View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17275_low_25 (Length: 328)

Name: NF17275_low_25
Description: NF17275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17275_low_25
NF17275_low_25
[»] chr2 (46 HSPs)
chr2 (87-313)||(17330085-17330311)
chr2 (94-314)||(7073680-7073901)
chr2 (76-313)||(14704048-14704280)
chr2 (87-312)||(32764981-32765194)
chr2 (110-313)||(2910142-2910334)
chr2 (87-313)||(31091393-31091608)
chr2 (87-313)||(40000201-40000415)
chr2 (104-299)||(17466692-17466895)
chr2 (95-281)||(33161841-33162037)
chr2 (91-295)||(7412152-7412365)
chr2 (95-195)||(43380736-43380836)
chr2 (88-313)||(31090206-31090413)
chr2 (234-313)||(32766241-32766320)
chr2 (122-299)||(17466097-17466283)
chr2 (87-299)||(39015061-39015262)
chr2 (110-299)||(39016272-39016446)
chr2 (87-313)||(24458102-24458317)
chr2 (104-192)||(31442503-31442591)
chr2 (104-178)||(21732281-21732355)
chr2 (87-196)||(24459320-24459429)
chr2 (87-186)||(5914878-5914977)
chr2 (104-295)||(21733634-21733834)
chr2 (210-310)||(34037651-34037751)
chr2 (87-293)||(2911353-2911552)
chr2 (234-313)||(24459448-24459527)
chr2 (104-203)||(43381054-43381153)
chr2 (210-299)||(31814322-31814411)
chr2 (104-178)||(12010225-12010299)
chr2 (104-186)||(12396163-12396245)
chr2 (120-268)||(34582549-34582706)
chr2 (104-274)||(38984853-38985031)
chr2 (76-274)||(33163293-33163500)
chr2 (121-193)||(37607273-37607345)
chr2 (90-192)||(31443094-31443196)
chr2 (104-174)||(9615577-9615646)
chr2 (214-268)||(37607189-37607243)
chr2 (218-299)||(5914978-5915059)
chr2 (121-193)||(14887378-14887450)
chr2 (122-177)||(18676704-18676759)
chr2 (116-266)||(26585167-26585323)
chr2 (151-193)||(12746111-12746153)
chr2 (234-295)||(26586297-26586358)
chr2 (112-193)||(34037544-34037625)
chr2 (218-274)||(5914385-5914441)
chr2 (104-192)||(12003739-12003827)
chr2 (144-192)||(28864714-28864762)
[»] chr7 (59 HSPs)
chr7 (94-314)||(43457498-43457717)
chr7 (87-313)||(7258317-7258532)
chr7 (87-274)||(43461583-43461770)
chr7 (104-313)||(44334333-44334530)
chr7 (104-313)||(12223562-12223780)
chr7 (95-298)||(10898947-10899139)
chr7 (95-313)||(48788546-48788753)
chr7 (87-301)||(7509318-7509540)
chr7 (87-313)||(44333181-44333394)
chr7 (104-301)||(7259568-7259753)
chr7 (110-313)||(48647332-48647524)
chr7 (87-313)||(35727741-35727955)
chr7 (87-313)||(48646091-48646305)
chr7 (104-310)||(32793216-32793431)
chr7 (95-314)||(42477422-42477629)
chr7 (76-313)||(30924857-30925089)
chr7 (115-299)||(44530511-44530678)
chr7 (87-299)||(45584363-45584563)
chr7 (104-189)||(2677091-2677176)
chr7 (108-201)||(33607381-33607474)
chr7 (110-297)||(35728975-35729151)
chr7 (104-310)||(5929992-5930210)
chr7 (110-295)||(8048653-8048847)
chr7 (210-299)||(13578299-13578387)
chr7 (86-266)||(33060899-33061079)
chr7 (104-313)||(44529070-44529269)
chr7 (115-186)||(8375497-8375568)
chr7 (218-313)||(8375569-8375664)
chr7 (119-193)||(24287651-24287725)
chr7 (104-186)||(24934955-24935037)
chr7 (87-313)||(48777298-48777514)
chr7 (210-295)||(12220083-12220167)
chr7 (104-196)||(10894491-10894582)
chr7 (234-310)||(33607625-33607701)
chr7 (76-178)||(6680361-6680470)
chr7 (94-192)||(385503-385600)
chr7 (207-301)||(25621696-25621790)
chr7 (248-310)||(46286548-46286610)
chr7 (104-173)||(42478153-42478222)
chr7 (92-192)||(384991-385090)
chr7 (210-310)||(19433912-19434012)
chr7 (204-272)||(34888895-34888963)
chr7 (120-186)||(8375057-8375123)
chr7 (92-186)||(24935564-24935657)
chr7 (104-195)||(39708278-39708369)
chr7 (256-313)||(10894392-10894449)
chr7 (125-186)||(22621305-22621366)
chr7 (87-159)||(12221486-12221558)
chr7 (104-259)||(34707697-34707860)
chr7 (104-186)||(39824307-39824386)
chr7 (234-313)||(8374956-8375035)
chr7 (221-268)||(8879532-8879579)
chr7 (107-178)||(19433801-19433871)
chr7 (95-186)||(34710257-34710348)
chr7 (210-273)||(39708185-39708248)
chr7 (104-154)||(45583783-45583834)
chr7 (247-313)||(45583726-45583792)
chr7 (207-268)||(8871004-8871065)
chr7 (109-178)||(46287273-46287341)
[»] chr1 (45 HSPs)
chr1 (87-295)||(6612479-6612687)
chr1 (73-313)||(9340877-9341106)
chr1 (76-299)||(22856736-22856966)
chr1 (76-299)||(6613822-6614046)
chr1 (76-313)||(9339688-9339921)
chr1 (76-313)||(32665617-32665851)
chr1 (88-274)||(22857426-22857621)
chr1 (114-313)||(7945447-7945635)
chr1 (104-195)||(25038050-25038141)
chr1 (104-195)||(25043262-25043353)
chr1 (104-281)||(51450075-51450260)
chr1 (104-295)||(3117709-3117909)
chr1 (87-313)||(52440426-52440640)
chr1 (104-313)||(7944197-7944395)
chr1 (213-313)||(10333028-10333128)
chr1 (76-229)||(34085649-34085810)
chr1 (121-266)||(534428-534573)
chr1 (208-313)||(10333162-10333267)
chr1 (95-192)||(11830061-11830158)
chr1 (121-268)||(1407727-1407871)
chr1 (108-192)||(16249815-16249899)
chr1 (87-272)||(32664587-32664759)
chr1 (87-186)||(52439619-52439718)
chr1 (120-193)||(8975330-8975403)
chr1 (87-186)||(5782552-5782651)
chr1 (104-295)||(34088332-34088532)
chr1 (115-186)||(1001329-1001400)
chr1 (218-313)||(5782456-5782551)
chr1 (214-301)||(50107185-50107272)
chr1 (210-271)||(52439559-52439620)
chr1 (92-192)||(26518261-26518361)
chr1 (104-192)||(39977504-39977592)
chr1 (210-260)||(33342511-33342561)
chr1 (218-299)||(5783095-5783176)
chr1 (122-194)||(44720728-44720800)
chr1 (110-177)||(39726556-39726622)
chr1 (209-267)||(11060761-11060819)
chr1 (105-178)||(39725525-39725599)
chr1 (253-295)||(44020046-44020088)
chr1 (213-310)||(8975204-8975301)
chr1 (116-193)||(11059787-11059864)
chr1 (73-106)||(22857395-22857428)
chr1 (207-304)||(44719401-44719498)
chr1 (120-193)||(50107082-50107155)
chr1 (120-176)||(29766111-29766167)
[»] chr4 (40 HSPs)
chr4 (104-295)||(19050298-19050496)
chr4 (104-313)||(42278091-42278289)
chr4 (104-313)||(4703080-4703298)
chr4 (95-313)||(47878358-47878565)
chr4 (94-304)||(20599759-20599977)
chr4 (104-313)||(47874606-47874803)
chr4 (210-294)||(50694810-50694894)
chr4 (115-273)||(39869002-39869169)
chr4 (109-295)||(26172808-26173005)
chr4 (104-186)||(4701941-4702023)
chr4 (218-313)||(53771035-53771130)
chr4 (104-186)||(42391769-42391851)
chr4 (125-186)||(48739944-48740005)
chr4 (210-309)||(21621869-21621968)
chr4 (125-307)||(21623001-21623192)
chr4 (213-295)||(4701825-4701907)
chr4 (104-186)||(26685327-26685409)
chr4 (218-272)||(48740006-48740060)
chr4 (210-295)||(26170700-26170785)
chr4 (104-203)||(39870537-39870636)
chr4 (104-172)||(53770953-53771021)
chr4 (221-268)||(32244677-32244724)
chr4 (218-313)||(53770375-53770470)
chr4 (147-273)||(31844870-31844996)
chr4 (115-203)||(44158665-44158753)
chr4 (87-196)||(54574573-54574682)
chr4 (218-274)||(26685408-26685464)
chr4 (234-313)||(54574467-54574546)
chr4 (120-186)||(21622001-21622067)
chr4 (214-268)||(32244361-32244415)
chr4 (249-299)||(54574822-54574872)
chr4 (207-268)||(24753536-24753597)
chr4 (236-313)||(31844764-31844841)
chr4 (121-186)||(32244452-32244517)
chr4 (104-192)||(38216618-38216704)
chr4 (122-186)||(2786401-2786465)
chr4 (234-294)||(6039182-6039242)
chr4 (120-192)||(24745954-24746026)
chr4 (156-192)||(25810348-25810384)
chr4 (234-310)||(25810415-25810491)
[»] chr8 (40 HSPs)
chr8 (87-313)||(32898311-32898526)
chr8 (87-309)||(35178671-35178881)
chr8 (87-313)||(35177437-35177651)
chr8 (76-297)||(1952818-1953035)
chr8 (87-301)||(5736896-5737119)
chr8 (87-203)||(28619398-28619514)
chr8 (76-281)||(10406280-10406474)
chr8 (104-274)||(5737886-5738065)
chr8 (88-297)||(10407451-10407649)
chr8 (87-203)||(32564355-32564471)
chr8 (210-308)||(5965420-5965518)
chr8 (122-299)||(41754687-41754862)
chr8 (120-268)||(28524845-28525002)
chr8 (114-310)||(45476207-45476412)
chr8 (104-203)||(41121266-41121365)
chr8 (104-282)||(45476426-45476613)
chr8 (104-192)||(8569560-8569648)
chr8 (79-203)||(30134727-30134851)
chr8 (95-195)||(41122616-41122716)
chr8 (121-227)||(41754105-41754211)
chr8 (104-193)||(39138527-39138616)
chr8 (210-274)||(28619070-28619134)
chr8 (111-186)||(12637631-12637706)
chr8 (121-193)||(9626341-9626413)
chr8 (120-193)||(24199101-24199175)
chr8 (105-192)||(2552186-2552272)
chr8 (122-204)||(28526425-28526507)
chr8 (104-174)||(32563766-32563836)
chr8 (115-193)||(33315029-33315107)
chr8 (121-174)||(9625380-9625433)
chr8 (122-178)||(28005529-28005586)
chr8 (122-178)||(28062832-28062889)
chr8 (223-308)||(28619536-28619621)
chr8 (207-268)||(31074081-31074142)
chr8 (256-313)||(41754040-41754097)
chr8 (234-310)||(12637760-12637836)
chr8 (120-184)||(28006475-28006539)
chr8 (213-265)||(28006576-28006628)
chr8 (120-184)||(28063778-28063842)
chr8 (213-265)||(28063879-28063931)
[»] chr3 (51 HSPs)
chr3 (87-313)||(36280183-36280398)
chr3 (95-313)||(2591669-2591875)
chr3 (104-313)||(36278994-36279192)
chr3 (95-313)||(48573027-48573234)
chr3 (87-311)||(48574325-48574538)
chr3 (87-313)||(53958966-53959181)
chr3 (87-294)||(55389335-55389531)
chr3 (76-313)||(52318165-52318398)
chr3 (95-275)||(48809529-48809697)
chr3 (76-195)||(53957822-53957941)
chr3 (207-313)||(50753859-50753965)
chr3 (95-313)||(17700560-17700768)
chr3 (231-313)||(11773050-11773132)
chr3 (76-312)||(48808409-48808647)
chr3 (234-312)||(17701921-17701999)
chr3 (108-186)||(33427889-33427967)
chr3 (210-312)||(55388116-55388218)
chr3 (218-299)||(47118037-47118118)
chr3 (110-186)||(19115056-19115132)
chr3 (104-295)||(20464129-20464329)
chr3 (218-313)||(45600925-45601019)
chr3 (87-186)||(55388217-55388316)
chr3 (101-203)||(612375-612477)
chr3 (104-186)||(47428466-47428548)
chr3 (104-186)||(19114671-19114752)
chr3 (76-174)||(33837333-33837431)
chr3 (210-299)||(3671094-3671183)
chr3 (210-299)||(36827453-36827542)
chr3 (218-313)||(49261523-49261615)
chr3 (234-310)||(34263850-34263926)
chr3 (107-186)||(47117958-47118036)
chr3 (239-313)||(2592014-2592088)
chr3 (104-182)||(45599046-45599124)
chr3 (105-186)||(33428339-33428420)
chr3 (104-173)||(45600842-45600911)
chr3 (218-275)||(47075337-47075394)
chr3 (108-176)||(47075258-47075326)
chr3 (209-312)||(52317022-52317125)
chr3 (94-184)||(36827328-36827418)
chr3 (218-313)||(19115133-19115227)
chr3 (120-186)||(49261456-49261522)
chr3 (221-310)||(19114578-19114667)
chr3 (104-176)||(47074828-47074900)
chr3 (128-191)||(40206055-40206118)
chr3 (242-272)||(45598988-45599018)
chr3 (104-177)||(3694003-3694076)
chr3 (246-313)||(33427794-33427860)
chr3 (244-313)||(33428447-33428516)
chr3 (104-177)||(40317937-40318010)
chr3 (123-171)||(47428008-47428056)
chr3 (218-274)||(47428549-47428605)
[»] chr5 (40 HSPs)
chr5 (77-281)||(14891003-14891196)
chr5 (87-313)||(25590473-25590687)
chr5 (87-312)||(2464712-2464926)
chr5 (87-313)||(28590978-28591195)
chr5 (110-313)||(545925-546117)
chr5 (111-313)||(4592903-4593093)
chr5 (87-313)||(8074493-8074707)
chr5 (87-312)||(8075699-8075913)
chr5 (87-313)||(32640330-32640545)
chr5 (87-301)||(2466639-2466843)
chr5 (110-311)||(32641616-32641805)
chr5 (106-192)||(578637-578723)
chr5 (87-275)||(40612525-40612702)
chr5 (104-299)||(16979048-16979252)
chr5 (125-313)||(19186114-19186301)
chr5 (104-274)||(9537103-9537282)
chr5 (87-196)||(40611408-40611517)
chr5 (121-313)||(19182992-19183184)
chr5 (87-312)||(544691-544905)
chr5 (94-299)||(4593974-4594166)
chr5 (121-187)||(13651041-13651107)
chr5 (87-184)||(34173440-34173537)
chr5 (137-312)||(9537945-9538129)
chr5 (104-297)||(18004696-18004898)
chr5 (105-196)||(14889917-14890008)
chr5 (218-313)||(16611770-16611865)
chr5 (121-294)||(31946933-31947099)
chr5 (120-177)||(16611875-16611932)
chr5 (104-196)||(28589847-28589939)
chr5 (108-186)||(12445284-12445362)
chr5 (123-192)||(37072730-37072799)
chr5 (207-299)||(21069345-21069437)
chr5 (104-203)||(18400339-18400438)
chr5 (246-282)||(14881020-14881056)
chr5 (104-180)||(19271661-19271737)
chr5 (249-312)||(13483063-13483126)
chr5 (104-178)||(19271528-19271603)
chr5 (156-193)||(32555461-32555498)
chr5 (76-105)||(40612499-40612528)
chr5 (250-294)||(13483174-13483218)
[»] chr6 (12 HSPs)
chr6 (87-281)||(31239833-31240036)
chr6 (121-313)||(30748041-30748233)
chr6 (210-313)||(23507990-23508093)
chr6 (93-192)||(19600097-19600195)
chr6 (234-313)||(31218997-31219076)
chr6 (123-183)||(6468733-6468793)
chr6 (139-183)||(31219098-31219142)
chr6 (129-259)||(10855902-10856036)
chr6 (234-313)||(31219162-31219241)
chr6 (151-192)||(5265370-5265411)
chr6 (214-263)||(6752643-6752692)
chr6 (211-276)||(24940477-24940542)
[»] scaffold0039 (2 HSPs)
scaffold0039 (87-313)||(79115-79350)
scaffold0039 (210-295)||(79661-79746)
[»] scaffold0767 (2 HSPs)
scaffold0767 (76-299)||(5655-5885)
scaffold0767 (87-203)||(6099-6212)
[»] scaffold0034 (1 HSPs)
scaffold0034 (240-313)||(116097-116170)
[»] scaffold0369 (1 HSPs)
scaffold0369 (104-192)||(8672-8759)
[»] scaffold0016 (1 HSPs)
scaffold0016 (104-169)||(36408-36473)


Alignment Details
Target: chr2 (Bit Score: 143; Significance: 4e-75; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 17330085 - 17330311
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||||   |||||||||||||||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||||||||  |||||||    
T  17330085 atttagggatttaatgatttgagattcaatttagggatattgattttgggttcagggaccaaagtgaccattttttactttcactttagtctctgtgaca 17330184  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||| ||| ||||| || ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||     
T  17330185 cctcatatgtcatatcactgtgtcacatcatcacttaacagaataacttaacgtcatggactaaagtgataacggaaatgcagagtcagagacttatttg 17330284  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| | |||||||||||    
T  17330285 tatttaatcctgagtcagggacctatg 17330311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 94 - 314
Target Start/End: Complemental strand, 7073901 - 7073680
Alignment:
Q  94 gatttaagattttgagattcaatttagggatattga-tttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    ||||||||  |||||||||||||||||| ||||||| ||||||||||| |||| ||||||||||||||||| |||| ||||||||| ||||||| || ||    
T  7073901 gatttaaggatttgagattcaatttaggaatattgaatttttggttcagggaccaaagtgatcattttttattttcgctttagtccctgtgacacctaat 7073802  T
Q  193 atgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatattta 292  Q
    ||||||||| ||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||    
T  7073801 atgccatgtaactgtgtcacatcatcacttaacagaataacttaacgtcagggactaaagtgataacggaagtgcagaatcagagacttatttgtattta 7073702  T
Q  293 atcctgaattagggacctatgc 314  Q
    |||| |||| || |||||||||    
T  7073701 atcccgaatcagagacctatgc 7073680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 313
Target Start/End: Complemental strand, 14704280 - 14704048
Alignment:
Q  76 aattagatgatatttagggatttaagattt-------tgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttc 168  Q
    |||||||||| ||||| |||||||||||||       ||| ||||||||| |||||||||||||||||||||||||| |||||||  ||||| |||||||    
T  14704280 aattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgatttttggttcatggaccaaagtgactattttctactttc 14704181  T
Q  169 actttagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||| |||| ||||||| |||||||||           |||||||||||||||||| | ||   |||||||||||||||||||||||||||||||||||    
T  14704180 actttggtccctgtgacacctcatatgc-----------gccacatcatcacttaac-atattttttaacgtcagggactaaagtgataacggaagtgca 14704093  T
Q  269 gagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||| || |||||| || ||||||||||||| | |||||||||||    
T  14704092 gagtgagggacttatttgtatttaatcctgagtcagggacctatg 14704048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 87 - 312
Target Start/End: Complemental strand, 32765194 - 32764981
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| |  ||||| ||||||||| ||||||||||||||||||||| |||| |||| || |||||| ||||||||||||||||| | |||||    
T  32765194 atttagggatttagggatttgatattcaatttggggatattgatttttggttcagggaccaaagcgaccattttctactttcactttagtccctatgaca 32765095  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           |||||||||||||||||| | ||   ||||||||||||| |||||||||||||||||||||||||||| |||||| ||     
T  32765094 cctcatatgc-----------gccacatcatcacttaac-atattttttaacgtcagggattaaagtgataacggaagtgcagagtcagggacttatttg 32765007  T
Q  287 tatttaatcctgaattagggacctat 312  Q
    ||||||||||||| | || |||||||    
T  32765006 tatttaatcctgagtcagagacctat 32764981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 110 - 313
Target Start/End: Complemental strand, 2910334 - 2910142
Alignment:
Q  110 attcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgc 209  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||  ||||||| ||| |||| ||||| | |||||||||           ||    
T  2910334 attcaatttggggatattgatttttggttcatggaccaaagtgatcattttcgactttcattttggtccttgtgatacctcatatgc-----------gc 2910246  T
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacc 309  Q
    ||||||||||||||||| | |   |||||||||||||||||||||| || ||||||||||||||||||||||| || |||||||||| || | ||||| |    
T  2910245 cacatcatcacttaacagatttttttaacgtcagggactaaagtgacaaaggaagtgcagagtcagagacttatttgtatttaatcccgagtcagggatc 2910146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 31091393 - 31091608
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||| | || ||||||||||||||||||  ||| ||||||| |||||| |||||||||||| |||  |||||||    
T  31091393 atttaaggatttaggaatttgatattcaatctcggaatattgatttttggttcaaagaccaaagtgaccattttctactttcactttggtctctgtgaca 31091492  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||            |||||||||||||||||| | |   |||||||||| ||||||||||||||||||||||||||||||| |||||| ||     
T  31091493 cctcatatgca-----------ccacatcatcacttaacatatttttttaacgtcagagactaaagtgataacggaagtgcagagtcagggacttatttg 31091581  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| | |||||||||||    
T  31091582 tatttaatcctgagtcagggacctatg 31091608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 40000201 - 40000415
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| |||||||  | ||||| ||||||||| || |||||||||||||||||| |||| |||||||||||||| |||||||||||| |||| | |||||    
T  40000201 atttaaggatttagaaatttgatattcaatttgggaatattgatttttggttcaaggaccaaagtgatcattttctactttcactttggtccctctgaca 40000300  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     ||||||||      ||| |      |||||||||||||| | |  |||||||||||||| |||||||||||||||||||||| || ||||||||| ||     
T  40000301 cctcatatg------cacca------atcatcacttaacagattttcttaacgtcagggaataaagtgataacggaagtgcagggttagagacttatttg 40000388  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||| ||| ||||| |||||    
T  40000389 tatttaatcctcaatcagggatctatg 40000415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 104 - 299
Target Start/End: Original strand, 17466692 - 17466895
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||| |||||||||||||| |||||||||| | |||  ||| ||| |||||||||||||||||||||| | ||||||| |||||||||| |||||    
T  17466692 tttgaaatttaatttagggatattaatttttggtt-agggatcaaattgaccattttttactttcactttagtgcgtgtgacacctcatatgccttgtca 17466790  T
Q  204 --cta-------tgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
      |||       || ||||||||||||||||| ||| | ||||||||   |||||||||||||||||||||||||||||||||||||  || ||||||||    
T  17466791 tcctaaaacatgtgtcacatcatcacttaacagaattatttaacgtcttagactaaagtgataacggaagtgcagagtcagagacttctttgtatttaat 17466890  T
Q  295 cctga 299  Q
    |||||    
T  17466891 cctga 17466895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 95 - 281
Target Start/End: Complemental strand, 33162037 - 33161841
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    |||||||  |||||||||| |||| ||||||| ||||||||||||| ||||||||||||| ||||| |||||||| |||||||  ||||||| |||||||    
T  33162037 atttaaggatttgagattcgatttggggatatcgatttttggttcagggactaaagtgatgattttctactttcattttagtctttgtgacacctcatat 33161938  T
Q  195 gccatgtca----------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagactt 281  Q
    |||||||||           | ||  | |||||||||||||||||| | ||||||||| |||||||||||||||||||||| || |||| |||||||    
T  33161937 gccatgtcattgtaaaattttgtgttatatcatcacttaacaaaattatttaacgtcaaggactaaagtgataacggaagtacatagtctgagactt 33161841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 91 - 295
Target Start/End: Complemental strand, 7412365 - 7412152
Alignment:
Q  91 agggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctc 190  Q
    ||||||||| |  ||||||||||||||||||||||||| ||||||||| | |||  ||||||| |||||| || |||||||||||||| |||||||  ||    
T  7412365 agggatttagggatttgagattcaatttagggatattgttttttggttgagggaacaaagtgaccattttctattttcactttagtccttgtgacacatc 7412266  T
Q  191 atatgccatgtca---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagactt 281  Q
    |||||||||||||          | || ||  ||||||||||||| ||| | |||| || |||||||||||||||||||||||||||   |||| |||||    
T  7412265 atatgccatgtcatcgtaaaacatgtgtcatgtcatcacttaacataattatttaatgttagggactaaagtgataacggaagtgcactatcagtgactt 7412166  T
Q  282 aattatatttaatc 295  Q
      ||||||||||||    
T  7412165 ctttatatttaatc 7412152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 43380836 - 43380736
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    ||||| || ||||| ||||||||| ||||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||| ||||||||| |||||||    
T  43380836 atttaggaatttgaaattcaatttggggatattgatttttggttcagggaccaaagtgaccattttctactttcactttagttcatgtgacacctcatat 43380737  T
Q  195 g 195  Q
    |    
T  43380736 g 43380736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 313
Target Start/End: Complemental strand, 31090413 - 31090206
Alignment:
Q  88 tttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacat 187  Q
    ||||||||||||||  ||||| ||||||||| |||||||| |||||||||||| |||| |||| |  |||||| |||||||||||| |||| |||||       
T  31090413 tttagggatttaaggatttgatattcaatttggggatattaatttttggttcagggaccaaagcggccattttctactttcactttggtccctgtga--- 31090317  T
Q  188 ctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattat 287  Q
        |||||           | ||| ||||||||||||| | |   |||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  31090316 ----tatgc-----------gtcacctcatcacttaacatatttttttaacgtcagggactaaaatcataacggaagtgcagagtcagagacttatttat 31090232  T
Q  288 atttaatcctgaattagggacctatg 313  Q
    |||||||||||| | | |||||||||    
T  31090231 atttaatcctgagtcaaggacctatg 31090206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 32766241 - 32766320
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||||||||| | |||||||||||    
T  32766241 ttaacgtcaaggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacctatg 32766320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 299
Target Start/End: Complemental strand, 17466283 - 17466097
Alignment:
Q  122 gatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactat---------gccac 212  Q
    |||||| |||||| ||| | | || |||||||||||||| |||||| |||||| ||||||||||| |||||||||||||||| | |         |  ||    
T  17466283 gatattaatttttagtttaggaaccaaagtgatcattttctacttttactttaatccatgtgacacctcatatgccatgtcattgtaaaaccagtgttac 17466184  T
Q  213 atcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    |||||||||||||| |||   || ||||||||||||||||||| ||||||||||||||||||||||  |  || |||||||||||||    
T  17466183 atcatcacttaacataattgtttcacgtcagggactaaagtgaaaacggaagtgcagagtcagagatatctttgtatttaatcctga 17466097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 299
Target Start/End: Complemental strand, 39015262 - 39015061
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||  || ||||| ||||||||| || |||||||||||||||||| |||| ||| ||| |||||| |||||||||||| |||| |||||||    
T  39015262 atttagggattttggaatttgatattcaatttgggaatattgatttttggttcaaggaccaaactgaccattttctactttcactttggtccctgtgaca 39015163  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||            ||||||||||||||||||||     ||||||| ||  |||||| |||||| | ||||||||||||| |||| || ||     
T  39015162 cctcatatgc-----------accacatcatcacttaacaaatatttttaacgttagaaactaaaatgataatgaaagtgcagagtcaaagacgtatttg 39015074  T
Q  287 tatttaatcctga 299  Q
    |||||||||||||    
T  39015073 tatttaatcctga 39015061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 39016272 - 39016446
Alignment:
Q  110 attcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgc 209  Q
    ||||||||| || |||||||||||||||||| |||| |||||||  ||||| |||||||||||| |||||||||||| |||||||||           |     
T  39016272 attcaatttgggcatattgatttttggttcagggaccaaagtgacaattttctactttcactttggtccatgtgacacctcatatgc-----------gt 39016360  T
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
     | |||||||||||||| | |   |||||||||| ||||||||||||||||||||||||||||    |||||| || |||||||||||||    
T  39016361 aatatcatcacttaacatatttttttaacgtcagagactaaagtgataacggaagtgcagagt----gacttatttgtatttaatcctga 39016446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 24458317 - 24458102
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| |  | ||| |||||||||  ||||||||||||||| || | |||| ||||||| |||||| |||||||||||| |||| |||||||    
T  24458317 atttagggatttagggatctgatattcaatttgaggatattgatttttgattgagggaccaaagtgaccattttctactttcactttggtccctgtgaca 24458218  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||| ||||||||| | | |   ||||||| || |||||||||||||||| ||||| ||||||||| ||||| ||     
T  24458217 cctcatatgc-----------gccacattatcacttaatagatttttttaacgttagagactaaagtgataacgaaagtgtagagtcagaaacttatttg 24458129  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||  ||| | |||||||||||    
T  24458128 tatttaattttgagtcagggacctatg 24458102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 31442591 - 31442503
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||||||||||||||||||||||||||||| |||||| |||| || ||| |||||||| |||||||||||||||| | ||||| |||||    
T  31442591 tttgagattcaatttagggatattgattttcggttcagggaccaatgtgttcatttttgactttcactttagtccttatgacacctcat 31442503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 21732355 - 21732281
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtcc 178  Q
    ||||||||||||||| |||||||| |||||||||||| |||| ||||||| |||||| |||||||||||||||||    
T  21732355 tttgagattcaatttggggatattaatttttggttcagggaccaaagtgaccattttctactttcactttagtcc 21732281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 24459320 - 24459429
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || |||||||||||||||||| |||  ||||||| |||||| |||||||||||| |||| | |||||    
T  24459320 atttaaggatttacgaatttgatattcaatttgggaatattgatttttggttcagggatcaaagtgaccattttctactttcactttggtccctatgaca 24459419  T
Q  187 tctcatatgc 196  Q
     |||||||||    
T  24459420 cctcatatgc 24459429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 186
Target Start/End: Original strand, 5914878 - 5914977
Alignment:
Q  87 atttagggattta-agattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgac 185  Q
    ||||||||||||| ||||||| ||||||||  | ||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||||  ||||||    
T  5914878 atttagggatttagagatttt-agattcaagctggggatattgatttttggttcagggactaaagtgacaattttttactttcattttagtctctgtgac 5914976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 104 - 295
Target Start/End: Original strand, 21733634 - 21733834
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||||||||||||| || ||||||||||| ||||||  ||| ||||||| |||||||||||||||||||||||   ||||||  |||||  || |||||    
T  21733634 tttgagattcaatttgggaatattgattttcggttcagagaccaaagtgaccattttttactttcactttagtcatcgtgacacttcatactccttgtca 21733733  T
Q  204 ---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
              | || ||||||||||||||||| |||   |||||  ||   ||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  21733734 gcataaaacatgtgtcacatcatcacttaacagaattttttaactgcaacaactaaagtgatgacggaagtgcagagtcagagacttatttgtatttaat 21733833  T
Q  295 c 295  Q
    |    
T  21733834 c 21733834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 310
Target Start/End: Original strand, 34037651 - 34037751
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacc 309  Q
    ||||||||||||||||| |||   |||||| | || |||||||||||||| |||||||||||||| ||||||| || ||||||||||||| ||| |||||    
T  34037651 cacatcatcacttaacataattttttaacggcgggaactaaagtgataacagaagtgcagagtcatagacttatttgtatttaatcctgagttatggacc 34037750  T
Q  310 t 310  Q
    |    
T  34037751 t 34037751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 2911353 - 2911552
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| |  |||||||||||||||| |  ||| |||||||  ||||| |||||||||||| || | | |||||    
T  2911353 atttaaggatttaggaatttgatattcaatttggaaatattgatttttggttaagagaccaaagtgacaattttctactttcactttggttcctatgaca 2911452  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggacta----aagtgataacggaagtgcagagtcagagactta 282  Q
     |||||||||           |||| |||||||||||||| | |   ||||||||||||||||    ||||||||||||||||||| |||||||||||||    
T  2911453 cctcatatgc-----------gccatatcatcacttaacagatttttttaacgtcagggactaactaaagtgataacggaagtgcaaagtcagagactta 2911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 24459448 - 24459527
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||||| || ||||||||||||| | |||||||||||    
T  24459448 ttaatgtcagggactaaagtgataatagaagtgcagggtcagagacttatttgtatttaatcctgattcagggacctatg 24459527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 43381054 - 43381153
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||||||||||||||||||||||||||||  ||||| |||| ||| |||  ||||| || ||| |||||||||| ||||||| ||||||||||| ||||    
T  43381054 tttgagattcaatttagggatattgattttgtgttcagggaccaaaatgactattttctatttttactttagtccttgtgacacctcatatgccacgtca 43381153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 31814322 - 31814411
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    ||||||||||||||||| ||| | |||| |  ||||||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||    
T  31814322 cacatcatcacttaacagaattatttaatgctagggactaaagtgataacggaagtgcagagtcaaaaacttctttatatttaattctga 31814411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 12010299 - 12010225
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtcc 178  Q
    ||||| ||||||||| ||||||||||||||||||||||  || ||| ||| |||||| |||||||||||||||||    
T  12010299 tttgatattcaatttggggatattgatttttggttcatataccaaaatgaccattttctactttcactttagtcc 12010225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 12396245 - 12396163
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||| | || ||||||||||||||||||| |  |||||||||||  ||||| |||||||| ||||||||||||||||    
T  12396245 tttgagattctaattggggatattgatttttggtttagtgactaaagtgactattttctactttcattttagtccatgtgaca 12396163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 268
Target Start/End: Original strand, 34582549 - 34582706
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca---------ctatgcc 210  Q
    |||||||||||||||  |||| |||||||||||  |||||| |||||| |||||||| ||||||||| ||||||   | |||||         || ||||    
T  34582549 gggatattgattttttattcagggactaaagtggacattttctacttttactttagttcatgtgacacctcatacctcttgtcagcataaaacctttgcc 34582648  T
Q  211 acatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    |||| |||| || | | ||| | |||||||||||||||||||||||||||||||||||    
T  34582649 acatgatcagttgatataattatttaacgtcagggactaaagtgataacggaagtgca 34582706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 274
Target Start/End: Original strand, 38984853 - 38985031
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| |||||||||  ||||||| ||||||||||  |||||||||||||  ||||| |||||||||||||||| ||  ||||  ||||||| ||| |||    
T  38984853 tttgaaattcaatttttggatattaatttttggtt--tggactaaagtgacaattttctactttcactttagtctatacgacacatcatatggcatctca 38984950  T
Q  204 ctat---------gccacatcatcacttaacaaaata-acttaacgtcagggactaaagtgataacggaagtgcagagtca 274  Q
      ||         ||||||||| ||||||||| |||  | ||||||| || ||||||||||||||||||||||||||||||    
T  38984951 tcatataatttgtgccacatcaacacttaacataatttatttaacgttagtgactaaagtgataacggaagtgcagagtca 38985031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 274
Target Start/End: Original strand, 33163293 - 33163500
Alignment:
Q  76 aattagatgatatttagggattta-agattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttt-tactttcacttt 173  Q
    ||||| |||| ||||||| ||||| |||||| || ||||||||| ||||||||||||||||||||| |||| |||   | ||||||| |||||| |||||    
T  33163293 aattatatgacatttaggaatttagagattt-gaaattcaatttggggatattgatttttggttcagggaccaaa-acaacatttttctactttgacttt 33163390  T
Q  174 agtccatgtgacatctcatatgccatgtca--cta-------tgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaag 264  Q
     || | ||||||| || |||||||||||||  |||       || ||| ||||||||| ||||||| | | |||||||| |||||||||||||||||||     
T  33163391 ggtgcctgtgacaccttatatgccatgtcattctaaaacatgtgtcacttcatcacttcacaaaattaatcaacgtcagagactaaagtgataacggaaa 33163490  T
Q  265 tgcagagtca 274  Q
    |||| |||||    
T  33163491 tgcatagtca 33163500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 37607345 - 37607273
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    ||||||||||||||||||||  ||| |||||||  ||||| ||| ||||||||||||| ||||||||||||||    
T  37607345 ggatattgatttttggttcagagaccaaagtgactattttctacgttcactttagtccttgtgacatctcata 37607273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 192
Target Start/End: Original strand, 31443094 - 31443196
Alignment:
Q  90 tagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatct 189  Q
    |||||||||| || ||||||||| ||||| | |||||||||||| |||||| | || ||| |||  ||||| ||||||||||||||||  ||||||| ||    
T  31443094 tagggatttaggaatttgagatttaatttggagatattgattttcggttcaggaaccaaaatgacaattttctactttcactttagtcactgtgacacct 31443193  T
Q  190 cat 192  Q
    |||    
T  31443194 cat 31443196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 9615577 - 9615646
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcacttta 174  Q
    ||||||||| ||||||| |||||||||||| |||| | |||| || |||| ||||||||||||||||||||    
T  9615577 tttgagattgaatttagtgatattgatttt-ggtttagggacgaaggtgaccattttttactttcacttta 9615646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 37607243 - 37607189
Alignment:
Q  214 tcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    |||||| |||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  37607243 tcatcagttaacataattatataacgtcagggactaaagtgataacggaagtgca 37607189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 5914978 - 5915059
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    ||||||||| ||| | |||||||| |||| ||| ||||||||||||||||||||| || |||||  || |||||||| ||||    
T  5914978 cacttaacagaattatttaacgtcggggattaaggtgataacggaagtgcagagttagtgacttctttgtatttaattctga 5915059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 14887378 - 14887450
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    ||||||||||||||  |||| |||| | | ||| |||||| ||||||||||||||||| ||||||| ||||||    
T  14887378 ggatattgatttttaattcagggaccatattgaccattttctactttcactttagtccctgtgacacctcata 14887450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 18676704 - 18676759
Alignment:
Q  122 gatattgatttttggttcatggactaaagtgatcattttttactttcactttagtc 177  Q
    ||||||||||||| ||||| |||| ||||||| |||||| ||||||| ||||||||    
T  18676704 gatattgattttttgttcagggaccaaagtgaccattttctactttcgctttagtc 18676759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 26585323 - 26585167
Alignment:
Q  116 tttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtc-------actatg 208  Q
    |||| ||||||| ||||| |||||| |||| ||||||| ||||| | | |||||||||||||| ||||||| ||||||  || ||||       | ||||    
T  26585323 tttaaggatatttattttcggttcagggaccaaagtgaccatttct-attttcactttagtccctgtgacacctcatactccttgtcaacataaaatatg 26585225  T
Q  209 ccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtg 266  Q
     |||||||||| |||||| ||| | ||||||  || ||||||||||||||| ||||||    
T  26585224 tcacatcatcaattaacataattatttaacgctagagactaaagtgataacagaagtg 26585167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 12746111 - 12746153
Alignment:
Q  151 tgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||    
T  12746111 tgatcattttctactttcactttagtccctgtgacacctcata 12746153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 26586297 - 26586358
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatc 295  Q
    |||||| ||| |||||||||||||||||||||||| | ||| |||||   ||||||||||||    
T  26586297 ttaacgccagagactaaagtgataacggaagtgcacattcaaagactactttatatttaatc 26586358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 34037544 - 34037625
Alignment:
Q  112 tcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    |||||||  |||||||||||||||||||| | |  |||||||  ||||| |||| |||||||||||  ||||||| ||||||    
T  34037544 tcaatttgaggatattgatttttggttcaggaatcaaagtgactattttctactgtcactttagtctgtgtgacacctcata 34037625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 5914441 - 5914385
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtca 274  Q
    ||||||||| ||| | ||||||||| || ||||||||||||||| |||||| |||||    
T  5914441 cacttaacagaattatttaacgtcatggtctaaagtgataacgggagtgcaaagtca 5914385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 12003827 - 12003739
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    ||||| ||||||||| ||||||||| |||| |||| |  ||| ||| | |  ||||| || |||||||||||||| |||||||||||||    
T  12003827 tttgatattcaatttggggatattggttttcggttgagagaccaaaattactattttctattttcactttagtccctgtgacatctcat 12003739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 28864714 - 28864762
Alignment:
Q  144 actaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||||| |||||||||| || |||||||||||||||| ||||| |||||    
T  28864714 actaaaatgatcattttctattttcactttagtccatatgacacctcat 28864762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 4e-69; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 94 - 314
Target Start/End: Complemental strand, 43457717 - 43457498
Alignment:
Q  94 gatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    ||||||||  |||||||||||||||||||||||||||||||||| || |||| ||||||| |||||||||||||||||||||||  ||||||| ||||||    
T  43457717 gatttaaggatttgagattcaatttagggatattgatttttggt-cagggaccaaagtgaccattttttactttcactttagtctctgtgacacctcata 43457619  T
Q  194 tgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaa 293  Q
    |||||||| ||| || ||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||| || |||||||    
T  43457618 tgccatgtaactgtgtcacatcatcacttaacagaataacttaacgtcatgaactaaagtgataacggaagtgcagagtcggggacttatttgtatttaa 43457519  T
Q  294 tcctgaattagggacctatgc 314  Q
    |||||| | ||||||||||||    
T  43457518 tcctgagtcagggacctatgc 43457498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 7258532 - 7258317
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| |||||||    
T  7258532 atttaaggatttaggaatttgatattcaatttgggaatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgaca 7258433  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           || |||||||||||||||| | |   |||||||||||||||||||||||||| |||||||||||||||||||||| ||     
T  7258432 cctcatatgc-----------gctacatcatcacttaacagatttttttaacgtcagggactaaagtgataacagaagtgcagagtcagagacttatttg 7258344  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| |||||||||||||    
T  7258343 tatttaatcctgagttagggacctatg 7258317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 87 - 274
Target Start/End: Original strand, 43461583 - 43461770
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||| |||||| |  |||||||||||||| |||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||| |||||||||    
T  43461583 atttagtgatttagggatttgagattcaattgagggatattgatttttggttcagggatcaaagtgaccattttttactttcactttagttcatgtgaca 43461682  T
Q  187 tctcatatgccatgtcactatgcca---catcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtca 274  Q
     ||||||||||||||   | |||||   ||||||||||||  | |||||||||||||||| |||||||||||||||||||||||| |||||    
T  43461683 cctcatatgccatgt---tgtgccacatcatcatcacttagtagaataacttaacgtcagagactaaagtgataacggaagtgcatagtca 43461770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 104 - 313
Target Start/End: Original strand, 44334333 - 44334530
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| |||||||||||||||||||||||||| |||||||  ||||| |||||||||||| |||||||||||||||||||||            
T  44334333 tttgatattcaatttggggatattgatttttggttcatggaccaaagtgactattttctactttcactttggtccatgtgacatctcatatg-------- 44334424  T
Q  204 ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaatta 303  Q
       ||||||||||||||||||| | ||   |||| |||||||||||||||||||| |||||||||||||||| |||||| |||||||||||| ||| | |    
T  44334425 ---tgccacatcatcacttaac-atattttttaatgtcagggactaaagtgataatggaagtgcagagtcagggacttatttatatttaatcatgagtca 44334520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 104 - 313
Target Start/End: Original strand, 12223562 - 12223780
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||||||||||||| ||||||||||||||||||||| |||  |||||||  ||||||||||||||||||||| | ||||||| |||||||| |||||||    
T  12223562 tttgagattcaatttggggatattgatttttggttcaaggatcaaagtgacaattttttactttcactttagttcctgtgacaactcatatgtcatgtca 12223661  T
Q  204 ---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
             || || ||||||||||||||||| ||| | ||||| |||| ||||||||| ||||||||| ||||||||||| |||||  |||||||||||    
T  12223662 tcgtaaaacctgtgtcacatcatcacttaacagaattatttaacatcagtgactaaagtaataacggaactgcagagtcagggacttctttatatttaat 12223761  T
Q  295 cctgaattagggacctatg 313  Q
    ||||| | |||||||||||    
T  12223762 cctgagtcagggacctatg 12223780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 95 - 298
Target Start/End: Original strand, 10898947 - 10899139
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    ||||| || ||||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| ||||||| |||| |||| ||||||| |||||||    
T  10898947 atttaggaatttgatattcaatttgggaatattgatttttggttcaaggaccaaagtgaccattttctactttctctttggtccctgtgacacctcatat 10899046  T
Q  195 gccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
    ||           ||||||||||||||||||| | |   ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  10899047 gc-----------gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaat 10899135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 95 - 313
Target Start/End: Original strand, 48788546 - 48788753
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    ||||| || ||||| |||||||||  | |||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| ||||||| |||||||    
T  48788546 atttaggaatttgatattcaatttgtgaatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcatat 48788645  T
Q  195 gccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
    ||           ||||||||||||| ||||||| |   |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48788646 gc-----------gccacatcatcacctaacaaatttttttaacgtcagagactaaagtgataacggaagtgcagagtcagagacttatttatatttaat 48788734  T
Q  295 cctgaattagggacctatg 313  Q
      ||| | |||||||||||    
T  48788735 tatgagtcagggacctatg 48788753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 301
Target Start/End: Original strand, 7509318 - 7509540
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttt-tactttcactttagtccatgtgac 185  Q
    |||||||| |||| |  ||||||||||||||| ||||||||||||||||||| | |||| |||||||  |||||| ||||||||||||||||||| ||||    
T  7509318 atttaggggtttagggatttgagattcaatttggggatattgatttttggtttagggaccaaagtgactatttttctactttcactttagtccatatgac 7509417  T
Q  186 atctcatatgccatgtca--ctatg-----ccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagaga 278  Q
    |  |||||| ||||||||   ||||     |||||| ||||||||||||||| | ||||||||||||  |||||| |||||||||||||||| || ||||    
T  7509418 acatcatattccatgtcatcgtatgatgtaccacataatcacttaacaaaattatttaacgtcaggggttaaagtaataacggaagtgcagaatctgaga 7509517  T
Q  279 cttaattatatttaatcctgaat 301  Q
    |||  |||||||||||| |||||    
T  7509518 cttctttatatttaatcatgaat 7509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 44333394 - 44333181
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| ||||||||| || |||| |||||||    
T  44333394 atttaaggatttaggaatttgatattcaatttgggaatattgatttttggttcagggaccaaagtgaccattttctactttcacgttggtccctgtgaca 44333295  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||||||||||||||| | |   ||||||||| |||||  |||||||||||||||||||||||||||||||| ||     
T  44333294 cctcatatgc-----------gccacatcatcacttaacagatttttttaacgtcaaggact--agtgataacggaagtgcagagtcagagacttatttg 44333208  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||| ||| | |||||||||||    
T  44333207 tatttaatcatgagtcagggacctatg 44333181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 104 - 301
Target Start/End: Original strand, 7259568 - 7259753
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| |||||||| |||||||||||| |||| ||||||| |||||| || ||||||||| |||| ||||||| |||||||||           
T  7259568 tttgatattcaatttggggatattaatttttggttcagggaccaaagtgaccattttcta-tttcactttggtccttgtgacacctcatatgc------- 7259659  T
Q  204 ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaat 301  Q
        ||||||||||||||||||| | |   ||||||||||||||||||||||||||||||||| |||||||| |||||| || |||||||||||||||    
T  7259660 ----gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgaat 7259753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 110 - 313
Target Start/End: Original strand, 48647332 - 48647524
Alignment:
Q  110 attcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgc 209  Q
    ||||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| ||||||| ||||||||           ||     
T  48647332 attcaatttgggcatattgatttttggttcagggacgaaagtgaccattttctactttcactttggtccttgtgacacctcatatg-----------tgt 48647420  T
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacc 309  Q
    || |||||||||||||| | |   ||||||||||||||||||||||||||  ||||||||||| ||||||||| || ||||||||||||| | |||||||    
T  48647421 caaatcatcacttaacagatttttttaacgtcagggactaaagtgataacaaaagtgcagagtgagagacttatttgtatttaatcctgagtcagggacc 48647520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 35727955 - 35727741
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||| |||||  | ||||| ||||||||| || |||||||||||||||| | |||  ||||||| |||||| |||| ||||||| |||| |||||||    
T  35727955 atttaggaatttagaaatttgatattcaatttgggaatattgatttttggttaaaggatcaaagtgaccattttctactatcactttggtccctgtgaca 35727856  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||||||||||||||| |     ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||    
T  35727855 cctcatatgc-----------gccacatcatcacttaacagagatttttaacgtcagg-actaaagtgataacggatgtgcagagtcagagacttattta 35727768  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| | |||||||||||    
T  35727767 tatttaatcctgagtcagggacctatg 35727741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 48646305 - 48646091
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| || ||||| |||||||||||  ||||| |||||||||||| |||| ||||||| ||||||||||||||||||| |||  |||||||    
T  48646305 atttagggatttaggaatttgatattcaatttagaaatattaatttttggttcaaggac-aaagtgaccattttttactttcactttggtctctgtgaca 48646207  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     || ||||||           ||||||||||||||||| | | |   |||||| ||| |||||||||||||||||||||| |||||||| |||||| ||     
T  48646206 ccttatatgc-----------gccacatcatcacttaatatatttttttaacgacagagactaaagtgataacggaagtgtagagtcagggacttatttg 48646118  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| | |||||||||||    
T  48646117 tatttaatcctgagtcagggacctatg 48646091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 104 - 310
Target Start/End: Complemental strand, 32793431 - 32793216
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||||||||| |||||||||||| ||||||| |||| |||| ||| |||||||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  32793431 tttgagattcattttagggatattcatttttgattcagggaccaaaatgatcattttttactttcactttagtccatgtgacacctcacatgtcatgtca 32793332  T
Q  204 ---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
              | ||||||||||||| |||||| ||| | |||||| ||  ||||||||||||||| ||| |||||| |||  |||||| || ||||||||    
T  32793331 ttgtaaaacgtgtgccacatcatcagttaacataattatttaacgccaaagactaaagtgataaccgaaatgcagaatcaatgacttatttgtatttaat 32793232  T
Q  295 cctgaattagggacct 310  Q
    ||| | |||| |||||    
T  32793231 cctaagttagagacct 32793216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 95 - 314
Target Start/End: Complemental strand, 42477629 - 42477422
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    ||||| || ||||| ||||||| | || |||||  ||||||||||| |||| |||||||||||||| |||||||||||| |||| ||||||| |||||||    
T  42477629 atttaggaatttgatattcaatatgggaatattagtttttggttcagggaccaaagtgatcattttctactttcactttggtccctgtgacacctcatat 42477530  T
Q  195 gccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
    ||           ||||||||||||||||||| | |   ||||||||||||| |||| ||||||||||||||||||||||| |||||| || ||||||||    
T  42477529 gc-----------gccacatcatcacttaacatatttttttaacgtcagggattaaaatgataacggaagtgcagagtcag-gacttatttgtatttaat 42477442  T
Q  295 cctgaattagggacctatgc 314  Q
    ||||| | || |||||||||    
T  42477441 cctgagtcagagacctatgc 42477422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 76 - 313
Target Start/End: Original strand, 30924857 - 30925089
Alignment:
Q  76 aattagatgatatttagggatttaagattt-------tgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttc 168  Q
    |||||||||| ||||| |||||||||||||       ||| ||||||||| |||||||||||||||||||||| ||  ||||||| |||||| |||||||    
T  30924857 aattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgatttttggttcatagatcaaagtgaccattttctactttc 30924956  T
Q  169 actttagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    |||||  ||  ||||||| |||||||||           ||||||||||||||||||| | |   |||||||||| ||||||||| ||||||||||||||    
T  30924957 actttgatcactgtgacacctcatatgc-----------gccacatcatcacttaacagatttt-ttaacgtcagagactaaagtaataacggaagtgca 30925044  T
Q  269 gagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
     ||||||||||||| || ||||||||||||| | | |||||||||    
T  30925045 tagtcagagacttatttgtatttaatcctgagtcaaggacctatg 30925089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 115 - 299
Target Start/End: Original strand, 44530511 - 44530678
Alignment:
Q  115 atttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacat 214  Q
    |||| |||||||| |||||||||||| |||||||||||| || |||||||||||||||     |||||||||| |||||||| |  |||               
T  44530511 atttggggatattaatttttggttcagggactaaagtgaccagtttttactttcactt-----catgtgacatatcatatgcgacatca----------- 44530594  T
Q  215 catcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
     ||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44530595 -atcacttaacagaataacttaacgccaatgactaaagtgataacggaagtgcagagtcagagacttatttatatttaatcctga 44530678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 87 - 299
Target Start/End: Original strand, 45584363 - 45584563
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || ||||||||||| |||||| |||| ||||||| |||||| ||| |||||||| |||| | |||||    
T  45584363 atttaaggatttaggaatttgatattcaatttgggaatattgatttt-ggttcagggaccaaagtgaccattttctacattcactttggtccttatgaca 45584461  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||||||||||||||| | |   |||||||||||||||||||||||||||||||||||||||||  | |||| ||     
T  45584462 cctcatatgc-----------gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcattggcttatttg 45584550  T
Q  287 tatttaatcctga 299  Q
    |||||||||||||    
T  45584551 tatttaatcctga 45584563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 2677176 - 2677091
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatct 189  Q
    ||||||||| ||||||||||||||||||||| ||||| |||  |||||||||||||| ||||||||||||||||||||||||||||    
T  2677176 tttgagatttaatttagggatattgatttttagttcagggaacaaagtgatcattttctactttcactttagtccatgtgacatct 2677091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 33607381 - 33607474
Alignment:
Q  108 agattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgt 201  Q
    ||||||||||| |||||||||||||||||| || |||| ||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||    
T  33607381 agattcaatttggggatattgatttttggtccaaggaccaaagtgaccaatttttactttcactttagtccatttgacacctcatatgccatgt 33607474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 110 - 297
Target Start/End: Original strand, 35728975 - 35729151
Alignment:
Q  110 attcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgc 209  Q
    ||||||||| || |||||||||||||||||| |||| ||||||| || ||| |||||||||||| |||||| | ||| |||||||||           ||    
T  35728975 attcaatttgggaatattgatttttggttcagggaccaaagtgaccactttctactttcactttggtccatataacacctcatatgc-----------gc 35729063  T
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcct 297  Q
    ||||||||||||||||| | | | |||| ||||||||||| ||||||| ||||||||||||||||| |||||| || ||| |||||||    
T  35729064 cacatcatcacttaacagatttatttaatgtcagggactacagtgatagcggaagtgcagagtcagtgacttatttgtatgtaatcct 35729151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 104 - 310
Target Start/End: Original strand, 5929992 - 5930210
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctc----atatgccat 199  Q
    ||||||||||||||| || ||||||||||||| | || |||  ||||||||||||||| ||||||||||||||| |||||||| |||    ||||| ||     
T  5929992 tttgagattcaatttgggaatattgatttttgatccagggatcaaagtgatcatttttaactttcactttagtctatgtgacacctcatatatatgtcac 5930091  T
Q  200 gtca---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatt 290  Q
    | ||         || |||||||||||||||||||| ||| | |||| | |||||||||||||||||||||||||||| |||| || | ||  || ||||    
T  5930092 gacatcgtaaaacctgtgccacatcatcacttaacagaattatttaatggcagggactaaagtgataacggaagtgcacagtc-gaaaatttcttgtatt 5930190  T
Q  291 taatcctgaattagggacct 310  Q
    ||||||||| ||||||||||    
T  5930191 taatcctgagttagggacct 5930210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 295
Target Start/End: Original strand, 8048653 - 8048847
Alignment:
Q  110 attcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca------ 203  Q
    |||||||||  ||||||| ||||| |||||| |||| ||||||| |||||| |||||||||||||||||||||||||  |||||||  ||||||          
T  8048653 attcaatttgtggatattaattttcggttcagggaccaaagtgaccattttctactttcactttagtccatgtgacacatcatatgttatgtcatcgtat 8048752  T
Q  204 ---ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatc 295  Q
        | || ||||||||||||||| | ||| | ||||||| |  || |||||||||||||||||||||||||| |||||||  || |||||||||    
T  8048753 aacatgtgacacatcatcacttaatagaattatttaacgttaaagattaaagtgataacggaagtgcagagtcggagacttctttgtatttaatc 8048847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 13578299 - 13578387
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    ||||||||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||| |||||| || |||||||| ||||    
T  13578299 cacatcatcacttaacataattatttaacgtcagg-actaaagtgataacggaagtgcagagtcagtgacttatttgtatttaattctga 13578387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 266
Target Start/End: Complemental strand, 33061079 - 33060899
Alignment:
Q  86 tatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgac 185  Q
    |||||| ||||||| |  ||||||||||||| |||||| |||||||||| ||| | |||| |||| ||  ||||| | |||||| |||| | | ||||||    
T  33061079 tatttatggatttagggatttgagattcaatctagggaaattgatttttagtttaaggaccaaagcgacaattttctgctttcattttatttcttgtgac 33060980  T
Q  186 atctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtg 266  Q
    | ||||||  |  |||||  ||| |||||||||| |||||| ||| | |||||||||| ||||||||||||||||||||||    
T  33060979 acctcatactcattgtcagcatgtcacatcatcatttaacagaattatttaacgtcagagactaaagtgataacggaagtg 33060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 313
Target Start/End: Complemental strand, 44529269 - 44529070
Alignment:
Q  104 tttgagattcaatttagggatattgattttt----ggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccat 199  Q
    |||||||||||||||  ||||||||||||||    |||||| ||   ||||||| ||||||| |||||||||||||||| ||||||| ||||            
T  44529269 tttgagattcaatttgaggatattgatttttaattggttcaggggtcaaagtgaccattttt-actttcactttagtccttgtgacacctca-------- 44529179  T
Q  200 gtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
         |||| ||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||  ||||| |||||||| || ||||||||| |||    
T  44529178 -----tatgtcacatcatcgcttaacaaaattatttaacgtcagggactaaagtgataacagaagtgttgagtcggagacttatttgtatttaatcatga 44529084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 8375497 - 8375568
Alignment:
Q  115 atttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||||||||||||||| | |||||||||||| |||||| ||||||||||||||||  |||||||    
T  8375497 atttagggatattgatttttggtttagggactaaagtgaccattttctactttcactttagtctctgtgaca 8375568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 8375569 - 8375664
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| | ||||||||  |||||||| |||||||||||||||||||||||| ||||  || ||||||||| ||| | |||||||||||    
T  8375569 cacttaacaaaattatttaacgtcgcggactaaattgataacggaagtgcagagtcagaaacttctttgtatttaatcatgagtcagggacctatg 8375664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 24287725 - 24287651
Alignment:
Q  119 agggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    ||||||||| |||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||| ||||||    
T  24287725 agggatattcatttttggttcagggactaaagcgaccattttctactttcactttagtccctgtgacacctcata 24287651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 24935037 - 24934955
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||||||||| ||||||||||| |||| | |||  ||||||| |||||| ||||||||||||||| |||||||||    
T  24935037 tttgagattcaatttaggaatattgattttcggtttagggatcaaagtgaccattttctactttcactttagttcatgtgaca 24934955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 48777514 - 48777298
Alignment:
Q  87 atttagggatttaagattttgagattcaatttaggg-atattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgac 185  Q
    ||||||||||||| |  ||||| ||||||||| ||| ||||||||||| |||||| | |  ||||||| |||||| || ||||||||| |||| ||||||    
T  48777514 atttagggatttagggatttgaaattcaattttggggatattgatttt-ggttcaggaatcaaagtgaccattttctattttcactttggtccctgtgac 48777416  T
Q  186 atctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaa-cgtcagggactaaagtgataacggaagtgcagagtcagagacttaat 284  Q
    | |||||||||           | ||||||||||||||||| | |   |||| ||||| |||||||||||||||||||||||||||||||| || ||| |    
T  48777415 acctcatatgc-----------gtcacatcatcacttaacatatttttttaaacgtcatggactaaagtgataacggaagtgcagagtcagggaattatt 48777327  T
Q  285 tatatttaatcctgaattagggacctatg 313  Q
    | ||||||||| ||| | |||||| ||||    
T  48777326 tgtatttaatcatgagtcagggacttatg 48777298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 12220167 - 12220083
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatc 295  Q
    ||||||||||||||||||||| | ||||||||| | |||||||||||| | |||||||||||||||||||||  || |||||||||    
T  12220167 cacatcatcacttaacaaaattatttaacgtcaag-actaaagtgatatcagaagtgcagagtcagagacttctttctatttaatc 12220083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 10894582 - 10894491
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgc 196  Q
    ||||| ||||||||| ||||||| |||||||||| || |||||||||||| |||||| |||||||||||| || ||||||||| ||| |||||    
T  10894582 tttgatattcaatttggggatat-gatttttggtccagggactaaagtgaccattttctactttcactttggtgcatgtgacacctcgtatgc 10894491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 33607625 - 33607701
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacct 310  Q
    |||||||||||| ||||| |||||||||||||||||| ||||||||||  || ||||||||||||||| || |||||    
T  33607625 ttaacgtcagggtctaaaatgataacggaagtgcagaatcagagacttctttgtatttaatcctgaatcagagacct 33607701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 178
Target Start/End: Original strand, 6680361 - 6680470
Alignment:
Q  76 aattagatgatatttagggatttaagattt-------tgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttc 168  Q
    ||||||||||||||||||||||| ||||||       | | ||||||||| ||||||||||||||||||| | |||||||| |||  ||||| |||||||    
T  6680361 aattagatgatatttagggatttgagatttatgaatttaaaattcaatttggggatattgatttttggtttagggactaaaatgactattttctactttc 6680460  T
Q  169 actttagtcc 178  Q
    ||||||||||    
T  6680461 actttagtcc 6680470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 385503 - 385600
Alignment:
Q  94 gatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    ||||||||  |||||||||||| || |||||||||| ||| |||||| |||||||||||| |||||| ||||| ||||||| ||| | |||||||||||    
T  385503 gatttaaggatttgagattcaactt-gggatattgactttcggttcagggactaaagtgaccattttctacttgcactttaatccctatgacatctcat 385600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 25621696 - 25621790
Alignment:
Q  207 tgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaat 301  Q
    ||||| ||||||| |||||||||| | |||||||||| ||||||||||||||| |||||||| | ||| | ||| | || |||||||||||||||    
T  25621696 tgccaaatcatcagttaacaaaattatttaacgtcagtgactaaagtgataacagaagtgcacattcaaaaactaatttgtatttaatcctgaat 25621790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 46286610 - 46286548
Alignment:
Q  248 taaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacct 310  Q
    |||||||||||| |||||||||||||||||||||| || ||||||||||||| | ||||||||    
T  46286610 taaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagtcagggacct 46286548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 42478153 - 42478222
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcacttt 173  Q
    ||||| ||||||||  ||||||||||||||| |||||||||| ||||||| |||||| ||||||||||||    
T  42478153 tttgatattcaattaggggatattgattttttgttcatggaccaaagtgaccattttctactttcacttt 42478222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 385090 - 384991
Alignment:
Q  92 gggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctca 191  Q
    ||||||||||| ||||||||| ||||| |||||||||||||| | ||||| ||  |||||||  ||||| |||||||||||||||| | |||||| ||||    
T  385090 gggatttaagaatttgagatttaattt-gggatattgattttcgattcatagatcaaagtgacaattttctactttcactttagtcaacgtgacacctca 384992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 310
Target Start/End: Original strand, 19433912 - 19434012
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacc 309  Q
    ||||||||||||||||| ||| | |||||| ||  ||||||||||||||| ||||||| ||||| | |||||  |||||||||||||| ||| || ||||    
T  19433912 cacatcatcacttaacagaattatttaacgccatagactaaagtgataactgaagtgcggagtcggtgacttccttatatttaatcctaaatcagagacc 19434011  T
Q  310 t 310  Q
    |    
T  19434012 t 19434012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 34888895 - 34888963
Alignment:
Q  204 ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagt 272  Q
    ||||| ||| ||||||||||||| ||| | | ||||||| |||||||||||||||||||||||||||||    
T  34888895 ctatgtcacgtcatcacttaacataattattaaacgtcaaggactaaagtgataacggaagtgcagagt 34888963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 8375123 - 8375057
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||||| | |||||||  |||||||    
T  8375123 gggatattgatttttggttcatagactagagtgatcattttctacttttattttagtctctgtgaca 8375057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 24935564 - 24935657
Alignment:
Q  92 gggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||| || ||||||||||||||| | ||||| ||||||| ||||| |||  |||||||   |||||||||||||||||||||| |||||||    
T  24935564 gggatttaggaatttgagattcaatttggtgatat-gatttttagttcagggatcaaagtgacatttttttactttcactttagtccttgtgaca 24935657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 195
Target Start/End: Complemental strand, 39708369 - 39708278
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatg 195  Q
    ||||| |||||||||  | |||||||||||||||| | || | ||||||| |||||| ||||||||||  |||||||||||||  |||||||    
T  39708369 tttgaaattcaatttgagaatattgatttttggtttagggtccaaagtgaccattttctactttcactacagtccatgtgacacatcatatg 39708278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 313
Target Start/End: Complemental strand, 10894449 - 10894392
Alignment:
Q  256 taacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||||||||| | ||||||||| |||||||||||| ||| | |||||||||||    
T  10894449 taacggaagtgcagaattagagacttatttatatttaatcttgagtcagggacctatg 10894392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 22621366 - 22621305
Alignment:
Q  125 attgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||||| |   || |||||||||||||| ||||||||||||||||| |||||||    
T  22621366 attgatttttggtttagataccaaagtgatcattttctactttcactttagtccttgtgaca 22621305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 12221558 - 12221486
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattt 159  Q
    |||||||||||||  | ||||| ||||||||| ||||||||||| ||||||||| |||| ||| ||| |||||    
T  12221558 atttagggatttagaaatttgatattcaatttggggatattgatctttggttcagggaccaaattgaccattt 12221486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 259
Target Start/End: Complemental strand, 34707860 - 34707697
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| |||||| || |||||||| ||||||||| ||||||  |||||| ||||||| || |||||||||| ||| |||||||  ||| || || |||||    
T  34707860 tttgaaattcaacttggggatattaatttttggtccatggaacaaagtgttcattttctattttcactttattccctgtgacacatcaaatccc-tgtca 34707762  T
Q  204 ---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataac 259  Q
             || ||| |||| |||| |||||||||| | |||||||||| |||||||||||||||    
T  34707761 tcgtataacctgtgcaacattatcatttaacaaaattatttaacgtcagagactaaagtgataac 34707697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 39824386 - 39824307
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||||| || |||||||||| |   ||| || ||||||||| |||||| ||||||||||||||||| |||||||    
T  39824386 tttgaaattcaatttgggaatattgatttat---tcaggggctaaagtgaccattttctactttcactttagtccctgtgaca 39824307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 8375035 - 8374956
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||||||||  |||||||||||||||||||||||| | ||||| ||||  || |||||||| |||| | || ||||||||    
T  8375035 ttaacgtcaaagactaaagtgataacggaagtgcaaaatcagaaacttttttgtatttaattctgagtcagagacctatg 8374956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 8879532 - 8879579
Alignment:
Q  221 ttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    |||||||||| | |||||||||||||||||||||||||| ||| ||||    
T  8879532 ttaacaaaattatttaacgtcagggactaaagtgataacagaaatgca 8879579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 19433801 - 19433871
Alignment:
Q  107 gagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtcc 178  Q
    |||||||||||| ||||||||||||||| ||||| | || ||| ||| |||||| ||| |||||||||||||    
T  19433801 gagattcaatttggggatattgatttttagttcaggaaccaaaatgaccattttctac-ttcactttagtcc 19433871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 34710257 - 34710348
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| |||||| | |||||||||  |||| |||||||||| |||| |||  ||||| |  ||||||||||||||||||||||  |||||||    
T  34710257 atttaggattttaaaattcaatttgaggatgttgatttttgattcagggatcaaagtaacaattttttactttcactttagtctctgtgaca 34710348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 39708248 - 39708185
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtc 273  Q
    ||||| ||||| ||||| ||| | ||||| ||| ||||||||||||||||||||||||| ||||    
T  39708248 cacattatcacataacataattatttaacatcacggactaaagtgataacggaagtgcaaagtc 39708185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 45583834 - 45583783
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatgga-ctaaagtgat 154  Q
    ||||| ||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  45583834 tttgatattcaatttggggatattgatttttggttcagggacctaaagtgat 45583783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 45583792 - 45583726
Alignment:
Q  247 ctaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||||||||||||||||||||||| ||||  |||||  | |||||||| |||| | |||||||||||    
T  45583792 ctaaagtgataacggaagtgcagaatcaggaacttatctgtatttaattctgagtcagggacctatg 45583726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 8871004 - 8871065
Alignment:
Q  207 tgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||||||||| | |||||||||||| ||||  |||| ||||||||||||||| ||| ||||    
T  8871004 tgccacatcattagttaacaaaataatttaatatcagagactaaagtgataacagaaatgca 8871065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 46287273 - 46287341
Alignment:
Q  109 gattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtcc 178  Q
    ||||||||||||| ||||||||||||| || | |||||||||||| |  ||| |||||||||||| ||||    
T  46287273 gattcaatttaggaatattgatttttgatttagggactaaagtga-ctatttctactttcactttggtcc 46287341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 8e-55; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 87 - 295
Target Start/End: Complemental strand, 6612687 - 6612479
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||| ||||| |  ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||| | |||||||| |||||||    
T  6612687 atttaggaatttagggatttgagattcaatttggggatattgatttttggttcaaggacaaaagtgatcattttctactttgaatttagtccctgtgaca 6612588  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     ||||||| || |||||  ||| ||||| ||||||||||||||| | ||||||||||||| ||||||||||| ||||||||||||||||||||||  ||     
T  6612587 cctcatattccttgtcagcatgtcacataatcacttaacaaaattatttaacgtcagggattaaagtgataatggaagtgcagagtcagagacttgtttg 6612488  T
Q  287 tatttaatc 295  Q
    |||||||||    
T  6612487 tatttaatc 6612479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 313
Target Start/End: Original strand, 9340877 - 9341106
Alignment:
Q  73 gaaaattagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactt 172  Q
    ||||||||||||| ||||||||||||| || ||||| ||||| ||| || ||||||| |||||||||| |||| ||||||| |||||| |||||||||||    
T  9340877 gaaaattagatgacatttagggatttaggaatttgatattcattttgggaatattgaattttggttcagggaccaaagtgaccattttctactttcactt 9340976  T
Q  173 tagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagt 272  Q
    | |||| ||||||| |||||||||           ||||||||||||||||| | | |   |||||||||| ||||||||||||||| |||||||| |||    
T  9340977 tggtccctgtgacacctcatatgc-----------gccacatcatcacttaatagatttttttaacgtcagagactaaagtgataacagaagtgcaaagt 9341065  T
Q  273 cagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||||||||| || ||||||||||||| | |||||||||||    
T  9341066 cagagacttatttgtatttaatcctgagtcagggacctatg 9341106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 76 - 299
Target Start/End: Complemental strand, 22856966 - 22856736
Alignment:
Q  76 aattagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttag 175  Q
    |||||||||| ||| ||||||| |||  |||||||||||||||  ||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||    
T  22856966 aattagatgacattcagggattcaaggatttgagattcaatttgaggatattgaattttggttcaggaactaaagtgatcattttctactttcactttag 22856867  T
Q  176 tccatgtgacatctcatatgccatgtca---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtg 266  Q
    ||  ||||||| ||||||||||||||||          | || ||||| ||||||||||| ||| | |||||||| | ||||||||||||||||||||||    
T  22856866 tc--tgtgacacctcatatgccatgtcatcgtaaaatttgtgtcacataatcacttaacataattatttaacgtcggagactaaagtgataacggaagtg 22856769  T
Q  267 cagagtcagagacttaattatatttaatcctga 299  Q
    |||||| ||||||||  || |||||||||||||    
T  22856768 cagagttagagacttctttgtatttaatcctga 22856736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 299
Target Start/End: Original strand, 6613822 - 6614046
Alignment:
Q  76 aattagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttag 175  Q
    ||||| |||| ||||| ||||||| |  ||||||||||||||| ||||||||||||||||||||| |||  ||||| || ||||  ||||||||||||||    
T  6613822 aattatatgacatttaaggatttagggatttgagattcaatttggggatattgatttttggttcagggaacaaagtaataatttcctactttcactttag 6613921  T
Q  176 tccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcag-ggactaaagtgataacggaagtgcagagtca 274  Q
    ||| ||||| | | ||||   | |||||  ||| ||||||||||||||||||||| | |||||||| | |||||||| ||||||| ||||||||||||||    
T  6613922 tccctgtgaaaccccatactgcttgtcagcatgtcacatcatcacttaacaaaattatttaacgtcggaggactaaaatgataactgaagtgcagagtca 6614021  T
Q  275 gagacttaattatatttaatcctga 299  Q
    |||||||| || |||||||||||||    
T  6614022 gagacttatttgtatttaatcctga 6614046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 313
Target Start/End: Complemental strand, 9339921 - 9339688
Alignment:
Q  76 aattagatgatatttagggatttaagattt-------tgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttc 168  Q
    |||||||||| ||||| |||||||||||||       ||| ||||||||| |||||||||||||||||||||  ||| ||||||| |||||| |||||||    
T  9339921 aattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgatttttggttcagagaccaaagtgaccattttctactttc 9339822  T
Q  169 actttagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||| |||| |||||||||||||||||           ||||||||||||||||||| | |   |||||||||||||||||||||||||||||||||||    
T  9339821 actttggtccctgtgacatctcatatgc-----------gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgca 9339733  T
Q  269 gagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||| | || ||| || ||||||||||||| | |||||||||||    
T  9339732 gagtcggggatttatttgtatttaatcctgagtcagggacctatg 9339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 76 - 313
Target Start/End: Original strand, 32665617 - 32665851
Alignment:
Q  76 aattagatgatatttagggatttaagattt-------tgagattcaatttagggatattgatttttg-gttcatggactaaagtgatcattttttacttt 167  Q
    |||||||||| ||||| |||||||||||||       ||| ||||||||| |||||||||||||||| ||||| |||| ||||||| |||||| ||||||    
T  32665617 aattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgatttttgtgttcagggaccaaagtgaccattttctacttt 32665716  T
Q  168 cactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgc 267  Q
    |||||| |||| ||||||| |||||||||           ||||||||||||||||||| | |    ||||| |||||||||||||||||||||||||||    
T  32665717 cactttggtccttgtgacacctcatatgc-----------gccacatcatcacttaacagatttttgtaacgccagggactaaagtgataacggaagtgc 32665805  T
Q  268 agagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||| ||||||| || ||||||||| ||| | || ||||||||    
T  32665806 agagtcaaagacttatttgtatttaatcatgagtcagagacctatg 32665851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 88 - 274
Target Start/End: Original strand, 22857426 - 22857621
Alignment:
Q  88 tttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacat 187  Q
    ||||||||||||||  ||||||||||||||| || ||||||||||||||||||      |||||||  | ||| |||||||||||||||||||||||||     
T  22857426 tttagggatttaaggatttgagattcaatttgggtatattgatttttggttcagttttcaaagtgactagtttctactttcactttagtccatgtgacac 22857525  T
Q  188 ctcatatgccatgtcactat---------gccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtca 274  Q
    |||||||| ||||||| |||         | ||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||||| |||||    
T  22857526 ctcatatgtcatgtcattataaaacttgtgtcacatcatcacttaacataattatttaacgtcatggactaaagtgataacggaagtgcaaagtca 22857621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 313
Target Start/End: Original strand, 7945447 - 7945635
Alignment:
Q  114 aatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccaca 213  Q
    ||||| || |||||||||||||||| | |||| ||||||| |||||| ||||||||||||  ||| ||||||| ||||||||           |||||||    
T  7945447 aatttgggaatattgatttttggtttagggaccaaagtgaccattttctactttcactttgatccttgtgacacctcatatg-----------tgccaca 7945535  T
Q  214 tcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||||||||| || | |   ||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| | ||| |||||||    
T  7945536 tcatcacttagcatatttttttaacgtcagggactaaagtgataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaggaacctatg 7945635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 195
Target Start/End: Complemental strand, 25038141 - 25038050
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatg 195  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||||| ||||||||| ||||||||    
T  25038141 tttgagattcaatttagggatattgatttttggttcagggaccaaagtgataattttctactttcactttagttcatgtgacacctcatatg 25038050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 195
Target Start/End: Complemental strand, 25043353 - 25043262
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatg 195  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||||| ||||||||| ||||||||    
T  25043353 tttgagattcaatttagggatattgatttttggttcagggaccaaagtgataattttctactttcactttagttcatgtgacacctcatatg 25043262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 104 - 281
Target Start/End: Complemental strand, 51450260 - 51450075
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    |||||||||||| || |||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||| |||||||| |||||||    
T  51450260 tttgagattcaagttggggatatttatttttggttcatggactatagtgatcattttctactttcagtttagtccctgtgacacctcatatgacatgtca 51450161  T
Q  204 ---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagactt 281  Q
              | || ||||||| ||||||||||||| | ||||||||||  |||||| |||| ||| ||||||||||||||| ||||    
T  51450160 tcgtaaaacatgtgtcacatcaccacttaacaaaattatttaacgtcagatactaaaatgat-acgaaagtgcagagtcagaaactt 51450075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 295
Target Start/End: Complemental strand, 3117909 - 3117709
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| |||||||| |||||||||||| |||||||| |||||||||| ||||||||||||||||  ||||||| |||||||| |||| ||    
T  3117909 tttgatattcaatttggggatattaatttttggttcaaggactaaaatgatcattttctactttcactttagtcattgtgacacctcatatgtcatgcca 3117810  T
Q  204 ---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
              | || |||||||||| |||||||||| | ||||| ||||   |||||||||||||||||||| ||||||||||| ||  || ||||||||    
T  3117809 tcgtaaaacatgtgtcacatcatcaattaacaaaattatttaacttcagacgctaaagtgataacggaagtggagagtcagagatttctttgtatttaat 3117710  T
Q  295 c 295  Q
    |    
T  3117709 c 3117709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 52440426 - 52440640
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || ||| | |||||||||||| |||| |||||||  ||||| |||||||||||| | || |||||||    
T  52440426 atttaaggatttaggaatttgatattcaatttgggaatacttatttttggttcagggaccaaagtgactattttctactttcactttggcccctgtgaca 52440525  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||| ||||      ||||     ||||||||||||||| | |   ||||||||| | ||||||||||||| ||||||||||||||||||||||| |||    
T  52440526 cctcagatgc------acta-----catcatcacttaacacatttttttaacgtcaag-actaaagtgataatggaagtgcagagtcagagacttattta 52440613  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| | |||||||||||    
T  52440614 tatttaatcctgactcagggacctatg 52440640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 313
Target Start/End: Complemental strand, 7944395 - 7944197
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| |||||||||||||||||| || |||| |||||||| ||||| |||||||||||| ||| |||||||| |||||||||           
T  7944395 tttgatattcaatttggggatattgatttttggtccagggaccaaagtgataattttctactttcactttggtctatgtgacacctcatatgc------- 7944303  T
Q  204 ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaatta 303  Q
        |||| || ||||||||||| | |   ||||||| |||||||||| |||||||| |||||||||||||  |||||| || ||||||||  ||| | |    
T  7944302 ----gccatattatcacttaacatatttttttaacgttagggactaaattgataacgaaagtgcagagtcaaggacttatttgtatttaattttgagtca 7944207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 10333128 - 10333028
Alignment:
Q  213 atcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctat 312  Q
    |||||||||||||| | |   ||||||||| |||||||| |||||||||||||||||||| || |||||| |||||||||||||||||| | ||||||||    
T  10333128 atcatcacttaacagatttttttaacgtcaaggactaaaatgataacggaagtgcagagtaagggacttatttatatttaatcctgaatcaaggacctat 10333029  T
Q  313 g 313  Q
    |    
T  10333028 g 10333028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 229
Target Start/End: Complemental strand, 34085810 - 34085649
Alignment:
Q  76 aattagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttag 175  Q
    |||||||||| |||||| | |||| || ||||| ||||||||| ||||||||||||||||||||| | |  |||||||||||||| |||||||| |||||    
T  34085810 aattagatgacatttagtggtttaggaatttgaaattcaatttggggatattgatttttggttcaagcatcaaagtgatcattttctactttcattttag 34085711  T
Q  176 tccatgtgacatctcatatgccatgtca--------ctatgccacatcatcacttaacaaaa 229  Q
    ||| | || ||  ||||||||||| |||        |||||||||||| |||||||||||||    
T  34085710 tccctatgtcacatcatatgccatatcatcgtatgtctatgccacatcgtcacttaacaaaa 34085649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 266
Target Start/End: Original strand, 534428 - 534573
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcac 220  Q
    ||||||||||||| | ||| ||||  ||||||||||||||||||||||||||||||||  ||||||  |||||  || |||||   ||||||||||| ||    
T  534428 ggatattgattttcgattcgtggatcaaagtgatcattttttactttcactttagtccccgtgacacgtcatactccttgtcaacgtgccacatcataac 534527  T
Q  221 ttaacaaaataacttaacgtcagggactaaagtgataacggaagtg 266  Q
    |||||| | |   ||||||  |||||||||||||||||| ||||||    
T  534528 ttaacagatttttttaacggtagggactaaagtgataacagaagtg 534573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 10333162 - 10333267
Alignment:
Q  208 gccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattaggga 307  Q
    ||||||||||||||||||| | |   ||||||  || |||||||||||||||||||||||||||||||||||||| || ||||||||| ||| | || ||    
T  10333162 gccacatcatcacttaacagatttttttaacgctagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcagaga 10333261  T
Q  308 cctatg 313  Q
    ||||||    
T  10333262 cctatg 10333267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 11830158 - 11830061
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||||||| |||||||||||||||  |||||||||||||||||||  |||  ||| ||| |||||| ||||||||||||| ||||||||||| |||||    
T  11830158 atttaagaatttgagattcaattttaggatattgatttttggttctaggatcaaaatgaccattttctactttcactttaatccatgtgacacctcat 11830061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 268
Target Start/End: Complemental strand, 1407871 - 1407727
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcac 220  Q
    ||||||| ||||| |||||| |||| |||||||| ||||| ||||||||||||||||||||||||| ||| | || |  | ||  |  | |||||||||     
T  1407871 ggatattaattttcggttcaaggaccaaagtgataattttctactttcactttagtccatgtgacacctc-tttgtc--ggcataaaacaacatcatcag 1407775  T
Q  221 ttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    |||||||||| | ||||||||||||||||||||||||||  |||||||    
T  1407774 ttaacaaaattatttaacgtcagggactaaagtgataacataagtgca 1407727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 16249899 - 16249815
Alignment:
Q  108 agattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||| |||||| |||||||||||||| || | ||||| |||||    
T  16249899 agattcaatttagggatattgattttcggttcagggactaaaatgaccattttctactttcactttagcccctatgacagctcat 16249815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 272
Target Start/End: Complemental strand, 32664759 - 32664587
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || ||||||||||||| |||| | || |||||||  ||||| |||||||| ||| |||| | |||||    
T  32664759 atttaaggatttaggaatttgatattcaatttgggaatattgatttttgattcaag-accaaagtgactattttctactttcattttggtccctttgaca 32664661  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagt 272  Q
     |||||||||           ||||||||||||||||||||  |  |||||||||| |||||||||||||||||||||||||||||    
T  32664660 cctcatatgc-----------gccacatcatcacttaacaatttt-cttaacgtcaaggactaaagtgataacggaagtgcagagt 32664587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 52439718 - 52439619
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| || ||||| |||||||||  |||||||||||||||||| | |||  ||||||| |||||| |||||||||||| |||| |||||||    
T  52439718 atttagggatttaggaatttgatattcaatttgaggatattgatttttggtttagggatcaaagtgaccattttctactttcactttggtccttgtgaca 52439619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 8975403 - 8975330
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    |||||||||||||||||||   |||| ||||||| |||||| ||||||||||||||||| ||||||||||||||    
T  8975403 gggatattgatttttggtttcgggaccaaagtgaccattttctactttcactttagtccctgtgacatctcata 8975330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 5782651 - 5782552
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || | ||||||| |  || ||||||||||||||||||| | ||| ||||||||  |||||||| ||||||||||||||||||||||    
T  5782651 atttaaggatttaggaatgtgagattgatattggggatattgatttttggtttagggattaaagtgacaattttttagtttcactttagtccatgtgaca 5782552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 295
Target Start/End: Original strand, 34088332 - 34088532
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| |||||||||| |||| ||||| |||| |||||||    ||| ||||||||||||||||| | |||||  ||| ||| |||||||    
T  34088332 tttgaaattcaatttggggatattgaatttttgttcagggaccaaagtgacacatttctactttcactttagtccctatgacacatcaaatgtcatgtca 34088431  T
Q  204 c---------tatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
              | || | ||||||||||||||| ||| | |||| |||| ||| ||||||||||  ||||||||||||||||||||||  || ||||||||    
T  34088432 tcgtaaaacatgtgtcgcatcatcacttaacataattatttaatgtcaaggattaaagtgatagtggaagtgcagagtcagagacttctttgtatttaat 34088531  T
Q  295 c 295  Q
    |    
T  34088532 c 34088532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 1001400 - 1001329
Alignment:
Q  115 atttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||||||||| |||||| |||  ||||| |  ||||| |||||||||||||||||||||||||    
T  1001400 atttagggatattgattttcggttcaaggatcaaagtaactattttctactttcactttagtccatgtgaca 1001329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 5782551 - 5782456
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||| ||||| | |||||||||| |||||||||||||| ||||||||| | ||||||||||  || ||||||||| ||| | || ||||||||    
T  5782551 cacttaataaaattatttaacgtcagagactaaagtgataagggaagtgcataatcagagacttctttgtatttaatcatgagtcagagacctatg 5782456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 50107185 - 50107272
Alignment:
Q  214 tcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaat 301  Q
    |||||| |||||| ||| | |||||| || ||||||||||||||||||||||||| | |||||||||   || |||||||||||||||    
T  50107185 tcatcagttaacataattatttaacgccaaggactaaagtgataacggaagtgcacattcagagactattttgtatttaatcctgaat 50107272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 52439620 - 52439559
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagag 271  Q
    ||||||||||||||||| | |   |||||||||||||||||||||||||||||| |||||||    
T  52439620 cacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaaatgcagag 52439559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 26518361 - 26518261
Alignment:
Q  92 gggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctca 191  Q
    |||||||| || ||||||||||||||| | ||||||| |||| ||||||  ||| ||||||| |||||| ||| ||||||||| |  |||||||| ||||    
T  26518361 gggatttaggaatttgagattcaatttggagatattggttttcggttcagagaccaaagtgaccattttctaccttcactttaatttatgtgacacctca 26518262  T
Q  192 t 192  Q
    |    
T  26518261 t 26518261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 39977592 - 39977504
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||| ||||||||||  ||||||||||||||||||||  ||| ||||| |||||||| ||| |  |||||||||| ||||||| |||||    
T  39977592 tttgcgattcaatttgaggatattgatttttggttcagagaccaaagttatcattttctacatctactttagtccttgtgacacctcat 39977504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 260
Target Start/End: Complemental strand, 33342561 - 33342511
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacg 260  Q
    ||||||||||||||||| ||| | |||||||||| ||||||||||||||||    
T  33342561 cacatcatcacttaacataattatttaacgtcagagactaaagtgataacg 33342511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 5783095 - 5783176
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    ||||||||| ||| | ||||||  || ||||||||||||||||||||||||||||||  |||||  || |||||||| ||||    
T  5783095 cacttaacagaattatttaacgctagtgactaaagtgataacggaagtgcagagtcatggacttctttgtatttaattctga 5783176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 44720728 - 44720800
Alignment:
Q  122 gatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    |||||||||||| |||||| | || |||||||  ||||| ||||||||||||||||  ||||||| |||||||    
T  44720728 gatattgattttcggttcaagaaccaaagtgacaattttctactttcactttagtcagtgtgacacctcatat 44720800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 39726556 - 39726622
Alignment:
Q  110 attcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtc 177  Q
    ||||||||| | ||||||||||||||||||| || ||||| |||  ||||| ||||||||||||||||    
T  39726556 attcaatttggtgatattgatttttggttca-gggctaaaatgactattttctactttcactttagtc 39726622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 11060761 - 11060819
Alignment:
Q  209 ccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgc 267  Q
    |||| |||||| |||||| ||| | |||||||| |||||||||||||||||| ||||||    
T  11060761 ccacgtcatcagttaacagaattatttaacgtcggggactaaagtgataacgaaagtgc 11060819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 39725599 - 39725525
Alignment:
Q  105 ttgagattcaatttagggatattgattttt-ggttcatggactaaagtgatcattttttactttcactttagtcc 178  Q
    |||||||||| ||  | ||||||||||||| |||| | ||||| ||||||||||||| |||||||| ||||||||    
T  39725599 ttgagattcagttatgcgatattgattttttggttaagggactgaagtgatcattttctactttcattttagtcc 39725525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 44020088 - 44020046
Alignment:
Q  253 tgataacggaagtgcagagtcagagacttaattatatttaatc 295  Q
    |||||||| ||||||||||||||||||||  ||||||||||||    
T  44020088 tgataacgtaagtgcagagtcagagacttctttatatttaatc 44020046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 8975301 - 8975204
Alignment:
Q  213 atcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacct 310  Q
    ||||||| |||||||||| | |||||| ||  |||||||||||||||| ||||||| | |||  ||||   |||||||||||| ||| | ||||||||    
T  8975301 atcatcaattaacaaaattatttaacgccaaagactaaagtgataacgaaagtgcatattcatggactactttatatttaatcttgagtcagggacct 8975204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 11059864 - 11059787
Alignment:
Q  116 tttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    |||||||||||| ||||| |||| | |||  |||||||  ||||||||| | ||||||||||| ||||||| ||||||    
T  11059864 tttagggatattaattttcggttgagggatcaaagtgacaattttttacctccactttagtccctgtgacacctcata 11059787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 22857395 - 22857428
Alignment:
Q  73 gaaaattagatgatatttagggatttaagatttt 106  Q
    |||||||||||||||||||||||||| |||||||    
T  22857395 gaaaattagatgatatttagggatttgagatttt 22857428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 304
Target Start/End: Complemental strand, 44719498 - 44719401
Alignment:
Q  207 tgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattag 304  Q
    ||||||| ||||| | |||||||| | |||| | ||| ||||||| |||||||||||||||| | ||| | |||   |||||||||||||||| ||||    
T  44719498 tgccacaacatcaatgaacaaaattatttaaagacagagactaaaatgataacggaagtgcatattcataaactactttatatttaatcctgagttag 44719401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 50107082 - 50107155
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    |||||||| ||||| |||| | |||| ||||||| ||| |  ||||||||| ||||||||||||||| ||||||    
T  50107082 gggatattaattttcggttaaaggaccaaagtgaccatgtcctactttcacgttagtccatgtgacacctcata 50107155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 29766167 - 29766111
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagt 176  Q
    ||||||||||||||| ||||| |||| |||||||  ||||| || ||||||||||||    
T  29766167 gggatattgattttttgttcagggaccaaagtgacaattttctattttcactttagt 29766111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 104 - 295
Target Start/End: Complemental strand, 19050496 - 19050298
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtc- 202  Q
    |||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||     
T  19050496 tttgagattcaatttagggatattgatttttgcttcaaggaccaaagtgatcattttatactttcactttagtccatgtgacacctcatatgccatatca 19050397  T
Q  203 ------actatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatc 295  Q
          |  ||| ||||||||||||||| | ||| | |||||||| | ||||||||||||||||||||||||||||| |||||||  || |||||||||    
T  19050396 tcgtaaaacatgtcacatcatcacttaatagaattatttaacgtcggagactaaagtgataacggaagtgcagagtccgagacttctttgtatttaatc 19050298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 104 - 313
Target Start/End: Complemental strand, 42278289 - 42278091
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| ||||||| |||||| || ||||||||| |||| ||||||| |||||||||           
T  42278289 tttgatattcaatttggggatattgatttttggttcagggaccaaagtgaccattttctagtttcactttggtccctgtgacacctcatatgca------ 42278196  T
Q  204 ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaatta 303  Q
         |||||||||||||||||| | |   ||||||||||||| ||||||||||||||||||||||||||||  ||||| || |||||||||| || | |    
T  42278195 -----ccacatcatcacttaacagatttttttaacgtcagggattaaagtgataacggaagtgcagagtcaggaacttatttgtatttaatcccgagtca 42278101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 104 - 313
Target Start/End: Original strand, 4703080 - 4703298
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||||||||||||| ||||||||||||||||| ||| |||| |||||||  ||||| ||||||||||||||||||| |||||||||||||| || ||||    
T  4703080 tttgagattcaatttggggatattgatttttgggtcagggaccaaagtgacaattttatactttcactttagtccatatgacatctcatatgtcacgtca 4703179  T
Q  204 ctat---------gccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
      ||          |||||||||||||||| | ||| | |||| | ||| |||||||||||||||||||||| | ||||| ||||||  || ||||||||    
T  4703180 tcataaaactcgcaccacatcatcacttaatagaattatttaatgccagagactaaagtgataacggaagtgtacagtcaaagacttctttgtatttaat 4703279  T
Q  295 cctgaattagggacctatg 313  Q
     |||| |||||||||||||    
T  4703280 tctgagttagggacctatg 4703298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 313
Target Start/End: Original strand, 47878358 - 47878565
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    ||||| || ||||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| | ||||| |||||||    
T  47878358 atttaggaatttgatattcaattttggaatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctatgacacctcatat 47878457  T
Q  195 gccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
    ||           ||||||||||| ||||||| | |   ||||||||| ||||||||||||||||||||||| |||||||| |||||| || ||||||||    
T  47878458 gc-----------gccacatcatcgcttaacagattttattaacgtcatggactaaagtgataacggaagtgtagagtcagggacttatttgtatttaat 47878546  T
Q  295 cctgaattagggacctatg 313  Q
    || || | |||||||||||    
T  47878547 ccagagtcagggacctatg 47878565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 94 - 304
Target Start/End: Original strand, 20599759 - 20599977
Alignment:
Q  94 gatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    |||||| || ||||||||||||||| || ||||| |||||||||||| |||| ||||||| ||||||||||||||| |||||||| ||||||| ||||||    
T  20599759 gatttaggaatttgagattcaatttgggaatattaatttttggttcagggaccaaagtgaccattttttactttcattttagtccctgtgacacctcata 20599858  T
Q  194 tgccatgtca---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaat 284  Q
    || |||||||         ||||| ||||||||||||||||| ||| | ||||  || |||||||||||||||||  ||||| || || ||||||||  |    
T  20599859 tgtcatgtcattgcataacctatgtcacatcatcacttaacataattatttaatatcggggactaaagtgataaccaaagtgtagtgt-agagacttctt 20599957  T
Q  285 tatatttaatcctgaattag 304  Q
    | ||||||||| ||||||||    
T  20599958 tctatttaatcttgaattag 20599977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 313
Target Start/End: Complemental strand, 47874803 - 47874606
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| |||||||  ||||||||           
T  47874803 tttgatattcaattttgggatattgatttttggttcaaggaccaaagtgaccattttatactttcactttggtccctgtgacacatcatatgc------- 47874711  T
Q  204 ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaatta 303  Q
        ||||| |||||| |||||| | |   ||||| ||| ||||||||||||||||||||||||||| |||| |||||| || ||||||||| ||| | |    
T  47874710 ----gccacctcatcatttaacatatttttttaacatca-ggactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcttgagtca 47874616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 50694894 - 50694810
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
    ||||||||||||||||| |||   ||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||    
T  50694894 cacatcatcacttaacagaattttttaacgtcagggactaaagagataacggaagtgcagaatcagaaacttatttatatttaat 50694810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 115 - 273
Target Start/End: Complemental strand, 39869169 - 39869002
Alignment:
Q  115 atttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactat------- 207  Q
    ||||||| ||||| |||||| | ||| ||||||||||||  ||||| |||||||| |||||||  ||||||| || ||||| |||||||  ||           
T  39869169 atttaggtatattaatttttagatcagggactaaagtgactattttatactttcaatttagtcattgtgacacctgatatgtcatgtcatcataaaatat 39869070  T
Q  208 --gccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtc 273  Q
      | ||||||||||||||||| ||| | |||||||||| |||||||||||||||||||||||||||||    
T  39869069 gtgtcacatcatcacttaacataattatttaacgtcagagactaaagtgataacggaagtgcagagtc 39869002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 26172808 - 26173005
Alignment:
Q  109 gattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtc------ 202  Q
    |||||||||| || ||||||||||||| |||| | ||||||||||| ||||| |||| |||||||||||  ||||||| ||||||  || |||           
T  26172808 gattcaattttggaatattgatttttgattcaggaactaaagtgattattttctactgtcactttagtcattgtgacacctcatactccttgttgacata 26172907  T
Q  203 --ac-tatgccacatcatcactt--aacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatc 295  Q
      || | |||||||| |||||||  |||| |||   |||||| || ||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  26172908 aaacatgtgccacattatcacttttaacataattttttaacggcatggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatc 26173005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 4702023 - 4701941
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||||||  ||||||||| ||||| |||| |||| |||||||  ||||| |||||||||||||||||||||||||    
T  4702023 tttgagattcaattttaggatattgacttttgtttcagggaccaaagtgactattttctactttcactttagtccatgtgaca 4701941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 53771035 - 53771130
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||| ||| | |||||||||  ||||||||||||||||||||||||||||||| | |||  || |||||||| |||| | |||||||||||    
T  53771035 cacttaacagaattatttaacgtcaatgactaaagtgataacggaagtgcagagtcaggggcttctttgtatttaattctgagtcagggacctatg 53771130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 42391769 - 42391851
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||| |||||||   |||||  |||||| ||||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  42391769 tttgagactcaatttgaagatatgaatttttagttcagggactaaagtgaccattttctactttcactttagtccatgtgaca 42391851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 48739944 - 48740005
Alignment:
Q  125 attgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||||||  |||||||    
T  48739944 attgatttttggttcagggactaaagtgactattttttactttcactttagtctttgtgaca 48740005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 21621968 - 21621869
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacc 309  Q
    |||||||||| |||||| ||| | ||||| ||||||||||||||||||||||||||||| | |||  ||||   || ||||||||||||| | |||||||    
T  21621968 cacatcatcagttaacataattatttaacatcagggactaaagtgataacggaagtgcacattcaatgactattttgtatttaatcctgagtcagggacc 21621869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 307
Target Start/End: Original strand, 21623001 - 21623192
Alignment:
Q  125 attgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactat---------gccacatc 215  Q
    ||||||||| ||||||| ||  ||||||| |||||| |||||||| |||||||  ||||||| ||||||  || ||||| |||         ||||||||    
T  21623001 attgattttcggttcatagagcaaagtgaccattttctactttcattttagtctctgtgacacctcatactccttgtcagtataaaacttgtgccacatc 21623100  T
Q  216 atcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattaggga 307  Q
    || | |||||| ||| | |||||||| ||||||||||||||||| |||||||| | |||  ||||   || ||||||||||||||| |||||    
T  21623101 attagttaacataattatttaacgtcggggactaaagtgataacagaagtgcacattcaaggactattttgtatttaatcctgaatcaggga 21623192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 4701907 - 4701825
Alignment:
Q  213 atcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatc 295  Q
    |||||||||||||| ||| | ||||| |||||||||||||||||| |||||||||| |||| | |||||  || |||||||||    
T  4701907 atcatcacttaacagaattatttaacatcagggactaaagtgatagcggaagtgcatagtcggggacttctttgtatttaatc 4701825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 26685327 - 26685409
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||| ||| | |||||||||||||||||| ||| |||| |||  ||||| |||||||| |||||||| |||||||    
T  26685327 tttgagattcaagttatgaatattgatttttggttcagggattaaactgactattttctactttcattttagtccctgtgaca 26685409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 48740006 - 48740060
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagt 272  Q
    ||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||    
T  48740006 cacttaacagaattatttaacgtcagggactaaagtgataacagaagtgcagagt 48740060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 26170785 - 26170700
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatc 295  Q
    |||||||||||||||||||||   |||||  || ||||||||||||||| ||||||||||||| ||  ||||| || |||||||||    
T  26170785 cacatcatcacttaacaaaattttttaacagcatggactaaagtgataatggaagtgcagagtaaggaacttatttgtatttaatc 26170700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 39870537 - 39870636
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttt-tactttcactttagtccatgtgacatctcatatgccatgtc 202  Q
    ||||| ||||||||| | ||| ||||||||||||||  |||| ||||||| ||||||| |||| |||||||| ||| ||||||| |||||||| ||||||    
T  39870537 tttgaaattcaatttggagattttgatttttggttcggggacgaaagtga-catttttctactctcactttattccttgtgacacctcatatgtcatgtc 39870635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 53770953 - 53771021
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactt 172  Q
    |||||||||||| || ||||||||||||||||||||   |||||||||||  ||||| |||||||||||    
T  53770953 tttgagattcaagttggggatattgatttttggttcggagactaaagtgacaattttctactttcactt 53771021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 32244677 - 32244724
Alignment:
Q  221 ttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    |||||||||| | ||||||||||||||||||||||||||||| |||||    
T  32244677 ttaacaaaattatttaacgtcagggactaaagtgataacggatgtgca 32244724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 53770470 - 53770375
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||| ||| | |||||| ||| ||||| |||||||| ||||||||||||||| ||||||  || |||||||| |||| | ||| |||||||    
T  53770470 cacttaacagaattatttaacggcagagactagagtgataatggaagtgcagagtcatagacttctttgtatttaattctgagtcaggaacctatg 53770375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 273
Target Start/End: Original strand, 31844870 - 31844996
Alignment:
Q  147 aaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcaggga 246  Q
    ||||||| |||||||||||||||||||||||| |||||||  |||||  || ||| |   || ||||||||||||||||| | |   |||||  || |||    
T  31844870 aaagtgaccattttttactttcactttagtccttgtgacacgtcatactccttgttagcgtgtcacatcatcacttaacatatttttttaactgcaagga 31844969  T
Q  247 ctaaagtgataacggaagtgcagagtc 273  Q
    | ||| |||||||||||||| ||||||    
T  31844970 cgaaaatgataacggaagtgtagagtc 31844996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 44158753 - 44158665
Alignment:
Q  115 atttagggatattgatttttggttcatggactaaagtgatcatttt-ttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||  |||||||| || |||  ||||||||  ||||||| |||||||    
T  44158753 atttggggatattgatttttggttca-ggactaaagtgaccattttactactttcatttaagtttatgtgacacatcatatgtcatgtca 44158665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 54574682 - 54574573
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||| ||| || ||||| |||||||||  | || ||||||||||||||  |||  |||||||||||||| |||||||||||  ||||  ||||||    
T  54574682 atttaaggagttaggaatttgatattcaatttgagaattttgatttttggttcggggatcaaagtgatcattttctactttcacttcggtccccgtgaca 54574583  T
Q  187 tctcatatgc 196  Q
     |||||||||    
T  54574582 cctcatatgc 54574573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 274
Target Start/End: Original strand, 26685408 - 26685464
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtca 274  Q
    ||||||||| ||| | |||| ||||| |||||||||||||||||||||||| |||||    
T  26685408 cacttaacagaattatttaatgtcagagactaaagtgataacggaagtgcatagtca 26685464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 54574546 - 54574467
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||| ||||| | ||||||||||||||||||||||||| |   ||||| || ||||||||||||| | || ||||||||    
T  54574546 ttaacatcaggaattaaagtgataacggaagtgcagagttaagaacttatttgtatttaatcctgagtcagagacctatg 54574467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 21622067 - 21622001
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||| ||||||||||| | |  ||||||| |||||| ||||||||||||||| | |||||||    
T  21622067 gggatattggtttttggttcaggaatcaaagtgaccattttatactttcactttagtgcttgtgaca 21622001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 32244415 - 32244361
Alignment:
Q  214 tcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||||||||||| ||| | ||||||| | |||| ||||||||||||||||||||    
T  32244415 tcatcacttaacataattatttaacgttatggaccaaagtgataacggaagtgca 32244361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 54574822 - 54574872
Alignment:
Q  249 aaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    ||||||||||| |||||||||||| ||||| ||| || |||||||||||||    
T  54574822 aaagtgataacagaagtgcagagttagagatttatttgtatttaatcctga 54574872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 24753536 - 24753597
Alignment:
Q  207 tgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||||||||||| |||||||||| | ||||||  |  ||||||||||||||| ||||||||    
T  24753536 tgccacatcatcagttaacaaaattatttaacgcgaatgactaaagtgataacagaagtgca 24753597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 313
Target Start/End: Complemental strand, 31844841 - 31844764
Alignment:
Q  236 aacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||| ||| ||| |||||||||| ||||||| ||||| || |||||  || ||||||||||||| | |||||||||||    
T  31844841 aacgacagtgaccaaagtgataagggaagtgtagagttagggacttgtttgtatttaatcctgagtcagggacctatg 31844764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 32244517 - 32244452
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| ||| ||  ||  ||||||| |||||||||||||||||||||||  |||||||    
T  32244517 ggatattgattttcggtgcagagatcaaagtgaccattttttactttcactttagtctctgtgaca 32244452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 38216704 - 38216618
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    ||||| ||||||||| |||||||||||| | | |||| | || |||| || ||  |||||||||||||||||||||||| ||| |||||    
T  38216704 tttgatattcaattttgggatattgattatcgattcaggaaccaaagggacca--ttttactttcactttagtccatgtaacacctcat 38216618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 2786465 - 2786401
Alignment:
Q  122 gatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||| ||||||  ||| ||||||| |||||| |||||| |||||| ||||| |||||    
T  2786465 gatattgattttcggttcagagaccaaagtgaccattttctacttttactttaatccatatgaca 2786401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 6039242 - 6039182
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
    |||||| || |||||||| ||||| | |||||||| || |||||||||| |||||||||||    
T  6039242 ttaacggcacggactaaaatgataccagaagtgcatagccagagacttatttatatttaat 6039182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 24745954 - 24746026
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||||||| ||||  |||||| |||| |||||||| ||||| || |||||||||||||  ||||||| |||||    
T  24745954 gggatattaatttccggttcagggaccaaagtgataattttctattttcactttagtctgtgtgacacctcat 24746026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 25810348 - 25810384
Alignment:
Q  156 attttttactttcactttagtccatgtgacatctcat 192  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  25810348 attttatactttcactttagtccatgtgacacctcat 25810384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 25810415 - 25810491
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacct 310  Q
    |||||||||| ||||||||||||| |||||||||| | ||| || ||   || ||||||||| ||||| ||||||||    
T  25810415 ttaacgtcagagactaaagtgatagcggaagtgcacattcataggctactttgtatttaatcttgaatgagggacct 25810491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 32898311 - 32898526
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| |  ||||| |||||||||  |||||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| |||||||    
T  32898311 atttagggatttagggatttgatattcaatttgaggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtgaca 32898410  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||||||||||||||| | |   |||||||||||||||||||||||||||||||||||||||||| |||||| ||     
T  32898411 cctcatatgc-----------gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttg 32898499  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||| | | |||||||||||    
T  32898500 tatttaatcctaagtcagggacctatg 32898526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 309
Target Start/End: Original strand, 35178671 - 35178881
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| |||||||||| ||||| ||||||||| || |||||||||||||||||| || | |||||||||||||| || ||||||||| |||| | |||||    
T  35178671 atttaaggatttaagaatttgatattcaatttgggaatattgatttttggttcaggggccaaagtgatcattttctagtttcactttggtccctatgaca 35178770  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           |||||||||||||||||| | ||   ||||||||||||||||||||||||||||||||||||| |||| |||||| ||     
T  35178771 cctcatatgc-----------gccacatcatcacttaac-agattttttaacgtcagggactaaagtgataacggaagtgcagaatcagggacttatttg 35178858  T
Q  287 tatttaatcctgaattagggacc 309  Q
    ||||||||||||| | |||||||    
T  35178859 tatttaatcctgagtcagggacc 35178881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 35177651 - 35177437
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||| ||||| |  ||||| ||||||||| |||||| |||||||||||||| |||| ||||| | |||||| |||||||||||| |||| |||||||    
T  35177651 atttaggaatttagggatttgatattcaatttggggatactgatttttggttcagggaccaaagtaaccattttctactttcactttggtccttgtgaca 35177552  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
      | ||||||           ||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||     
T  35177551 cat-atatgc-----------gccacatcatcacttaacagattattttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttg 35177464  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    |||||||||| || | |||||||||||    
T  35177463 tatttaatccggagtcagggacctatg 35177437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 297
Target Start/End: Original strand, 1952818 - 1953035
Alignment:
Q  76 aattagatgatatttagggatttaagattt-------tgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttc 168  Q
    |||||||||| ||||| |||||||||||||       ||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||||    
T  1952818 aattagatgacatttaaggatttaagatttagggatttgatattcaatttgggcatattgatttttggttcagggaccaaagtgaccattttctactttc 1952917  T
Q  169 actttagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||| |||| | ||||| |||||||||           ||||||||||||||||||| | | | |||||||||| ||||||||||||||||||||| ||    
T  1952918 actttggtccctatgacacctcatatgc-----------gccacatcatcacttaacagatttatttaacgtcagagactaaagtgataacggaagtaca 1953006  T
Q  269 gagtcagagacttaattatatttaatcct 297  Q
    |||||| ||||||| || ||| |||||||    
T  1953007 gagtcatagacttatttgtatgtaatcct 1953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 301
Target Start/End: Complemental strand, 5737119 - 5736896
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggata-ttgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgac 185  Q
    |||||| ||||||||  ||||||||||||||| |||||| ||||||||||| ||| |||| |||||||| | ||| |||||| |||||||||| ||||||    
T  5737119 atttagagatttaaggatttgagattcaatttggggatatttgatttttggatcagggaccaaagtgat-aatttctacttttactttagtccttgtgac 5737021  T
Q  186 atctcatatgccatgtca---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcaga 276  Q
    | |||||||| |||||||         || || ||||||||||||||||||||| | ||||||| ||||||||||||||||||| ||||| ||||| |||    
T  5737020 acctcatatgtcatgtcatcgtaaaacctgtgtcacatcatcacttaacaaaattatttaacgtgagggactaaagtgataacgaaagtgtagagttaga 5736921  T
Q  277 gacttaattatatttaatcctgaat 301  Q
    || ||  || |||||||| ||||||    
T  5736920 gatttctttgtatttaattctgaat 5736896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 28619398 - 28619514
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| |  ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||||||||||||    
T  28619398 atttagggatttagggatttgaaattcaatttggggatattgatttttggttcatggattaaagtgatcattttctactttcgatttagtccatgtgaca 28619497  T
Q  187 tctcatatgccatgtca 203  Q
      | ||||| |||||||    
T  28619498 cattatatgtcatgtca 28619514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 76 - 281
Target Start/End: Complemental strand, 10406474 - 10406280
Alignment:
Q  76 aattagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttag 175  Q
    |||||||||| ||||||||||||| || ||||| ||||||||| |  ||||||||||||||||||  ||| |||||||  ||||| |||| ||||||| |    
T  10406474 aattagatgacatttagggatttaggaatttgatattcaatttggaaatattgatttttggttcagagaccaaagtgactattttctactatcactttgg 10406375  T
Q  176 tccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcag 275  Q
    ||| ||||||| |||||||||           ||||||||||||||||||| | |   |||||  ||||||||||||||||||  |||||||||||||||    
T  10406374 tccctgtgacacctcatatgc-----------gccacatcatcacttaacagatttttttaacaccagggactaaagtgataatagaagtgcagagtcag 10406286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 274
Target Start/End: Original strand, 5737886 - 5738065
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||||||||||||| |||||||||||||||| || |  ||| ||||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  5737886 tttgagattcaatttggggatattgatttttgatttagagaccaaagtgaccattttttacttttactttagtccatgtgacacctcatatgtcatgtca 5737985  T
Q  204 --ctatgcc-------acatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtca 274  Q
       ||| ||       |||||||||||||||| ||| | |||||| ||  |||| |||||||||||||||| ||||||||    
T  5737986 tcatataccatgtgttacatcatcacttaacagaattatttaacgccaaagactgaagtgataacggaagtacagagtca 5738065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 297
Target Start/End: Original strand, 10407451 - 10407649
Alignment:
Q  88 tttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacat 187  Q
    ||||||||||||| | ||||| ||||||||| || ||||||||||||||||||  ||||||||| | |||||| |||||||||||| |||| | |||||     
T  10407451 tttagggatttaacactttgatattcaatttgggcatattgatttttggttcagagactaaagtaaccattttctactttcactttggtccttatgacac 10407550  T
Q  188 ctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattat 287  Q
    |||||||||           | ||||||||||||||||| | |   ||||||||||| ||||||||||||||||||||||| ||| |  |||||| || |    
T  10407551 ctcatatgc-----------gtcacatcatcacttaacagatttttttaacgtcaggaactaaagtgataacggaagtgcaaagttatggacttatttgt 10407639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 32564355 - 32564471
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| || |||||||||||||   |||||||| |||||||||  | |||||||| |||||||||| |||| ||||||||||||||||||||    
T  32564355 atttagggatttaggaatttgagattcaatacggggatattcatttttggtcaagggactaaaatgatcattttctactatcactttagtccatgtgaca 32564454  T
Q  187 tctcatatgccatgtca 203  Q
      ||||||| |||||||    
T  32564455 catcatatggcatgtca 32564471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 5965420 - 5965518
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggac 308  Q
    |||||||| |||||||| ||| | |||||||||| |||||||||||||||||||||||||||||| ||||||  || ||||||||||||| | ||||||    
T  5965420 cacatcattacttaacataatcatttaacgtcagagactaaagtgataacggaagtgcagagtcaaagacttctttgtatttaatcctgagtcagggac 5965518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 299
Target Start/End: Original strand, 41754687 - 41754862
Alignment:
Q  122 gatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcact 221  Q
    |||||||||||| | ||||||||| ||||||| |||||||||||||||||||| ||| |||||||  |||||  || |||||   |||||||||||||||    
T  41754687 gatattgattttcgattcatggaccaaagtgaccattttttactttcactttaatccctgtgacacatcatactccttgtcaacgtgccacatcatcact 41754786  T
Q  222 taacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    |||| |  |   |||||| ||||| ||||||| |||||||||||| ||||||||  ||||  || |||||||||||||    
T  41754787 taac-agtttttttaacggcaggg-ctaaagtaataacggaagtgtagagtcaggaacttgtttgtatttaatcctga 41754862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 268
Target Start/End: Complemental strand, 28525002 - 28524845
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca---------ctatgcc 210  Q
    |||||||||||||| |||||| |||| ||| |||  ||||||||||||||||||||||||| |||||  |||||  |  |||||         || ||||    
T  28525002 gggatattgattttcggttcacggaccaaaatgacaattttttactttcactttagtccatctgacacttcatactctttgtcaacataaaatctttgcc 28524903  T
Q  211 acatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||||||| |||||||||| | |||||||||| ||||||| ||||||||||||||||    
T  28524902 acatcatcagttaacaaaattatttaacgtcagagactaaaatgataacggaagtgca 28524845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 310
Target Start/End: Complemental strand, 45476412 - 45476207
Alignment:
Q  114 aatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactat------ 207  Q
    |||||||| |||||||||||||||||| |||| |||||||  ||||| |||||||||||| |||  ||||||| ||| ||  ||  ||||  ||          
T  45476412 aatttaggaatattgatttttggttcagggaccaaagtgacaattttctactttcactttggtctctgtgacacctcttaatcctcgtcagcataacaca 45476313  T
Q  208 ---gccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattag 304  Q
       ||||||||||||||||||| | |   ||||||  || ||||||||||||||| |||||||||||||||||||||| || |||||||| |||||| |     
T  45476312 tgcgccacatcatcacttaacagatttttttaacgggagagactaaagtgataacagaagtgcagagtcagagacttatttgtatttaattctgaatcat 45476213  T
Q  305 ggacct 310  Q
    ||||||    
T  45476212 ggacct 45476207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 41121365 - 41121266
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| |||||||  ||||| |||||||||||||| || ||| ||| |||||||  |||||||    
T  41121365 tttgaaattcaatttggggatattgatttttggttcaaggaccaaagtgacaattttctactttcactttagcccttgttacacctcatatatcatgtca 41121266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 282
Target Start/End: Original strand, 45476426 - 45476613
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||||||| ||||| || |||||||||||||||||| |||||||||||| |||||| |||||| ||||| |||||| |||||  |||||   | |||||    
T  45476426 tttgagatttaatttgggaatattgatttttggttcagggactaaagtgaccattttctacttttactttggtccatatgacacatcatacttcttgtca 45476525  T
Q  204 ctat---------gccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagactta 282  Q
      ||         ||||||||||||||||||| | |   |||||| ||| ||||||||||||||  ||||||||||||||| ||||||    
T  45476526 gcataagacatgcgccacatcatcacttaacatatttttttaacgacagagactaaagtgataagagaagtgcagagtcagcgactta 45476613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 8569648 - 8569560
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||||||||||||||  |||||||||||||| ||||| |||  ||| |||| ||||||| |||||| |||||||||||||||| |||||    
T  8569648 tttgagattcaatttgtggatattgatttttagttcagggatcaaaatgataattttttcctttcattttagtccatgtgacacctcat 8569560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 30134851 - 30134727
Alignment:
Q  79 tagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtcc 178  Q
    ||||||| ||||| |||||||||  ||||| |||||||||  | |||||||||||||||| | |||| |||||||  ||||| ||||||||||||||||     
T  30134851 tagatgacatttaaggatttaaggatttgaaattcaatttgtgaatattgatttttggttaaaggaccaaagtgacaattttctactttcactttagtct 30134752  T
Q  179 atgtgacatctcatatgccatgtca 203  Q
     |||||||  ||| ||| |||||||    
T  30134751 ctgtgacacatcaaatgacatgtca 30134727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 41122616 - 41122716
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    ||||| || ||||||||||||||| | ||||||||||||||||||| |||  |||||||  ||||| || ||||||||||||| ||||||||  ||||||    
T  41122616 atttaggaatttgagattcaatttggagatattgatttttggttcagggatcaaagtgacgattttctattttcactttagtcaatgtgacacttcatat 41122715  T
Q  195 g 195  Q
    |    
T  41122716 g 41122716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 41754211 - 41754105
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcac 220  Q
    ||||||||||||| | |||| |||| |||||||  ||||||||||||||||||||||| | |||||  |||||  || |||||   ||||||||||||||    
T  41754211 ggatattgattttcgattcagggaccaaagtgactattttttactttcactttagtccctatgacacgtcatactccttgtcagcgtgccacatcatcac 41754112  T
Q  221 ttaacaa 227  Q
    |||||||    
T  41754111 ttaacaa 41754105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 39138527 - 39138616
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    ||||||||||||||  |||||||||||||| ||| || | |  ||||||| |||||| ||||||||||||||||| ||||||| ||||||    
T  39138527 tttgagattcaattcggggatattgattttcggtacaagaatcaaagtgaccattttctactttcactttagtccttgtgacacctcata 39138616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 28619134 - 28619070
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtca 274  Q
    ||||||||||||||||||||| | |||||| | | |||||||||||||||| |||||||||||||    
T  28619134 cacatcatcacttaacaaaattatttaacggccgagactaaagtgataacgaaagtgcagagtca 28619070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 12637631 - 12637706
Alignment:
Q  111 ttcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||| ||||||| || |||||||  ||||| |||| ||||||||||| || |||||||||||||||||||||||||    
T  12637631 ttcagtttagggttaatgattttcagttcagggaccaaagtgatcatattctactttcactttagtccatgtgaca 12637706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 9626341 - 9626413
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    ||||||| ||||| |||||| ||| ||||||| ||| ||| ||||||||||||||| ||||||||| ||||||    
T  9626341 ggatattaattttcggttcagggattaaagtggtcaatttctactttcactttagttcatgtgacacctcata 9626413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 24199175 - 24199101
Alignment:
Q  120 gggatattgatttttgg-ttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    ||||||||||||||| | |||| |||| ||| ||||||||||||||||||||||||||   ||||||| ||||||    
T  24199175 gggatattgatttttcgattcagggaccaaaatgatcattttttactttcactttagtatctgtgacacctcata 24199101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 2552272 - 2552186
Alignment:
Q  105 ttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||||||||||| || | ||||||||||| ||||||   || |||||||  ||||| ||||||||||||||||| ||||||| |||||    
T  2552272 ttgagattcaatctaagaatattgattttcggttcagaaaccaaagtgacaattttctactttcactttagtcc-tgtgacacctcat 2552186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 28526425 - 28526507
Alignment:
Q  122 gatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcac 204  Q
    |||||||||||| |||||| | || ||| |||||||||| || |||||||||||||  | ||||| ||||||| || ||||||    
T  28526425 gatattgattttcggttcaagaaccaaaatgatcattttctattttcactttagtcactatgacacctcatattccttgtcac 28526507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 32563836 - 32563766
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcacttta 174  Q
    |||||||||||||||  || |||||||| |||||| | ||| |||||||| |||||| ||||||| |||||    
T  32563836 tttgagattcaatttgagggtattgattattggtttaaggattaaagtgaccattttctactttcgcttta 32563766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 33315107 - 33315029
Alignment:
Q  115 atttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    |||| |||||||| |||||   |||| |||| |||||||  ||||| |||||||||||| |||||||||||| ||||||    
T  33315107 atttggggatattaattttcaattcacggaccaaagtgactattttctactttcactttggtccatgtgacacctcata 33315029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 9625433 - 9625380
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcacttta 174  Q
    ||||||||||||| | |||| | |||||||||| |||||| |||||||||||||    
T  9625433 ggatattgattttcgattcacgaactaaagtgaccattttctactttcacttta 9625380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 28005586 - 28005529
Alignment:
Q  122 gatattgatttttggttcatggactaaagtgatca-ttttttactttcactttagtcc 178  Q
    |||||| |||||||||||| |||| |||||| | | ||||||||||||||||||||||    
T  28005586 gatattaatttttggttcagggaccaaagtggtaaattttttactttcactttagtcc 28005529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 28062889 - 28062832
Alignment:
Q  122 gatattgatttttggttcatggactaaagtgatca-ttttttactttcactttagtcc 178  Q
    |||||| |||||||||||| |||| |||||| | | ||||||||||||||||||||||    
T  28062889 gatattaatttttggttcagggaccaaagtggtaaattttttactttcactttagtcc 28062832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 28619536 - 28619621
Alignment:
Q  223 aacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggac 308  Q
    |||||||| | |||| ||||| ||||||||||||||  ||||||||||||||  ||| |  || ||||||||||||| | ||||||    
T  28619536 aacaaaattatttaatgtcagagactaaagtgataatagaagtgcagagtcaatgacctctttgtatttaatcctgagtcagggac 28619621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 31074142 - 31074081
Alignment:
Q  207 tgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||||||||||| |||||||||| | ||||   ||| ||||||||||||||| ||||||||    
T  31074142 tgccacatcatcagttaacaaaattatttaattccagagactaaagtgataacagaagtgca 31074081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 313
Target Start/End: Complemental strand, 41754097 - 41754040
Alignment:
Q  256 taacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||| ||||| |||||||| |||||  |||||||||||||||| | |||||||||||    
T  41754097 taacgaaagtgtagagtcagggacttgtttatatttaatcctgagtcagggacctatg 41754040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 12637760 - 12637836
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacct 310  Q
    |||| ||| |||||||||||||||||||||||||| | ||||  |||   || |||| |||||||| ||||||||||    
T  12637760 ttaatgtcggggactaaagtgataacggaagtgcacattcaggaactactttgtattcaatcctgagttagggacct 12637836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 28006475 - 28006539
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtga 184  Q
    ||||||||||||||| |||||  ||| ||||||| || ||| || |||||||||||||| |||||    
T  28006475 gggatattgatttttagttcagtgaccaaagtgaccactttctattttcactttagtccttgtga 28006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 28006576 - 28006628
Alignment:
Q  213 atcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagt 265  Q
    ||||||| |||||| ||| | ||||||||||||  ||||||||||||||||||    
T  28006576 atcatcagttaacagaattatttaacgtcaggggttaaagtgataacggaagt 28006628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 28063778 - 28063842
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtga 184  Q
    ||||||||||||||| |||||  ||| ||||||| || ||| || |||||||||||||| |||||    
T  28063778 gggatattgatttttagttcagtgaccaaagtgaccactttctattttcactttagtccttgtga 28063842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 28063879 - 28063931
Alignment:
Q  213 atcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagt 265  Q
    ||||||| |||||| ||| | ||||||||||||  ||||||||||||||||||    
T  28063879 atcatcagttaacagaattatttaacgtcaggggttaaagtgataacggaagt 28063931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 3e-45; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 36280183 - 36280398
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || |||||||||||||||| | |||||||||||| |||||| | |||||| ||| |||| |||||||    
T  36280183 atttaaggatttaggaatttgatattcaatttgggaatattgatttttggtttagggactaaagtgaccattttcttctttcattttggtccgtgtgaca 36280282  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||||||||||||||| | |   ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  36280283 cctcatatgc-----------gccacatcatcacttaacatatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttattta 36280371  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| | || ||||||||    
T  36280372 tatttaatcctgagtcagagacctatg 36280398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 95 - 313
Target Start/End: Complemental strand, 2591875 - 2591669
Alignment:
Q  95 atttaagattttgagatt-caatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    ||||| || ||||||||| |||||| | |||||||||||||| |||| |||| ||||||   ||||||||||||||||||||||||||||||| ||||||    
T  2591875 atttaggaatttgagatttcaatttcgagatattgatttttgcttcagggaccaaagtggcaattttttactttcactttagtccatgtgacacctcata 2591776  T
Q  194 tgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaa 293  Q
    ||||||             |||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||  || |||||||    
T  2591775 tgccat-------------atcatcacttaacagaataacttaacatcagggactaaagtgatcatggaagtgcagagtcagagacttgtttgtatttaa 2591689  T
Q  294 tcctgaattagggacctatg 313  Q
    |||||| | |||||||||||    
T  2591688 tcctgagtcagggacctatg 2591669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 104 - 313
Target Start/End: Complemental strand, 36279192 - 36278994
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| ||||||||  ||||||||||| |||| ||||||| |||||| |||||||||||| |||| ||||||| ||||||||            
T  36279192 tttgatattcaatttggggatatttttttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcatatg-------- 36279101  T
Q  204 ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaatta 303  Q
       || ||||||||||||||| | |||   |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||| |    
T  36279100 ---tgtcacatcatcacttaaaagaattttttaacgtcagggactaaaatgataacggaagtgcagagtcagagacttatttgtatttaatcctgaatca 36279004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 95 - 313
Target Start/End: Complemental strand, 48573234 - 48573027
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    ||||| || ||||| ||||||||| || ||||||||||||||||||||||  ||||||| |||||| |||||||||||| |||| ||||||| |||||||    
T  48573234 atttaggaatttgatattcaattttggaatattgatttttggttcatggatcaaagtgaccattttctactttcactttggtccctgtgacacctcatat 48573135  T
Q  195 gccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
    ||           || |||||||| ||||||||| |   ||||||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||    
T  48573134 gc-----------gcaacatcatcgcttaacaaatttttttaacgtcaaggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaat 48573046  T
Q  295 cctgaattagggacctatg 313  Q
    ||||| | |||||||||||    
T  48573045 cctgagtcagggacctatg 48573027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 311
Target Start/End: Original strand, 48574325 - 48574538
Alignment:
Q  87 atttagggattta-agattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgac 185  Q
    ||||||||||||| |||||| || ||||||||| |||||||||| |||||||||| |||||||||||| |||||| |||||||||||| |||| ||||||    
T  48574325 atttagggatttagagattt-gatattcaatttggggatattgaattttggttcaaggactaaagtgaccattttctactttcactttggtccctgtgac 48574423  T
Q  186 atctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatt 285  Q
    | |||||||||           |||||||||||| |||| | | |   ||||||||| ||||||||||||||||| |||||||||||||| |||||| ||    
T  48574424 acctcatatgc-----------gccacatcatcatttaaaagatttttttaacgtcaaggactaaagtgataacgaaagtgcagagtcagggacttattt 48574512  T
Q  286 atatttaatcctgaattagggaccta 311  Q
     ||||||||||||| | |||||||||    
T  48574513 gtatttaatcctgagtcagggaccta 48574538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 53958966 - 53959181
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || |||||||||||||||||| || | |||||||  ||||| |||||||||||| |||| |||||||    
T  53958966 atttaaggatttaggaatttgatattcaatttgggaatattgatttttggttcaggggccaaagtgacaattttctactttcactttggtccctgtgaca 53959065  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||||||||||||||||| |   |||||||||| ||||||||||||||||||||||||||||||   ||||| ||     
T  53959066 gctcatatgc-----------gccacatcatcacttaacaaatttttttaacgtcagagactaaagtgataacggaagtgcagagtcatgaacttatttg 53959154  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||| ||| | || ||||||||    
T  53959155 tatttaatcatgagtcagagacctatg 53959181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 87 - 294
Target Start/End: Original strand, 55389335 - 55389531
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || ||||||||||| |||||| |||| ||||||| |||||| |||||||||||| |||| |||||||    
T  55389335 atttaaggatttaggaatttgatattcaatttgggaatattgattttcggttcagggaccaaagtgaccattttctactttcactttggtccctgtgaca 55389434  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     ||||||||           |||||||||||||||||||| | |    ||||||  |||||||||||||||||||||||| |||||||| |||||||||     
T  55389435 cctcatatg-----------tgccacatcatcacttaacatattgttgtaacgttggggactaaagtgataacggaagtgtagagtcagggacttaattg 55389523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 76 - 313
Target Start/End: Original strand, 52318165 - 52318398
Alignment:
Q  76 aattagatgatatttagggatttaagattt-------tgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttc 168  Q
    |||||||||| ||||| |||||||||||||       ||| ||||||||| ||||||||| |||||||||||||||| ||||||| |||||| |||||||    
T  52318165 aattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgttttttggttcatggaccaaagtgaccattttctactttc 52318264  T
Q  169 actttagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||| | || ||||||| |||||||||           | | ||||||||||||||| | |   |||||||||||||||||||| ||| | ||||||||    
T  52318265 actttggaccttgtgacacctcatatgc-----------gtctcatcatcacttaacagatttttttaacgtcagggactaaagtaatatcagaagtgca 52318353  T
Q  269 gagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||| |||||| || ||||||||||||| | ||||| |||||    
T  52318354 gagtcagggacttatttgtatttaatcctgagtcagggatctatg 52318398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 95 - 275
Target Start/End: Original strand, 48809529 - 48809697
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    ||||| || ||||| |||||||||||| ||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||| | ||||| |||||||    
T  48809529 atttaggaatttgatattcaatttaggaatattgatttttggttcatggatcaaagtgaccattttctactttcactttagtccttctgacacctcatat 48809628  T
Q  195 gccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcag 275  Q
    ||           |||||||||||||||||| | ||   || |||||| ||||||||||||||||||||||||||||||||    
T  48809629 gc-----------gccacatcatcacttaac-agatttttttacgtcatggactaaagtgataacggaagtgcagagtcag 48809697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 76 - 195
Target Start/End: Complemental strand, 53957941 - 53957822
Alignment:
Q  76 aattagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttag 175  Q
    ||||| |||| ||||| ||||||| |  ||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||| |    
T  53957941 aattatatgacatttaaggatttagggatttgacattcaatttggggatattgatttttggttcatggactaaagtaatcattttctactttcactttgg 53957842  T
Q  176 tccatgtgacatctcatatg 195  Q
    |||  |||||| ||||||||    
T  53957841 tccccgtgacacctcatatg 53957822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 50753965 - 50753859
Alignment:
Q  207 tgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattaggg 306  Q
    |||||||||||||||||||| | |   |||||| ||||||||||||||||||| |||||| ||||||||| ||||  |||||||||||||||||||||||    
T  50753965 tgccacatcatcacttaacagatttttttaacggcagggactaaagtgataacagaagtgtagagtcagaaacttgtttatatttaatcctgaattaggg 50753866  T
Q  307 acctatg 313  Q
    |||||||    
T  50753865 acctatg 50753859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 95 - 313
Target Start/End: Complemental strand, 17700768 - 17700560
Alignment:
Q  95 atttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatat 194  Q
    ||||| || ||||| ||||||||| ||  ||||||||||| ||||| |||| ||||||| |||||| |||||||||||| |||| ||||||| |||||||    
T  17700768 atttaggaatttgatattcaattttggattattgattttttgttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcatat 17700669  T
Q  195 gccatgtcactatgccacatcatcacttaacaaaataactt-aacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaa 293  Q
    ||           | |||||||||  |||||| | |   || |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  17700668 gc-----------ggcacatcatcgtttaacagattttttttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaa 17700580  T
Q  294 tcctgaattagggacctatg 313  Q
    |||||| | ||| |||||||    
T  17700579 tcctgagtcaggaacctatg 17700560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 11773050 - 11773132
Alignment:
Q  231 aacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| | |||||||||||    
T  11773050 aacttaacgccagggactaaagtgataacggaagtgtagagtcagagacttatttgtatttaatcctgagtcagggacctatg 11773132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 312
Target Start/End: Complemental strand, 48808647 - 48808409
Alignment:
Q  76 aattagatgatatttagggatttaagattt-------tgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttc 168  Q
    |||||||| ||||||| |||||||||||||       ||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||||    
T  48808647 aattagataatatttaaggatttaagatttagggatttgatattcaatttgggaatattgatttttggttcagggaccaaagtgaccattttctactttc 48808548  T
Q  169 actttagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    ||||| |||  ||||||| |||||||||   | ||| || |  ||| ||||||||||| | |   ||||| || ||||||||||||| ||||||||||||    
T  48808547 actttggtctctgtgacacctcatatgc---gccac-at-catcataatcacttaacatatttttttaacatccgggactaaagtgacaacggaagtgca 48808453  T
Q  269 gagtcagagacttaattatatttaatcctgaattagggacctat 312  Q
    |||| ||  ||||| || ||||||||||||| | || |||||||    
T  48808452 gagttaggaacttatttgtatttaatcctgagtcagagacctat 48808409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 17701921 - 17701999
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctat 312  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| ||| | ||||||||||    
T  17701921 ttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggacctat 17701999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 33427967 - 33427889
Alignment:
Q  108 agattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||| || ||||||||||||||||||||| || |||||||||| ||||| |||||||||||||||||||||||||    
T  33427967 agattcaagttggggatattgatttttggttcaggggctaaagtgataattttctactttcactttagtccatgtgaca 33427889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 55388218 - 55388116
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacc 309  Q
    ||||||||||||||||||| |   |||||||||||||||||||||||||||| |||||||||||||  ||||| || ||||||||||||| | || ||||    
T  55388218 cacatcatcacttaacaaatttttttaacgtcagggactaaagtgataacgggagtgcagagtcagtaacttatttgtatttaatcctgagtcagagacc 55388119  T
Q  310 tat 312  Q
    |||    
T  55388118 tat 55388116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 47118037 - 47118118
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||    
T  47118037 cacttaacaaaattatttaacgtcagggactaaagtgataacgaaagtgcagagtcagagacttctttgcatttaatcctga 47118118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 19115056 - 19115132
Alignment:
Q  110 attcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||| || ||||||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||    
T  19115056 attcaaattggggatattgatttttagttcatggactaaagtggttattttctactttcactttagtccatgtgaca 19115132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 295
Target Start/End: Complemental strand, 20464329 - 20464129
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    |||||| ||||| || |||||||||||||||| ||||||||| ||||||| |||||| |||||||| |||||||  ||||| | ||| |||| ||||| |    
T  20464329 tttgaggttcaaattggggatattgatttttgattcatggaccaaagtgaccattttctactttcattttagtctctgtgatacctcgtatgtcatgtta 20464230  T
Q  204 c---------tatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
              | || ||||||||||||||||| | | | ||||||||  |||||||||||||||| ||||||||||||||| |||||  || ||||||||    
T  20464229 tcgtaaaacatgtgtcacatcatcacttaacagagttatttaacgtcgtggactaaagtgataacagaagtgcagagtcagggacttctttgtatttaat 20464130  T
Q  295 c 295  Q
    |    
T  20464129 c 20464129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 45600925 - 45601019
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||| ||| | ||||||||  |||||||||||||||||||||||||||||||| |||||  || ||||||||||||||| |||||||||||    
T  45600925 cacttaacagaattatttaacgtcgtggactaaagtgataacggaagtgcagagtcag-gacttctttgtatttaatcctgaatcagggacctatg 45601019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 55388316 - 55388217
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||| ||||| |  ||||| ||||||||| ||||||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| |||||||    
T  55388316 atttaggaatttagggatttgatattcaatttggggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgaca 55388217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 612477 - 612375
Alignment:
Q  101 gattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatg 200  Q
    ||||| || ||| ||||| ||||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||  ||||||| ||||| || ||||    
T  612477 gatttagatatttaattttgggatattgatttttggttcatgggttaaattgatcattttctactttcactttagtctctgtgacacctcatgtgtcatg 612378  T
Q  201 tca 203  Q
    |||    
T  612377 tca 612375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 47428466 - 47428548
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||| ||| | ||||| |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||    
T  47428466 tttgagattcaagttatgaatattaatttttggttcagggactaaagtgaccatttcctactttcactttagtccatgtgaca 47428548  T

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Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 19114752 - 19114671
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||| || |||||||||||||||| |||| ||| |||||||| |||||| ||||||||||||||||| |||||||    
T  19114752 tttgagattcaagtt-gggatattgatttttgattcagggattaaagtgaccattttctactttcactttagtccttgtgaca 19114671  T

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Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 33837431 - 33837333
Alignment:
Q  76 aattagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcacttta 174  Q
    |||||||||| |||||| || |||||  ||||| ||||||| | ||||||||||||||||||||| |||| ||||||| |||||| |||||||| ||||    
T  33837431 aattagatgagatttagagacttaaggatttgaaattcaatctggggatattgatttttggttcagggaccaaagtgaccattttctactttcatttta 33837333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 299
Target Start/End: Complemental strand, 3671183 - 3671094
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    ||||||||||||||||| |||   |||||| |||||| ||||||||||||||||||| ||||||| ||||||| || |||||||| ||||    
T  3671183 cacatcatcacttaacataattttttaacggcagggattaaagtgataacggaagtggagagtcatagacttatttgtatttaattctga 3671094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 36827453 - 36827542
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    ||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||| | | ||||||| |   ||||||||||||||||    
T  36827453 cacatcatcacttaacaaaattatttaacatcagagactaaagtgataacggaagtgtacattcagagattattttatatttaatcctga 36827542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 49261523 - 49261615
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||| | ||||| |||||||||| ||||||||||||||||||| |||||||| |||||||   || ||||||||||||| | |||||||||||    
T  49261523 cacttaatagaataaattaacgtcagagactaaagtgataacggaaatgcagagttagagact---ttgtatttaatcctgagtcagggacctatg 49261615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 34263926 - 34263850
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacct 310  Q
    |||| |||||||| ||||||||||| ||||||| ||||||||||||||| || ||||||||||||||| | ||||||    
T  34263926 ttaatgtcagggattaaagtgataatggaagtgtagagtcagagacttatttgtatttaatcctgaatcaaggacct 34263850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 47117958 - 47118036
Alignment:
Q  107 gagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||| || ||||||||||||||||||||| |||||||||||| || ||| || |||||||||||||| |||||||    
T  47117958 gagattcaagttggggatattgatttttggttcagggactaaagtgacca-tttctattttcactttagtccttgtgaca 47118036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 313
Target Start/End: Original strand, 2592014 - 2592088
Alignment:
Q  239 gtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||||||||||||||||||||||||||   ||||||| |||||| || ||||||||||||| | |||||||||||    
T  2592014 gtcagggactaaagtgataacggaagtattgagtcagggacttatttgtatttaatcctgagtcagggacctatg 2592088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 45599124 - 45599046
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgt 182  Q
    |||||| ||||| ||| | |||||||||||||||||| | |||||||||| |||||| |||||||| ||||||||||||    
T  45599124 tttgagtttcaagttaagaatattgatttttggttcaggaactaaagtgaccattttctactttcattttagtccatgt 45599046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 33428339 - 33428420
Alignment:
Q  105 ttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||| || | ||||||||||||| ||| | |||||||||||| ||||||||||||||| |||||||  |||||||    
T  33428339 ttgagattcaagtttgagatattgattttttgttgagggactaaagtgaccattttttactttcattttagtctttgtgaca 33428420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 45600842 - 45600911
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcacttt 173  Q
    ||||| |||||| || ||||||||||||||||||||| |||||||| ||  |||||||||||||||||||    
T  45600842 tttgaaattcaagttggggatattgatttttggttcaaggactaaactggccattttttactttcacttt 45600911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 275
Target Start/End: Original strand, 47075337 - 47075394
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcag 275  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||||    
T  47075337 cacttaacaaaattatttaacgtcagagactaaagtgataacggaagtgtagagtcag 47075394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 47075258 - 47075326
Alignment:
Q  108 agattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagt 176  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||  ||||| |||||| ||||||||    
T  47075258 agattcaagttggggatattgatttttggttcagggactaaagtgacaattttctactttaactttagt 47075326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 52317125 - 52317022
Alignment:
Q  209 ccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggac 308  Q
    |||||||||||||||||| | |   ||||||||| |||||||| |||||||||| ||||||||| | ||||||| || ||||||||| ||| | || |||    
T  52317125 ccacatcatcacttaacagatttttttaacgtcatggactaaaatgataacggaggtgcagagttaaagacttatttgtatttaatcatgagtcagagac 52317026  T
Q  309 ctat 312  Q
    ||||    
T  52317025 ctat 52317022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 36827328 - 36827418
Alignment:
Q  94 gatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtga 184  Q
    |||||| || ||||| ||||||||| |||||||||||||| | |||| |||| ||| | |||||||| || |||||||||||||| |||||    
T  36827328 gatttaggaatttgaaattcaatttggggatattgattttcgattcagggaccaaaataatcattttctattttcactttagtccctgtga 36827418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 19115133 - 19115227
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||| ||| | ||||||| |||||||||||| | ||||||||||||||||||  |||||  || ||||||||||||| | | |||||||||    
T  19115133 cacttaacagaattatttaacgttagggactaaagtaaaaacggaagtgcagagtca-tgacttctttgtatttaatcctgagtgaaggacctatg 19115227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 49261456 - 49261522
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||||||| |||| ||| |||||||| |||||| ||||| ||||||||||  |||||||    
T  49261456 gggatattgatttttgattcagggattaaagtgaccattttatacttccactttagtctttgtgaca 49261522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 19114667 - 19114578
Alignment:
Q  221 ttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacct 310  Q
    |||||| ||| | ||||||| || |||||||||||||||||||||||| ||| || |||||  || ||||||||| ||| | ||||||||    
T  19114667 ttaacagaattatttaacgtaagagactaaagtgataacggaagtgcaaagttagtgacttctttgtatttaatcttgagtcagggacct 19114578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 47074900 - 47074828
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagt 176  Q
    |||||| || || |||||| |||||||||||| |||| |||||||||||| |||||| || ||||| ||||||    
T  47074900 tttgaggtttaagttaggggtattgatttttgattcaaggactaaagtgaccattttctattttcaatttagt 47074828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 40206118 - 40206055
Alignment:
Q  128 gatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctca 191  Q
    |||||| |||||| |||| ||||||| |||||| |||||||||||||| || ||||||| ||||    
T  40206118 gattttcggttcaaggaccaaagtgaccattttatactttcactttagcccttgtgacaactca 40206055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 45599018 - 45598988
Alignment:
Q  242 agggactaaagtgataacggaagtgcagagt 272  Q
    |||||||||||||||||||||||||||||||    
T  45599018 agggactaaagtgataacggaagtgcagagt 45598988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 3694003 - 3694076
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtc 177  Q
    |||||||||||||||  ||| ||| ||||||  |||| |||  ||||||| |||||| ||||||||||||||||    
T  3694003 tttgagattcaatttgaggagattaattttttattcagggatcaaagtgaccattttgtactttcactttagtc 3694076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 33427860 - 33427794
Alignment:
Q  246 actaaagtgataacggaagtgcagagtcagagacttaa-ttatatttaatcctgaattagggacctatg 313  Q
    ||||||||||||||| |||||||||||||| |  |||| || ||||||||||||||| | |||||||||    
T  33427860 actaaagtgataacgaaagtgcagagtcaggg--ttaatttgtatttaatcctgaatcaaggacctatg 33427794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 33428447 - 33428516
Alignment:
Q  244 ggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||||||||||| ||||||| ||||||||||  |||||  || |||||||| |||| | |||||||||||    
T  33428447 ggactaaagtgacaacggaaatgcagagtcaaggacttctttgtatttaattctgagtcagggacctatg 33428516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 40318010 - 40317937
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtc 177  Q
    ||||||||| ||||| || ||||||||||||| |||| |||| |||||||  ||||| |||||||  |||||||    
T  40318010 tttgagatttaattttggaatattgatttttgattcagggaccaaagtgactattttctactttcgttttagtc 40317937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 47428056 - 47428008
Alignment:
Q  123 atattgatttttggttcatggactaaagtgatcattttttactttcact 171  Q
    ||||||||||||| ||||  ||||||||||| ||||||||||| |||||    
T  47428056 atattgatttttgattcagagactaaagtgaccattttttactctcact 47428008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 274
Target Start/End: Original strand, 47428549 - 47428605
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtca 274  Q
    ||||||||| ||| | ||||||| |  |||| |||||||||||||||||||||||||    
T  47428549 cacttaacataattatttaacgttatagactgaagtgataacggaagtgcagagtca 47428605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 77 - 281
Target Start/End: Original strand, 14891003 - 14891196
Alignment:
Q  77 attagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagt 176  Q
    ||||||||| ||||||||||||| || ||||| ||||||||| || ||||||||||||| |||| |||||||||||| |||||| |||| ||||||| ||    
T  14891003 attagatgacatttagggatttaggaatttgaaattcaatttgggaatattgatttttgattcagggactaaagtgaccattttctactatcactttggt 14891102  T
Q  177 ccatgtgacatctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcaga 276  Q
    || ||||||| |||||||||           ||||||||||||||||||| | |   |||||||||| |||||||||||||||||||||| |||||||||    
T  14891103 ccttgtgacacctcatatgc-----------gccacatcatcacttaacatatttttttaacgtcagagactaaagtgataacggaagtgtagagtcaga 14891191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 25590687 - 25590473
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || ||||||||||||||||||  ||| ||||||| |||||| |||||||||||| |||| |||||||    
T  25590687 atttaaggatttaggaatttgatattcaatttgggaatattgatttttggttcagagaccaaagtgaccattttctactttcactttggtccctgtgaca 25590588  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           |||||||||||||||||||||||   |||||||||| || |||||||||||| |||||||||| ||||||||||| ||     
T  25590587 cctcatatgc-----------gccacatcatcacttaacaaaattttttaacgtcagagattaaagtgataacagaagtgcagaatcagagacttatttg 25590499  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    |||||||||| || | |||||||||||    
T  25590498 tatttaatcc-gagtcagggacctatg 25590473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 312
Target Start/End: Complemental strand, 2464926 - 2464712
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| |  ||||| ||||||||| ||||||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| |||||||    
T  2464926 atttaaggatttagggatttgatattcaatttggggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgaca 2464827  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||||||||||||||||| |   |||||||||| |||||||||||||||| ||||||||||| || |||||| ||     
T  2464826 cctcatatgc-----------gccacatcatcacttaacaaatttttttaacgtcagagactaaagtgataacgtaagtgcagagttagggacttatttg 2464738  T
Q  287 tatttaatcctgaattagggacctat 312  Q
    ||||||||| ||| | | ||||||||    
T  2464737 tatttaatcatgagtcatggacctat 2464712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 28590978 - 28591195
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttt-tggttcatggactaaagtgatcattttttactttcactttagtccatgtgac 185  Q
    ||||| |||||||||| ||||| ||||||||| || ||||||||||| ||||||| |||| ||||||| |||||| |||||||||||| |||| ||||||    
T  28590978 atttaaggatttaagaatttgatattcaatttgggaatattgattttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgac 28591077  T
Q  186 atctcatatgccatgtcactatgccacatcatcacttaacaaaataact-taacgtcagggactaaagtgataacggaagtgcagagtcagagacttaat 284  Q
    | |||||||||           ||||||||||||||||||| | |   | ||||||| |||||||||||||||| |||||||||||||||| || ||| |    
T  28591078 acctcatatgc-----------gccacatcatcacttaacagattttttgtaacgtcggggactaaagtgataaaggaagtgcagagtcagggatttatt 28591166  T
Q  285 tatatttaatcctgaattagggacctatg 313  Q
    | ||||||||||||| | |||||||||||    
T  28591167 tgtatttaatcctgagtcagggacctatg 28591195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 110 - 313
Target Start/End: Original strand, 545925 - 546117
Alignment:
Q  110 attcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgc 209  Q
    ||||||||| || |||||||||||||||||| |||| |||||||  ||||| |||||||||||| |||| ||||||| |||||||||           |     
T  545925 attcaatttgggcatattgatttttggttcaaggaccaaagtgactattttctactttcactttggtccttgtgacacctcatatgc-----------gt 546013  T
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacc 309  Q
    || |||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||  ||||||  | ||||||||||||| | |||||||    
T  546014 catatcatcacttaacaaatttttttaacgtcagggactaaagtgataacggaagtgcagagtcaaggacttatctgtatttaatcctgagtcagggacc 546113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 313
Target Start/End: Complemental strand, 4593093 - 4592903
Alignment:
Q  111 ttcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgcc 210  Q
    |||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| |||| || |||||||||           |||    
T  4593093 ttcaatttgggcatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtg-cacctcatatgc-----------gcc 4593006  T
Q  211 acatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacct 310  Q
    |||||||||||||||| | |   |||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| ||| | |||||| |    
T  4593005 acatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggactt 4592906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 8074707 - 8074493
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||  |  ||||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||||||||| || | |||||||    
T  8074707 atttagggatttggggatttgatattcaatttgggcatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtacctgtgaca 8074608  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||||||||||||||  | |   ||||||||||| |||||||||||||||||||||||||||||| |||||| ||     
T  8074607 cctcatatgc-----------gccacatcatcacttaaccgatttt-ttaacgtcaggaactaaagtgataacggaagtgcagagtcagggacttatttg 8074520  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| | |||||| ||||    
T  8074519 tatttaatcctgagtcagggacttatg 8074493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 87 - 312
Target Start/End: Original strand, 8075699 - 8075913
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||| || || ||||| ||||||||| || |||||||||||||||||| |||| ||||||||||||||  ||||||||||| |||| |||||||    
T  8075699 atttagggatataggaatttgatattcaatttgggaatattgatttttggttcagggaccaaagtgatcattttcgactttcactttggtccttgtgaca 8075798  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           | ||||||||||||||||| | |   | ||||||||||||||||||||||||| ||||||||| ||||| ||||  ||     
T  8075799 cctcatatgc-----------gtcacatcatcacttaacagattttttaaacgtcagggactaaagtgataacgaaagtgcagaatcagatacttttttg 8075887  T
Q  287 tatttaatcctgaattagggacctat 312  Q
    ||||||||| ||||| ||||| ||||    
T  8075888 tatttaatcttgaatcagggatctat 8075913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 32640545 - 32640330
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||||||||| |||| |||||||    
T  32640545 atttaaggatttaggaatttgatattcaattttggaatattgatttttggttcaaggaccaaagtgaccattttctactttcactttggtccctgtgaca 32640446  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     || |||||           || ||||||||||||||||||| |   |||||||||| ||||||||||||||| |||||  ||||| || |||||| ||     
T  32640445 ccttatatg-----------tgtcacatcatcacttaacaaatttttttaacgtcagagactaaagtgataacagaagtttagagttagggacttatttg 32640357  T
Q  287 tatttaatcctgaattagggacctatg 313  Q
    ||||||||||||| ||| || ||||||    
T  32640356 tatttaatcctgagttatggtcctatg 32640330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 87 - 301
Target Start/End: Original strand, 2466639 - 2466843
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| |||||||||| ||||| ||||||||| || ||||||| |||||||||| |||| ||| |||  ||||| |||||||||||| ||||||| ||||    
T  2466639 atttaaggatttaagaatttgatattcaatttgggaatattgaattttggttcagggaccaaaatgactattttctactttcactttggtccatgggaca 2466738  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataactt-aacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatt 285  Q
     |||||||||            || ||||||||||||||| | |   || ||||||||||||||||||||||||||||||||||||| || |||||| ||    
T  2466739 cctcatatgca-----------ccgcatcatcacttaacagattttttttaacgtcagggactaaagtgataacggaagtgcagagttagggacttattt 2466827  T
Q  286 atatttaatcctgaat 301  Q
     |||||||||||||||    
T  2466828 ttatttaatcctgaat 2466843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 311
Target Start/End: Original strand, 32641616 - 32641805
Alignment:
Q  110 attcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgc 209  Q
    ||||||||| ||||||||||||||||||| | |||  ||||| | ||||||||||||||| ||| |||| ||||| | |||||||||           ||    
T  32641616 attcaatttggggatattgatttttggttgagggatcaaagtaaccattttttactttca-tttggtccctgtgatacctcatatgc-----------gc 32641703  T
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacc 309  Q
    ||||||||||||||||| | |   ||||||||||||| ||||||||||||||||||||||||||||  ||||| || ||||||||| ||| | |||||||    
T  32641704 cacatcatcacttaacatatttttttaacgtcagggattaaagtgataacggaagtgcagagtcagcaacttatttgtatttaatcttgagtaagggacc 32641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 578637 - 578723
Alignment:
Q  106 tgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||||| |||||||||| |||||||||||| ||| |||||    
T  578637 tgagattcaatttagggatattgattttcggttcagggaccaaagtgatcattctttactttcattttagtccatgtcacacctcat 578723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 40612525 - 40612702
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| |  ||||  ||||||||| || |||||||||||||||||| |||| ||||| | |||||| |||||||||||| |||| |||||||    
T  40612525 atttagggatttagggatttgttattcaatttgggcatattgatttttggttcagggaccaaagtaaccattttctactttcactttggtccttgtgaca 40612624  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcag 275  Q
     |||||||||           |||| |||||||||||||| | |   ||||||||||| | ||||||||||||||||||||||||||||    
T  40612625 cctcatatgc-----------gccatatcatcacttaacagatttttttaacgtcaggaattaaagtgataacggaagtgcagagtcag 40612702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 104 - 299
Target Start/End: Complemental strand, 16979252 - 16979048
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||||||||| |||  ||||||||||||||| |||| | || ||||||| |||||||||  ||||||||||||| | | |||| ||||||| |||||||    
T  16979252 tttgagattcagtttgaggatattgatttttgattcaggaaccaaagtgaccattttttatcttcactttagtccctattacatttcatatgacatgtca 16979153  T
Q  204 ---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
             || || ||||||||||||||||| ||||||||||||| || ||||||| |||||||| |||| |||||| || |||||| ||  |||||||    
T  16979152 ttgtaccaactgtgtcacatcatcacttaacagaataacttaacgttagagactaaaatgataacgtaagtacagagttagggacttatttgcatttaat 16979053  T
Q  295 cctga 299  Q
     ||||    
T  16979052 tctga 16979048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 125 - 313
Target Start/End: Original strand, 19186114 - 19186301
Alignment:
Q  125 attgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcacttaa 224  Q
    ||||||||||| | || |||| |||||||  |||||||||||||||||| |||| |||||||  |||||  || |||||   |||||||||||| |||||    
T  19186114 attgatttttgatgca-ggaccaaagtgactattttttactttcacttttgtccctgtgacacgtcatactccttgtcagcgtgccacatcatcgcttaa 19186212  T
Q  225 caaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    || | |   |||||| || |||||||||||||||||||| || ||||||||||||||  || ||||||||||| | | |||||||||||    
T  19186213 cagattgttttaacgacaaggactaaagtgataacggaaatgtagagtcagagacttgtttgtatttaatcctaagtcagggacctatg 19186301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 274
Target Start/End: Complemental strand, 9537282 - 9537103
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtc- 202  Q
    ||||||||||||||| |||||||||||||||| |||| |||  |||||||  ||||| ||||||||||||||||  |||||||  ||||||| | ||||     
T  9537282 tttgagattcaatttggggatattgatttttgattcagggatcaaagtgactattttctactttcactttagtcactgtgacacatcatatgacttgtcg 9537183  T
Q  203 -------ac-tatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtca 274  Q
           || | ||||||||||||||||| || ||| | |||||||||| |||||||||||||| ||||||||| |||||    
T  9537182 tcgtaaaacatgtgccacatcatcacttaccataattatttaacgtcagtgactaaagtgataatggaagtgcacagtca 9537103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 40611517 - 40611408
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || ||||| ||||||||| || |||||||||||||||||| ||||  |||||| |||||| |||||||||||| |||| |||||||    
T  40611517 atttaaggatttaggaatttgatattcaatttgggaatattgatttttggttcagggacccaagtgaccattttctactttcactttggtccctgtgaca 40611418  T
Q  187 tctcatatgc 196  Q
     |||||||||    
T  40611417 cctcatatgc 40611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 313
Target Start/End: Complemental strand, 19183184 - 19182992
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcac 220  Q
    ||||||||||||| | ||||  ||  ||||| | |||||||||||||||||||||||||| |||||  |||||  || ||| |   ||||||||||||||    
T  19183184 ggatattgattttcgattcagagagcaaagtcaccattttttactttcactttagtccatatgacacgtcatactccttgttagcgtgccacatcatcac 19183085  T
Q  221 ttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||||| | |   ||||   || ||||||||||||||||||||||| ||||||||  ||||| || ||||||||||||| | || ||||||||    
T  19183084 ttaacatatttttttaatcgcaaggactaaagtgataacggaagtgtagagtcaggaacttatttgtatttaatcctgagtcagagacctatg 19182992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 87 - 312
Target Start/End: Complemental strand, 544905 - 544691
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| || ||||| ||||||||| || |||||||||||||||||| | ||  || |||  ||||| ||||||||||||  ||| |||||||    
T  544905 atttagggatttaggaatttgatattcaatttgggaatattgatttttggttcaggaacccaaatgactattttctactttcactttgatccctgtgaca 544806  T
Q  187 tctcatatgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaatta 286  Q
     |||||||||           ||||||| ||||||||||| | |   |||| |||||  |||||| | ||||||||||||||||||||| |||||| ||     
T  544805 cctcatatgc-----------gccacataatcacttaacatatttttttaatgtcagaaactaaatttataacggaagtgcagagtcagtgacttatttg 544717  T
Q  287 tatttaatcctgaattagggacctat 312  Q
    ||||||||||||| | || |||||||    
T  544716 tatttaatcctgagtcagagacctat 544691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 94 - 299
Target Start/End: Original strand, 4593974 - 4594166
Alignment:
Q  94 gatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcata 193  Q
    |||||| || ||||| ||||||||| || |||||||||||||||||||||||||   ||| |||||| |||||||||||| |||| ||||||| ||||||    
T  4593974 gatttaggaatttgatattcaatttgggaatattgatttttggttcatggactacgatgaccattttctactttcactttggtccctgtgacacctcata 4594073  T
Q  194 tgccatgtcactatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaa 293  Q
    |||           ||||||||||||||||||| |     ||||||| ||||| | ||||||||| |||||||||||||||  |||||| || |||||||    
T  4594074 tgc-----------gccacatcatcacttaacagatctttttaacgtaaggga-ttaagtgataatggaagtgcagagtca-tgacttatttgtatttaa 4594160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 13651041 - 13651107
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacat 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||||||    
T  13651041 ggatattgattttcggttcagggactaaagtgaccattttttactttcactttagtccctgtgacat 13651107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 34173537 - 34173440
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtga 184  Q
    |||||||||||||    ||||| ||||||||| |||||||||||||||||||||  ||| |||||||||||||| |||||||| |||||||| |||||    
T  34173537 atttagggatttagtgatttgaaattcaatttggggatattgatttttggttcagagaccaaagtgatcattttctactttcagtttagtccctgtga 34173440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 312
Target Start/End: Original strand, 9537945 - 9538129
Alignment:
Q  137 ttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcac---------tatgccacatcatcacttaacaa 227  Q
    |||| |||| ||||||| |||||| ||||||||||||||||||||||| |  ||||||| ||| |||          | || ||||| |||||||||||     
T  9537945 ttcagggaccaaagtgaccattttatactttcactttagtccatgtgaaacatcatatgtcatatcatcgtaaaacatgtgtcacataatcacttaacat 9538044  T
Q  228 aataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctat 312  Q
    ||| | ||||| |||| ||||||| |||||||||||||||| | ||||||||||  || ||||||||||||| | ||||||||||    
T  9538045 aattatttaacatcagagactaaaatgataacggaagtgcacaatcagagacttctttgtatttaatcctgagtcagggacctat 9538129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 297
Target Start/End: Complemental strand, 18004898 - 18004696
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||| ||||||||| |||||||||| ||||| |||| |||| |||||||  ||||| |||||||| |||||||  ||||||| |||| ||||| |||||    
T  18004898 tttgatattcaatttggggatattgaattttgattcagggaccaaagtgactattttctactttcattttagtctctgtgacacctcacatgccttgtca 18004799  T
Q  204 c---------tatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
              |||  | ||| ||||||||||| ||  | ||||| |||| |||||||||||||||||||||||||||||| |||| |  || ||||||||    
T  18004798 tcgtacaacttatatcgcattatcacttaacataactatttaacatcagagactaaagtgataacggaagtgcagagtcatagacctctttgtatttaat 18004699  T
Q  295 cct 297  Q
    |||    
T  18004698 cct 18004696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 14890008 - 14889917
Alignment:
Q  105 ttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgc 196  Q
    |||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||| ||||| |||| | ||||| |||||||||    
T  14890008 ttgatattcaatttgggcatattgatttttggttcagggaccaaagtgaccattttctacttttactttggtccctatgacacctcatatgc 14889917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 16611865 - 16611770
Alignment:
Q  218 cacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||||| | |||||| |||  || ||||||||||||| | || ||||||||    
T  16611865 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagaggcttctttgtatttaatcctgagtcagagacctatg 16611770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 294
Target Start/End: Original strand, 31946933 - 31947099
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcac 220  Q
    ||||||||||||| | |||| |||| ||||||| ||||||||||||||||||||||||| || | | |||||      |||||   ||||||||||||||    
T  31946933 ggatattgattttcgattcagggaccaaagtgaccattttttactttcactttagtccacgtaata-ctcat------tgtcagcgtgccacatcatcac 31947025  T
Q  221 ttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
    |||||| | |   |||||  ||| |||||||||||||||||||||  ||||||| ||||||  || ||||||||    
T  31947026 ttaacatatttttttaacagcagtgactaaagtgataacggaagtctagagtcatagacttgtttgtatttaat 31947099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 16611932 - 16611875
Alignment:
Q  120 gggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtc 177  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||    
T  16611932 gggatattgatttttggttcagggattaaagtgatcattttctacattcactttagtc 16611875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 28589939 - 28589847
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgc 196  Q
    ||||| ||||||||| || |||||||||||||||||| |||| ||||||| |||||| |||||| ||||| |||| | ||||  |||||||||    
T  28589939 tttgatattcaattttggtatattgatttttggttcagggaccaaagtgaccattttctacttttactttggtccctatgacccctcatatgc 28589847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 12445284 - 12445362
Alignment:
Q  108 agattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| ||||||||||||| ||||| | |   ||||||||||||| |||||| ||||||||||||||||||    
T  12445284 agatttaatttagagatattgattttttgttcaggtatcgaagtgatcattttctacttttactttagtccatgtgaca 12445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 37072799 - 37072730
Alignment:
Q  123 atattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    ||||||||||| |||||| ||||||||||||  ||||| |||||||| ||| |||||||||||| |||||    
T  37072799 atattgattttcggttcagggactaaagtgactattttctactttcattttggtccatgtgacacctcat 37072730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 21069437 - 21069345
Alignment:
Q  207 tgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctga 299  Q
    ||||||||||||||||||||||||   |||||| ||   | |||||||| ||| ||||||||||||||  |||||| || |||||||||||||    
T  21069437 tgccacatcatcacttaacaaaattttttaacggcatatattaaagtgaaaacagaagtgcagagtcaaggacttatttgtatttaatcctga 21069345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 18400438 - 18400339
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca 203  Q
    ||||||||| || || ||||||||| |||||| || | | | ||||||| ||||||| ||||||| ||||| ||||||||||| || ||||| |||||||    
T  18400438 tttgagatttaagttggggatattgttttttgatttaggaattaaagtggtcattttctactttcgctttactccatgtgacacctgatatgtcatgtca 18400339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 14881056 - 14881020
Alignment:
Q  246 actaaagtgataacggaagtgcagagtcagagactta 282  Q
    |||||||||||||||||||||||||||||| ||||||    
T  14881056 actaaagtgataacggaagtgcagagtcagggactta 14881020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 19271661 - 19271737
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccat 180  Q
    ||||| |||||| || | |||||||||||| |||| | |||  ||| |||||||||| |||||||||||||||||||    
T  19271661 tttgaaattcaacttggagatattgattttcggtttagggatcaaaatgatcattttctactttcactttagtccat 19271737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 312
Target Start/End: Complemental strand, 13483126 - 13483063
Alignment:
Q  249 aaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctat 312  Q
    |||||||||||| ||||||||||| ||||||||  |||||||||||| ||| | ||| ||||||    
T  13483126 aaagtgataacgaaagtgcagagtaagagacttctttatatttaatcatgagtcaggaacctat 13483063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 19271603 - 19271528
Alignment:
Q  104 tttgagattcaatttagggatattgatttttg-gttcatggactaaagtgatcattttttactttcactttagtcc 178  Q
    ||||| ||| ||||| |||||||||| ||||  ||||| ||||||||||||  ||||| |||||||||||||||||    
T  19271603 tttgatatttaatttggggatattgaattttcagttcagggactaaagtgacaattttctactttcactttagtcc 19271528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 32555461 - 32555498
Alignment:
Q  156 attttttactttcactttagtccatgtgacatctcata 193  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  32555461 attttctactttcactttagtccatgtgacacctcata 32555498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 40612499 - 40612528
Alignment:
Q  76 aattagatgatatttagggatttaagattt 105  Q
    ||||||||||||||||||||||||||||||    
T  40612499 aattagatgatatttagggatttaagattt 40612528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 13483174 - 13483218
Alignment:
Q  250 aagtgataacggaagtgcagagtcagagacttaattatatttaat 294  Q
    ||||||||||||||||||| ||||||||||||  || ||||||||    
T  13483174 aagtgataacggaagtgcaaagtcagagacttgtttgtatttaat 13483218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 281
Target Start/End: Original strand, 31239833 - 31240036
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||||| | || ||||||| |||||| |||||| |||||||| |||||||||    
T  31239833 atttagggatttaaggatttgagattcaatttggggatattgatttttggttcaagaacaaaagtgaccattttctactttgactttagttcatgtgaca 31239932  T
Q  187 tctcatatgccatgtca---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagag 277  Q
     || ||||| |||||||          | || ||||||||||||||||| ||| | |||||||| ||||| ||| ||||||||||| |||||||||||||    
T  31239933 ccttatatgtcatgtcatcgtaaaatatgtgtcacatcatcacttaacagaatcatttaacgtctgggacgaaaatgataacggaaatgcagagtcagag 31240032  T
Q  278 actt 281  Q
    ||||    
T  31240033 actt 31240036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 313
Target Start/End: Complemental strand, 30748233 - 30748041
Alignment:
Q  121 ggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtcactatgccacatcatcac 220  Q
    ||||||||||||||| |||| |||| ||| ||| |||||||||||||||||||||||| |||||||  |||||  || |||||   ||||||||||||||    
T  30748233 ggatattgatttttgattcagggaccaaattgaccattttttactttcactttagtccctgtgacacgtcatactccttgtcagcgtgccacatcatcac 30748134  T
Q  221 ttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||| |   |   |||||| ||| |||||||||||||||| ||||| ||||||||||||||  || ||||||||||| | | |||||||||||    
T  30748133 ttaatagttttttttaacggcagcgactaaagtgataacgaaagtgtagagtcagagacttgtttgtatttaatcctaagtcagggacctatg 30748041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 23508093 - 23507990
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacc 309  Q
    ||||| |||||||||||||| || |||||| |||||||||||||||||| ||||||| | ||||| ||| ||  || ||||||||||||||| ||| |||    
T  23508093 cacattatcacttaacaaaaaaatttaacgacagggactaaagtgataaaggaagtgtaaagtcatagatttgtttgtatttaatcctgaatcaggaacc 23507994  T
Q  310 tatg 313  Q
    ||||    
T  23507993 tatg 23507990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 19600097 - 19600195
Alignment:
Q  93 ggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    ||||||| || | |||||||||||||||||||||| ||||| | || | |||| ||||||| |||||| ||||||||||||||||| |||||||| ||||    
T  19600097 ggatttaggaatctgagattcaatttagggatattaattttcgattta-ggaccaaagtgaccattttctactttcactttagtccctgtgacatttcat 19600195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 31219076 - 31218997
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||| ||||||| ||||||||||||||||||||||||||||  ||||  || ||||||||||||| ||| |||||||||    
T  31219076 ttaacatcagggattaaagtgataacggaagtgcagagtcaggaacttctttgtatttaatcctgagttaaggacctatg 31218997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 6468733 - 6468793
Alignment:
Q  123 atattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtg 183  Q
    |||||||||||||||||| | || ||| |||||||||| ||||||||||||| ||||||||    
T  6468733 atattgatttttggttcaagaaccaaattgatcattttctactttcactttaatccatgtg 6468793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 31219098 - 31219142
Alignment:
Q  139 catggactaaagtgatcattttttactttcactttagtccatgtg 183  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||    
T  31219098 catggactaaagtgaccattttctactttcactttagtccatgtg 31219142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 259
Target Start/End: Complemental strand, 10856036 - 10855902
Alignment:
Q  129 atttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcatatgccatgtca---------ctatgccacatcatca 219  Q
    |||| ||||||| |||||||||||| |||||| ||||||||||||     |||||||| ||||||||||||||||          | || ||||| ||||    
T  10856036 atttatggttcaaggactaaagtgaacattttctactttcacttt-----atgtgacacctcatatgccatgtcatcgtaaaacttgtgtcacatgatca 10855942  T
Q  220 cttaacaaaataacttaacgtcagggactaaagtgataac 259  Q
    ||||||| ||| | ||||||||||||||||||| ||||||    
T  10855941 cttaacataattatttaacgtcagggactaaagcgataac 10855902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 31219162 - 31219241
Alignment:
Q  234 ttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    |||||||||| ||||||||||||||||||||||  |||||||  ||||  || ||||||||||||| |||  ||||||||    
T  31219162 ttaacgtcagagactaaagtgataacggaagtgtcgagtcaggaacttctttgtatttaatcctgagttaatgacctatg 31219241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 5265411 - 5265370
Alignment:
Q  151 tgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    |||| ||||||||||||||||||| ||||||||||| |||||    
T  5265411 tgattattttttactttcactttactccatgtgacacctcat 5265370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 6752643 - 6752692
Alignment:
Q  214 tcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaa 263  Q
    ||||||||| | ||||| | |||||||||| |||||||||||||||||||    
T  6752643 tcatcacttgataaaattatttaacgtcagagactaaagtgataacggaa 6752692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 24940542 - 24940477
Alignment:
Q  211 acatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcaga 276  Q
    |||||||||||||||| ||| | ||||||  ||  ||||||||||| | |||||||||||||||||    
T  24940542 acatcatcacttaacataattatttaacgctagaaactaaagtgatgaaggaagtgcagagtcaga 24940477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 79350 - 79115
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||| ||||||| || || ||||||||||||||| ||||||||||||  |||| |||| |||||||||||||| | |||||| |||||||| ||||| |    
T  79350 atttaaggatttaggaattcgagattcaatttaggcatattgattttttattcagggaccaaagtgatcattttcttctttcattttagtccctgtgaga 79251  T
Q  187 tctcatatgccatgtca---------ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagag 277  Q
     |||||||| |||||||          | || ||||||||||||||||||||| | |||||||||  ||||||||||||| |||| ||||| |||||  |    
T  79250 cctcatatgtcatgtcatcgtaaaacatgtgtcacatcatcacttaacaaaattatttaacgtcaaagactaaagtgatatcggaggtgcaaagtcaagg 79151  T
Q  278 acttaattatatttaatcctgaattagggacctatg 313  Q
    ||||  || ||||||||| ||| | | |||||||||    
T  79150 acttctttttatttaatcatgagtcaaggacctatg 79115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 79661 - 79746
Alignment:
Q  210 cacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatc 295  Q
    ||||||||||||||| ||||| | |||||||||  ||||||| ||||||  ||| |||||||||| ||||||  || |||||||||    
T  79661 cacatcatcacttaataaaattatttaacgtcaaagactaaaatgataatagaaatgcagagtcaaagacttctttgtatttaatc 79746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 299
Target Start/End: Complemental strand, 5885 - 5655
Alignment:
Q  76 aattagatgatatttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttag 175  Q
    |||||||||| ||||| ||| ||| |  ||||||||| |||||  |||||||||||||||||||| |||  ||||||| || ||||||||||||||||||    
T  5885 aattagatgacatttaaggaattagggatttgagatttaatttgaggatattgatttttggttcagggatcaaagtgaccactttttactttcactttag 5786  T
Q  176 tccatgtgacatctcat---atgccat-gtca---ctatgccacatcatcacttaacaaaataacttaacgtcagggactaaagtgataacggaagtgca 268  Q
    || |||||||| |||||   ||| ||| || |    | || | ||||||||| ||||| ||| | |||||| ||| |||||||||||||||||||||| |    
T  5785 tctatgtgacacctcatgtcatgtcatcgtaaaatatgtgtcgcatcatcacataacataattatttaacgccagagactaaagtgataacggaagtgta 5686  T
Q  269 gagtcagagacttaattatatttaatcctga 299  Q
    ||||||| |||||  || |||||||| ||||    
T  5685 gagtcagggacttctttgtatttaattctga 5655  T

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Target: scaffold0767; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 6099 - 6212
Alignment:
Q  87 atttagggatttaagattttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgaca 186  Q
    ||||||||||||| || |||||||||  |||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||   |||||||| ||    
T  6099 atttagggatttaggaatttgagattatatttggggatattgatttttggttcagggaccaaagtgaccattttttactttcactt---tccatgtgtca 6195  T
Q  187 tctcatatgccatgtca 203  Q
     |||||||| |||||||    
T  6196 cctcatatgtcatgtca 6212  T

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Target: scaffold0034 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 116170 - 116097
Alignment:
Q  240 tcagggactaaagtgataacggaagtgcagagtcagagacttaattatatttaatcctgaattagggacctatg 313  Q
    ||||||||||||||||||||||||||||| |||||| |||||| || ||||||||||||| | |||||||||||    
T  116170 tcagggactaaagtgataacggaagtgcatagtcagggacttatttgtatttaatcctgagtcagggacctatg 116097  T

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Target: scaffold0369 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 8759 - 8672
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttcactttagtccatgtgacatctcat 192  Q
    ||||||||| || || ||||||||||||||||||||| | | |||||||| |||| ||||||| ||||||| ||||||||||| |||||    
T  8759 tttgagatttaagttggggatattgatttttggttcacg-attaaagtgaacattctttacttccactttattccatgtgacacctcat 8672  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 36408 - 36473
Alignment:
Q  104 tttgagattcaatttagggatattgatttttggttcatggactaaagtgatcattttttactttca 169  Q
    |||||| ||||||||  ||||||||||||| |||||| |||  ||||||| |||||| ||||||||    
T  36408 tttgagtttcaattttaggatattgattttcggttcagggatcaaagtgaccattttctactttca 36473  T

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