View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17275_low_24 (Length: 363)

Name: NF17275_low_24
Description: NF17275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17275_low_24
NF17275_low_24
[»] chr1 (35 HSPs)
chr1 (1-345)||(44720547-44720891)
chr1 (2-345)||(11060462-11060826)
chr1 (178-345)||(50107078-50107245)
chr1 (2-140)||(11059924-11060062)
chr1 (208-347)||(8975238-8975377)
chr1 (184-345)||(11059704-11059858)
chr1 (242-348)||(33342494-33342600)
chr1 (184-342)||(29766007-29766165)
chr1 (1-200)||(50106864-50107063)
chr1 (184-346)||(44719430-44719592)
chr1 (292-339)||(5782501-5782548)
chr1 (40-127)||(29766217-29766304)
chr1 (184-252)||(1407802-1407870)
chr1 (184-251)||(1001326-1001393)
chr1 (208-339)||(22857484-22857615)
chr1 (178-339)||(6612506-6612658)
chr1 (178-337)||(3117738-3117897)
chr1 (46-101)||(7945321-7945376)
chr1 (209-339)||(22856767-22856895)
chr1 (184-255)||(25038052-25038123)
chr1 (184-255)||(25043264-25043335)
chr1 (5-83)||(8975520-8975598)
chr1 (178-255)||(7944306-7944383)
chr1 (178-255)||(9339797-9339874)
chr1 (178-254)||(26518261-26518337)
chr1 (178-269)||(6613862-6613953)
chr1 (22-93)||(7944489-7944560)
chr1 (179-249)||(5782551-5782621)
chr1 (185-255)||(9340927-9340997)
chr1 (184-254)||(11830061-11830131)
chr1 (178-255)||(32665664-32665742)
chr1 (184-265)||(534429-534510)
chr1 (292-329)||(1407737-1407774)
chr1 (46-95)||(9340787-9340836)
chr1 (41-86)||(34088200-34088245)
[»] chr7 (54 HSPs)
chr7 (59-345)||(25621473-25621763)
chr7 (1-196)||(8870246-8870441)
chr7 (184-345)||(24288747-24288908)
chr7 (212-345)||(27067863-27067996)
chr7 (212-345)||(27210317-27210450)
chr7 (2-192)||(8879204-8879393)
chr7 (2-103)||(24287787-24287888)
chr7 (19-96)||(30924736-30924813)
chr7 (182-345)||(30917794-30917956)
chr7 (178-255)||(12223574-12223651)
chr7 (285-348)||(33060888-33060951)
chr7 (184-254)||(384991-385061)
chr7 (184-348)||(24287558-24287722)
chr7 (184-339)||(8048665-8048820)
chr7 (184-255)||(43461618-43461689)
chr7 (224-345)||(8879464-8879585)
chr7 (178-255)||(30924904-30924981)
chr7 (178-255)||(33607389-33607466)
chr7 (20-85)||(44529626-44529691)
chr7 (208-255)||(43457619-43457666)
chr7 (185-255)||(7258426-7258496)
chr7 (185-255)||(10898975-10899045)
chr7 (291-329)||(34707698-34707736)
chr7 (46-96)||(35728024-35728074)
chr7 (185-255)||(48788574-48788644)
chr7 (208-345)||(22621208-22621345)
chr7 (178-255)||(44334345-44334422)
chr7 (210-254)||(9365199-9365243)
chr7 (185-256)||(46286673-46286744)
chr7 (304-339)||(48788673-48788708)
chr7 (108-181)||(329998-330072)
chr7 (301-339)||(8375001-8375039)
chr7 (158-196)||(8870845-8870883)
chr7 (185-255)||(35727849-35727919)
chr7 (305-339)||(43461730-43461764)
chr7 (185-255)||(44333288-44333358)
chr7 (185-251)||(48646204-48646269)
chr7 (185-255)||(48647345-48647415)
chr7 (40-85)||(7259433-7259478)
chr7 (304-345)||(24844654-24844695)
chr7 (185-238)||(24934965-24935018)
chr7 (208-249)||(34710308-34710349)
chr7 (46-95)||(42477707-42477756)
chr7 (292-329)||(44529125-44529162)
chr7 (54-95)||(45584251-45584292)
chr7 (46-95)||(48646376-48646425)
chr7 (22-95)||(48787611-48787684)
chr7 (184-248)||(2677094-2677158)
chr7 (299-339)||(6680529-6680569)
chr7 (299-339)||(13578317-13578356)
chr7 (208-248)||(24935617-24935657)
chr7 (227-339)||(34888847-34888959)
chr7 (22-82)||(44334181-44334241)
chr7 (20-80)||(48647163-48647223)
[»] chr8 (45 HSPs)
chr8 (3-329)||(31074990-31075316)
chr8 (27-345)||(9625271-9625587)
chr8 (1-202)||(31074255-31074457)
chr8 (184-345)||(28524839-28525000)
chr8 (4-198)||(28062891-28063086)
chr8 (80-345)||(24199015-24199278)
chr8 (3-263)||(36032869-36033130)
chr8 (4-198)||(28005588-28005783)
chr8 (2-196)||(12637438-12637633)
chr8 (184-282)||(39138545-39138643)
chr8 (59-202)||(28525018-28525162)
chr8 (22-255)||(28526269-28526496)
chr8 (224-345)||(9626382-9626502)
chr8 (208-345)||(31074075-31074212)
chr8 (178-345)||(28006471-28006637)
chr8 (178-345)||(28063774-28063940)
chr8 (178-255)||(41121276-41121353)
chr8 (178-255)||(41122637-41122714)
chr8 (217-328)||(28005441-28005552)
chr8 (217-328)||(28062744-28062855)
chr8 (184-267)||(41754127-41754210)
chr8 (185-254)||(2552186-2552254)
chr8 (184-265)||(41754687-41754768)
chr8 (185-249)||(30134743-30134807)
chr8 (184-255)||(32898346-32898417)
chr8 (185-252)||(45476336-45476403)
chr8 (37-147)||(28006313-28006423)
chr8 (37-147)||(28063616-28063726)
chr8 (297-339)||(28619539-28619581)
chr8 (178-268)||(33315016-33315106)
chr8 (178-255)||(5737898-5737975)
chr8 (178-255)||(10406357-10406434)
chr8 (303-339)||(5965442-5965478)
chr8 (43-95)||(32898188-32898240)
chr8 (301-336)||(1952968-1953003)
chr8 (46-101)||(10406512-10406567)
chr8 (20-86)||(1952705-1952771)
chr8 (185-255)||(1952872-1952942)
chr8 (20-98)||(10407304-10407382)
chr8 (178-236)||(13144530-13144588)
chr8 (184-253)||(2561339-2561408)
chr8 (90-198)||(9626210-9626319)
chr8 (20-101)||(32564201-32564282)
chr8 (22-75)||(39138235-39138288)
chr8 (20-96)||(35177720-35177796)
[»] chr4 (29 HSPs)
chr4 (208-345)||(32244593-32244730)
chr4 (184-343)||(32244357-32244516)
chr4 (2-195)||(24745736-24745929)
chr4 (2-195)||(24753236-24753430)
chr4 (187-345)||(21623001-21623159)
chr4 (184-343)||(24745956-24746115)
chr4 (208-345)||(21621904-21622041)
chr4 (209-345)||(24753466-24753603)
chr4 (182-345)||(2786302-2786467)
chr4 (184-339)||(19050325-19050478)
chr4 (209-339)||(39869007-39869137)
chr4 (27-95)||(21622192-21622260)
chr4 (183-254)||(25810314-25810384)
chr4 (184-255)||(47874714-47874785)
chr4 (178-328)||(6039219-6039369)
chr4 (185-255)||(20599788-20599858)
chr4 (178-239)||(4703092-4703153)
chr4 (305-346)||(25810415-25810456)
chr4 (178-255)||(42278200-42278277)
chr4 (247-339)||(26170727-26170819)
chr4 (299-339)||(26685418-26685458)
chr4 (208-256)||(31844869-31844917)
chr4 (299-339)||(53770420-53770460)
chr4 (20-171)||(21622821-21622970)
chr4 (185-255)||(47878386-47878456)
chr4 (187-249)||(48739944-48740006)
chr4 (292-337)||(4703206-4703251)
chr4 (299-339)||(48740016-48740056)
chr4 (299-339)||(53771045-53771085)
[»] chr2 (50 HSPs)
chr2 (2-342)||(26585162-26585500)
chr2 (90-345)||(14887284-14887540)
chr2 (187-343)||(38853838-38853994)
chr2 (184-343)||(37607185-37607344)
chr2 (184-342)||(18675168-18675325)
chr2 (68-328)||(18676587-18676848)
chr2 (22-139)||(38854225-38854342)
chr2 (2-197)||(18675349-18675545)
chr2 (90-271)||(14886612-14886793)
chr2 (184-345)||(26586176-26586337)
chr2 (218-345)||(12746116-12746243)
chr2 (218-345)||(34582585-34582712)
chr2 (185-271)||(21733653-21733739)
chr2 (91-202)||(26586061-26586173)
chr2 (178-254)||(31443120-31443196)
chr2 (208-339)||(17466733-17466864)
chr2 (184-339)||(34037554-34037709)
chr2 (187-343)||(38854872-38855028)
chr2 (184-255)||(17330120-17330191)
chr2 (184-340)||(7412178-7412334)
chr2 (20-203)||(34582349-34582533)
chr2 (1-75)||(12010561-12010635)
chr2 (185-255)||(31091429-31091499)
chr2 (185-255)||(39016285-39016355)
chr2 (178-255)||(14704156-14704233)
chr2 (252-345)||(15441920-15442013)
chr2 (178-255)||(43380738-43380815)
chr2 (20-95)||(2910428-2910503)
chr2 (18-93)||(12004544-12004619)
chr2 (24-95)||(32765265-32765336)
chr2 (46-101)||(32766027-32766082)
chr2 (185-255)||(39015156-39015226)
chr2 (184-249)||(5914913-5914978)
chr2 (46-95)||(31091274-31091323)
chr2 (178-255)||(32765088-32765165)
chr2 (37-197)||(38855938-38856099)
chr2 (184-268)||(31442489-31442573)
chr2 (91-182)||(37607362-37607454)
chr2 (22-85)||(31090495-31090558)
chr2 (304-339)||(31091528-31091563)
chr2 (304-339)||(39016384-39016419)
chr2 (37-91)||(12011076-12011130)
chr2 (185-255)||(24459356-24459426)
chr2 (168-202)||(38854017-38854051)
chr2 (185-255)||(40000237-40000307)
chr2 (178-235)||(2911382-2911439)
chr2 (178-239)||(21732282-21732343)
chr2 (1-62)||(26586003-26586064)
chr2 (38-74)||(31442900-31442936)
chr2 (292-336)||(33161857-33161901)
[»] chr5 (36 HSPs)
chr5 (186-325)||(32555430-32555568)
chr5 (3-203)||(28864965-28865166)
chr5 (178-348)||(9537100-9537270)
chr5 (20-95)||(28590030-28590105)
chr5 (209-343)||(35538207-35538341)
chr5 (46-101)||(2466520-2466575)
chr5 (20-95)||(4593182-4593257)
chr5 (20-95)||(40612379-40612454)
chr5 (185-255)||(545938-546008)
chr5 (178-255)||(2464820-2464897)
chr5 (184-248)||(13651042-13651106)
chr5 (299-339)||(16611815-16611855)
chr5 (59-202)||(23773302-23773446)
chr5 (184-239)||(31946934-31946989)
chr5 (54-96)||(19186059-19186101)
chr5 (185-255)||(25590581-25590651)
chr5 (185-251)||(32640443-32640509)
chr5 (22-95)||(8074778-8074851)
chr5 (50-95)||(31946878-31946923)
chr5 (184-256)||(19183111-19183183)
chr5 (261-345)||(30970543-30970627)
chr5 (23-95)||(32641466-32641538)
chr5 (20-95)||(2464997-2465072)
chr5 (208-267)||(19186134-19186193)
chr5 (184-254)||(578653-578723)
chr5 (185-255)||(8074601-8074671)
chr5 (299-341)||(9538045-9538087)
chr5 (185-255)||(40611411-40611481)
chr5 (185-255)||(40612561-40612631)
chr5 (304-337)||(14891148-14891181)
chr5 (302-339)||(18004725-18004762)
chr5 (185-254)||(37072730-37072799)
chr5 (43-95)||(19185976-19186028)
chr5 (179-239)||(19271674-19271734)
chr5 (178-282)||(34173404-34173508)
chr5 (304-336)||(40611350-40611382)
[»] chr3 (24 HSPs)
chr3 (178-345)||(36827350-36827517)
chr3 (98-231)||(29188185-29188319)
chr3 (182-255)||(2591776-2591849)
chr3 (190-345)||(40205963-40206118)
chr3 (185-255)||(55389371-55389441)
chr3 (292-337)||(47075340-47075385)
chr3 (217-337)||(3671127-3671247)
chr3 (19-95)||(17701648-17701723)
chr3 (185-255)||(48573136-48573206)
chr3 (185-255)||(48808523-48808593)
chr3 (185-255)||(48809557-48809627)
chr3 (19-85)||(55388399-55388465)
chr3 (304-345)||(27204167-27204208)
chr3 (178-255)||(48574354-48574431)
chr3 (299-339)||(19114620-19114660)
chr3 (304-348)||(53959101-53959145)
chr3 (178-254)||(55388211-55388287)
chr3 (24-95)||(36279272-36279343)
chr3 (292-339)||(47118040-47118087)
chr3 (185-255)||(53959002-53959072)
chr3 (186-255)||(17700670-17700739)
chr3 (178-255)||(36279103-36279180)
chr3 (20-85)||(40206387-40206452)
chr3 (178-255)||(52318212-52318289)
[»] scaffold0767 (3 HSPs)
scaffold0767 (184-254)||(5769-5839)
scaffold0767 (178-235)||(6128-6185)
scaffold0767 (299-337)||(5688-5726)
[»] scaffold0237 (2 HSPs)
scaffold0237 (180-340)||(3032-3193)
scaffold0237 (180-340)||(1771-1931)
[»] chr6 (9 HSPs)
chr6 (180-340)||(29856830-29856991)
chr6 (295-343)||(6752653-6752701)
chr6 (180-340)||(29845566-29845726)
chr6 (218-345)||(5265280-5265406)
chr6 (184-267)||(30748149-30748232)
chr6 (299-337)||(31219156-31219194)
chr6 (23-80)||(19599343-19599400)
chr6 (208-346)||(19600149-19600286)
chr6 (27-95)||(30748315-30748383)
[»] scaffold0009 (2 HSPs)
scaffold0009 (213-345)||(142323-142454)
scaffold0009 (59-198)||(142485-142624)
[»] scaffold0039 (2 HSPs)
scaffold0039 (292-339)||(79672-79719)
scaffold0039 (292-328)||(79171-79207)


Alignment Details
Target: chr1 (Bit Score: 273; Significance: 1e-152; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 44720547 - 44720891
Alignment:
Q  1 tctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaag 100  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  44720547 tctgtaagtgtttactattagggactttagtgacggtaagtgtttattgtcaaggacctaactgatagtaagtatacacagttagagatctaacaacaag 44720646  T
Q  101 tcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctgagaagaacaacactttgttggaacgagtttggagatattgattttcggtt 200  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44720647 tctcccgcaaccatagaacaacttcatcgaagaagatgaccaagttcct--caagaacaacactttgttggaacgagtttggagatattgattttcggtt 44720744  T
Q  201 caacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctc--ataccctttgtcagcataagacttttgtcaggtcatcttttaataa 298  Q
    |||  | ||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  44720745 caagaaccaaagtgacaattttctactttcactttagtcagtgtgacacctcatataccctttgtcagcataagacttttgtcacgtcatcttttaataa 44720844  T
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44720845 aattatttaacgtcagagactaaagtgataatggaagtgcacattca 44720891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 2 - 345
Target Start/End: Original strand, 11060462 - 11060826
Alignment:
Q  2 ctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||||||||| | | |||||| ||||| ||| |||||||||| ||| | |||| ||||||||||||||||| |||| |||| ||||||||| |||||    
T  11060462 ctgtaagtgtttactgtcagggaccttagtaacagtaagtgtttactgttagggacataactgatagtaagtatgcacaatcagtgatctaacagcaagt 11060561  T
Q  102 cttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagata------------- 187  Q
    || || |||||| | ||||||||||| || |||||| ||| ||||| ||  ||||| ||||||||  |||  ||||||||| |||||                 
T  11060562 ctcccgcaaccacataacaacttcattgaggaagattacctagttcttggcgaagagcaacacttcattgcgacgagtttgtagatattgattttcggtt 11060661  T
Q  188 --------ttgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttg 279  Q
            ||||||||| |||||  || ||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||| |||| || |||     
T  11060662 cagggatattgattttctgttcagggatcaaagtgacaattttctactttcactttagtcattgtga-acctcataccccttgtcagaataaaacctttt 11060760  T
Q  280 tcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
     || ||||||  |||| | |||||||||||||| | |||||||||||||| | |||||| ||||||    
T  11060761 ccacgtcatcagttaacagaattatttaacgtcggggactaaagtgataacgaaagtgcccattca 11060826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 345
Target Start/End: Original strand, 50107078 - 50107245
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    ||||| |||||| |||||||||| || || ||||||||| || |  ||||||||| ||||||  ||||||||||||||| | |||||||||||| || ||    
T  50107078 tttggggatattaattttcggttaaaggaccaaagtgaccatgtcctactttcacgttagtccatgtgacacctcatactccttgtcagcataaaacctt 50107177  T
Q  278 tgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    ||||| ||||||  |||| | |||||||||||| ||  |||||||||||||| |||||||||||||||    
T  50107178 tgtcatgtcatcagttaacataattatttaacgccaaggactaaagtgataacggaagtgcacattca 50107245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 11060062 - 11059924
Alignment:
Q  2 ctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||||||||||||| |||||| ||||| ||| |||||||||| ||||| |||| ||||||||| |||||||  |||||||  || |||||| |||||    
T  11060062 ctgtaagtgtttattatcagggaccttagtaacaataagtgtttactgtcagggacataactgataataagtatgtacagtcaatgacctaacatcaagt 11059963  T
Q  102 cttccacaaccatagaacaacttcatcgaagaagatgac 140  Q
    || || |||||| |||||||||||| ||| |||||||||    
T  11059962 ctccctcaaccacagaacaacttcaacgaggaagatgac 11059924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 347
Target Start/End: Complemental strand, 8975377 - 8975238
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattattta 307  Q
    ||||||||| ||||| ||||||||||||||||  ||||||| ||||||| | ||||| |||||| || |||||||  |||||  |||| |||||||||||    
T  8975377 caaagtgaccattttctactttcactttagtccctgtgacatctcatactccttgtcggcataaaacatttgtcatatcatcaattaacaaaattattta 8975278  T
Q  308 acgtcagagactaaagtgataatggaagtgcacattcatg 347  Q
    ||| || ||||||||||||||| | ||||||| |||||||    
T  8975277 acgccaaagactaaagtgataacgaaagtgcatattcatg 8975238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 345
Target Start/End: Complemental strand, 11059858 - 11059704
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||| |||||||||| |  || ||||||||||||||||||| | ||||||||||  ||||||||||||||| | |||||| ||||| ||||||||||     
T  11059858 gatattaattttcggttgagggatcaaagtgacaattttttacctccactttagtccctgtgacacctcatactccttgtcaccataaaacttttgtcac 11059759  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |||       || | ||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  11059758 gtc-------aacataattatttaacgtcagagattaaagtgatcatggaagtacacattca 11059704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 33342600 - 33342494
Alignment:
Q  242 tgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcaca 341  Q
    ||||||||||||||| | |||||||||||| ||||||||||  |||||  |||| | ||||||||||||||||||||||||||||||| | | |||||||    
T  33342600 tgtgacacctcatactccttgtcagcataaaacttttgtcacatcatcacttaacataattatttaacgtcagagactaaagtgataacgtatgtgcaca 33342501  T
Q  342 ttcatga 348  Q
    |||||||    
T  33342500 ttcatga 33342494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 342
Target Start/End: Complemental strand, 29766165 - 29766007
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    ||||||||||||  |||||  || ||||||||||||||| || |||||||||||| | | |||||||||||||  ||||||||||||| || ||||| |     
T  29766165 gatattgattttttgttcagggaccaaagtgacaattttctattttcactttagtaactatgacacctcatactatttgtcagcataaaacatttgttac 29766066  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacat 342  Q
     |||||  |||| |||||||||||||   | |||||||||||||||  |||||||||||    
T  29766065 atcatcaattaacaaaattatttaacactatagactaaagtgataacagaagtgcacat 29766007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 50106864 - 50107063
Alignment:
Q  1 tctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaag 100  Q
    |||||||||||||| | | | |||| ||||||| | | ||||| || | ||| |||||||| ||||| ||||||| |||| |||| || |||||||||||    
T  50106864 tctgtaagtgtttactgtcatggaccttagtgatagtgagtgtataatatcagggacttaattgatactaagtatgcacaatcag-gacctaacaacaag 50106962  T
Q  101 tcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcggt 199  Q
    ||| ||  ||||| | ||||||||||| || |||||||| | ||||  ||| |||||  |||| || ||||| |||||||||| ||||||||||||||||    
T  50106963 tctcccttaaccacaaaacaacttcattgaggaagatgatccagttattgacgaagagtaacaattcgttgggacgagtttggggatattgattttcggt 50107062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 346
Target Start/End: Complemental strand, 44719592 - 44719430
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    ||||||||||||| |||||  || ||||||||||||||| |||||||| ||||||   |||||||| |  ||||| |||| ||||||| || |||| ||     
T  44719592 gatattgattttcagttcagggagcaaagtgacaattttctactttcattttagttcatgtgacacattgtaccccttgttagcataaaacctttgccac 44719493  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattcat 346  Q
      ||||  | || |||||||||||| | ||||||||||| |||||| ||||||||| ||||||    
T  44719492 aacatcaatgaacaaaattatttaaagacagagactaaaatgataacggaagtgcatattcat 44719430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 5782548 - 5782501
Alignment:
Q  292 ttaataaaattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  5782548 ttaataaaattatttaacgtcagagactaaagtgataagggaagtgca 5782501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 29766304 - 29766217
Alignment:
Q  40 gtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttcat 127  Q
    |||||||||||||||||| ||||||| |||||||||||||||| | ||| |||||| |||||||  |||||| |  ||||||||||||    
T  29766304 gtgtttattgtcaaggacctaactgacagtaagtatacacagttacagacctaacatcaagtctctcacaactacggaacaacttcat 29766217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 1407870 - 1407802
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctc 252  Q
    |||||| ||||||||||||| || |||||||| |||||| ||||||||||||||||  |||||||||||    
T  1407870 gatattaattttcggttcaaggaccaaagtgataattttctactttcactttagtccatgtgacacctc 1407802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 1001393 - 1001326
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacct 251  Q
    |||||||||||||||||||| || |||||| || ||||| ||||||||||||||||  ||||||||||    
T  1001393 gatattgattttcggttcaaggatcaaagtaactattttctactttcactttagtccatgtgacacct 1001326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 22857484 - 22857615
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattattta 307  Q
    ||||||||| | ||| ||||||||||||||||  ||||||||||||||     |||||  |||| |||| |||||  |||||  |||| | |||||||||    
T  22857484 caaagtgactagtttctactttcactttagtccatgtgacacctcatatgtcatgtcattataaaacttgtgtcacatcatcacttaacataattattta 22857583  T
Q  308 acgtcagagactaaagtgataatggaagtgca 339  Q
    ||||||  |||||||||||||| |||||||||    
T  22857584 acgtcatggactaaagtgataacggaagtgca 22857615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 6612658 - 6612506
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    ||||| |||||||||||| ||||||| ||  |||||||  ||||| |||||| | |||||||  ||||||||||||||  | ||||||||||            
T  6612658 tttggggatattgatttttggttcaaggacaaaagtgatcattttctactttgaatttagtccctgtgacacctcatattccttgtcagcat-------- 6612567  T
Q  278 tgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
     ||||  | |||  |||| |||||||||||||||||| || |||||||||||||||||||||    
T  6612566 -gtcacataatcacttaacaaaattatttaacgtcagggattaaagtgataatggaagtgca 6612506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 337
Target Start/End: Complemental strand, 3117897 - 3117738
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    ||||| |||||| ||||| ||||||| ||  ||| |||  ||||| ||||||||||||||||| ||||||||||||||     || || | ||| || |     
T  3117897 tttggggatattaatttttggttcaaggactaaaatgatcattttctactttcactttagtcattgtgacacctcatatgtcatgccatcgtaaaacatg 3117798  T
Q  278 tgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtg 337  Q
    |||||  |||||  |||| ||||||||||||| |||||  |||||||||||| |||||||    
T  3117797 tgtcacatcatcaattaacaaaattatttaacttcagacgctaaagtgataacggaagtg 3117738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 7945321 - 7945376
Alignment:
Q  46 attgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||| |||| ||||||||||||||||| |||||||||||| ||||||| ||||    
T  7945321 attgtcagggacctaactgatagtaagtatgcacagtcagagacctaacaataagt 7945376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 22856895 - 22856767
Alignment:
Q  209 aaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaa 308  Q
    |||||||  ||||| ||||||||||||||||  ||||||||||||||  |  ||||| | ||| | || |||||  | |||  |||| | ||||||||||    
T  22856895 aaagtgatcattttctactttcactttagtc--tgtgacacctcatatgccatgtcatcgtaaaatttgtgtcacataatcacttaacataattatttaa 22856798  T
Q  309 cgtcagagactaaagtgataatggaagtgca 339  Q
    |||| |||||||||||||||| |||||||||    
T  22856797 cgtcggagactaaagtgataacggaagtgca 22856767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 25038123 - 25038052
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    |||||||||||| ||||||  || |||||||| |||||| |||||||||||||||   ||||||||||||||    
T  25038123 gatattgatttttggttcagggaccaaagtgataattttctactttcactttagttcatgtgacacctcata 25038052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 25043335 - 25043264
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    |||||||||||| ||||||  || |||||||| |||||| |||||||||||||||   ||||||||||||||    
T  25043335 gatattgatttttggttcagggaccaaagtgataattttctactttcactttagttcatgtgacacctcata 25043264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 8975598 - 8975520
Alignment:
Q  5 taagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtc 83  Q
    |||||||||| | | ||||||  |||| ||| ||||||||||| |||| |||| ||||||||||||||||||| |||||    
T  8975598 taagtgtttactgtcagggaccatagttacagtaagtgtttatagtcagggacctaactgatagtaagtatacgcagtc 8975520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 7944383 - 7944306
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||| ||  || |||||||| |||||| |||||||||||| |||  ||||||||||||||    
T  7944383 tttggggatattgatttttggtccagggaccaaagtgataattttctactttcactttggtctatgtgacacctcata 7944306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 9339874 - 9339797
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||| ||||||    
T  9339874 tttggggatattgatttttggttcagagaccaaagtgaccattttctactttcactttggtccctgtgacatctcata 9339797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 26518337 - 26518261
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    ||||||||||||| |||||||||||  || ||||||||| ||||| ||| ||||||||| |   |||||||||||||    
T  26518337 tttggagatattggttttcggttcagagaccaaagtgaccattttctaccttcactttaatttatgtgacacctcat 26518261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 269
Target Start/End: Original strand, 6613862 - 6613953
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcat 269  Q
    ||||| |||||||||||| ||||||  ||||||||| | |||||  ||||||||||||||||  ||||| ||| |||||   ||||||||||    
T  6613862 tttggggatattgatttttggttcagggaacaaagtaataatttcctactttcactttagtccctgtgaaaccccatactgcttgtcagcat 6613953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 7944560 - 7944489
Alignment:
Q  22 ggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaa 93  Q
    |||||||||||| |||   |||||| ||||| |||| ||||||||||||||||| |||| ||||||| ||||    
T  7944560 ggactttagtgaaatttcatgtttactgtcagggacctaactgatagtaagtatgcacattcagagacctaa 7944489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 5782621 - 5782551
Alignment:
Q  179 ttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacac 249  Q
    |||| |||||||||||| |||| |  ||  ||||||||||||||||| |||||||||||||  ||||||||    
T  5782621 ttggggatattgatttttggtttagggattaaagtgacaattttttagtttcactttagtccatgtgacac 5782551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 9340927 - 9340997
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||| ||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  9340927 atattgaattttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 9340997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 11830131 - 11830061
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    |||||||||||| ||||| | || |||| |||| ||||| ||||||||||||| ||  |||||||||||||    
T  11830131 gatattgatttttggttctaggatcaaaatgaccattttctactttcactttaatccatgtgacacctcat 11830061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 32665664 - 32665742
Alignment:
Q  178 tttggagatattgattttcg-gttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| | |||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  32665664 tttggggatattgatttttgtgttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcata 32665742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 534429 - 534510
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtca 265  Q
    |||||||||||||| |||   || ||||||||  ||||||||||||||||||||||   ||||||| |||||| | ||||||    
T  534429 gatattgattttcgattcgtggatcaaagtgatcattttttactttcactttagtccccgtgacacgtcatactccttgtca 534510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 1407774 - 1407737
Alignment:
Q  292 ttaataaaattatttaacgtcagagactaaagtgataa 329  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  1407774 ttaacaaaattatttaacgtcagggactaaagtgataa 1407737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 9340787 - 9340836
Alignment:
Q  46 attgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    ||||||| |||| ||||||||||||||||| ||||||||| || ||||||    
T  9340787 attgtcagggacctaactgatagtaagtatgcacagtcagggacctaaca 9340836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 34088200 - 34088245
Alignment:
Q  41 tgtttattgtcaaggacttaactgatagtaagtatacacagtcaga 86  Q
    |||||||| ||| |||| ||||||||||||||||| ||||||||||    
T  34088200 tgtttattatcatggacctaactgatagtaagtatgcacagtcaga 34088245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 345
Target Start/End: Original strand, 25621473 - 25621763
Alignment:
Q  59 taactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaa 157  Q
    ||||||||||||||||| |||| |||   | |||||||||||||| || |||||| ||||||||||||| || |||||||||| ||||| ||| |||||     
T  25621473 taactgatagtaagtatgcacaatcaagaacctaacaacaagtctcccgcaaccacagaacaacttcattgaggaagatgacccagttcttgacgaagag 25621572  T
Q  158 caacactttgttggaacgagtttggagatattgattttcggttca---acgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    |||||||| ||||  |||||||||  ||||||| |||||||||||   || ||  ||||||| ||||| ||||||||||||||||  ||| |||| ||||    
T  25621573 caacacttcgttgagacgagtttgaggatattggttttcggttcaggaactaattaagtgaccattttctactttcactttagtccttgttacacttcat 25621672  T
Q  255 accctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |||| |||| ||||||| |  |||| ||  |||||  |||| |||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  25621673 accccttgtgagcataaaatctttgccaaatcatcagttaacaaaattatttaacgtcagtgactaaagtgataacagaagtgcacattca 25621763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 8870441 - 8870246
Alignment:
Q  1 tctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaag 100  Q
    |||||||||||||| ||| ||| |||| ||||||| ||||| |||||||| | |||| ||||||| ||||| ||||||||||||| || |||| || |||    
T  8870441 tctgtaagtgtttactatcaggaacttaagtgacaataagt-tttattgttagggacctaactgacagtaactatacacagtcagggacctaataataag 8870343  T
Q  101 tcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttc 196  Q
    |||    |||||| ||||||||||||| || | |||| ||| ||||| ||| |||||||||||||||||||| |||||||||  |||||||||||||    
T  8870342 tctcattcaaccaaagaacaacttcattgaggtagataaccgagttcttgacgaagaacaacactttgttgggacgagtttgaggatattgattttc 8870246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 345
Target Start/End: Original strand, 24288747 - 24288908
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||| ||||||||||||| || |||| | || ||||| |||||| | |||||||  ||| |||| |||||| | |||||||||||| || |||||||     
T  24288747 gatatttattttcggttcaaggatcaaaattaccattttctacttttattttagtccatgtcacacatcatactccttgtcagcataaaacctttgtcac 24288846  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
     |||||  |||| | |||||| ||||| |||||| |||||||||||||||||||||||||||    
T  24288847 atcatcagttaacagaattatataacgccagagaataaagtgataatggaagtgcacattca 24288908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 345
Target Start/End: Complemental strand, 27067996 - 27067863
Alignment:
Q  212 gtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgt 311  Q
    ||||| ||||| ||||||||||||||||  ||||||||  ||||| ||||||||||||||  | |||||||  ||| |  |||  | |||||||||| ||    
T  27067996 gtgaccattttctactttcactttagtctctgtgacacaccatactctttgtcagcataaaccatttgtcacatcacccgttagcataattatttaatgt 27067897  T
Q  312 cagagactaaagtgataatggaagtgcacattca 345  Q
    |||||||||||||||||||| |||||||||||||    
T  27067896 cagagactaaagtgataatgaaagtgcacattca 27067863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 345
Target Start/End: Original strand, 27210317 - 27210450
Alignment:
Q  212 gtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgt 311  Q
    ||||| ||||| ||||||||||||||||  ||||||||  ||||| ||||||||||||||  | |||||||  ||| |  |||  | |||||||||| ||    
T  27210317 gtgaccattttctactttcactttagtctctgtgacacaccatactctttgtcagcataaaccatttgtcacatcacccgttagcataattatttaatgt 27210416  T
Q  312 cagagactaaagtgataatggaagtgcacattca 345  Q
    |||||||||||||||||||| |||||||||||||    
T  27210417 cagagactaaagtgataatgaaagtgcacattca 27210450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 192
Target Start/End: Original strand, 8879204 - 8879393
Alignment:
Q  2 ctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||||||||| ||| |||||||| ||||||| || || |||| |||||  ||| ||| ||| |||||||||||||||||||  | |||| || ||||    
T  8879204 ctgtaagtgtttactatcagggacttaagtgacaatatgt-tttactgtcagagacctaaatgacagtaagtatacacagtcaggaacctaataataagt 8879302  T
Q  102 cttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctgagaa-gaacaacactttgttggaacgagtttggagatattgat 192  Q
    || |  |||||| ||||||||||||| ||   |||||||| || || ||| || ||||||||||||||||| |||||||||| |||||||||    
T  8879303 ctcctccaaccaaagaacaacttcattgagctagatgaccgagctcttgacaaagaacaacactttgttgggacgagtttgg-gatattgat 8879393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 24287888 - 24287787
Alignment:
Q  2 ctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||||||||| | | ||||| ||||||||||||||||||||| ||||| ||||  |||||||||||||||| || |||||  || ||||||||||||    
T  24287888 ctgtaagtgtttactgtcagggattttagtgacattaagtgtttactgtcagggaccaaactgatagtaagtatgcatagtcaaggacctaacaacaagt 24287789  T
Q  102 ct 103  Q
    ||    
T  24287788 ct 24287787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 30924736 - 30924813
Alignment:
Q  19 tagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaa 96  Q
    ||||||||||||||| |||  ||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||    
T  30924736 tagggactttagtgaaatttcgtgtttattgtcagggacctaactgatagtaagtatgcacagtcagagacctaacaa 30924813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 345
Target Start/End: Complemental strand, 30917956 - 30917794
Alignment:
Q  182 gagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtc 281  Q
    |||||||| |||||||||||   ||  || ||||||||||| | ||||||||||||||  ||||||||||||||| |||||||| ||||| |  |||| |    
T  30917956 gagatattaattttcggttctgggacaaacgtgacaattttcttctttcactttagtccttgtgacacctcatactctttgtcaacataaaatctttg-c 30917858  T
Q  282 aggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |  |||||  |||  | ||||||||||||||   || |||||||||||||||||||||||||||    
T  30917857 acatcatcagttagcataattatttaacgtcgaggattaaagtgataatggaagtgcacattca 30917794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 12223574 - 12223651
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||| || |||||||||||||||||||||||||||||||   ||||||| ||||||    
T  12223574 tttggggatattgatttttggttcaaggatcaaagtgacaattttttactttcactttagttcctgtgacaactcata 12223651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 348
Target Start/End: Complemental strand, 33060951 - 33060888
Alignment:
Q  285 tcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattcatga 348  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  33060951 tcatcatttaacagaattatttaacgtcagagactaaagtgataacggaagtgtacattcatga 33060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 385061 - 384991
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    |||||||||||||| ||||  || ||||||||||||||| |||||||||||||||||  ||||||||||||    
T  385061 gatattgattttcgattcatagatcaaagtgacaattttctactttcactttagtcaacgtgacacctcat 384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 348
Target Start/End: Complemental strand, 24287722 - 24287558
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||| ||||| ||||||  ||  |||| ||| ||||| ||||||||||||||||  ||||||||||||||| | ||||| ||||||   ||||| |      
T  24287722 gatattcatttttggttcagggactaaagcgaccattttctactttcactttagtccctgtgacacctcatactccttgtcggcataatttttttgcctc 24287623  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattcatga 348  Q
     | |||  |||| | |||||||||||||||  ||||||||||||||   ||||||||||||||||    
T  24287622 attatcaattaacataattatttaacgtcaaggactaaagtgataacttaagtgcacattcatga 24287558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 339
Target Start/End: Original strand, 8048665 - 8048820
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||| ||||||||||||  || ||||||||| ||||| ||||||||||||||||  |||||||| |||||   | ||||| | ||  || | || ||     
T  8048665 gatattaattttcggttcagggaccaaagtgaccattttctactttcactttagtccatgtgacacatcatatgttatgtcatcgtataacatgtgacac 8048764  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
     |||||  |||||| ||||||||||||| | ||| ||||||||||| |||||||||    
T  8048765 atcatcacttaatagaattatttaacgttaaagattaaagtgataacggaagtgca 8048820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 43461618 - 43461689
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    |||||||||||| ||||||  || ||||||||| |||||||||||||||||||||   ||||||||||||||    
T  43461618 gatattgatttttggttcagggatcaaagtgaccattttttactttcactttagttcatgtgacacctcata 43461689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 345
Target Start/End: Original strand, 8879464 - 8879585
Alignment:
Q  224 tactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaag 323  Q
    ||||||||||||| ||  | ||||||||||||  | |||||| ||||| || |||| ||  ||||   |||| |||||||||||||||||| ||||||||    
T  8879464 tactttcactttactctatatgacacctcatattccttgtcatcataaaacctttgccatctcattagttaacaaaattatttaacgtcagggactaaag 8879563  T
Q  324 tgataatggaagtgcacattca 345  Q
    ||||||  ||| ||||||||||    
T  8879564 tgataacagaaatgcacattca 8879585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 30924904 - 30924981
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||  || ||||||||| ||||| ||||||||||||  ||| ||||||||||||||    
T  30924904 tttggggatattgatttttggttcatagatcaaagtgaccattttctactttcactttgatcactgtgacacctcata 30924981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 33607389 - 33607466
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||| ||| || ||||||||| | ||||||||||||||||||||  | ||||||||||||    
T  33607389 tttggggatattgatttttggtccaaggaccaaagtgaccaatttttactttcactttagtccatttgacacctcata 33607466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 44529691 - 44529626
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcag 85  Q
    |||||||||||||| |||  ||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  44529691 agggactttagtgaaatttcgtgtttactgtcatggacttaaatgatagtaagtatgcacagtcag 44529626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 43457666 - 43457619
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  43457666 caaagtgaccattttttactttcactttagtctctgtgacacctcata 43457619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 7258496 - 7258426
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  7258496 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 7258426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 10898975 - 10899045
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||| || ||||||||| ||||| ||||||| |||| |||  ||||||||||||||    
T  10898975 atattgatttttggttcaaggaccaaagtgaccattttctactttctctttggtccctgtgacacctcata 10899045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 329
Target Start/End: Complemental strand, 34707736 - 34707698
Alignment:
Q  291 tttaataaaattatttaacgtcagagactaaagtgataa 329  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  34707736 tttaacaaaattatttaacgtcagagactaaagtgataa 34707698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 35728074 - 35728024
Alignment:
Q  46 attgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaa 96  Q
    ||||||| |||| ||||||||||||||||| ||||||||| ||||||||||    
T  35728074 attgtcagggacctaactgatagtaagtatgcacagtcagtgatctaacaa 35728024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 48788574 - 48788644
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  48788574 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcata 48788644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 22621345 - 22621208
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattattta 307  Q
    ||||||||  ||||| ||||||||||||||||  |||||||| |||| | | ||||||||| || || |||||||  |||||  |||| | || | ||||    
T  22621345 caaagtgatcattttctactttcactttagtccttgtgacacatcatgcgccttgtcagcaaaaaacatttgtcaactcatcagttaacagaagttttta 22621246  T
Q  308 acgtcagagactaaagtgataatggaagtgcacattca 345  Q
    ||| || |||||| | ||||||  ||||||||||||||    
T  22621245 acgacatagactagactgataacagaagtgcacattca 22621208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 44334345 - 44334422
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||| ||||||    
T  44334345 tttggggatattgatttttggttcatggaccaaagtgactattttctactttcactttggtccatgtgacatctcata 44334422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 9365199 - 9365243
Alignment:
Q  210 aagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||    
T  9365199 aagtgacaattttctactttcactttaatctgtgtgacacctcat 9365243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 46286744 - 46286673
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcatac 256  Q
    ||||||||||| ||||||| || ||||||||| ||||| |||||||| ||| |||| ||| |||| ||||||    
T  46286744 atattgatttttggttcaaggatcaaagtgactattttctactttcattttggtcaatgtaacacatcatac 46286673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 48788673 - 48788708
Alignment:
Q  304 tttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||||||||||||||||| |||||||||    
T  48788673 tttaacgtcagagactaaagtgataacggaagtgca 48788708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 330072 - 329998
Alignment:
Q  108 caaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttg 181  Q
    |||||| | ||||||||||| || |||||||||| ||||| ||| ||||| |||||||| ||||| |||||||||    
T  330072 caaccacataacaacttcattgaggaagatgacccagttcttgacgaagagcaacacttcgttgggacgagtttg 329998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 8375039 - 8375001
Alignment:
Q  301 ttatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  8375039 ttatttaacgtcaaagactaaagtgataacggaagtgca 8375001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 8870845 - 8870883
Alignment:
Q  158 caacactttgttggaacgagtttggagatattgattttc 196  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  8870845 caacactttgttgggacgagtttggggatattgattttc 8870883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 35727919 - 35727849
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| |||| || || ||||||||| ||||| |||| ||||||| |||  ||||||||||||||    
T  35727919 atattgatttttggttaaaggatcaaagtgaccattttctactatcactttggtccctgtgacacctcata 35727849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 43461730 - 43461764
Alignment:
Q  305 ttaacgtcagagactaaagtgataatggaagtgca 339  Q
    ||||||||||||||||||||||||| |||||||||    
T  43461730 ttaacgtcagagactaaagtgataacggaagtgca 43461764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 44333358 - 44333288
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| ||||||||| || |||  ||||||||||||||    
T  44333358 atattgatttttggttcagggaccaaagtgaccattttctactttcacgttggtccctgtgacacctcata 44333288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 48646269 - 48646204
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacct 251  Q
    ||||| ||||| ||||||| || ||||||||| |||||||||||||||||| |||  ||||||||||    
T  48646269 atattaatttttggttcaagga-caaagtgaccattttttactttcactttggtctctgtgacacct 48646204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 48647345 - 48647415
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  ||  |||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  48647345 atattgatttttggttcagggacgaaagtgaccattttctactttcactttggtccttgtgacacctcata 48647415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 7259433 - 7259478
Alignment:
Q  40 gtgtttattgtcaaggacttaactgatagtaagtatacacagtcag 85  Q
    ||||||| ||||| |||| ||||||||||||||||| |||||||||    
T  7259433 gtgtttactgtcagggacctaactgatagtaagtatgcacagtcag 7259478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 24844695 - 24844654
Alignment:
Q  304 tttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    ||||||||  ||||||||| ||||||||||||||||||||||    
T  24844695 tttaacgtttgagactaaactgataatggaagtgcacattca 24844654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 24935018 - 24934965
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagt 238  Q
    |||||||||||||||| |  || ||||||||| ||||| |||||||||||||||    
T  24935018 atattgattttcggtttagggatcaaagtgaccattttctactttcactttagt 24934965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 34710308 - 34710349
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacac 249  Q
    |||||| |||||||||||||||||||||||||  ||||||||    
T  34710308 caaagtaacaattttttactttcactttagtctctgtgacac 34710349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 42477756 - 42477707
Alignment:
Q  46 attgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    ||||||| |||| ||||||||||||||||| ||||||||| || ||||||    
T  42477756 attgtcagggacctaactgatagtaagtatgcacagtcagggacctaaca 42477707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 44529162 - 44529125
Alignment:
Q  292 ttaataaaattatttaacgtcagagactaaagtgataa 329  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  44529162 ttaacaaaattatttaacgtcagggactaaagtgataa 44529125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 45584251 - 45584292
Alignment:
Q  54 ggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||||||||||||||| ||||||||| || ||||||    
T  45584251 ggacttaactgatagtaagtatgcacagtcagggacctaaca 45584292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 48646425 - 48646376
Alignment:
Q  46 attgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    ||||||| |||| ||||||||||||||||| ||||||||| || ||||||    
T  48646425 attgtcagggacctaactgatagtaagtatgcacagtcagggacctaaca 48646376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 48787684 - 48787611
Alignment:
Q  22 ggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||||| |||  ||||||| ||||| | || ||||||||||||| ||| ||||||||| || ||||||    
T  48787684 ggactttagtgaaattttgtgtttactgtcaggaacctaactgatagtaaatatgcacagtcagtgacctaaca 48787611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 2677158 - 2677094
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgaca 248  Q
    ||||||||||||  |||||  |||||||||||  ||||| ||||||||||||||||  |||||||    
T  2677158 gatattgatttttagttcagggaacaaagtgatcattttctactttcactttagtccatgtgaca 2677094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 6680529 - 6680569
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    ||||||||||| ||| |||||||||||||||| ||||||||    
T  6680529 aattatttaacatcaaagactaaagtgataatagaagtgca 6680569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 13578317 - 13578356
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  13578317 aattatttaacgtcag-gactaaagtgataacggaagtgca 13578356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 24935617 - 24935657
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgaca 248  Q
    |||||||||| |||||||||||||||||||||  |||||||    
T  24935617 caaagtgacatttttttactttcactttagtccttgtgaca 24935657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 34888847 - 34888959
Alignment:
Q  227 tttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtga 326  Q
    ||||||| |||||  ||||||||||||||  || | ||| | ||| || | ||||| ||||||  |||| | ||||||| |||||||  |||||||||||    
T  34888847 tttcactgtagtccatgtgacacctcatatgctatatcatcgtaaaacctatgtcacgtcatcacttaacataattattaaacgtcaaggactaaagtga 34888946  T
Q  327 taatggaagtgca 339  Q
    ||| |||||||||    
T  34888947 taacggaagtgca 34888959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 44334181 - 44334241
Alignment:
Q  22 ggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagt 82  Q
    |||||||||||| |||  |||||||   |||||||| ||||||||||||||||| ||||||    
T  44334181 ggactttagtgaaatttcgtgtttacattcaaggacctaactgatagtaagtatgcacagt 44334241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 48647163 - 48647223
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacaca 80  Q
    |||||||||||||| |||  ||||||| ||||| |||| ||||| ||||||||||| ||||    
T  48647163 agggactttagtgaaatttcgtgtttactgtcagggacctaactaatagtaagtatgcaca 48647223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 5e-47; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 329
Target Start/End: Original strand, 31074990 - 31075316
Alignment:
Q  3 tgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtc 102  Q
    |||||||||||||| | |||||  ||||||||| |||||||||| | ||| |||| ||||||||||||||||| || | ||||| |||||| ||||||||    
T  31074990 tgtaagtgtttattgtcagggatcttagtgacagtaagtgtttactatcagggacctaactgatagtaagtatgcataatcagatatctaaaaacaagtc 31075089  T
Q  103 ttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcggttc 201  Q
    | || | |||  ||| || || ||| || ||| ||| || ||||| ||| ||||| ||| |||| ||||| |||||||| | ||||||||||||| ||||    
T  31075090 tcccgccaccgcagagcagctccattgaggaacatggcccagttcttgacgaagatcaatacttcgttgggacgagttttgggatattgattttcagttc 31075189  T
Q  202 aacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaat 301  Q
    |  || ||||||||| | ||| |||||||| |||||||  ||||||||||| ||| | |||||| ||||| || ||||||| ||||||  |||||| |||    
T  31075190 agggaccaaagtgaccactttctactttca-tttagtccttgtgacacctcgtactccttgtcaccataaaacctttgtcacgtcatcagttaatataat 31075288  T
Q  302 tatttaacgtcagagactaaagtgataa 329  Q
    ||||||||||||| ||||||||||||||    
T  31075289 tatttaacgtcagtgactaaagtgataa 31075316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 345
Target Start/End: Complemental strand, 9625587 - 9625271
Alignment:
Q  27 ttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttca 126  Q
    |||||||||||||||||||||| ||| |||| ||||||| |||||| |||||||||||| |||||   |||||||||||  |||||||||||||||||||    
T  9625587 ttagtgacattaagtgtttattatcagggacctaactgacagtaagcatacacagtcagggatct---aacaagtcttctgcaaccatagaacaacttca 9625491  T
Q  127 tcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcggttcaacgaac-aaagtgacaatttttt 224  Q
    | || ||||||| || | |||  || ||||| ||||||||  |||| |||||||||  |||||||||||||| ||| |||||| |||||||| ||||| |    
T  9625490 ttgaggaagatggcccaattctagatgaagagcaacacttcattgggacgagtttgaggatattgattttcgattc-acgaactaaagtgaccattttct 9625392  T
Q  225 actttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaagt 324  Q
    |||||||||||| ||  |  || |   ||||| | |||||||||||| || |||||||  | |||  |||| | |||||||||||   | ||||||||||    
T  9625391 actttcactttaatctttacgataatccatactccttgtcagcataaaacatttgtcacctaatcagttaacataattatttaacactaaagactaaagt 9625292  T
Q  325 gataatggaagtgcacattca 345  Q
    ||||||||||||||| |||||    
T  9625291 gataatggaagtgcatattca 9625271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 31074457 - 31074255
Alignment:
Q  1 tctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaag 100  Q
    |||||||||||||| | | | |||| ||||||||| ||||||  || |||||||||  ||||||||||||||||| || |||||| || |||||| |||     
T  31074457 tctgtaagtgtttactctcatggaccttagtgacagtaagtgcatactgtcaaggatctaactgatagtaagtatgcatagtcagggacctaacatcaaa 31074358  T
Q  101 tcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcggt 199  Q
    |||  ||||||||||||||||||||||||| |||||||||| ||||| ||| ||||| ||||| || ||||| |||||||||| ||||||||||||||||    
T  31074357 tctcacacaaccatagaacaacttcatcgaggaagatgacctagttcttgacgaagagcaacatttcgttgggacgagtttggggatattgattttcggt 31074258  T
Q  200 tca 202  Q
    |||    
T  31074257 tca 31074255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 345
Target Start/End: Complemental strand, 28525000 - 28524839
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||||||||||||||||  || |||| |||||||||||||||||||||||||||  | |||||| |||||| |||||||| ||||| |  |||| ||     
T  28525000 gatattgattttcggttcacggaccaaaatgacaattttttactttcactttagtccatctgacacttcatactctttgtcaacataaaatctttgccac 28524901  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
     |||||  |||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  28524900 atcatcagttaacaaaattatttaacgtcagagactaaaatgataacggaagtgcacattca 28524839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 28063086 - 28062891
Alignment:
Q  4 gtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtct 103  Q
    ||||||||||| | | |||||| ||||||||| | |||||||| ||| |||||| |||||||| |||||||| |||||| || || |||| | |||||||    
T  28063086 gtaagtgtttactgtcagggaccttagtgacactgagtgtttactgttaaggacctaactgattgtaagtatgcacagttagggacctaaaagcaagtct 28062987  T
Q  104 tccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcgg 198  Q
     || |||||| | ||||||||||| || |||||||||  ||||| ||| |||||  ||||||| |||||||||||||||| |||||||||||||||    
T  28062986 cccgcaaccacataacaacttcattgaggaagatgacttagttcttgacgaagaggaacacttcgttggaacgagtttggggatattgattttcgg 28062891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 345
Target Start/End: Complemental strand, 24199278 - 24199015
Alignment:
Q  80 agtcagagatctaacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagt 178  Q
    ||||||||  |||||||||| ||| || |||||| | | ||||||||| || |||||||||| ||||| ||| ||||| |||||||| |||||  || ||    
T  24199278 agtcagaggcctaacaacaattctcccgcaaccacataccaacttcattgaggaagatgacccagttcttgacgaagagcaacacttcgttggggcgggt 24199179  T
Q  179 ttggagatattgatttt-cggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    |||| |||||||||||| || ||||  || |||| |||  |||||||||||||||||||||   ||||||||||||||||| |||||||||||| || ||    
T  24199178 ttggggatattgatttttcgattcagggaccaaaatgatcattttttactttcactttagtatctgtgacacctcataccccttgtcagcataaaacatt 24199079  T
Q  278 tgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    ||  | ||||||    || | ||||||| ||||  | ||||||||||||||| |||||||||||||||    
T  24199078 tgctacgtcatc----aacataattattcaacgaaaaagactaaagtgataacggaagtgcacattca 24199015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 263
Target Start/End: Complemental strand, 36033130 - 36032869
Alignment:
Q  3 tgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtc 102  Q
    |||||||||||| | |||||||| ||||||| |   |||||||| |||||  ||||||||||||||||||| | |||||||||  | |||||||||||||    
T  36033130 tgtaagtgtttactgttagggaccttagtgataacgagtgtttactgtcagagacttaactgatagtaagtgtgcacagtcaggaacctaacaacaagtc 36033031  T
Q  103 ttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcggttc 201  Q
    |  |  ||||| | ||||  ||||||||| ||||||||||||||| ||| ||||| ||||| || ||||| || |||||||  ||||  ||||||  |||    
T  36033030 tctcgtaaccagataacagtttcatcgaataagatgaccaagttcttgacgaagagcaacatttcgttgggacaagtttgggaatatcaattttctcttc 36032931  T
Q  202 aacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgt 263  Q
    |  || | || |||||||||| |||||||||||| |||  ||||||||||||||||| ||||    
T  36032930 agggacctaattgacaattttctactttcactttcgtccctgtgacacctcataccccttgt 36032869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 28005783 - 28005588
Alignment:
Q  4 gtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtct 103  Q
    ||||||||||| | | |||||| ||||||||| | |||||||| |||  ||||| |||||||| |||||||| |||||| || || |||| | |||||||    
T  28005783 gtaagtgtttactgtcagggaccttagtgacactgagtgtttactgttgaggacctaactgattgtaagtatgcacagttagggacctaaaagcaagtct 28005684  T
Q  104 tccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcgg 198  Q
     || |||||| | ||||||||||| || |||||||||  ||||| ||| |||||  ||||||| |||||||||||||||| |||||||||||||||    
T  28005683 cccgcaaccacataacaacttcattgaggaagatgacttagttcttgacgaagaggaacacttcgttggaacgagtttggggatattgattttcgg 28005588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 12637438 - 12637633
Alignment:
Q  2 ctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||||||||| | | ||| || ||||||||| |||||||||| ||||| | || |||||||||||||||||  | ||| || || | ||| ||||||    
T  12637438 ctgtaagtgtttactgtcaggaaccttagtgacagtaagtgtttactgtcaggaacctaactgatagtaagtatgtatagttagggaccgaacgacaagt 12637537  T
Q  102 cttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttc 196  Q
    || | ||||||| | |||| |||||| || ||| |||||||||||  ||| ||||| |||||||| |||||||||||||| | |||||||||||||    
T  12637538 ctcctacaaccacataacatcttcattgaggaacatgaccaagtttttgacgaagagcaacacttcgttggaacgagtttagggatattgattttc 12637633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 39138545 - 39138643
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtca 282  Q
    |||||||||||||||| |||  | ||||||||| ||||| ||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||    
T  39138545 gatattgattttcggtacaagaatcaaagtgaccattttctactttcactttagtccttgtgacacctcatacactttgtcagcataaaacttttgtca 39138643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 28525162 - 28525018
Alignment:
Q  59 taactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcct-gagaagaa 157  Q
    ||||||||||||||||| |||||| ||||| |||||||||| |||||| || ||| |  |||||||||| || |||||||||| | ||  |  ||||||     
T  28525162 taactgatagtaagtatgcacagttagagacctaacaacaaatcttccgcagccacaagacaacttcattgaggaagatgacccaattattaaagaagag 28525063  T
Q  158 caacactttgttggaacgagtttggagatattgattttcggttca 202  Q
    |||||||| ||||| |||||||||| ||||||||||||| |||||    
T  28525062 caacacttcgttgggacgagtttggggatattgattttcagttca 28525018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 28526269 - 28526496
Alignment:
Q  22 ggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaa--gtcttccacaaccatagaac 119  Q
    |||| ||||||| | |||||||||| ||||| |||| ||||||||||||||||| ||||||||| || |||||| |||  |||| || |||||| | |||    
T  28526269 ggaccttagtgaaagtaagtgtttactgtcagggacctaactgatagtaagtatgcacagtcagggacctaacatcaaaagtctcccgcaaccacataac 28526368  T
Q  120 aacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcggttcaacgaacaaagtgacaa 218  Q
    |||         |||||||||  ||||| ||| ||||| |||||||| ||||  ||||||||| |||||||||||||||||||||  | |||| |||  |    
T  28526369 aacg--------gaagatgactcagttcttgacgaagagcaacacttcgttgagacgagtttg-agatattgattttcggttcaagaaccaaaatgatca 28526459  T
Q  219 ttttttactttcactttagtcagtgtgacacctcata 255  Q
    |||| || |||||||||||||| | ||||||||||||    
T  28526460 ttttctattttcactttagtcactatgacacctcata 28526496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 345
Target Start/End: Original strand, 9626382 - 9626502
Alignment:
Q  224 tactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaag 323  Q
    |||||||||||||||   ||||||||||||||| |||||||||||||| ||||||||||  |||||  ||||  | |||||||||||||||| |||||||    
T  9626382 tactttcactttagttcatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaa-catattatttaacgtcagaaactaaag 9626480  T
Q  324 tgataatggaagtgcacattca 345  Q
    | |||| ||||| ||| |||||    
T  9626481 taataacggaagcgcatattca 9626502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 31074212 - 31074075
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattattta 307  Q
    ||||||||  ||||| || |||||||||||||   |||||||||||||||| |||| ||||||| || |||| ||  |||||  |||| |||||||||||    
T  31074212 caaagtgatcattttctattttcactttagtccccgtgacacctcataccccttgttagcataaaacatttgccacatcatcagttaacaaaattattta 31074113  T
Q  308 acgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |   ||||||||||||||||||  ||||||||||||||    
T  31074112 attccagagactaaagtgataacagaagtgcacattca 31074075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 345
Target Start/End: Original strand, 28006471 - 28006637
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    ||||| ||||||||||||  |||||  || ||||||||| | ||| || |||||||||||||  ||||| || |||||| |  ||||||||||| |||||    
T  28006471 tttggggatattgatttttagttcagtgaccaaagtgaccactttctattttcactttagtccttgtgatacatcatactccctgtcagcataa-acttt 28006569  T
Q  278 tgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |||||  |||||  |||| | |||||||||||||||| |  ||||||||||| |||||| ||||||||    
T  28006570 tgtcatatcatcagttaacagaattatttaacgtcaggggttaaagtgataacggaagtacacattca 28006637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 345
Target Start/End: Original strand, 28063774 - 28063940
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    ||||| ||||||||||||  |||||  || ||||||||| | ||| || |||||||||||||  ||||| || |||||| |  ||||||||||| |||||    
T  28063774 tttggggatattgatttttagttcagtgaccaaagtgaccactttctattttcactttagtccttgtgatacatcatactccctgtcagcataa-acttt 28063872  T
Q  278 tgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |||||  |||||  |||| | |||||||||||||||| |  ||||||||||| |||||| ||||||||    
T  28063873 tgtcatatcatcagttaacagaattatttaacgtcaggggttaaagtgataacggaagtacacattca 28063940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 41121353 - 41121276
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||| || ||||||||||||||| |||||||||||||| |  ||| ||||||||||    
T  41121353 tttggggatattgatttttggttcaaggaccaaagtgacaattttctactttcactttagcccttgttacacctcata 41121276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 41122637 - 41122714
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    |||||||||||||||||| ||||||  || ||||||||| ||||| || |||||||||||||| |||||||| |||||    
T  41122637 tttggagatattgatttttggttcagggatcaaagtgacgattttctattttcactttagtcaatgtgacacttcata 41122714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 28005552 - 28005441
Alignment:
Q  217 aattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagag 316  Q
    |||||||||||||||||||||||  | |||||||| |||| |||||| || |||| ||||||| ||  |||||  || | | ||||||||||| || |||    
T  28005552 aattttttactttcactttagtccttatgacaccttatactctttgttagtataaaacttttgccacatcatcaattcacataattatttaacatcggag 28005453  T
Q  317 actaaagtgata 328  Q
    ||||||||||||    
T  28005452 actaaagtgata 28005441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 28062855 - 28062744
Alignment:
Q  217 aattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagag 316  Q
    |||||||||||||||||||||||  | |||||||| |||| |||||| || |||| ||||||| ||  |||||  || | | ||||||||||| || |||    
T  28062855 aattttttactttcactttagtccttatgacaccttatactctttgttagtataaaacttttgccacatcatcaattcacataattatttaacatcggag 28062756  T
Q  317 actaaagtgata 328  Q
    ||||||||||||    
T  28062755 actaaagtgata 28062744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 41754210 - 41754127
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagc 267  Q
    |||||||||||||| ||||  || ||||||||| ||||||||||||||||||||||  | |||||| |||||| | ||||||||    
T  41754210 gatattgattttcgattcagggaccaaagtgactattttttactttcactttagtccctatgacacgtcatactccttgtcagc 41754127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 2552254 - 2552186
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    ||||||||||||||||||   | ||||||||||||||| ||||||||||||||||  |||||||||||||    
T  2552254 atattgattttcggttcagaaaccaaagtgacaattttctactttcactttagtc-ctgtgacacctcat 2552186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 41754687 - 41754768
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtca 265  Q
    |||||||||||||| ||||  || ||||||||| ||||||||||||||||||| ||  |||||||| |||||| | ||||||    
T  41754687 gatattgattttcgattcatggaccaaagtgaccattttttactttcactttaatccctgtgacacatcatactccttgtca 41754768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 30134807 - 30134743
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacac 249  Q
    ||||||||||| |||| || || ||||||||||||||| ||||||||||||||||  ||||||||    
T  30134807 atattgatttttggttaaaggaccaaagtgacaattttctactttcactttagtctctgtgacac 30134743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 32898346 - 32898417
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    |||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  32898346 gatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcata 32898417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 45476403 - 45476336
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctc 252  Q
    ||||||||||| ||||||  || ||||||||||||||| |||||||||||| |||  |||||||||||    
T  45476403 atattgatttttggttcagggaccaaagtgacaattttctactttcactttggtctctgtgacacctc 45476336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 28006313 - 28006423
Alignment:
Q  37 taagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttcatcgaagaaga 136  Q
    |||||||||| ||||| |||| ||||||||||||||||| |||| |||| || ||||||  ||||||  | |||||| | ||||||||  | || |||||    
T  28006313 taagtgtttactgtcagggacctaactgatagtaagtatgcacaatcagggacctaacagaaagtctctcgcaaccacataacaactttgttgaggaaga 28006412  T
Q  137 tgaccaagttc 147  Q
    ||||| |||||    
T  28006413 tgacccagttc 28006423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 28063616 - 28063726
Alignment:
Q  37 taagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttcatcgaagaaga 136  Q
    |||||||||| ||||| |||| ||||||||||||||||| |||| |||| || ||||||  ||||||  | |||||| | ||||||||  | || |||||    
T  28063616 taagtgtttactgtcagggacctaactgatagtaagtatgcacaatcagggacctaacagaaagtctctcgcaaccacataacaactttgttgaggaaga 28063715  T
Q  137 tgaccaagttc 147  Q
    ||||| |||||    
T  28063716 tgacccagttc 28063726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 28619539 - 28619581
Alignment:
Q  297 aaaattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  28619539 aaaattatttaatgtcagagactaaagtgataatagaagtgca 28619581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 33315106 - 33315016
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagca 268  Q
    ||||| |||||| ||||||  ||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||| | |||||||||    
T  33315106 tttggggatattaattttcaattcacggaccaaagtgactattttctactttcactttggtccatgtgacacctcatactccttgtcagca 33315016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 5737898 - 5737975
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| | || |  || ||||||||| |||||||||||| |||||||||  ||||||||||||||    
T  5737898 tttggggatattgatttttgatttagagaccaaagtgaccattttttacttttactttagtccatgtgacacctcata 5737975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 10406434 - 10406357
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    |||||| ||||||||||| ||||||  || ||||||||| ||||| |||| ||||||| |||  ||||||||||||||    
T  10406434 tttggaaatattgatttttggttcagagaccaaagtgactattttctactatcactttggtccctgtgacacctcata 10406357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 5965442 - 5965478
Alignment:
Q  303 atttaacgtcagagactaaagtgataatggaagtgca 339  Q
    ||||||||||||||||||||||||||| |||||||||    
T  5965442 atttaacgtcagagactaaagtgataacggaagtgca 5965478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 32898188 - 32898240
Alignment:
Q  43 tttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||| ||||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  32898188 tttactgtcagggacctaactgatagtaagtatgcacagtcagagacctaaca 32898240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 336
Target Start/End: Original strand, 1952968 - 1953003
Alignment:
Q  301 ttatttaacgtcagagactaaagtgataatggaagt 336  Q
    ||||||||||||||||||||||||||||| ||||||    
T  1952968 ttatttaacgtcagagactaaagtgataacggaagt 1953003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 10406567 - 10406512
Alignment:
Q  46 attgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||| |||| ||||||||||||||||| ||||||||| || ||||||| ||||    
T  10406567 attgtcagggacctaactgatagtaagtatgcacagtcagggacctaacaataagt 10406512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 1952705 - 1952771
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcaga 86  Q
    |||||||||||||| |||  |||| || ||||| |||| ||||||||||||| ||| ||||||||||    
T  1952705 agggactttagtgaaatttcgtgtatactgtcagggacctaactgatagtaaatatgcacagtcaga 1952771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 1952872 - 1952942
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  | ||||||||||||    
T  1952872 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctatgacacctcata 1952942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 10407304 - 10407382
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaaca 98  Q
    ||||||||| |||| |||  ||||||| |||||  |||||||||||||||||||||  |||||||  || |||||||||    
T  10407304 agggacttttgtgaaatttcgtgtttactgtcagtgacttaactgatagtaagtatgaacagtcacggacctaacaaca 10407382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 13144588 - 13144530
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcacttta 236  Q
    |||||| ||||||||||||| || |  || ||||||||||||||| |||||||||||||    
T  13144588 tttggaaatattgattttcgattaagggatcaaagtgacaattttctactttcacttta 13144530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 2561408 - 2561339
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctca 253  Q
    ||||||||||||||||||||  | |||| | || ||||| |||||||| |||||||| |||||| |||||    
T  2561408 gatattgattttcggttcaagaaccaaaatcactattttctactttcattttagtcactgtgacgcctca 2561339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 9626210 - 9626319
Alignment:
Q  90 ctaacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatat 188  Q
    |||||||||||||| ||||||||| |  |||||||||| ||  ||||||||  ||||| ||| |||||  |||||||  |||| ||||||||   |||||    
T  9626210 ctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgacttagttcttgacgaagagaaacacttccttgggacgagtttaaggatat 9626309  T
Q  189 tgattttcgg 198  Q
    ||||||||||    
T  9626310 tgattttcgg 9626319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 32564201 - 32564282
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    |||||| ||||||| | || |||||||||||||  ||| ||||||||||||| ||| |||||||  |||||| |||| ||||    
T  32564201 agggaccttagtgagagtacgtgtttattgtcagagacctaactgatagtaaatattcacagtccaagatcttacaataagt 32564282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 39138235 - 39138288
Alignment:
Q  22 ggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtat 75  Q
    |||||||||||||  ||||||||||||||||| ||| ||| |||||| ||||||    
T  39138235 ggactttagtgacggtaagtgtttattgtcaaagacctaattgatagaaagtat 39138288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 35177796 - 35177720
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaa 96  Q
    ||||||| |||||| |||  ||||||| ||| | |||| ||||||||||||||||| || |||||| || |||||||    
T  35177796 agggactgtagtgaaattttgtgtttactgtaagggacctaactgatagtaagtatgcatagtcagggacctaacaa 35177720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 32244593 - 32244730
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattattta 307  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| |  ||||||| ||||||  |||| |||||||||||    
T  32244593 caaagtaacaattttttactttcactttagtcactgtgacacctcatactccttgtcagcataaaatctttgtcacgtcatcggttaacaaaattattta 32244692  T
Q  308 acgtcagagactaaagtgataatggaagtgcacattca 345  Q
    ||||||| |||||||||||||| ||| |||||||||||    
T  32244693 acgtcagggactaaagtgataacggatgtgcacattca 32244730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 32244516 - 32244357
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||||||||||||| ||  || ||||||||| ||||||||||||||||||||||  ||||||||| ||||| |||||||||||||| || || |||      
T  32244516 gatattgattttcggtgcagagatcaaagtgaccattttttactttcactttagtctctgtgacaccccatactctttgtcagcataaaaccttcgtcgc 32244417  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacatt 343  Q
    ||||||  |||| | ||||||||||||| |  ||| |||||||||| |||||||||||||    
T  32244416 gtcatcacttaacataattatttaacgttatggaccaaagtgataacggaagtgcacatt 32244357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 24745736 - 24745929
Alignment:
Q  2 ctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    |||||||||| || | |||||||| ||||||||| |||||||||| ||||| |||| ||||||||||||| ||||||||||||| || |||||| ||| |    
T  24745736 ctgtaagtgtctactgttagggaccttagtgacagtaagtgtttactgtcagggacctaactgatagtaattatacacagtcagggacctaacagcaaat 24745835  T
Q  102 cttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctg-agaagaacaacactttgttggaacgagtttggagatattgatttt 195  Q
    || | |||| || | ||||||||||| || |||||||||| | ||| ||  ||||  |||||||||||||| ||||||||||  ||||| |||||    
T  24745836 ctccaacaagcacataacaacttcattgaggaagatgacccaattcttgtcgaagtgcaacactttgttgg-acgagtttgggaatattaatttt 24745929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 24753236 - 24753430
Alignment:
Q  2 ctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||||||||| | | || ||| ||||||||| |||||||||| ||||| |||| ||||||||||||| ||| ||||||||| || || |||| ||||    
T  24753236 ctgtaagtgtttaatgtcagagaccttagtgacagtaagtgtttactgtcagggacctaactgatagtaattatgcacagtcagggacctcacaaaaagt 24753335  T
Q  102 cttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgatttt 195  Q
    || |  ||||||||||||||||||||  | ||||||  || | ||| ||| ||||| || ||||| ||||| |||||||||||||||||| ||||    
T  24753336 ctccagcaaccatagaacaacttcattaaggaagattgcccaattcttgacgaagatcagcacttcgttgggacgagtttggagatattggtttt 24753430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 187 - 345
Target Start/End: Original strand, 21623001 - 21623159
Alignment:
Q  187 attgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtc 286  Q
    ||||||||||||||||  || ||||||||| ||||| |||||||| |||||||  ||||||||||||||| | ||||||| |||| |||| || ||  ||    
T  21623001 attgattttcggttcatagagcaaagtgaccattttctactttcattttagtctctgtgacacctcatactccttgtcagtataaaacttgtgccacatc 21623100  T
Q  287 atcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    ||   |||| | |||||||||||||| | ||||||||||||||  ||||||||||||||    
T  21623101 attagttaacataattatttaacgtcggggactaaagtgataacagaagtgcacattca 21623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 343
Target Start/End: Original strand, 24745956 - 24746115
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||| |||| |||||||  || |||||||| |||||| || ||||||||||||| |||||||||||||| | ||||  |||||||| ||||||||||     
T  24745956 gatattaatttccggttcagggaccaaagtgataattttctattttcactttagtctgtgtgacacctcattctcttttccagcataaaacttttgtcac 24746055  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacatt 343  Q
     |  |   |||||||||||||||||||||   || ||||||||||| |||||||||||||    
T  24746056 attgtgagttaataaaattatttaacgtcgtggattaaagtgataacggaagtgcacatt 24746115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 21622041 - 21621904
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattattta 307  Q
    ||||||||| ||||| |||||||||||||||   |||||||| |||||| | | |||||| ||| |  |||||||  |||||  |||| | |||||||||    
T  21622041 caaagtgaccattttatactttcactttagtgcttgtgacacatcatactcctcgtcagcgtaaaatctttgtcacatcatcagttaacataattattta 21621942  T
Q  308 acgtcagagactaaagtgataatggaagtgcacattca 345  Q
    || |||| |||||||||||||| |||||||||||||||    
T  21621941 acatcagggactaaagtgataacggaagtgcacattca 21621904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 24753466 - 24753603
Alignment:
Q  209 aaagtgacaatttt-ttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattattta 307  Q
    |||||||||||||| |||||||||||||||||   |||||||||||  | ||||| |||||||| ||||||| ||  |||||  |||| |||||||||||    
T  24753466 aaagtgacaatttttttactttcactttagtctccgtgacacctcaatctctttgacagcataaaacttttgccacatcatcagttaacaaaattattta 24753565  T
Q  308 acgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |||  |  ||||||||||||||  ||||||||||||||    
T  24753566 acgcgaatgactaaagtgataacagaagtgcacattca 24753603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 345
Target Start/End: Complemental strand, 2786467 - 2786302
Alignment:
Q  182 gagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtc 281  Q
    |||||||||||||||||||||  || ||||||||| ||||| |||||| |||||| ||  | |||||| |||||| |||||| ||||||  |  ||||||    
T  2786467 gagatattgattttcggttcagagaccaaagtgaccattttctacttttactttaatccatatgacacttcatactctttgtgagcatacaatctttgtc 2786368  T
Q  282 aggtcatcttttaataaaattatttaacgtca-ga-gactaaagtgataatggaagtgcacattca 345  Q
    |  | |||  |||| ||||||||||||||||| ||  |||||| |||||| |||||||||||||||    
T  2786367 acattatcagttaacaaaattatttaacgtcatgataactaaaatgataacggaagtgcacattca 2786302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 339
Target Start/End: Complemental strand, 19050478 - 19050325
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||||||||| | ||||| || ||||||||  ||||| ||||||||||||||||  ||||||||||||||  |  | ||| | ||| || |  ||||     
T  19050478 gatattgatttttgcttcaaggaccaaagtgatcattttatactttcactttagtccatgtgacacctcatatgccatatcatcgtaaaacat--gtcac 19050381  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
     |||||  |||||| |||||||||||||| |||||||||||||||| |||||||||    
T  19050380 atcatcacttaatagaattatttaacgtcggagactaaagtgataacggaagtgca 19050325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 39869137 - 39869007
Alignment:
Q  209 aaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaa 308  Q
    |||||||| ||||| |||||||| |||||||| |||||||||| |||     ||||| ||||| |  | |||||  |||||  |||| | ||||||||||    
T  39869137 aaagtgactattttatactttcaatttagtcattgtgacacctgatatgtcatgtcatcataaaatatgtgtcacatcatcacttaacataattatttaa 39869038  T
Q  309 cgtcagagactaaagtgataatggaagtgca 339  Q
    ||||||||||||||||||||| |||||||||    
T  39869037 cgtcagagactaaagtgataacggaagtgca 39869007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 21622260 - 21622192
Alignment:
Q  27 ttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    ||||||||  |||||||||||||| |  ||| ||||||||||||||||| |||||||||||| ||||||    
T  21622260 ttagtgactgtaagtgtttattgttagagacctaactgatagtaagtatgcacagtcagagacctaaca 21622192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 25810314 - 25810384
Alignment:
Q  183 agatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    |||||||||||||| |||||| || |||| |||| ||||| ||||||||||||||||  |||||||||||||    
T  25810314 agatattgattttcagttcaaagaccaaa-tgactattttatactttcactttagtccatgtgacacctcat 25810384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 47874785 - 47874714
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    |||||||||||| ||||||| || ||||||||| ||||| |||||||||||| |||  |||||||| |||||    
T  47874785 gatattgatttttggttcaaggaccaaagtgaccattttatactttcactttggtccctgtgacacatcata 47874714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 328
Target Start/End: Complemental strand, 6039369 - 6039219
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    ||||| |||||| ||||||||||||  || ||||||||| ||||| |||  ||||||| |||  | ||||||||||||| | |||||||||||| |  |     
T  6039369 tttggggatattaattttcggttcagggagcaaagtgaccattttctacactcactttggtccctatgacacctcatactcattgtcagcataaaatatg 6039270  T
Q  278 tgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgata 328  Q
    ||||| |||||| ||||| ||| ||  |||||| ||  ||||||| |||||    
T  6039269 tgtcacgtcatcatttaacaaattttattaacggcacggactaaaatgata 6039219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 20599788 - 20599858
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| ||||| ||||||  || ||||||||| |||||||||||||| |||||||  ||||||||||||||    
T  20599788 atattaatttttggttcagggaccaaagtgaccattttttactttcattttagtccctgtgacacctcata 20599858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 4703092 - 4703153
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtc 239  Q
    ||||| |||||||||||| || |||  || ||||||||||||||| ||||||||||||||||    
T  4703092 tttggggatattgatttttgggtcagggaccaaagtgacaattttatactttcactttagtc 4703153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 25810415 - 25810456
Alignment:
Q  305 ttaacgtcagagactaaagtgataatggaagtgcacattcat 346  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  25810415 ttaacgtcagagactaaagtgatagcggaagtgcacattcat 25810456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 42278277 - 42278200
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||  || ||||||||| ||||| || ||||||||| |||  ||||||||||||||    
T  42278277 tttggggatattgatttttggttcagggaccaaagtgaccattttctagtttcactttggtccctgtgacacctcata 42278200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 26170819 - 26170727
Alignment:
Q  247 cacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||| | |||||||||||| || | |||||  |||||  |||| |||||| ||||||  ||  ||||||||||||||||||||||||    
T  26170819 cacctcatactccttgtcagcataaaacatgtgtcacatcatcacttaacaaaattttttaacagcatggactaaagtgataatggaagtgca 26170727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 26685418 - 26685458
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  26685418 aattatttaatgtcagagactaaagtgataacggaagtgca 26685458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 31844869 - 31844917
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcatac 256  Q
    ||||||||| ||||||||||||||||||||||  |||||||| ||||||    
T  31844869 caaagtgaccattttttactttcactttagtccttgtgacacgtcatac 31844917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 53770460 - 53770420
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  53770460 aattatttaacggcagagactagagtgataatggaagtgca 53770420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 21622821 - 21622970
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaac 119  Q
    |||||| ||||||||| ||| | |||| ||||| |||| ||||||||||||||||| |||| |||  || ||   ||||||||| |  |||||| | |||    
T  21622821 agggaccttagtgacaataattttttactgtcatggacctaactgatagtaagtatgcacaatcatggacct---aacaagtctcctgcaaccacaaaac 21622917  T
Q  120 aacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttgg 171  Q
    |||||||| || | |||||||| ||||| |||  |||||||| | ||||||||    
T  21622918 aacttcattgaggtagatgacccagttcttgacaaagaacaataatttgttgg 21622970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 47878386 - 47878456
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  | ||||||||||||    
T  47878386 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctatgacacctcata 47878456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 48739944 - 48740006
Alignment:
Q  187 attgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacac 249  Q
    ||||||||| ||||||  ||  |||||||| ||||||||||||||||||||||  ||||||||    
T  48739944 attgatttttggttcagggactaaagtgactattttttactttcactttagtctttgtgacac 48740006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 4703206 - 4703251
Alignment:
Q  292 ttaataaaattatttaacgtcagagactaaagtgataatggaagtg 337  Q
    |||||| |||||||||| | |||||||||||||||||| |||||||    
T  4703206 ttaatagaattatttaatgccagagactaaagtgataacggaagtg 4703251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 48740016 - 48740056
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  48740016 aattatttaacgtcagggactaaagtgataacagaagtgca 48740056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 53771045 - 53771085
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||||||  |||||||||||||| |||||||||    
T  53771045 aattatttaacgtcaatgactaaagtgataacggaagtgca 53771085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 342
Target Start/End: Complemental strand, 26585500 - 26585162
Alignment:
Q  2 ctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||||||||| | | || ||| ||| ||||| | |||||||| ||||| |||| ||||| ||||||| ||| |||| |||  || ||||||||||||    
T  26585500 ctgtaagtgtttactgtcagagaccttaatgacagtgagtgtttagtgtcagggacctaactcatagtaaatatgcacaatcaaggacctaacaacaagt 26585401  T
Q  102 cttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcggtt 200  Q
    || ||||||| | ||||||||||||| ||  ||||||||| |||||  ||  |||| |||||||| ||||||| ||||||   |||||| ||||||||||    
T  26585400 ctcccacaactacagaacaacttcattgagaaagatgacccagttctagacaaagagcaacacttcgttggaatgagtttaaggatatttattttcggtt 26585301  T
Q  201 caacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaa 300  Q
    ||  || ||||||||| | ||| || |||||||||||||  ||||||||||||||| | |||||| ||||| |  | |||||  |||||  |||| | ||    
T  26585300 cagggaccaaagtgacca-tttctattttcactttagtccctgtgacacctcatactccttgtcaacataaaa--tatgtcacatcatcaattaacataa 26585204  T
Q  301 ttatttaacgtcagagactaaagtgataatggaagtgcacat 342  Q
    ||||||||||  |||||||||||||||||  |||||| ||||    
T  26585203 ttatttaacgctagagactaaagtgataacagaagtgtacat 26585162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 90 - 345
Target Start/End: Original strand, 14887284 - 14887540
Alignment:
Q  90 ctaacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatat 188  Q
    |||||| || |||| || |||||| |||||||| |||| || |||||||||| ||||| ||| ||||| |||||||| ||||| |||||||||  |||||    
T  14887284 ctaacatcaggtctcccgcaaccacagaacaacgtcattgaggaagatgacctagttcttgaagaagagcaacacttcgttgggacgagtttgaggatat 14887383  T
Q  189 tgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcat 288  Q
    |||||||   ||||  || || | |||| ||||| ||||||||||||||||  ||||||||||||||| | |||| ||||||| || |||||||  ||||    
T  14887384 tgatttttaattcagggaccatattgaccattttctactttcactttagtccctgtgacacctcatactccttgttagcataaaacatttgtcacatcat 14887483  T
Q  289 cttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |  |||| ||||||||||||||  ||||| ||||||||  |||||| ||||||||||    
T  14887484 cagttaacaaaattatttaacgctagagattaaagtgacgatggaattgcacattca 14887540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 343
Target Start/End: Complemental strand, 38853994 - 38853838
Alignment:
Q  187 attgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtc 286  Q
    ||||||||||||||||| || ||| | ||| ||| | |||||||| |||||||  ||||||||||||||| | |||| ||||||| |||||||||| |||    
T  38853994 attgattttcggttcaaggaccaaggcgactattatctactttcaatttagtccctgtgacacctcatactccttgttagcataaaacttttgtcacgtc 38853895  T
Q  287 atcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacatt 343  Q
    ||   |||| | |||||||||||||||| ||||||| |||||| |||||||||||||    
T  38853894 atgagttaacataattatttaacgtcagtgactaaattgataacggaagtgcacatt 38853838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 37607344 - 37607185
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||||||||| ||||||  || ||||||||| ||||| ||| ||||||||||||  ||||||| |||||||   |||| ||||||| || |||||||     
T  37607344 gatattgatttttggttcagagaccaaagtgactattttctacgttcactttagtccttgtgacatctcatacttcttgttagcataaaacctttgtcac 37607245  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacatt 343  Q
    ||||||  |||| | |||||| ||||||||| |||||||||||||| |||||||||||||    
T  37607244 gtcatcagttaacataattatataacgtcagggactaaagtgataacggaagtgcacatt 37607185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 342
Target Start/End: Complemental strand, 18675325 - 18675168
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||| ||||| | ||||| || ||||||||||||||| |||||| |||||||||  |||||||||||||||  ||| ||||||||| || |||||||     
T  18675325 gatattaatttttgattcaaggatcaaagtgacaattttctactttgactttagtcc-tgtgacacctcatactttttatcagcataaaacatttgtcac 18675227  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacat 342  Q
     | |||  |||| |||||||||| ||| || ||||||||||||||||||||||||||||    
T  18675226 attatcagttaacaaaattatttgacgccaaagactaaagtgataatggaagtgcacat 18675168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 328
Target Start/End: Original strand, 18676587 - 18676848
Alignment:
Q  68 gtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacacttt 166  Q
    |||||||| ||||||||  || |||||| ||||||||||||||||| ||| || |||||| || |||||||||| ||||| ||| |||||  |||||||     
T  18676587 gtaagtatgcacagtcacggacctaacatcaagtcttccacaaccacagatcagcttcattgaggaagatgacctagttcttgacgaagagtaacacttc 18676686  T
Q  167 gttggaacgagtttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcag 266  Q
    ||||  |||| ||||||||||||||||||  |||||  || ||||||||| ||||| ||||||| ||||||||  | |||||  |||||| | ||||| |    
T  18676687 gttgagacgactttggagatattgattttttgttcagggaccaaagtgaccattttctactttcgctttagtctctttgacatttcatactccttgtcgg 18676786  T
Q  267 cataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgata 328  Q
    ||||| |   ||  || ||||||  |||| |  ||||||||||| ||||||||| |||||||    
T  18676787 cataaaatcattaccacgtcatcagttaacatcattatttaacgccagagactagagtgata 18676848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 38854225 - 38854342
Alignment:
Q  22 ggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaa 121  Q
    |||| ||||||| | |||||| ||||||||| |||| || |||||||||||||| |||||||| ||| |||||||||||||| || ||||||||||||||    
T  38854225 ggaccttagtgatagtaagtgattattgtcagggacctagctgatagtaagtatgcacagtcaaagacctaacaacaagtctcccgcaaccatagaacaa 38854324  T
Q  122 cttcatcgaagaagatga 139  Q
    |||||| || ||||||||    
T  38854325 cttcattgaggaagatga 38854342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 197
Target Start/End: Complemental strand, 18675545 - 18675349
Alignment:
Q  2 ctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||||||||| | | | |||| ||||||||| ||| | |||||||||| |||| ||||||||||||||||| |||||||||  | |||||| |||||    
T  18675545 ctgtaagtgtttactgtcaaggacattagtgacaataaatatttattgtcagggacctaactgatagtaagtatgcacagtcaggaacctaacatcaagt 18675446  T
Q  102 cttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcg 197  Q
    || ||  |||||   ||||||||||| || |||||| ||| ||||| ||| |||||  |||||||  |||| |||||||||| ||||||||||||||    
T  18675445 ctcccgtaaccacctaacaacttcattgaggaagataacctagttcttgacgaagagaaacacttctttgggacgagtttggggatattgattttcg 18675349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 90 - 271
Target Start/End: Complemental strand, 14886793 - 14886612
Alignment:
Q  90 ctaacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatat 188  Q
    |||||||||||||| || |||| | | ||||| ||||| || ||||||||||| |||| ||| ||||   ||||||| |||| ||| ||||||| |||||    
T  14886793 ctaacaacaagtctcccgcaacaacaaaacaatttcattgatgaagatgacca-gttcttgacgaagcgtaacacttcgttgaaacaagtttggggatat 14886695  T
Q  189 tgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataa 271  Q
    |||||||| |||||| || ||||| ||||||||| |||||||| |||||||  | |||| |||||||| ||||||||||||||    
T  14886694 tgattttctgttcaaggaccaaagcgacaattttgtactttcattttagtccctatgacgcctcatactctttgtcagcataa 14886612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 345
Target Start/End: Original strand, 26586176 - 26586337
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||| ||||||||||||  || | ||||||||||||| ||||||||||||||||  |  | |||||||||| ||||||||||| ||  | ||| |||     
T  26586176 gatattaattttcggttcagagatcgaagtgacaattttctactttcactttagtctctacggcacctcatactctttgtcagcacaaatcctttatcat 26586275  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |||||    ||| | |||||||||||| |||||||||||||||||| |||||||||||||||    
T  26586276 gtcataaactaacataattatttaacgccagagactaaagtgataacggaagtgcacattca 26586337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 218 - 345
Target Start/End: Original strand, 12746116 - 12746243
Alignment:
Q  218 attttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagaga 317  Q
    ||||| ||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||  | |||  ||| || ||||||||||| | |  ||    
T  12746116 attttctactttcactttagtccctgtgacacctcatactctttgtcagcataaaacttttgtcacataatcacttactagaattatttaacattatgga 12746215  T
Q  318 ctaaagtgataatggaagtgcacattca 345  Q
    |||||||||||| ||||| |||||||||    
T  12746216 ctaaagtgataacggaagggcacattca 12746243  T

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Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 218 - 345
Target Start/End: Original strand, 34582585 - 34582712
Alignment:
Q  218 attttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagaga 317  Q
    ||||| |||||| ||||||||   ||||||||||||||||  |||||||||||| || |||| ||  | |||  || ||| |||||||||||||||| ||    
T  34582585 attttctacttttactttagttcatgtgacacctcatacctcttgtcagcataaaacctttgccacatgatcagttgatataattatttaacgtcaggga 34582684  T
Q  318 ctaaagtgataatggaagtgcacattca 345  Q
    |||||||||||| |||||||||||||||    
T  34582685 ctaaagtgataacggaagtgcacattca 34582712  T

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Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 21733653 - 21733739
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataa 271  Q
    ||||||||||||||||||  || ||||||||| |||||||||||||||||||||||  ||||||| |||||| | ||||||||||||    
T  21733653 atattgattttcggttcagagaccaaagtgaccattttttactttcactttagtcatcgtgacacttcatactccttgtcagcataa 21733739  T

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Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 26586061 - 26586173
Alignment:
Q  91 taacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatatt 189  Q
    ||||||||  ||| || |||||| |||||||||||||||| ||| |||||||||||  ||| ||||| |||||||||||||| | |||||||| ||||||    
T  26586061 taacaacacatctcccgcaaccacagaacaacttcatcgaggaaaatgaccaagtttttgacgaagagcaacactttgttgggatgagtttggggatatt 26586160  T
Q  190 gattttcggttca 202  Q
    |||||| ||||||    
T  26586161 gatttttggttca 26586173  T

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Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 31443120 - 31443196
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    |||||||||||||||||||||||||   | |||| |||||||||| ||||||||||||||||| |||||||||||||    
T  31443120 tttggagatattgattttcggttcaggaaccaaaatgacaattttctactttcactttagtcactgtgacacctcat 31443196  T

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Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 17466733 - 17466864
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattattta 307  Q
    |||| |||| |||||||||||||||||||||  |||||||||||||||  | |||||| | ||| || | |||||  |||||  |||| | |||||||||    
T  17466733 caaattgaccattttttactttcactttagtgcgtgtgacacctcatatgccttgtcatcctaaaacatgtgtcacatcatcacttaacagaattattta 17466832  T
Q  308 acgtcagagactaaagtgataatggaagtgca 339  Q
    |||||  ||||||||||||||| |||||||||    
T  17466833 acgtcttagactaaagtgataacggaagtgca 17466864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 339
Target Start/End: Original strand, 34037554 - 34037709
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    |||||||||||| ||||||   | ||||||||| ||||| |||| ||||||||||| |||||||||||||||| | |||||||||||| || | |||||     
T  34037554 gatattgatttttggttcaggaatcaaagtgactattttctactgtcactttagtctgtgtgacacctcatactccttgtcagcataaaacatgtgtcac 34037653  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
     |||||  |||| | |||| ||||||| | |  |||||||||||||  ||||||||    
T  34037654 atcatcacttaacataattttttaacggcgggaactaaagtgataacagaagtgca 34037709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 343
Target Start/End: Complemental strand, 38855028 - 38854872
Alignment:
Q  187 attgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtc 286  Q
    ||||||||||||||||| || ||| ||||| ||| | |||||||| ||||| |  ||||||||||||||| | |||| |||||||   |||||||| |||    
T  38855028 attgattttcggttcaaggaccaaggtgactattatctactttcaatttagcccctgtgacacctcatactccttgttagcataaattttttgtcacgtc 38854929  T
Q  287 atcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacatt 343  Q
    ||   |||| | ||||||||||| |||| ||||||| ||||||   |||||||||||    
T  38854928 atgagttaacataattatttaacttcagtgactaaattgataacataagtgcacatt 38854872  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 17330120 - 17330191
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    |||||||||||| ||||||  || ||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  17330120 gatattgattttgggttcagggaccaaagtgaccattttttactttcactttagtctctgtgacacctcata 17330191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 340
Target Start/End: Complemental strand, 7412334 - 7412178
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcag 283  Q
    ||||||| |||| |||| |  |||||||||||| ||||| || |||||||||||||  |||||||| |||||  |  ||||| | ||| || | |||||     
T  7412334 gatattgttttttggttgagggaacaaagtgaccattttctattttcactttagtccttgtgacacatcatatgccatgtcatcgtaaaacatgtgtcat 7412235  T
Q  284 gtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcac 340  Q
    ||||||  |||| | |||||||||| || || |||||||||||||| ||||||||||    
T  7412234 gtcatcacttaacataattatttaatgttagggactaaagtgataacggaagtgcac 7412178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 34582349 - 34582533
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaac 119  Q
    |||||| | ||||||| |||||||||| | ||| |||| ||||||||||||||||| || |||||  || ||| || ||||||  || ||||||   |||    
T  34582349 agggacctaagtgacagtaagtgtttactatcagggacctaactgatagtaagtatgcatagtcatggacctaccagcaagtcagccgcaaccactaaac 34582448  T
Q  120 aacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcggttcaa 203  Q
    | |||||| |  ||| |||||| ||||  ||| ||||| |||||||||||||||| |||||||  |||||||||||  |||||||    
T  34582449 agcttcattggggaatatgacccagttattgacgaagagcaacactttgttggaatgagtttgaggatattgatttatggttcaa 34582533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12010635 - 12010561
Alignment:
Q  1 tctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtat 75  Q
    |||||||||||||| ||| | |||| ||||||||||||||| |||| | ||| |||| |||||||||||||||||    
T  12010635 tctgtaagtgtttactatcatggaccttagtgacattaagtatttactatcagggacctaactgatagtaagtat 12010561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 31091429 - 31091499
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||| || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  31091429 atattgatttttggttcaaagaccaaagtgaccattttctactttcactttggtctctgtgacacctcata 31091499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 39016285 - 39016355
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||||||||| |||||||||||| |||  ||||||||||||||    
T  39016285 atattgatttttggttcagggaccaaagtgacaattttctactttcactttggtccatgtgacacctcata 39016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 14704233 - 14704156
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  14704233 tttggggatattgatttttggttcatggaccaaagtgactattttctactttcactttggtccctgtgacacctcata 14704156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 15441920 - 15442013
Alignment:
Q  252 cataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    ||||| |||||||||||||| || |||| ||  |||||  |||| |||||||||||||   ||||||||||||||||||  |||||||||||||    
T  15441920 catactctttgtcagcataaaacatttgccacatcatcagttaacaaaattatttaacactagagactaaagtgataataaaagtgcacattca 15442013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 43380815 - 43380738
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||  || ||||||||| ||||| |||||||||||||||   ||||||||||||||    
T  43380815 tttggggatattgatttttggttcagggaccaaagtgaccattttctactttcactttagttcatgtgacacctcata 43380738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 2910503 - 2910428
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||||||| |||  ||||||| ||||| |||| ||||||||| ||||||| ||||||||| || ||||||    
T  2910503 agggactttagtgaaatttcgtgtttactgtcagggacctaactgatattaagtatgcacagtcagggacctaaca 2910428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 12004544 - 12004619
Alignment:
Q  18 ttagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaa 93  Q
    |||||||| ||||||||| |||||||||| ||||| | || ||||||||||||||||| |||| ||| ||| ||||    
T  12004544 ttagggaccttagtgacagtaagtgtttactgtcaggaacctaactgatagtaagtatgcacaatcatagacctaa 12004619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 32765336 - 32765265
Alignment:
Q  24 actttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||| |||  ||||||| ||||| |||| ||||||||||||||||| ||||||||| || ||||||    
T  32765336 actttagtgaaatttcgtgtttactgtcagggacctaactgatagtaagtatgcacagtcagggacctaaca 32765265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 32766027 - 32766082
Alignment:
Q  46 attgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    ||||||| |||| ||||||||||||||||| |||||||||||| ||||||| ||||    
T  32766027 attgtcagggacctaactgatagtaagtatgcacagtcagagacctaacaataagt 32766082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 39015226 - 39015156
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||| || |||| |||| ||||| |||||||||||| |||  ||||||||||||||    
T  39015226 atattgatttttggttcaaggaccaaactgaccattttctactttcactttggtccctgtgacacctcata 39015156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 5914913 - 5914978
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacac 249  Q
    |||||||||||| ||||||  ||  ||||||||||||||||||||||| |||||||  ||||||||    
T  5914913 gatattgatttttggttcagggactaaagtgacaattttttactttcattttagtctctgtgacac 5914978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 31091274 - 31091323
Alignment:
Q  46 attgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    ||||||| |||| ||||||||||||||||| | |||||||||||||||||    
T  31091274 attgtcagggacctaactgatagtaagtatgcgcagtcagagatctaaca 31091323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 32765165 - 32765088
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||  || ||||| ||| ||||| ||||||||||||||||  | ||||||||||||    
T  32765165 tttggggatattgatttttggttcagggaccaaagcgaccattttctactttcactttagtccctatgacacctcata 32765088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 197
Target Start/End: Original strand, 38855938 - 38856099
Alignment:
Q  37 taagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttcatcgaagaaga 136  Q
    |||||||||| ||||| |||  ||||||||||||||||| ||| ||||| || |||||||| ||| |  |  |||||| ||||| |||||| || |||||    
T  38855938 taagtgtttactgtcagggaactaactgatagtaagtatgcactgtcagggacctaacaactagtttctcgtaaccattgaacagcttcattgaggaaga 38856037  T
Q  137 tgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttcg 197  Q
    |||||   ||| ||| ||| | |||||||| ||||| | |||||||   |||||||||||||    
T  38856038 tgacccgtttcttgacgaaaagcaacacttcgttgggatgagtttgagaatattgattttcg 38856099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 31442573 - 31442489
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagca 268  Q
    |||||||||||||||||||  || ||| |||   |||||| |||||||||||||||  | ||||||||||| | |||||||||||    
T  31442573 gatattgattttcggttcagggaccaatgtgttcatttttgactttcactttagtccttatgacacctcatgcactttgtcagca 31442489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 37607454 - 37607362
Alignment:
Q  91 taacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctgag-aagaacaacactttgttggaacgagtttgg 182  Q
    ||||||||| ||||| ||||||| | |||||||||||  | |||||||||| ||||| |||| |||| |||||||| ||||  ||||||||||    
T  37607454 taacaacaaatcttcgacaaccacaaaacaacttcattaaggaagatgacccagttcttgaggaagagcaacacttagttgagacgagtttgg 37607362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 31090558 - 31090495
Alignment:
Q  22 ggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcag 85  Q
    |||||||||||| |||  ||||||| ||||| |||| ||| ||||||||||||| |||||||||    
T  31090558 ggactttagtgaaatttcgtgtttactgtcagggacctaaatgatagtaagtatgcacagtcag 31090495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 31091528 - 31091563
Alignment:
Q  304 tttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||||||||||||||||| |||||||||    
T  31091528 tttaacgtcagagactaaagtgataacggaagtgca 31091563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 39016384 - 39016419
Alignment:
Q  304 tttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||||||||||||||||| |||||||||    
T  39016384 tttaacgtcagagactaaagtgataacggaagtgca 39016419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 12011076 - 12011130
Alignment:
Q  37 taagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatct 91  Q
    |||||||||| ||||| |||| |||||||||||| |||| |||| ||||||||||    
T  12011076 taagtgtttactgtcagggacctaactgatagtatgtatgcacaatcagagatct 12011130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 24459356 - 24459426
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  | ||||||||||||    
T  24459356 atattgatttttggttcagggatcaaagtgaccattttctactttcactttggtccctatgacacctcata 24459426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 38854051 - 38854017
Alignment:
Q  168 ttggaacgagtttggagatattgattttcggttca 202  Q
    |||| ||||||||||||||||||||||||||||||    
T  38854051 ttgggacgagtttggagatattgattttcggttca 38854017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 40000237 - 40000307
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||| || ||||||||  ||||| |||||||||||| |||  | ||||||||||||    
T  40000237 atattgatttttggttcaaggaccaaagtgatcattttctactttcactttggtccctctgacacctcata 40000307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 2911382 - 2911439
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcacttt 235  Q
    |||||| ||||||||||| |||| |  || ||||||||||||||| ||||||||||||    
T  2911382 tttggaaatattgatttttggttaagagaccaaagtgacaattttctactttcacttt 2911439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 21732343 - 21732282
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtc 239  Q
    ||||| |||||| ||||| ||||||  || ||||||||| ||||| ||||||||||||||||    
T  21732343 tttggggatattaatttttggttcagggaccaaagtgaccattttctactttcactttagtc 21732282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26586003 - 26586064
Alignment:
Q  1 tctgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaac 62  Q
    ||||||||||||||   | |||||| ||||||||| |||||||||| |||||| ||||||||    
T  26586003 tctgtaagtgtttacagtcagggaccttagtgacaataagtgtttactgtcaaagacttaac 26586064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 31442900 - 31442936
Alignment:
Q  38 aagtgtttattgtcaaggacttaactgatagtaagta 74  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  31442900 aagtgtttactgtcaaggacctaactgatagtaagta 31442936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 33161901 - 33161857
Alignment:
Q  292 ttaataaaattatttaacgtcagagactaaagtgataatggaagt 336  Q
    |||| |||||||||||||||||  |||||||||||||| ||||||    
T  33161901 ttaacaaaattatttaacgtcaaggactaaagtgataacggaagt 33161857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 186 - 325
Target Start/End: Original strand, 32555430 - 32555568
Alignment:
Q  186 tattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggt 285  Q
    |||||||||||||||||  |||| ||||||||||||| ||||||||||||||||  ||||||||||||||| | |||||||||||| || |||||||  |    
T  32555430 tattgattttcggttcag-gaaccaagtgacaattttctactttcactttagtccatgtgacacctcatactccttgtcagcataaaacctttgtcatat 32555528  T
Q  286 catcttttaataaaattatttaacgtcagagactaaagtg 325  Q
    ||||  |||| | |||||||||||||| | ||||||||||    
T  32555529 catcaattaacataattatttaacgtcggggactaaagtg 32555568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 203
Target Start/End: Original strand, 28864965 - 28865166
Alignment:
Q  3 tgtaagtgtttattattagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagtc 102  Q
    ||||| |||||||| | |||||| ||||||||| |||||||||| ||||| |||| |||||||| |||||||| || || |||||| |||||| ||||||    
T  28864965 tgtaactgtttattgtcagggaccttagtgacaataagtgtttactgtcagggacgtaactgatggtaagtatgcatagacagagacctaacagcaagtc 28865064  T
Q  103 ttccacaaccatagaacaacttcatcgaagaagatgaccaagttc-ctgagaagaacaacactttgttggaacgagtttggagatattgattttcggttc 201  Q
    | || |||||| | |||||||||||||| ||||||||   |||||  | | |||| |||||||| ||||  |||||||||  |||||| |||||||| ||    
T  28865065 tcccgcaaccacaaaacaacttcatcgaggaagatgagtcagttctttaaaaagagcaacacttcgttgagacgagtttgaggatattaattttcggatc 28865164  T
Q  202 aa 203  Q
    ||    
T  28865165 aa 28865166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 348
Target Start/End: Complemental strand, 9537270 - 9537100
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    ||||| |||||||||||| | ||||  || ||||||||| ||||| ||||||||||||||||| |||||||| |||||    |||||  | ||| || |     
T  9537270 tttggggatattgatttttgattcagggatcaaagtgactattttctactttcactttagtcactgtgacacatcatatgacttgtcgtcgtaaaacatg 9537171  T
Q  278 tgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattcatga 348  Q
    || ||  |||||  |||  | |||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  9537170 tgccacatcatcacttaccataattatttaacgtcagtgactaaagtgataatggaagtgcacagtcatga 9537100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 28590105 - 28590030
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||||||| |||  ||||||| ||||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  28590105 agggactttagtgaaattttgtgtttactgtcagggacctaactgatagtaagtatgcacagtcagagacctaaca 28590030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 343
Target Start/End: Original strand, 35538207 - 35538341
Alignment:
Q  209 aaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaa 308  Q
    ||||||| |||||| ||||||||||||||||  ||||||||||||||| |||| | ||||||| |  ||||||   |||||  |||| | ||||||||||    
T  35538207 aaagtgataattttctactttcactttagtctttgtgacacctcatactctttcttagcataaaatgtttgtcgcatcatcagttaacagaattatttaa 35538306  T
Q  309 cgtcagagactaaagtgataatggaagtgcacatt 343  Q
    | | |  || ||||||||||| |||||||||||||    
T  35538307 cattaaggattaaagtgataacggaagtgcacatt 35538341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 2466520 - 2466575
Alignment:
Q  46 attgtcaaggacttaactgatagtaagtatacacagtcagagatctaacaacaagt 101  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||||| ||||    
T  2466520 attgtcaaggacataactgatagtaagtatgcacagtcagagacctaacaataagt 2466575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 4593257 - 4593182
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||||||| |||  ||||||| ||||| |||| ||||||||||||||||| ||||||||| || ||||||    
T  4593257 agggactttagtgaaatttcgtgtttactgtcagggacctaactgatagtaagtatgcacagtcagggacctaaca 4593182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 40612379 - 40612454
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||||||| |||  ||||||| ||||| |||| ||||||||||||||||| ||||||||| || ||||||    
T  40612379 agggactttagtgaaatttcgtgtttactgtcagggacctaactgatagtaagtatgcacagtcagggacctaaca 40612454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 545938 - 546008
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||| || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  545938 atattgatttttggttcaaggaccaaagtgactattttctactttcactttggtccttgtgacacctcata 546008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 2464897 - 2464820
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  2464897 tttggggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 2464820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 13651042 - 13651106
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgaca 248  Q
    |||||||||||||||||||  ||  |||||||| ||||||||||||||||||||||  |||||||    
T  13651042 gatattgattttcggttcagggactaaagtgaccattttttactttcactttagtccctgtgaca 13651106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 16611855 - 16611815
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  16611855 aattatttaacgtcagagactaaagtgataacggaagtgca 16611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 202
Target Start/End: Original strand, 23773302 - 23773446
Alignment:
Q  59 taactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaa 157  Q
    ||||| ||||||||||| ||||||||| || ||||||| |||| | || |||||| | ||||| ||||| ||  ||||||||  ||||| ||| |||||     
T  23773302 taactaatagtaagtatgcacagtcagggacctaacaataagtatcccgcaaccacaaaacaatttcattgagcaagatgacatagttcttgatgaagag 23773401  T
Q  158 caacactttgttggaacgagtttggagatattgattttcggttca 202  Q
    |||||||| ||||  |||| ||||  ||||||||||||| |||||    
T  23773402 caacacttcgttgtgacgattttgaggatattgattttcagttca 23773446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 31946934 - 31946989
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtc 239  Q
    |||||||||||||| ||||  || ||||||||| ||||||||||||||||||||||    
T  31946934 gatattgattttcgattcagggaccaaagtgaccattttttactttcactttagtc 31946989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 19186059 - 19186101
Alignment:
Q  54 ggacttaactgatagtaagtatacacagtcagagatctaacaa 96  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  19186059 ggacctaactgatagtaagtatacacagtcagggatctaacaa 19186101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 25590651 - 25590581
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  25590651 atattgatttttggttcagagaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 25590581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 32640509 - 32640443
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacct 251  Q
    ||||||||||| ||||||| || ||||||||| ||||| |||||||||||| |||  ||||||||||    
T  32640509 atattgatttttggttcaaggaccaaagtgaccattttctactttcactttggtccctgtgacacct 32640443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 8074851 - 8074778
Alignment:
Q  22 ggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||||| |||  ||||||| ||||| |||| ||||| ||||||||||| ||||||||| || ||||||    
T  8074851 ggactttagtgaaatttcgtgtttactgtcagggacctaacttatagtaagtatgcacagtcagggagctaaca 8074778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 31946878 - 31946923
Alignment:
Q  50 tcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||    
T  31946878 tcaaggacctaactgacagtaagtatacacagtcagggatctaaca 31946923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 19183183 - 19183111
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcatac 256  Q
    |||||||||||||| ||||  || |||||| || ||||||||||||||||||||||  | |||||| ||||||    
T  19183183 gatattgattttcgattcagagagcaaagtcaccattttttactttcactttagtccatatgacacgtcatac 19183111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 345
Target Start/End: Original strand, 30970543 - 30970627
Alignment:
Q  261 tgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    ||||||||||| || ||||||| ||||||  |||| | |||||||||| || || ||||||||||||||  ||| ||||||||||    
T  30970543 tgtcagcataaaacatttgtcacgtcatcggttaacagaattatttaatgttagggactaaagtgataacagaaatgcacattca 30970627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 32641466 - 32641538
Alignment:
Q  23 gactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    ||||||||||| |||  ||||||| |||||||||| ||||||||| ||||||| |||||| || || ||||||    
T  32641466 gactttagtgaaatttcgtgtttactgtcaaggacctaactgataataagtatgcacagttagggacctaaca 32641538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 2465072 - 2464997
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||||||| |||  ||||||| |||||  ||| ||||||||||||| ||| ||||||||| || ||||||    
T  2465072 agggactttagtgaaatttcgtgtttactgtcagtgacctaactgatagtaaatatgcacagtcagggacctaaca 2464997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 19186134 - 19186193
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagc 267  Q
    ||||||||| |||||||||||||||||| |||  |||||||| |||||| | ||||||||    
T  19186134 caaagtgactattttttactttcacttttgtccctgtgacacgtcatactccttgtcagc 19186193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 578653 - 578723
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    |||||||||||||||||||  || ||||||||  ||| |||||||||| |||||||  ||| |||||||||    
T  578653 gatattgattttcggttcagggaccaaagtgatcattctttactttcattttagtccatgtcacacctcat 578723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 8074671 - 8074601
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| |||||||||||| ||   ||||||||||||||    
T  8074671 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtacctgtgacacctcata 8074601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 341
Target Start/End: Original strand, 9538045 - 9538087
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgcaca 341  Q
    ||||||||||| |||||||||||| |||||| |||||||||||    
T  9538045 aattatttaacatcagagactaaaatgataacggaagtgcaca 9538087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 40611481 - 40611411
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || | ||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  40611481 atattgatttttggttcagggacccaagtgaccattttctactttcactttggtccctgtgacacctcata 40611411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 40612561 - 40612631
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || |||||| || ||||| |||||||||||| |||  ||||||||||||||    
T  40612561 atattgatttttggttcagggaccaaagtaaccattttctactttcactttggtccttgtgacacctcata 40612631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Original strand, 14891148 - 14891181
Alignment:
Q  304 tttaacgtcagagactaaagtgataatggaagtg 337  Q
    |||||||||||||||||||||||||| |||||||    
T  14891148 tttaacgtcagagactaaagtgataacggaagtg 14891181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 18004762 - 18004725
Alignment:
Q  302 tatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  18004762 tatttaacatcagagactaaagtgataacggaagtgca 18004725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 37072799 - 37072730
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    ||||||||||||||||||  ||  |||||||| ||||| |||||||| ||| |||  |||||||||||||    
T  37072799 atattgattttcggttcagggactaaagtgactattttctactttcattttggtccatgtgacacctcat 37072730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 19185976 - 19186028
Alignment:
Q  43 tttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||| ||||| |||| ||||||| |||||||||||| ||||||||| ||||||    
T  19185976 tttactgtcagggacctaactgacagtaagtatacaaagtcagagacctaaca 19186028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 19271674 - 19271734
Alignment:
Q  179 ttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtc 239  Q
    |||||||||||||||||||||| |  || |||| |||  ||||| ||||||||||||||||    
T  19271674 ttggagatattgattttcggtttagggatcaaaatgatcattttctactttcactttagtc 19271734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 282
Target Start/End: Complemental strand, 34173508 - 34173404
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    ||||| |||||||||||| ||||||  || ||||||||  ||||| |||||||| |||||||  ||||| |||| || | | ||||||||| || || ||    
T  34173508 tttggggatattgatttttggttcagagaccaaagtgatcattttctactttcagtttagtccctgtgataccttatgcaccttgtcagcacaaaacatt 34173409  T
Q  278 tgtca 282  Q
    |||||    
T  34173408 tgtca 34173404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 336
Target Start/End: Complemental strand, 40611382 - 40611350
Alignment:
Q  304 tttaacgtcagagactaaagtgataatggaagt 336  Q
    |||||||||||||||||||||||||| ||||||    
T  40611382 tttaacgtcagagactaaagtgataagggaagt 40611350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 345
Target Start/End: Original strand, 36827350 - 36827517
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttt 277  Q
    ||||| |||||||||||||| ||||  || |||| | |  ||||| || |||||||||||||  ||||| || |||  | | || ||||||||| || ||    
T  36827350 tttggggatattgattttcgattcagggaccaaaataatcattttctattttcactttagtccctgtgatacttcacgctccttctcagcataaaacatt 36827449  T
Q  278 tgtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    |||||  |||||  |||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  36827450 tgtcacatcatcacttaacaaaattatttaacatcagagactaaagtgataacggaagtgtacattca 36827517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 98 - 231
Target Start/End: Original strand, 29188185 - 29188319
Alignment:
Q  98 aagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaacaacactttgttggaacgagtttggagatattgattttc 196  Q
    ||||||||| |||||| | |||| |||||| || |||||||||| ||||| ||| ||||||||||| ||  |||| ||||||||    ||||||||||||    
T  29188185 aagtcttccgcaaccacaaaacagcttcatggaggaagatgacccagttcttgacgaagaacaacatttcattgggacgagtttaagaatattgattttc 29188284  T
Q  197 ggttcaacgaacaaagtgacaattttttactttca 231  Q
    ||||||  || ||||||||||||||| ||||||||    
T  29188285 ggttcagggatcaaagtgacaattttctactttca 29188319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 2591849 - 2591776
Alignment:
Q  182 gagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    |||||||||||||| | ||||  || ||||||| ||||||||||||||||||||||||  ||||||||||||||    
T  2591849 gagatattgatttttgcttcagggaccaaagtggcaattttttactttcactttagtccatgtgacacctcata 2591776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 345
Target Start/End: Complemental strand, 40206118 - 40205963
Alignment:
Q  190 gattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatc 289  Q
    |||||||||||||| || ||||||||| ||||| |||||||||||||| |  ||||||| ||||  | | ||||||||| || || |||| ||  ||||     
T  40206118 gattttcggttcaaggaccaaagtgaccattttatactttcactttagcccttgtgacaactcacgcaccttgtcagcacaaaacatttgccacctcatt 40206019  T
Q  290 ttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
      |||| | |||| ||||||| ||  ||||||| |||||| |||||||||||||||    
T  40206018 agttaacataattttttaacgccaatgactaaactgataacggaagtgcacattca 40205963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 55389371 - 55389441
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||||||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  55389371 atattgattttcggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 55389441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 47075340 - 47075385
Alignment:
Q  292 ttaataaaattatttaacgtcagagactaaagtgataatggaagtg 337  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||    
T  47075340 ttaacaaaattatttaacgtcagagactaaagtgataacggaagtg 47075385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 337
Target Start/End: Complemental strand, 3671247 - 3671127
Alignment:
Q  217 aattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagag 316  Q
    |||||| ||||||||||||||||   ||||||  |||||||| |||||||||||| || | |||||  |||||  |||| | |||| ||||||| ||| |    
T  3671247 aattttctactttcactttagtccccgtgacatgtcataccccttgtcagcataaaacatgtgtcacatcatcacttaacataattttttaacggcaggg 3671148  T
Q  317 actaaagtgataatggaagtg 337  Q
    | ||||||||||| |||||||    
T  3671147 attaaagtgataacggaagtg 3671127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 17701648 - 17701723
Alignment:
Q  19 tagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    ||||||||||||||| |||  ||||||| ||||| |||| ||||||||||||||||| ||||||||| || ||||||    
T  17701648 tagggactttagtga-atttcgtgtttactgtcagggacctaactgatagtaagtatgcacagtcagggacctaaca 17701723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 48573206 - 48573136
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  48573206 atattgatttttggttcatggatcaaagtgaccattttctactttcactttggtccctgtgacacctcata 48573136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 48808593 - 48808523
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  48808593 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtctctgtgacacctcata 48808523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 48809557 - 48809627
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  || ||||||||| ||||| ||||||||||||||||  | ||||||||||||    
T  48809557 atattgatttttggttcatggatcaaagtgaccattttctactttcactttagtccttctgacacctcata 48809627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 55388465 - 55388399
Alignment:
Q  19 tagggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcag 85  Q
    ||||||||||||||| |||   |||||| ||||| |||| ||||||||||||||||| |||||||||    
T  55388465 tagggactttagtgaaatttcatgtttactgtcagggacctaactgatagtaagtatgcacagtcag 55388399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 27204167 - 27204208
Alignment:
Q  304 tttaacgtcagagactaaagtgataatggaagtgcacattca 345  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  27204167 tttaacgtcagggactaaactgataatggaagtgcacattca 27204208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 48574354 - 48574431
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| |||||||| ||| ||||||| ||  |||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  48574354 tttggggatattgaattttggttcaaggactaaagtgaccattttctactttcactttggtccctgtgacacctcata 48574431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 19114660 - 19114620
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  19114660 aattatttaacgtaagagactaaagtgataacggaagtgca 19114620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 53959101 - 53959145
Alignment:
Q  304 tttaacgtcagagactaaagtgataatggaagtgcacattcatga 348  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||    
T  53959101 tttaacgtcagagactaaagtgataacggaagtgcagagtcatga 53959145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 55388287 - 55388211
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    ||||| |||||||||||| ||||||  || ||||||||| ||||| |||||||||||| |||  |||||||| ||||    
T  55388287 tttggggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacatcat 55388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 36279343 - 36279272
Alignment:
Q  24 actttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    |||||||||| |||  ||||||| | ||| |||| ||||||||||||||||| ||||||||| || ||||||    
T  36279343 actttagtgaaattttgtgtttactttcagggacctaactgatagtaagtatgcacagtcagggacctaaca 36279272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 47118040 - 47118087
Alignment:
Q  292 ttaataaaattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||| |||||||||||||||||| |||||||||||||| | |||||||    
T  47118040 ttaacaaaattatttaacgtcagggactaaagtgataacgaaagtgca 47118087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 53959002 - 53959072
Alignment:
Q  185 atattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||| ||||||  |  ||||||||||||||| |||||||||||| |||  ||||||| ||||||    
T  53959002 atattgatttttggttcaggggccaaagtgacaattttctactttcactttggtccctgtgacagctcata 53959072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 17700739 - 17700670
Alignment:
Q  186 tattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||||||||  |||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  17700739 tattgattttttgttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 17700670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 36279180 - 36279103
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| ||||||  |||| ||||||  || ||||||||| ||||| |||||||||||| |||  ||||||||||||||    
T  36279180 tttggggatatttttttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 36279103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 40206452 - 40206387
Alignment:
Q  20 agggactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcag 85  Q
    |||||| ||||| ||| |||||||||| ||| | |||| ||||||||||||||||| |||| ||||    
T  40206452 agggaccttagtaacagtaagtgtttactgttagggacctaactgatagtaagtatgcacactcag 40206387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 52318212 - 52318289
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcata 255  Q
    ||||| ||||||| |||| ||||||  || ||||||||| ||||| |||||||||||| | |  ||||||||||||||    
T  52318212 tttggggatattgttttttggttcatggaccaaagtgaccattttctactttcactttggaccttgtgacacctcata 52318289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 5839 - 5769
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcat 254  Q
    |||||||||||| ||||||  || ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  5839 gatattgatttttggttcagggatcaaagtgaccactttttactttcactttagtctatgtgacacctcat 5769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 6128 - 6185
Alignment:
Q  178 tttggagatattgattttcggttcaacgaacaaagtgacaattttttactttcacttt 235  Q
    ||||| |||||||||||| ||||||  || ||||||||| ||||||||||||||||||    
T  6128 tttggggatattgatttttggttcagggaccaaagtgaccattttttactttcacttt 6185  T

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Target: scaffold0767; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 5726 - 5688
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtg 337  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  5726 aattatttaacgccagagactaaagtgataacggaagtg 5688  T

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Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 340
Target Start/End: Complemental strand, 3193 - 3032
Alignment:
Q  180 tggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagc-ataagactttt 278  Q
    |||||||||||||||||| ||||  || |||| |||| ||||| ||||| ||||||| ||  ||||||||||||| | | |||||||| | || || |||    
T  3193 tggagatattgattttcgattcagagaccaaaatgaccattttctacttccactttaatccttgtgacacctcatgcaccttgtcagcgaaaaaacattt 3094  T
Q  279 gtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcac 340  Q
    ||||   ||||  |||| |||| | ||||||| ||||||||||| |||||| |||| |||||    
T  3093 gtcaccccatcaattaacaaaagtttttaacgccagagactaaactgataacggaaatgcac 3032  T

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Target: scaffold0237; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 340
Target Start/End: Complemental strand, 1931 - 1771
Alignment:
Q  180 tggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttg 279  Q
    |||||||||||||||||| ||||  || |||| |||| ||||| ||||| |||||||||   || |||||||||| | | ||||||||| || || || |    
T  1931 tggagatattgattttcgattcagagaccaaaatgactattttctacttccactttagttcttgcgacacctcatgcaccttgtcagcaaaaaacattcg 1832  T
Q  280 tcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcac 340  Q
    |||   ||||  |||| |||| | ||||||| ||||||||||| ||||||  |||||||||    
T  1831 tcaccccatcaattaacaaaagtttttaacgccagagactaaactgataacagaagtgcac 1771  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 340
Target Start/End: Complemental strand, 29856991 - 29856830
Alignment:
Q  180 tggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagc-ataagactttt 278  Q
    |||||||||||||||||| ||||  || |||| |||| ||||| ||||| ||||||| ||  ||||||||||||| | | |||||||| | || || |||    
T  29856991 tggagatattgattttcgattcagagaccaaaatgaccattttctacttccactttaatccttgtgacacctcatgcaccttgtcagcgaaaaaacattt 29856892  T
Q  279 gtcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcac 340  Q
    ||||   ||||  |||| |||| | ||||||| ||||||||||| |||||| |||| |||||    
T  29856891 gtcaccccatcaattaacaaaagtttttaacgccagagactaaactgataacggaaatgcac 29856830  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 6752653 - 6752701
Alignment:
Q  295 ataaaattatttaacgtcagagactaaagtgataatggaagtgcacatt 343  Q
    ||||||||||||||||||||||||||||||||||| |||| || |||||    
T  6752653 ataaaattatttaacgtcagagactaaagtgataacggaaatgaacatt 6752701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 340
Target Start/End: Complemental strand, 29845726 - 29845566
Alignment:
Q  180 tggagatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttg 279  Q
    |||||||||||||||||| ||||  || |||| |||| ||||| ||||| |||||||||   || |||||||||| | | ||||||||| || || || |    
T  29845726 tggagatattgattttcgattcagagaccaaaatgactattttctacttccactttagttcttgcgacacctcatgcaccttgtcagcaaaaaacattcg 29845627  T
Q  280 tcaggtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcac 340  Q
    |||   ||||  |||| |||| | ||||||| ||||||||||| ||||||  |||||||||    
T  29845626 tcaccccatcaattaacaaaagtttttaacgccagagactaaactgataacagaagtgcac 29845566  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 345
Target Start/End: Complemental strand, 5265406 - 5265280
Alignment:
Q  218 attttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtcagaga 317  Q
    ||||||||||||||||||| ||  ||||||||||||| | | |||| |||| || || |||||||  |||||  |||| | |  | ||||||||||| ||    
T  5265406 attttttactttcactttactccatgtgacacctcatgcaccttgttagcacaaaacatttgtcacctcatcaattaacagatgtttttaacgtcag-ga 5265308  T
Q  318 ctaaagtgataatggaagtgcacattca 345  Q
    ||||| |||||| |||||||||||||||    
T  5265307 ctaaactgataacggaagtgcacattca 5265280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 30748232 - 30748149
Alignment:
Q  184 gatattgattttcggttcaacgaacaaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagc 267  Q
    |||||||||||| | ||||  || |||| |||| ||||||||||||||||||||||  |||||||| |||||| | ||||||||    
T  30748232 gatattgatttttgattcagggaccaaattgaccattttttactttcactttagtccctgtgacacgtcatactccttgtcagc 30748149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 31219156 - 31219194
Alignment:
Q  299 aattatttaacgtcagagactaaagtgataatggaagtg 337  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  31219156 aattatttaacgtcagagactaaagtgataacggaagtg 31219194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 19599400 - 19599343
Alignment:
Q  23 gactttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacaca 80  Q
    ||||||||||||| |||||||||||| ||| |||| |||||||||||| |||| ||||    
T  19599400 gactttagtgacaataagtgtttattatcatggacgtaactgatagtaggtattcaca 19599343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 346
Target Start/End: Original strand, 19600149 - 19600286
Alignment:
Q  208 caaagtgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattattta 307  Q
    ||||||||| ||||| ||||||||||||||||  |||||||  |||| | | |||||| || || || |||||||  |||||  |||||||| || || |    
T  19600149 caaagtgaccattttctactttcactttagtccctgtgacatttcatgcaccttgtcaccacaaaacatttgtcacctcatcaattaataaagtt-ttga 19600247  T
Q  308 acgtcagagactaaagtgataatggaagtgcacattcat 346  Q
    ||||||  || |||| | |||| ||||||||||||||||    
T  19600248 acgtcaaggattaaacttataacggaagtgcacattcat 19600286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 30748383 - 30748315
Alignment:
Q  27 ttagtgacattaagtgtttattgtcaaggacttaactgatagtaagtatacacagtcagagatctaaca 95  Q
    ||||||| |||  ||||||| ||||| |||| ||||| | ||||||||||||||||||| || ||||||    
T  30748383 ttagtgaaatttcgtgtttactgtcagggacctaactaacagtaagtatacacagtcagggacctaaca 30748315  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 345
Target Start/End: Complemental strand, 142454 - 142323
Alignment:
Q  213 tgacaattttttactttcactttagtcagtgtgacacctcataccctttgtcagcataagacttttgtcaggtcatcttttaataaaattatttaacgtc 312  Q
    |||||||||| || ||||| |||||||  ||||||||||||||| | || | | ||||| || |||| || ||| ||  |||| |||||||| ||| |||    
T  142454 tgacaattttcta-tttcattttagtctttgtgacacctcatactccttataatcataaaacatttgccacgtcttcaattaacaaaattatataatgtc 142356  T
Q  313 agagactaaagtgataatggaagtgcacattca 345  Q
    ||| |||||| ||||||  ||||||||||||||    
T  142355 agatactaaaatgataacagaagtgcacattca 142323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 142624 - 142485
Alignment:
Q  59 taactgatagtaagtatacacagtcagagatctaacaacaagtcttccacaaccatagaacaacttcatcgaagaagatgaccaagttcctga-gaagaa 157  Q
    ||||||||||||||||| || |||  | || |||||| ||||||| |  | |||| | ||||||||||| ||  |||| |||  | ||| ||| |||||     
T  142624 taactgatagtaagtatgcatagttggtgacctaacatcaagtctcctgcgaccacataacaacttcattgagaaagacgacacaattcttgacgaagag 142525  T
Q  158 caacactttgttggaacgagtttggagatattgattttcgg 198  Q
    ||||| |||||| | ||||||||||||||||||||||||||    
T  142524 caaca-tttgtttggacgagtttggagatattgattttcgg 142485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 79672 - 79719
Alignment:
Q  292 ttaataaaattatttaacgtcagagactaaagtgataatggaagtgca 339  Q
    |||||||||||||||||||||| |||||||| ||||||| ||| ||||    
T  79672 ttaataaaattatttaacgtcaaagactaaaatgataatagaaatgca 79719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 79207 - 79171
Alignment:
Q  292 ttaataaaattatttaacgtcagagactaaagtgata 328  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  79207 ttaacaaaattatttaacgtcaaagactaaagtgata 79171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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