View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17277_high_162 (Length: 228)

Name: NF17277_high_162
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17277_high_162
NF17277_high_162
[»] chr6 (6 HSPs)
chr6 (1-92)||(11308235-11308328)
chr6 (166-228)||(11308445-11308507)
chr6 (34-89)||(11314008-11314063)
chr6 (91-121)||(11308370-11308400)
chr6 (37-83)||(11589355-11589401)
chr6 (34-79)||(607830-607875)
[»] chr5 (3 HSPs)
chr5 (27-83)||(19986878-19986934)
chr5 (40-83)||(2807991-2808034)
chr5 (37-81)||(3959690-3959734)
[»] chr3 (7 HSPs)
chr3 (24-83)||(43020020-43020079)
chr3 (39-83)||(43021651-43021695)
chr3 (24-83)||(37521841-37521900)
chr3 (28-83)||(8237726-8237781)
chr3 (34-89)||(8993660-8993715)
chr3 (24-83)||(24515987-24516046)
chr3 (36-83)||(36656897-36656944)
[»] chr1 (8 HSPs)
chr1 (24-83)||(10765748-10765807)
chr1 (24-89)||(5493263-5493328)
chr1 (23-83)||(3346028-3346088)
chr1 (24-83)||(5494131-5494191)
chr1 (39-98)||(12214989-12215049)
chr1 (39-83)||(38832845-38832889)
chr1 (39-82)||(14230477-14230520)
chr1 (24-89)||(5489564-5489629)
[»] chr4 (5 HSPs)
chr4 (34-83)||(2215691-2215740)
chr4 (39-83)||(30925380-30925424)
chr4 (24-83)||(35603202-35603262)
chr4 (39-89)||(30926008-30926058)
chr4 (24-83)||(24549965-24550025)
[»] chr7 (1 HSPs)
chr7 (39-83)||(43071726-43071770)
[»] chr2 (4 HSPs)
chr2 (27-83)||(38564615-38564671)
chr2 (24-75)||(27530233-27530284)
chr2 (29-84)||(44021780-44021835)
chr2 (39-75)||(34061324-34061360)
[»] chr8 (3 HSPs)
chr8 (24-83)||(4047529-4047588)
chr8 (24-89)||(41829481-41829547)
chr8 (39-83)||(24409222-24409266)
[»] scaffold0443 (1 HSPs)
scaffold0443 (24-70)||(6564-6610)
[»] scaffold0486 (1 HSPs)
scaffold0486 (34-83)||(1519-1568)


Alignment Details
Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11308235 - 11308328
Alignment:
Q  1 ttttgttcgaaaagagagattaaatat--atataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctacccc 92  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  11308235 ttttgttcgaaaagagagattaaatatatatataaggggttgctaacttactcccacttaaaaacacgaaggagtaagttagcaaatctacccc 11308328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 11308445 - 11308507
Alignment:
Q  166 aatgttgttgctgcttcccacgacaccgtttcccgttcttatgttttcgttttctcgttgttt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11308445 aatgttgttgctgcttcccacgacaccgtttcccgttcttatgttttcgttttctcgttgttt 11308507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 11314063 - 11314008
Alignment:
Q  34 ggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 89  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||    
T  11314063 ggggttgctaacttactctcacctaaaaatatgaaagagtaagttagcaagtctac 11314008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 121
Target Start/End: Original strand, 11308370 - 11308400
Alignment:
Q  91 ccactagtttaatgaatgaacataattgtaa 121  Q
    |||||||||||||||||||||||||||||||    
T  11308370 ccactagtttaatgaatgaacataattgtaa 11308400  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 11589401 - 11589355
Alignment:
Q  37 gttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    |||| |||||||||| ||| |||||| ||||||||||||||||||||    
T  11589401 gttgttaacttactcccacctaaaaacatgaaggagtaagttagcaa 11589355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 607830 - 607875
Alignment:
Q  34 ggggttgctaacttactctcacttaaaaatatgaaggagtaagtta 79  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||    
T  607830 ggggttgctaacttactctcacctaaaaacgtgaaagagtaagtta 607875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 19986934 - 19986878
Alignment:
Q  27 tatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    |||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  19986934 tatatagggggttgctaacttactcccacctaaaaacatgaaggagtaagttagcaa 19986878  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 2807991 - 2808034
Alignment:
Q  40 gctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    |||||||||||||||| |||||| | ||||||||||||||||||    
T  2807991 gctaacttactctcacctaaaaacacgaaggagtaagttagcaa 2808034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 3959734 - 3959690
Alignment:
Q  37 gttgctaacttactctcacttaaaaatatgaaggagtaagttagc 81  Q
    ||||||||||||||| |||  ||||| ||||||||||||||||||    
T  3959734 gttgctaacttactcccaccaaaaaacatgaaggagtaagttagc 3959690  T

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Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 43020020 - 43020079
Alignment:
Q  24 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||| |||| ||||||||||||| ||| |||||| ||||||||||||||||||||    
T  43020020 atatatatatggggctgctaacttactcccacctaaaaacatgaaggagtaagttagcaa 43020079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 43021695 - 43021651
Alignment:
Q  39 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  43021695 tgctaacttactcccacttaaaaacatgaaggagtaagttagcaa 43021651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 37521841 - 37521900
Alignment:
Q  24 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||| |||| ||||||||||||| |||  ||||| ||||||||||||||||||||    
T  37521841 atatatatatggggctgctaacttactcccacccaaaaacatgaaggagtaagttagcaa 37521900  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 8237726 - 8237781
Alignment:
Q  28 atataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||| |||| || |||||||||| ||| ||||||||||||||| |||||||||||    
T  8237726 atatagggggctgttaacttactcccacctaaaaatatgaaggaataagttagcaa 8237781  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 8993660 - 8993715
Alignment:
Q  34 ggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 89  Q
    |||||||||||||||||||||   ||||  |||||||||||||||||||| |||||    
T  8993660 ggggttgctaacttactctcatccaaaatcatgaaggagtaagttagcaagtctac 8993715  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 24515987 - 24516046
Alignment:
Q  24 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||| |||||||||||||||||| |||  |||||||||||| ||  |||||||||    
T  24515987 atatatatatggggttgctaacttactcacacccaaaaatatgaagaagcgagttagcaa 24516046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 36656944 - 36656897
Alignment:
Q  36 ggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||| |||||||||||||| |||||| |||||| |||||||||||||    
T  36656944 ggttgttaacttactctcacctaaaaacatgaagaagtaagttagcaa 36656897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 10765748 - 10765807
Alignment:
Q  24 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||| |||| ||||||||||||| ||| |||||| ||||||||||||||||||||    
T  10765748 atatatatatggggctgctaacttactcccacctaaaaacatgaaggagtaagttagcaa 10765807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 5493263 - 5493328
Alignment:
Q  24 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 89  Q
    ||||||||| |||| |||||||||||||  ||  |||||||||||| ||||||||||||| |||||    
T  5493263 atatatatatggggctgctaacttactccaacccaaaaatatgaagcagtaagttagcaagtctac 5493328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 3346028 - 3346088
Alignment:
Q  23 aatatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||||  ||| |||||||||| || ||| |||||| ||||||||||||||||||||    
T  3346028 aatatatatagagggctgctaacttagtcccacctaaaaacatgaaggagtaagttagcaa 3346088  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 5494191 - 5494131
Alignment:
Q  24 atatatata-aggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||| |||||||||||||||| || |||  ||||| ||||||||||||||||||||    
T  5494191 atatatatataggggttgctaacttattcccacccaaaaacatgaaggagtaagttagcaa 5494131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 12214989 - 12215049
Alignment:
Q  39 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac-cccactagt 98  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||||| ||||| |||||||||    
T  12214989 tgctaacttactcccactcaaaaacatgatggagtaagttagcaactctactcccactagt 12215049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 38832845 - 38832889
Alignment:
Q  39 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||    
T  38832845 tgctaacttactcccacctaaaaacatgaaggagtaagttagcaa 38832889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 14230520 - 14230477
Alignment:
Q  39 tgctaacttactctcacttaaaaatatgaaggagtaagttagca 82  Q
    ||||||||||||  || |||||||||||||||||||||||||||    
T  14230520 tgctaacttactaccaattaaaaatatgaaggagtaagttagca 14230477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 5489564 - 5489629
Alignment:
Q  24 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 89  Q
    ||||||||| |||| ||||||| |||||  |   |||||||||||||||||||||||||| |||||    
T  5489564 atatatatagggggctgctaacctactccaatccaaaaatatgaaggagtaagttagcaagtctac 5489629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 2215740 - 2215691
Alignment:
Q  34 ggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    |||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  2215740 ggggttgctaacttactctcacctaaaaatacgaaggagtaagctagcaa 2215691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 30925380 - 30925424
Alignment:
Q  39 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||    
T  30925380 tgctaacttactcccacctaaaaatattaaggagtaagttagcaa 30925424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 35603262 - 35603202
Alignment:
Q  24 atatatataaggggtt-gctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||| |||||| |||||||||||| |||  ||||| ||||||||||||||||||||    
T  35603262 atatatatatggggtttgctaacttactcccacccaaaaacatgaaggagtaagttagcaa 35603202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 30926058 - 30926008
Alignment:
Q  39 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 89  Q
    ||||||||||||| ||  |||||| |||||||||||||||||||| |||||    
T  30926058 tgctaacttactcccatctaaaaacatgaaggagtaagttagcaagtctac 30926008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 24550025 - 24549965
Alignment:
Q  24 atatatata-aggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||| ||||| |||||||||| || |||| ||||| ||||| ||||||||||||||    
T  24550025 atatatatataggggctgctaacttagtcccactcaaaaacatgaatgagtaagttagcaa 24549965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 43071770 - 43071726
Alignment:
Q  39 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||    
T  43071770 tgctaacttactctcacccaaaaacatgaaggagtaagttagcaa 43071726  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 38564671 - 38564615
Alignment:
Q  27 tatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    |||||| |||| ||||||||||||  ||| |||||| ||||||||||||||||||||    
T  38564671 tatatagggggatgctaacttacttccacctaaaaacatgaaggagtaagttagcaa 38564615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 27530284 - 27530233
Alignment:
Q  24 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaa 75  Q
    ||||||||| |||||||||||||||||| |||  ||||| ||||||||||||    
T  27530284 atatatatatggggttgctaacttactcccacccaaaaacatgaaggagtaa 27530233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 44021835 - 44021780
Alignment:
Q  29 tataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaa 84  Q
    |||| |||| ||| ||||||| | ||| ||||||||||||||||||||||||||||    
T  44021835 tatagggggctgccaacttacacccacctaaaaatatgaaggagtaagttagcaaa 44021780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 34061324 - 34061360
Alignment:
Q  39 tgctaacttactctcacttaaaaatatgaaggagtaa 75  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  34061324 tgctaacttactcacactgaaaaatatgaaggagtaa 34061360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 4047529 - 4047588
Alignment:
Q  24 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||| |||| || |||||||| ||||||||||||||| |||| | ||||||||||    
T  4047529 atatatatatggggctgttaacttacactcacttaaaaatattaaggtgcaagttagcaa 4047588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 41829547 - 41829481
Alignment:
Q  24 atatatataaggggttgctaacttactctcactt-aaaaatatgaaggagtaagttagcaaatctac 89  Q
    ||||||||| || | |||||||||||||||||   ||||| |||||||||||||||||||| |||||    
T  41829547 atatatatagggagctgctaacttactctcaccccaaaaacatgaaggagtaagttagcaagtctac 41829481  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 24409222 - 24409266
Alignment:
Q  39 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||||||||||| |||  ||||| ||||||||||||||||||||    
T  24409222 tgctaacttactcccacccaaaaacatgaaggagtaagttagcaa 24409266  T

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Target: scaffold0443 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 6610 - 6564
Alignment:
Q  24 atatatataaggggttgctaacttactctcacttaaaaatatgaagg 70  Q
    ||||||||| ||||||||||||||||||||||  ||||| |||||||    
T  6610 atatatatagggggttgctaacttactctcacaaaaaaacatgaagg 6564  T

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Target: scaffold0486 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 1568 - 1519
Alignment:
Q  34 ggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 83  Q
    ||||| |||||||||||| |||  ||||| ||||||||||||||||||||    
T  1568 ggggtggctaacttactcgcacccaaaaagatgaaggagtaagttagcaa 1519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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