| |||||  ||||||||    
T  26284894 aaataaagtcaaactgttttcatataaagtacaagttgttttcgtaagttatcctgtatagcttatgaaaataagctgaaaacaacttataga 26284802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 42597345 - 42597420
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    |||||||||| ||||||||||||  ||||||||||| ||| |||||||||  ||| || |||||||||||||||||    
T  42597345 tataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 11795036 - 11795114
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||| | ||||| ||||||  || |||||||||| ||||||||||||||||||| ||| || |||||||||||||    
T  11795036 tataagctttttctatgacaaaacatacaataaagtcacactgttttcatataagttataagctgatttcataagctat 11795114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 33209345 - 33209243
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataa 208  Q
    ||||||||| |||||||  |||  |||||||||||| ||||||||||||||||  || ||| | |||| ||||||||| | | |||||||| ||||||||    
T  33209345 ataagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataagctatttttataagctattccggagagcttataaaaataa 33209246  T
Q  209 gct 211  Q
    |||    
T  33209245 gct 33209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 35869781 - 35869859
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||| || |||| |||||||  ||||||||| ||||||  |||||||||||| || ||||||||||||||||||||    
T  35869781 tataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcataagctat 35869859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 9836955 - 9836902
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| |||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  9836955 taaagtaaagtcaaactattttcatataagttacaacctgttttcataagctat 9836902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 27728142 - 27728069
Alignment:
Q  113 gctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| ||||||| ||||  ||||||||||||||||| |||||||||||  ||  |||||||||||||||||||    
T  27728142 gctatttctataaaaaaagataaaataaagtcaaactattttcatataaagtattagttgttttcataagctat 27728069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 30013175 - 30013240
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| || |||| |||||||||||||| |||||||| || ||| ||||||||||||||||    
T  30013175 tataacaaaaggtcaaattaagtcaaactgtttccatataagctataagctgttttcataagctat 30013240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 34770861 - 34770914
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||| ||||||||| |||| || ||||||||||||||||||||    
T  34770861 taaaataaagtcaaattgttttcatttaagctataagttgttttcataagctat 34770914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 39866860 - 39866744
Alignment:
Q  111 aagctatctctataacaaaaagtaaaataaagtc-aaactgttttcatataagttacaagttgttttc--ataagctatacagaagagcttacaaaaata 207  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||| ||  || || ||||||||  |||||||||   ||||||||||  ||||||    
T  39866860 aagctatctctataacaaaagataaaataaagtcaaaactgttttcataaaaactataaattgttttcatataagctatcttgaagagcttatgaaaata 39866761  T
Q  208 agcttaaaactgcttat 224  Q
    | || ||||| ||||||    
T  39866760 aactgaaaacagcttat 39866744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 30600464 - 30600397
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| |||||| |||||||||||| |||| ||||  ||||||||| |||||||||||||| |||||    
T  30600464 tctatagcaaaaactaaaataaagtcgaactatttttgtataagttataagttgttttcatatgctat 30600397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 1470982 - 1470904
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||||||| ||||  ||||||||||||||| |  ||||||||||| || ||| ||||||||||| ||||    
T  1470982 tataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctat 1470904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 9572839 - 9572885
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcata 180  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||||    
T  9572839 aaaataaattcaaactgttctcatataaggtacaagttgttttcata 9572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 11056789 - 11056723
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 178  Q
    |||||| |||||||||||| | ||||||||||  |||| |||||||||||| || ||||||||||||    
T  11056789 agctatttctataacaaaaggaaaaataaagttgaactattttcatataagctataagttgttttca 11056723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 28769465 - 28769387
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||  ||||||||||   |||||| |||||||||| ||||| |||||| || ||| ||||||||||||||||    
T  28769465 tataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctat 28769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 1561247 - 1561296
Alignment:
Q  137 ataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| ||||| |||||| ||||||| |||||||||||||||||||||||    
T  1561247 ataaactcaaattgttttaatataagctacaagttgttttcataagctat 1561296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 12361136 - 12361225
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagct 197  Q
    |||||| ||| |||||||  |||  |||||| |||||||| |||||||||||||| || ||| |||||||||||| ||| ||| ||||||    
T  12361136 tataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagct 12361225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 16211012 - 16210895
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| ||||||  |||   ||||||||||| | | |||||||||||||| || |||||||||||| || ||||  ||  || ||||| ||||||    
T  16211012 tataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctataagttgttttcaaaacctatctagtggaacttacgaaaata 16210913  T
Q  208 agcttaaaactgcttata 225  Q
    |||| ||||| |||||||    
T  16210912 agctgaaaacagcttata 16210895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 34551077 - 34551166
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagc 210  Q
    ||||||||||  ||| || |||||||| ||||||||| ||||||| ||||||||||| |||| ||| | | ||||||||  |||||||||    
T  34551077 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 34551166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 39551310 - 39551221
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgctt 222  Q
    ||||||||||  ||||||| |||||| ||| || |||||||||||||||||| | | | |||||||| ||||||||| | ||||| ||||    
T  39551310 taaaataaagctaaactgtcttcatacaagctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagctt 39551221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 9834889 - 9834837
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||  |||| |||||||||||||| || ||||||||||||||||||||    
T  9834889 aaaataaaaccaaattgttttcatataagctataagttgttttcataagctat 9834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 11784748 - 11784696
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctata 187  Q
    ||||||||||||||| | |||||||| |||| ||||| |||||||||||||||    
T  11784748 aaataaagtcaaactatcttcatatatgttataagttattttcataagctata 11784696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 31862437 - 31862553
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||| ||| || |||||||||  ||| ||||||||||||| || || |||||| || ||| |||||||||||| ||| |   ||||||||  ||||||    
T  31862437 tataagttatttcaataacaaaagataatataaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaata 31862536  T
Q  208 agcttaaaactgcttat 224  Q
    |||| ||||| ||||||    
T  31862537 agctgaaaacagcttat 31862553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 33912102 - 33912186
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    ||||||||| |||||||||||  |||||||||| ||||||||| ||||||| |||  | |||| ||| ||| ||||||| |||||    
T  33912102 taaaataaactcaaactgtttctatataagttataagttgtttacataagccatattgcagagtttataaagataagctgaaaac 33912186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 41336746 - 41336662
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    ||||||| ||||||| |||||||||||||  || || |||||||||||||||||  || ||||||| |  ||||||||| |||||    
T  41336746 taaaatatagtcaaattgttttcatataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaaaac 41336662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 2091740 - 2091783
Alignment:
Q  143 tcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||||| ||||||| |||||||||||||||||||||||    
T  2091740 tcaaattgttttaatataagctacaagttgttttcataagctat 2091783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 6509426 - 6509338
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    ||||| ||| |||||||||| |  ||||||||||||||| ||| || ||||||| || ||| |||||||||||||||| | | ||||||||    
T  6509426 ataagttatatctataacaaga--taaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagctta 6509338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 8799360 - 8799427
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||  ||||||||||||||||| ||| || |||| ||| ||| |||||| |||||||||    
T  8799360 tctataacaaaagataaaataaagtcaaactatttccagataaattataaggtgtttttataagctat 8799427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 10075677 - 10075574
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| | ||||| |||||   || |||||||||||| |||| |||||||||| ||| | |||||||||||||| |   ||||||||  ||||||    
T  10075677 tataagctatttgtataataaaaacataattaaagtcaaactatttttatataagttataagctattttcataagctatcctagagagcttatgaaaata 10075578  T
Q  208 agct 211  Q
    ||||    
T  10075577 agct 10075574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 10437840 - 10437906
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||  |||||||||||||||||||||| ||||||| |  |||| | |||||||||||||    
T  10437840 tctataacaaaagataaaataaagtcaaactgtttt-atataagctttaagtaggtttcataagctat 10437906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 13652159 - 13652250
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||||| |||||| |||||  |  ||| |||| ||| ||||||||||||||||| || ||||||| ||||||||| | | ||||||||    
T  13652159 tataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagctta 13652250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 13710802 - 13710893
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||||| |||||| |||||  |  ||| |||| ||| ||||||||||||||||| || ||||||| ||||||||| | | ||||||||    
T  13710802 tataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagctta 13710893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 29699209 - 29699268
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 178  Q
    ||||||||||||  ||||||||||||||| |||| |||| ||||||| ||| ||||||||    
T  29699209 tctataacaaaagataaaataaagtcaaaatgttgtcatctaagttataagctgttttca 29699268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 31915395 - 31915304
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||||| ||||||||||||  || |||||||||||| |||||||||| ||| || ||| ||| ||  |||||||| | | ||||||||    
T  31915395 tataagctatatctataacaaaagatagaataaagtcaaattgttttcatacaaggtataagatgtctttgtaagctatcctggagagctta 31915304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 35298604 - 35298525
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttca-tataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||  ||||||||  |||||||||| ||||| ||||||| |||||  || ||||||||||||||||||||    
T  35298604 tataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttgttttcataagctat 35298525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 43704473 - 43704430
Alignment:
Q  139 aaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||||||||||||||||  || ||||||||||||||||    
T  43704473 aaagtcaaactgttttcatataaactataagttgttttcataag 43704430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 4558742 - 4558820
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||||||| ||||  ||||||||||| ||| | |||||||||| | || ||| ||||| ||||||||||    
T  4558742 tataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctat 4558820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 7918899 - 7918821
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| |||||| | |||| ||||||||||| ||| | ||||| | |||| || ||||||||||||||||||||    
T  7918899 tataacctatttctatatcgaaaaataaaataaagttaaatttttttcttgtaagctataagttgttttcataagctat 7918821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 31884538 - 31884616
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| ||| ||||||||||||  |||||| || |  || |||||||||||||| || || |||||||||||||||||    
T  31884538 tataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataaattgttttcataagctat 31884616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 34080392 - 34080314
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||| ||||||||  |||||| |||||||||||||  | |||||| || ||| |||||||||| |||||    
T  34080392 tataagctatttctttaacaaaagataaaatgaagtcaaactgttaccgtataagctataagctgttttcatacgctat 34080314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 35534987 - 35534941
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgtttt 154  Q
    |||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  35534987 tataagctatttctataataaaagttaaaataaagtcaaactgtttt 35534941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 45314366 - 45314324
Alignment:
Q  142 gtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||    
T  45314366 gtcaaattgttttcgtataagttagaagttgttttcataagct 45314324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 1664327 - 1664401
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||||||| | |||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||| |||||    
T  1664327 tataagctatttttataacaaaaggtaaaataaagttgaacttttttc--acaagttaaaagttgttttcacaagct 1664401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 2699250 - 2699307
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    |||||| ||| |||| |||||||  ||||||||||| ||||| |||||||||||||||    
T  2699250 tataagttatttctacaacaaaatataaaataaagttaaactattttcatataagtta 2699307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 5071068 - 5071019
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||||||||||||||| ||||||||||| ||  ||| ||||||||||||    
T  5071068 taaaataaagtcaaacttttttcatataacttgtaagatgttttcataag 5071019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 227
Target Start/End: Original strand, 11183491 - 11183608
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataag 209  Q
    |||||||| |||| ||||| |  ||||| |||||||||||||  |||||| || || ||| |||||||| ||||||  | | ||||||||   |||||||    
T  11183491 taagctatttctaaaacaacagataaaacaaagtcaaactgtcctcatattagctataagctgttttcacaagctaccctggagagcttatggaaataag 11183590  T
Q  210 cttaaaactgcttataga 227  Q
    || ||||| |||||||||    
T  11183591 ctgaaaacagcttataga 11183608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 11764106 - 11764065
Alignment:
Q  124 aacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    |||||| ||||||||||| | |||||||||||||||||||||    
T  11764106 aacaaatagtaaaataaactgaaactgttttcatataagtta 11764065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 26215440 - 26215493
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataa 161  Q
    |||||||||| ||||||||||||  ||||||||||| ||||| ||||| |||||    
T  26215440 tataagctatttctataacaaaagataaaataaagttaaactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 30040670 - 30040598
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||| ||| ||||||||||| | || ||||||||||| |||||||| |||||  || ||||||||||||||||    
T  30040670 ataagttatttctataacaaagaatagaataaagtcaatctgttttc-tataaactataagttgttttcataag 30040598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 34213630 - 34213581
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||||||||||  ||||||||||||||  |||||||||| ||||    
T  34213630 taaaataaagtcaaactactttcatataagttatgagttgttttcgtaag 34213581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 38260501 - 38260550
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||| ||||| ||||||||||||| ||||||| ||||||||||| ||||    
T  38260501 taaaagaaagttaaactgttttcatttaagttataagttgttttcttaag 38260550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 40728543 - 40728498
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgtttt 154  Q
    ||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  40728543 ataagttatttctataacaaaagataaaataaagtcaaactgtttt 40728498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 926432 - 926508
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtc-aaactgttttcatataagttacaagttgttttcataagct 184  Q
    ||||||||| ||||||||| ||  |||||||||||| ||||||||||  ||| |  || ||||||||||||||||||    
T  926432 ataagctatttctataacacaagataaaataaagtcaaaactgtttttgtattatctataagttgttttcataagct 926508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 3537157 - 3537085
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcata 180  Q
    ||||||| || |||||| |||||  ||||||||||||||| ||||||| |||||| || | |||||| |||||    
T  3537157 tataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctataggttgttatcata 3537085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 7645955 - 7645999
Alignment:
Q  141 agtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||| ||||||||| |||| || |||||||||||||||||||    
T  7645955 agtcaaattgttttcatgtaagctataagttgttttcataagcta 7645999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 8062494 - 8062546
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||| ||||||||| |||||||||||||| || ||| |||| |||||||||||    
T  8062494 aaaaaaaagtcaaattgttttcatataagctataagatgttctcataagctat 8062546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 8066954 - 8066910
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    ||||||||||  |||||||||||||||||| ||| ||||||||||    
T  8066954 tataacaaaagataaaataaagtcaaactggttttatataagtta 8066910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 11813194 - 11813122
Alignment:
Q  145 aaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    ||||||||| ||||||| ||| ||  ||||||||||||||||    ||||||||||| ||||||||| |||||    
T  11813194 aaactgtttccatataatttataatctgttttcataagctatcttcaagagcttacagaaataagctgaaaac 11813122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 12225025 - 12224917
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||| ||| ||||  ||||||  ||||||||||||||||| |||||||||  | || ||| |  |||||||||| || | |||||||| | |||||||    
T  12225025 tataagttatttctaagacaaaagataaaataaagtcaaactattttcatatggggtataagctactttcataagccatcctgaagagctcataaaaata 12224926  T
Q  208 agcttaaaa 216  Q
    |||| ||||    
T  12224925 agctgaaaa 12224917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 29342259 - 29342307
Alignment:
Q  138 taaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| ||| | |||||||||||||||||| || ||||||||||||||    
T  29342259 taaagttaaattattttcatataagttacaaattattttcataagctat 29342307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 39561665 - 39561589
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||| |||||||||||   |||||||||||| |  ||||||||| |||  || ||||||||||| ||||||||    
T  39561665 taagctatttctataacaaagtataaaataaagtcgatttgttttcatctaaactataagttgttttcgtaagctat 39561589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 30207685 - 30207620
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||||||||||    
T  30207685 tctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagcta 30207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 7368181 - 7368084
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag-ttacaagttgttttcataagctatacagaagagcttacaaaaa 205  Q
    |||| |||| ||||| | ||||||||||||||||||||| |||||||||||||| ||| ||||||||| |||||||||| |   ||||||||||||||    
T  7368181 ataaactatttctatgataaaaagtaaaataaagtcaaattgttttcatataagcttataagttgtttccataagctattctagagagcttacaaaaa 7368084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 11802479 - 11802594
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| ||||||||||||  ||||||||||||||| | || ||| ||||| |||||||||||||||||||||||   | ||||||||  | ||||    
T  11802479 tataagctat-tctataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatgagaata 11802577  T
Q  208 agcttaaaactgcttat 224  Q
    |||| ||||| ||||||    
T  11802578 agctgaaaacagcttat 11802594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 17884014 - 17884121
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataag 209  Q
    |||||||| ||||||||||||  ||||||||||| ||| ||||||  |||||||||  ||||||||||||||||||||  | ||||||||  ||||| ||    
T  17884014 taagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattag 17884113  T
Q  210 cttaaaac 217  Q
    || |||||    
T  17884114 ctgaaaac 17884121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 36722757 - 36722687
Alignment:
Q  146 aactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaa 216  Q
    |||||||||||||||||||| |||||||||| ||||| ||| | ||||||||||  |||||||||||||||    
T  36722757 aactgttttcatataagttataagttgttttgataagttatcctgaagagcttatgaaaataagcttaaaa 36722687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 49219083 - 49219161
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| ||| ||||||||||||  ||||||||||||||| | |||||||||||| || ||||||||||||||| ||||    
T  49219083 tataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactat 49219161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 10192241 - 10192306
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||  || |||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  10192241 tataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctat 10192306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 21952906 - 21952959
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  21952906 ataagctatttctataacaacaagtaaaataaagtcaaattgttttcatataag 21952959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 49085946 - 49086010
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||||||  |||||||| |||||||| |||||||| |||||| |||||||||||||||||||    
T  49085946 tataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataagcta 49086010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 55870454 - 55870390
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||||||  | |||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  55870454 tataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataagcta 55870390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 2980597 - 2980514
Alignment:
Q  108 tataagctatctctataacaaaaagt-----aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||||||||||||| |     |||||||||||||||| |||||||| |||||| |||||||| |||||||||||    
T  2980597 tataagctatttctataacaaaaaatgaaacaaaataaagtcaaactattttcatacaagttataagttgttctcataagctat 2980514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 10206292 - 10206181
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataag 209  Q
    |||||||| ||||||||||||| |||||||  || ||| ||||| ||||||||||| || |||| ||||||||||||   ||||||||||  || |||||    
T  10206292 taagctatttctataacaaaaactaaaatattgtaaaattgtttacatataagttataatttgtcttcataagctatcatgaagagcttatgaagataag 10206193  T
Q  210 cttaaaactgct 221  Q
     | |||||||||    
T  10206192 ttgaaaactgct 10206181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 24929443 - 24929510
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||| ||||||||||||  |||||||||||| ||||||||||||| ||| || |||||||||||||||    
T  24929443 ctatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataa 24929510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 224
Target Start/End: Complemental strand, 35290288 - 35290197
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgcttat 224  Q
    ||||||||||| ||| ||| ||||||||||||| ||| | ||||||||||||||    |||||||||| |||||||||| ||||| ||||||    
T  35290288 taaaataaagttaaattgtattcatataagttagaagcttttttcataagctatctttaagagcttactaaaataagctgaaaacagcttat 35290197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 3175895 - 3175973
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||  |||||| |||||  ||||||||||||||| ||||||||  ||||||| ||| ||||||||||||||||    
T  3175895 tataagctacttctatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctat 3175973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 22684642 - 22684588
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| |||||||||||  |||||||||||||||| ||||||||||||||    
T  22684642 tataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataag 22684588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 24443982 - 24444060
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||| || |||| |||||||  ||||||||| ||||||  |||||||||||| || ||||||||||||||||||||    
T  24443982 tataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcataagctat 24444060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 46415918 - 46415840
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| || |||||||||  |||||||   |||||||||||||||| |||||| ||||| ||||||||||||||    
T  46415918 tataagctatttcaataacaaaagataaaataggatcaaactgttttcatacaagttataagttcttttcataagctat 46415840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 54325163 - 54325085
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| ||||| ||||||  |||||||||||||||||||||||||||||| || ||| | |||||| |||||||    
T  54325163 tataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctat 54325085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 2996542 - 2996595
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||| ||||||| |||||| |||||||||| ||||||||||||||||||||    
T  2996542 taaaatacagtcaaattgtttttatataagttataagttgttttcataagctat 2996595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 4071832 - 4071905
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctata 187  Q
    |||| ||||||||||||  ||||||||||||||| | |||||||||||| || |||||||| | ||||||||||    
T  4071832 ctatttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgttatgataagctata 4071905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 19691351 - 19691424
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||||||| ||||||| ||||  |||||||||||||| ||||||||||| || ||| |||||| ||||||||    
T  19691351 tataagctatttctataataaaagttaaaataaagtcaacctgttttcatagaaattataagttgatttcataa 19691424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 19701936 - 19702009
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||||||| ||||||| ||||  |||||||||||||| ||||||||||| || ||| |||||| ||||||||    
T  19701936 tataagctatttctataataaaagttaaaataaagtcaacctgttttcatagaaattataagttgatttcataa 19702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 21157737 - 21157826
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactgctt 222  Q
    |||| |||||||||||||||||||| |||| || ||| |||||||||| ||||| | ||||||||||   ||||||||| ||||| ||||    
T  21157737 taaactaaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaataagctaaaaacagctt 21157826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 23819034 - 23819134
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||| ||| || |||||||| | ||||||  ||||||||||||||||||||||||| ||  ||||||||||||||||   |||||||||| | |||||    
T  23819034 tataagttatttccataacaaata-taaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagcttatagaaata 23819132  T
Q  208 ag 209  Q
    ||    
T  23819133 ag 23819134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 52735068 - 52735157
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||| ||| ||||||||  ||||||||||||||| |  |||||||||||||| | ||||||||| ||||||||   ||||||||||    
T  52735068 taagctatttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagctta 52735157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 6364093 - 6364209
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||| ||||||||||||  ||||||||||| ||| | | |||| ||||| || |||   |||||||||||||||  | ||| ||||| ||||||    
T  6364093 tataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctataatggagaacttacgaaaata 6364192  T
Q  208 agcttaaaactgcttat 224  Q
    |||| ||||| ||||||    
T  6364193 agctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 22471300 - 22471348
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  22471300 taaattaaaggcaaactgttttcatataagttataagttgttttcataa 22471348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 42322004 - 42321936
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttc 177  Q
    ||||||||| | |||||||||   ||||||||||||||| ||||||||||||| ||| |||||||||||    
T  42322004 ataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 53626731 - 53626795
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    ||||||||||||  ||||||||| ||||| |||||||||||||| || ||| |||||||||||||    
T  53626731 tctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataagc 53626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 927447 - 927498
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||||||||||||||||||||| || || |||||| ||||||||||    
T  927447 aaataaagtcaaactgttttcatataagctataacttgtttgcataagctat 927498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 8151840 - 8151789
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||||    
T  8151840 taaaatatagtcaagctgttttcatataagtttaaagttgttttcataagct 8151789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 24160620 - 24160545
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    ||||||| | ||||||||||||  ||| ||||| ||||||| ||||||| |||| || ||||||||||||||||||    
T  24160620 ataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctataagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 36460522 - 36460605
Alignment:
Q  100 atataagctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    |||||||||||||| ||| || |||||||||  ||| || ||| || |||||||||||||||| || ||| |||||||||||||    
T  36460522 atataagctataagttatttcgataacaaaagataagatcaagccacactgttttcatataagctataagctgttttcataagc 36460605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 50745946 - 50746017
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||||| | ||||||||||  ||||||||| |||||||||||| ||||||  ||||||||||||| ||||    
T  50745946 taagctatttttataacaaaagataaaataaaatcaaactgtttttatataaactacaagttgtttttataa 50746017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 11698934 - 11698980
Alignment:
Q  139 aaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||||    
T  11698934 aaagtcaaactattttcatatatgttagaagttgttttcataagcta 11698980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 18630625 - 18630715
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||| |||| || |||||||||  ||||||||||||||   ||||||||||||| || |||||||||||| ||||||| ||  ||||||||    
T  18630625 ataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaagctatccaacagagctta 18630715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 29374013 - 29373939
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||| ||||||||| ||  |||||||| |||||| ||| |||||||||| || || |||||||||||||    
T  29374013 tataagctatttctataacagaagataaaataatgtcaaaatgtattcatataagctataatttgttttcataag 29373939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 34744979 - 34744909
Alignment:
Q  289 aggaatatctaagcgcaatatcttcttcacaatgtgagaatttggaacaactggtgctgtttgccaatcca 359  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||  ||   ||||||| ||||||||||||    
T  34744979 aggaatatccaagcgcaacatcttcttcactatgtgagaatttgagactgttggtgctctttgccaatcca 34744909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 35958599 - 35958677
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||||||||| ||  ||||||||||||||| |  ||| ||||||| || ||| ||||||||||||||||    
T  35958599 tataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcataagctat 35958677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 36734848 - 36734890
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataa 161  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  36734848 tctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 44319894 - 44319971
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| ||||||| ||| | |||||||||||| ||||||||||||||||| |||||| | |||| |||||||||    
T  44319894 tataaactatttctataaaaaaga-taaaataaagtcgaactgttttcatataagctacaagctattttgataagctat 44319971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 437533 - 437480
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||| ||| ||| ||||||||||||  ||||||||||||||||||||    
T  437533 taaaataaagttaaattgtgttcatataagttttaagttgttttcataagctat 437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 927261 - 927310
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||| ||||    
T  927261 taaaataaagtcaaattgtttccatataagttataagttgttttcttaag 927310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 5219626 - 5219517
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||| ||||||||||||| ||||  ||||||||||| ||||| ||||||||||| | | ||| | |||||| || ||||    ||||||||| |||||||    
T  5219626 tatatgctatctctataataaaagataaaataaagttaaactattttcatataaataataagctattttcacaaactatcttcaagagcttaaaaaaata 5219527  T
Q  208 agcttaaaac 217  Q
    |||| |||||    
T  5219526 agctaaaaac 5219517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 21952520 - 21952573
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||| || ||||||    
T  21952520 ataagctatttctataacaaaaggtaaaatcaagtcaaactgttatcgtataag 21952573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 13949945 - 13949893
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||||||||||| |||||||||||||| || |||||||||  ||||||||    
T  13949945 taaaataaagtcaaattgttttcatataagctataagttgtttgtataagcta 13949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 24371079 - 24370963
Alignment:
Q  109 ataagctatctctataacaaaaag-taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    ||||||||| |||||||| ||||| ||||||||| ||||| || ||| | | ||| || |||||||||||||||||||| |  || || ||| | |||||    
T  24371079 ataagctatttctataaccaaaagataaaataaattcaaattgcttttacaaaagctataagttgttttcataagctatcctaaatagtttatagaaata 24370980  T
Q  208 agcttaaaactgcttat 224  Q
    |||| ||||| ||||||    
T  24370979 agctgaaaacggcttat 24370963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 46796987 - 46797039
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    ||||||||| ||||  ||||| ||||||||||| |||||||||||||||||||    
T  46796987 taaaataaattcaatatgtttccatataagttataagttgttttcataagcta 46797039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 4191683 - 4191734
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaa-taaagtcaaactgttttcata 158  Q
    |||||||||| ||||||||||||  ||||| |||||||||||||||||||||    
T  4191683 tataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 10812478 - 10812529
Alignment:
Q  134 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    |||| ||||||||| ||||||||||||| ||| |||| ||||||||||||||    
T  10812478 aaaaaaaagtcaaattgttttcatataacttataagtagttttcataagcta 10812529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 18628654 - 18628595
Alignment:
Q  123 taacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||| | |||||| |||||||||||||| |||||||||| ||  ||||||||||||    
T  18628654 taacaaaaggaaaaatatagtcaaactgtttttatataagttataaactgttttcataag 18628595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 42866047 - 42866090
Alignment:
Q  143 tcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||||| ||||||| || ||||||||||||||||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctat 42866090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 46013410 - 46013363
Alignment:
Q  124 aacaaaaagtaaaataaagtcaaactgttttcatataagttacaagtt 171  Q
    |||||||  |||||||||||||||||||||| |||||||||| |||||    
T  46013410 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 46013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 46019750 - 46019664
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||||| |||| |||||||   ||||||||| ||||||||||| ||| ||||   |||||||||||||||| ||| | ||||||||||    
T  46019750 taagctatttctagaacaaaagaaaaaataaagccaaactgtttttatacaagt---aagttgttttcataagttatcccgaagagctta 46019664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 51044585 - 51044534
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaac-tgttttcata 158  Q
    |||||||||| ||||||||||||  |||||||||||||||| ||||||||||    
T  51044585 tataagctatttctataacaaaagataaaataaagtcaaacttgttttcata 51044534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 54327564 - 54327521
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||    
T  54327564 tctataacaaaagataaaacaaagtcaaactgttttcatataag 54327521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 55372449 - 55372390
Alignment:
Q  127 aaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| ||||||||||||||||| || |||||| || || |||| |||||||||||||||    
T  55372449 aaaaattaaaataaagtcaaactattatcatatgagctataagtagttttcataagctat 55372390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 3155547 - 3155625
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| |||||| |||||  ||||||||||| ||| ||||||  || ||| |||||| ||||||||||| ||||    
T  3155547 tataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactat 3155625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 21953217 - 21953271
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||| |||| |||||||||||| | |||||||||||||||| |||| |||||||    
T  21953217 tataaactatttctataacaaaagggaaaataaagtcaaactctttttatataag 21953271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 25487671 - 25487617
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||| |||||||||||||   | ||||||||||||    
T  25487671 tataagctatttctataacaaaaaataaaataaagtcacgtttttttcatataag 25487617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 29778746 - 29778843
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagctt 212  Q
    |||| ||| ||||||||| |||| ||| || ||| |||||||||||||| |  |||||||||||||||||||    ||||||||||  |||||||||||    
T  29778746 ctatttctttaacaaaaa-taaattaaggtgaaattgttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaataagctt 29778843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 186
Target Start/End: Original strand, 29912897 - 29912970
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| |||||| |||||| ||||||||||| ||| ||||||  |||| |||| |||| |||||||||||||||    
T  29912897 agctatttctatagcaaaaaataaaataaagtaaaattgtttt-gtatatgttaaaagtcgttttcataagctat 29912970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 30338718 - 30338664
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||| |||| ||||||||||||  || |||||||| ||||||||||||||||||    
T  30338718 tataaactatttctataacaaaagatagaataaagttaaactgttttcatataag 30338664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 44138712 - 44138762
Alignment:
Q  136 aataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||| ||||||||||||||| || ||  ||||||||||||||||    
T  44138712 aataaagtcaatctgttttcatataagctataaaatgttttcataagctat 44138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 19429589 - 19429536
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||||||||||||||| ||||||||   ||| | ||||||||||||||    
T  19429589 taaaataaagtcaaactgtttttatataagtcgtaagctcttttcataagctat 19429536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 28582011 - 28581958
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||||||| |||||| ||| ||||  ||||||||||| |||||||    
T  28582011 taaaataaagtcaaactattttcagatatgttatgagttgttttcaaaagctat 28581958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 30024645 - 30024698
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||| ||| ||||||||||||  ||||||||||| ||| ||||||||||||||    
T  30024645 ataagttatttctataacaaaagataaaataaagtaaaattgttttcatataag 30024698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 43372082 - 43372017
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||  ||||||| |||||||||||||| ||||||| || ||  || |||||||||||||    
T  43372082 tataacaaaagataaaatacagtcaaactgtttttatataagctataaactgatttcataagctat 43372017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 20936122 - 20936074
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||| ||||||||||||  ||||||||||||||||| ||||||| ||||    
T  20936122 ctatttctataacaaaagataaaataaagtcaaactattttcatgtaag 20936074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 27623579 - 27623673
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag---ttacaagttgttttcataagctatacagaagagctta 199  Q
    |||||| ||| | ||||||||||  ||||||||||||||||| |||| |||||||   | | |||||||||||||||| ||| | | ||||||||    
T  27623579 tataagatatttgtataacaaaagataaaataaagtcaaactattttaatataagctataagaagttgttttcataagttatcctggagagctta 27623673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 31038968 - 31038936
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagtta 165  Q
    ||||||||||||||| |||||||||||||||||    
T  31038968 taaaataaagtcaaattgttttcatataagtta 31038936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 32724069 - 32724117
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||| ||||| ||||||  ||||||||||||||||| ||||||||||||    
T  32724069 ctatttctattacaaaagataaaataaagtcaaactattttcatataag 32724117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 40174520 - 40174584
Alignment:
Q  121 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    |||| |||||| |||| |||||| ||| |||||||||| ||| || ||| |||||||||||||||    
T  40174520 tatagcaaaaaataaattaaagttaaattgttttcataaaagctataagctgttttcataagcta 40174584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 47970262 - 47970310
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttca 156  Q
    |||||||||| ||||||||||||  |||||| |||||||||| ||||||    
T  47970262 tataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 55437411 - 55437358
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||||| |||||||||| |  ||||||||||||||| | ||||||||||||    
T  55437411 ctataagctatttctataacaata--taaaataaagtcaaattattttcatataag 55437358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 1402942 - 1403018
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||| ||||||||||||  ||||||||||| ||||| |||||||||||| || || |||||||||||||||||    
T  1402942 taagctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctat 1403018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 4006659 - 4006736
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| ||| |||||||||||   ||||||||||||||| |||||| ||||||| || ||||||||||||||||||||    
T  4006659 ataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctat 4006736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 10452486 - 10452413
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||| || ||||||||| |||||    
T  10452486 tataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgtttccataa 10452413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 24670361 - 24670438
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    |||||| ||| ||| |||||||||||||||||||||| |||||||||  |||||| |  |||||||||||||||||||    
T  24670361 tataagatatttctgtaacaaaaagtaaaataaagtccaactgtttttttataagctttaagttgttttcataagcta 24670438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 281975 - 281896
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||||  |||||||||||  ||||||||||||||  |||||||||||||| || ||| ||| ||||||||||||    
T  281975 ctataagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctat 281896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 7354148 - 7354226
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| ||||||||||||  ||||||||| || |||| |||||||||||| |||||| ||||||||||| ||||    
T  7354148 tataaactatttctataacaaaagataaaataaaatcgaactattttcatataagatacaagctgttttcataaactat 7354226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 29274355 - 29274281
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||| |||||| |||||  ||||||||||||||| |||||||||||||| || ||  ||||||||||||    
T  29274355 tataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataag 29274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 33787871 - 33787797
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||| |||| ||||||||||||  ||||| ||||||||| || |||||||||||||| ||| ||||||||||||    
T  33787871 tataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataag 33787797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 1497943 - 1498003
Alignment:
Q  126 caaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||  |||||||||| ||||    
T  1497943 caaaaggtaaaataaagtcaaactgttttcatatgagttataagaagttttcataaactat 1498003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 3204657 - 3204593
Alignment:
Q  119 tctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagc 183  Q
    ||||||| ||||  |||||||||||| ||||||||||||||||| || || ||||||||||||||    
T  3204657 tctataataaaagataaaataaagtcgaactgttttcatataagctagaaattgttttcataagc 3204593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 31420902 - 31420978
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||||||| ||||||| |||  |||||||||| ||||||| |||| ||||||| || ||||||||||| ||||||    
T  31420902 tataagctatttctataataaatggtaaaataaaatcaaactatttttatataagatataagttgttttcgtaagct 31420978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 2027530 - 2027455
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagcta 185  Q
    |||||||| | ||||||||||  ||||||||||||||||| |||||||||||  || ||| |||| ||||||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagcta 2027455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 2117347 - 2117466
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||| ||||| ||||| |||||   ||||| ||||||||||| |||||||||||  || |||||||||||||||| ||| |   ||||||||   |||||    
T  2117347 tatacgctatttctatgacaaaggataaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttattgaaata 2117446  T
Q  208 agcttaaaactgcttataga 227  Q
    |||| ||||| |||||||||    
T  2117447 agctaaaaacagcttataga 2117466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 9093681 - 9093606
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    ||||||||| |||||| |||||  ||||||||||| ||| ||||||| |||||| || ||| ||||||||||||||    
T  9093681 ataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 25100014 - 25100065
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| ||||||| |||||||||| |||||| ||||||||||||||||||||    
T  25100014 aaatagagtcaaattgttttcatagaagttataagttgttttcataagctat 25100065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 187
Target Start/End: Complemental strand, 31776396 - 31776322
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctata 187  Q
    |||||| ||||||||| ||| ||||||||||||||| ||||||  ||||| | | |||||||||||||||||||||    
T  31776396 agctatttctataacacaaa-taaaataaagtcaaattgtttttgtataattaataagttgttttcataagctata 31776322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 33828617 - 33828668
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||||||||| ||||||| ||||||||| |||||||||| |||||||||    
T  33828617 aaataaagtcaaattgttttcgtataagttataagttgttttaataagctat 33828668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 10150372 - 10150302
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||| ||||||||||||  |||||| || ||||| ||||||||||| ||||| ||| ||||||||||||||    
T  10150372 ctatatctataacaaaatataaaatcaaatcaaattgttttcatatcagttataagatgttttcataagct 10150302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 32975922 - 32976000
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| ||| ||| ||||||||  |||||||||||||||||||||  ||| |||  | ||||||||||||||||||||    
T  32975922 tataagttatttctgtaacaaaatataaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctat 32976000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 323755 - 323812
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    |||||||||| ||||||  ||||  ||||||||| |||||||||||||||||||||||    
T  323755 tataagctatttctatattaaaagataaaataaattcaaactgttttcatataagtta 323812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 9668111 - 9668038
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    |||||||||| | ||||||||||  ||| ||| |||| || |||||||||||||| ||||| ||||||||||||    
T  9668111 tataagctatttgtataacaaaagataacatagagtcgaattgttttcatataagctacaatttgttttcataa 9668038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 2514646 - 2514722
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    |||||||||| ||||||| ||||  |||||||||||||||||  ||| |||| || || ||||| ||||||||||||    
T  2514646 tataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagttattttcataagct 2514722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 4247185 - 4247113
Alignment:
Q  110 taagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||| ||||||||||||  ||||||| |||    |||||||||||||||||| ||| ||||||||||||    
T  4247185 taagctatttctataacaaaagataaaatagagttggtctgttttcatataagttataagctgttttcataag 4247113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 10154190 - 10154222
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagtta 165  Q
    |||||||||||||||||||||||||||||||||    
T  10154190 taaaataaagtcaaactgttttcatataagtta 10154222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 24782004 - 24782060
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagtta 165  Q
    ||||||||| ||||||||||||  |||||| || ||||| |||||||||||||||||    
T  24782004 ataagctatttctataacaaaagataaaatcaaatcaaattgttttcatataagtta 24782060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 32386664 - 32386580
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaac 217  Q
    |||||||| |||||| |||||||||||||| || | ||||||||||| || ||| | | ||||||||  |||||||||| |||||    
T  32386664 taaaataaggtcaaattgttttcatataaggtatacgttgttttcattagttatcctggagagcttatgaaaataagctgaaaac 32386580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 3155120 - 3155238
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaata 207  Q
    |||||||||||||| | ||||||  ||||| ||||||||||||||| |||||||  || ||| | |||||||||| ||| | | ||||| ||   |||||    
T  3155120 tataagctatctcttttacaaaagataaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagagc-tatggaaata 3155218  T
Q  208 agcttaaaactgcttataga 227  Q
    |||| ||||| |||||||||    
T  3155219 agctgaaaacagcttataga 3155238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 9833224 - 9833169
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||| ||| ||||| |||| || ||||||||||||||||||||||| ||||||    
T  9833224 ctataagatatttctattacaataaataaaataaagtcaaactgttttcttataag 9833169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 9912100 - 9912057
Alignment:
Q  139 aaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||    
T  9912100 aaagtcaaattgttttcgtataagttacaagttattttcataag 9912057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 22742309 - 22742364
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||||||||| | |||||||||   ||||||||||||||| ||||||||||||||    
T  22742309 ctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataag 22742364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 32848697 - 32848650
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcata 180  Q
    |||||||||||||| |||||||||||||||||| || || ||||||||    
T  32848697 taaaataaagtcaatctgttttcatataagttataaatttttttcata 32848650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 33500607 - 33500540
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttt 175  Q
    |||||||||| ||||||||||||  |||| |||| |||||||||||  |||||||||| ||| |||||    
T  33500607 tataagctatttctataacaaaagataaagtaaaatcaaactgtttcaatataagttataagctgttt 33500540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 10016489 - 10016567
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| |||| | |||||  ||||||||| | |||||||| |||||||||  | ||| ||||||||||||||||    
T  10016489 tataagctatttctaaaccaaaagataaaataaatttaaactgttctcatataagccataagctgttttcataagctat 10016567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 20671991 - 20671913
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| |||| | |||||  ||||||||||||||| ||||||| |||||| |  || |||||||||||| ||||    
T  20671991 tataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactat 20671913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 24774702 - 24774748
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgtttt 154  Q
    ||||| |||| ||||||||||||  ||||||||||||||||||||||    
T  24774702 tataaactatttctataacaaaatataaaataaagtcaaactgtttt 24774748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 30865430 - 30865492
Alignment:
Q  112 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgtt 174  Q
    |||||| ||||||||||||  |||||||||||||||||||   |||||| |||| ||||||||    
T  30865430 agctatttctataacaaaagataaaataaagtcaaactgtgaccatataggttataagttgtt 30865492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 31672594 - 31672544
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcata 158  Q
    ||||| |||| || || ||||||| ||||||||||||||||||||||||||    
T  31672594 tataaactatttccatgacaaaaaataaaataaagtcaaactgttttcata 31672544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 1432115 - 1432160
Alignment:
Q  141 agtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||||| |||||||||| | |||| ||||||||||||||||||||    
T  1432115 agtcaaattgttttcatacatgttataagttgttttcataagctat 1432160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 4420561 - 4420606
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttt 153  Q
    |||||||||  ||||||||||||  |||||||||||||||||||||    
T  4420561 tataagctacttctataacaaaagataaaataaagtcaaactgttt 4420606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 5623125 - 5623178
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||||||| ||||  ||||||||||||  || ||||||||||||||||||||    
T  5623125 taaaataaagccaaatagttttcatataaactataagttgttttcataagctat 5623178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 7485167 - 7485118
Alignment:
Q  135 aaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
    ||||||||| ||| | |||||||||||| || ||||||||||||||||||    
T  7485167 aaataaagttaaatttttttcatataagctataagttgttttcataagct 7485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 12757523 - 12757572
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||||||||||  ||||||||||||||  |||||||||| ||||    
T  12757523 taaaataaagtcaaactactttcatataagttatgagttgttttcgtaag 12757572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 14656346 - 14656297
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||||||||||||||||  ||||||||||||||  |||||||||| ||||    
T  14656346 taaaataaagtcaaactactttcatataagttatgagttgttttcgtaag 14656297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 24836325 - 24836272
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataa 161  Q
    |||||| ||| ||||||||||||  ||||||||||||||| ||||||| |||||    
T  24836325 tataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataa 24836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 32513770 - 32513822
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    ||||| ||| ||||||||||||| ||||||||||||||||| ||| ||||||||    
T  32513770 ataagttatttctataacaaaaa-taaaataaagtcaaactatttccatataag 32513822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 1836031 - 1835983
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataa 181  Q
    ||||||||||||||| |||  ||||||||| |||||| |||||||||||    
T  1836031 taaaataaagtcaaaatgtcgtcatataagctacaagatgttttcataa 1835983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 3785801 - 3785729
Alignment:
Q  133 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaa 205  Q
    ||||||||||| ||||||||||| |||||| || ||| ||||||  |||||||| | | |||||||| |||||    
T  3785801 taaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctattctggagagcttataaaaa 3785729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 7713983 - 7714023
Alignment:
Q  122 ataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||  ||||||||||||||| ||||||||||||||    
T  7713983 ataacaaaagataaaataaagtcaaattgttttcatataag 7714023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 8035236 - 8035200
Alignment:
Q  146 aactgttttcatataagttacaagttgttttcataag 182  Q
    ||||||||||||||||| || ||||||||||||||||    
T  8035236 aactgttttcatataagctagaagttgttttcataag 8035200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 9027520 - 9027576
Alignment:
Q  107 ctataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagt 163  Q
    ||||||||||| |||| || | ||  |||||||||||||||||||||| ||||||||    
T  9027520 ctataagctatttctacaatagaagataaaataaagtcaaactgttttaatataagt 9027576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 29958036 - 29957988
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttca 156  Q
    |||| ||||| | |||||||||| ||||||||||||| |||||||||||    
T  29958036 tatatgctatttttataacaaaaggtaaaataaagtcgaactgttttca 29957988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 31807972 - 31807894
Alignment:
Q  109 ataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttaca--agttgttttcataagctat 186  Q
    ||||||| | |||| |||||||| ||||||||||||||| || |||||||||| ||| |  || ||||||||||||||||    
T  31807972 ataagctctttctagaacaaaaaataaaataaagtcaaaatg-tttcatataaattataagagctgttttcataagctat 31807894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 9901 - 9823
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| ||| ||||||||||||| |||||| ||||||||  |||||||||||||||| | ||||||||||||| ||||    
T  9901 tataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataagttataggttgttttcataatctat 9823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 160086 - 159980
Alignment:
Q  120 ctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacaaaaataagcttaaaactg 219  Q
    ||||| |||||  ||||||||||||||||||  | ||||||||||| ||| |||||||||||||||| |  ||||||||    ||||||||| |||||||    
T  160086 ctatagcaaaagataaaataaagtcaaactgaat-catataagttataagatgttttcataagctatcctaaagagcttgtggaaataagctgaaaactg 159988  T
Q  220 cttataga 227  Q
    ||||||||    
T  159987 cttataga 159980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 27520 - 27598
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    |||||| ||| ||||||||| ||  ||||||||||||||| |||||||||||||  || ||||||||||||||| ||||    
T  27520 tataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactat 27598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 6763 - 6689
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||| |||| ||||||||||||| |||| | |||||||| |||||||||| | |||| |||||||||| |||||    
T  6763 tataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgttttgataag 6689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 1200 - 1146
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||  ||||||||||||||||| || |||||||||    
T  1200 tataagctatttctataacaaaagataaaataaagtcaaactattctcatataag 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 2775 - 2829
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 162  Q
    |||||||||| ||||||||||||  ||||||||||||||||| || |||||||||    
T  2775 tataagctatttctataacaaaagataaaataaagtcaaactattctcatataag 2829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 116682 - 116608
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    ||||| |||| ||||||||||||| |||| | |||||||| |||||||||| | |||| |||||||||| |||||    
T  116682 tataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgttttgataag 116608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 20129 - 20197
Alignment:
Q  114 ctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 182  Q
    |||| |||||||| |||  |||||||||||||||| ||| ||||||||| ||  |||||||||||||||    
T  20129 ctatttctataaccaaagataaaataaagtcaaacagttatcatataagctattagttgttttcataag 20197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 4350 - 4271
Alignment:
Q  108 tataagctatctctataacaaaaag-taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 186  Q
    ||||| |||| ||||||| ||| || |||||||||||||||| ||||||||||||  || ||| |||||| |||||||||    
T  4350 tataatctatttctataaaaaagagataaaataaagtcaaaccgttttcatataaactataagctgttttaataagctat 4271  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 6768 - 6842
Alignment:
Q  108 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagct 184  Q
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T  6768 tataagctatttttataacaaaaggtaaaataaagttgaacttttttc--acaagttaaaagttgttttcacaagct 6842  T

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