View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17276_low_4 (Length: 278)
Name: NF17276_low_4
Description: NF17276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17276_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 26304123 - 26303865
Alignment:
| Q |
1 |
tgttttgaatcctgttaaaaaccattctgaaaagggtgtttgtgaatccaatgctactatgattgggttacatttacattaaccatacgtcactatgatt |
100 |
Q |
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| T |
26304123 |
tgttttgaatcctgttaaaaaccattctgaaaaaggtgtttgtgaatccaatgctactatgattgggttacatttacattaaccatacgtcactatgatt |
26304024 |
T |
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| Q |
101 |
atttgcaaaattaaatgtcatgacacatgaccaatttaattaaaacattatttggttggttctttaaattattattttttaatgacatgtttctttctac |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
26304023 |
atttgcgaaattaaatgtcatgacacatgaccaatttaattaaaacattatttggttggttctttaaattattattttttaatgacatgtttctttttac |
26303924 |
T |
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| Q |
201 |
agaaaaagctatgatggagatgaaataatcaagagcaggaaaaagctaagcgagttaat |
259 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26303923 |
agaaaaagctgtgatggagatgaaataatcaagagcaggaaaaagctaagcgagttaat |
26303865 |
T |
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