View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17277_low_1 (Length: 1009)

Name: NF17277_low_1
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17277_low_1
NF17277_low_1
[»] chr3 (52 HSPs)
chr3 (33-764)||(37023695-37024401)
chr3 (796-995)||(37023425-37023624)
chr3 (591-764)||(45580107-45580279)
chr3 (815-929)||(45580371-45580486)
chr3 (592-736)||(2213922-2214066)
chr3 (585-759)||(6247377-6247551)
chr3 (616-759)||(50296230-50296373)
chr3 (589-737)||(45583170-45583317)
chr3 (592-708)||(50297253-50297369)
chr3 (938-995)||(7652592-7652649)
chr3 (938-995)||(9990130-9990187)
chr3 (930-995)||(36468798-36468863)
chr3 (590-699)||(37087111-37087220)
chr3 (928-993)||(52307445-52307510)
chr3 (930-986)||(20962620-20962676)
chr3 (614-737)||(38262255-38262376)
chr3 (590-708)||(6248394-6248513)
chr3 (602-737)||(40630538-40630673)
chr3 (591-742)||(52986152-52986308)
chr3 (929-986)||(2357903-2357960)
chr3 (929-986)||(11257846-11257903)
chr3 (588-737)||(38261301-38261450)
chr3 (930-995)||(48167553-48167618)
chr3 (591-699)||(37088111-37088217)
chr3 (597-708)||(17341439-17341550)
chr3 (591-738)||(52985129-52985276)
chr3 (938-995)||(8626358-8626416)
chr3 (938-995)||(10385439-10385497)
chr3 (938-995)||(23383039-23383097)
chr3 (938-995)||(22098715-22098772)
chr3 (930-995)||(33248724-33248789)
chr3 (938-994)||(27849921-27849977)
chr3 (644-742)||(54578807-54578904)
chr3 (930-995)||(4742364-4742429)
chr3 (581-737)||(40630007-40630163)
chr3 (938-995)||(23397030-23397088)
chr3 (634-719)||(1834858-1834943)
chr3 (615-684)||(8339152-8339221)
chr3 (615-668)||(8542633-8542686)
chr3 (611-666)||(11430817-11430872)
chr3 (614-668)||(33279812-33279866)
chr3 (670-731)||(3266434-3266495)
chr3 (594-659)||(9434447-9434512)
chr3 (615-668)||(27852979-27853032)
chr3 (930-986)||(27104766-27104822)
chr3 (616-668)||(46673275-46673326)
chr3 (629-668)||(22416369-22416408)
chr3 (629-668)||(22500823-22500861)
chr3 (614-668)||(23428847-23428901)
chr3 (615-661)||(37021892-37021938)
chr3 (615-668)||(22447972-22448025)
chr3 (615-668)||(26628253-26628306)
[»] chr8 (55 HSPs)
chr8 (591-764)||(14054117-14054288)
chr8 (594-764)||(35562246-35562413)
chr8 (815-929)||(14054382-14054498)
chr8 (590-736)||(39688900-39689045)
chr8 (591-738)||(28301343-28301490)
chr8 (582-719)||(28301580-28301716)
chr8 (590-756)||(6571324-6571490)
chr8 (591-719)||(26830324-26830451)
chr8 (591-736)||(45519406-45519549)
chr8 (591-730)||(39688341-39688480)
chr8 (590-749)||(45518166-45518325)
chr8 (590-737)||(6572345-6572494)
chr8 (592-737)||(23753259-23753404)
chr8 (615-759)||(23754267-23754410)
chr8 (591-761)||(26831333-26831501)
chr8 (591-708)||(39581940-39582057)
chr8 (938-995)||(8742653-8742710)
chr8 (938-995)||(9067537-9067594)
chr8 (938-995)||(11308357-11308414)
chr8 (938-995)||(41576701-41576758)
chr8 (590-667)||(45021630-45021707)
chr8 (590-698)||(1192066-1192174)
chr8 (928-995)||(3299536-3299603)
chr8 (615-698)||(41774730-41774812)
chr8 (938-995)||(22181311-22181368)
chr8 (938-995)||(27348761-27348818)
chr8 (585-737)||(36984139-36984288)
chr8 (591-718)||(14055384-14055511)
chr8 (936-995)||(28925510-28925570)
chr8 (591-667)||(41944354-41944430)
chr8 (940-995)||(34006145-34006200)
chr8 (595-708)||(39580795-39580907)
chr8 (592-667)||(45020585-45020660)
chr8 (930-995)||(13848689-13848754)
chr8 (930-995)||(16959286-16959350)
chr8 (591-668)||(44296719-44296796)
chr8 (938-993)||(16583113-16583169)
chr8 (592-698)||(1190969-1191074)
chr8 (614-736)||(4376206-4376327)
chr8 (593-666)||(44066714-44066786)
chr8 (581-737)||(26363508-26363662)
chr8 (590-668)||(22255572-22255649)
chr8 (938-991)||(28370832-28370886)
chr8 (592-718)||(35563418-35563542)
chr8 (590-668)||(36985282-36985360)
chr8 (588-666)||(44065483-44065561)
chr8 (629-668)||(18881729-18881768)
chr8 (629-668)||(23565158-23565197)
chr8 (591-654)||(41767546-41767608)
chr8 (616-668)||(7117341-7117393)
chr8 (615-668)||(8802627-8802680)
chr8 (585-654)||(10442279-10442348)
chr8 (615-668)||(19924288-19924341)
chr8 (615-668)||(21930030-21930082)
chr8 (602-635)||(23410074-23410107)
[»] chr1 (42 HSPs)
chr1 (591-731)||(1531634-1531774)
chr1 (591-736)||(22778552-22778696)
chr1 (591-737)||(31376528-31376674)
chr1 (591-667)||(16273729-16273805)
chr1 (591-708)||(24037902-24038017)
chr1 (581-737)||(1532485-1532642)
chr1 (938-995)||(9667066-9667123)
chr1 (938-995)||(39000551-39000608)
chr1 (930-995)||(40999466-40999531)
chr1 (928-984)||(11738158-11738214)
chr1 (591-667)||(16276948-16277023)
chr1 (585-708)||(5971079-5971202)
chr1 (616-719)||(5972193-5972296)
chr1 (615-737)||(24033066-24033188)
chr1 (938-995)||(33491568-33491625)
chr1 (614-719)||(43914929-43915032)
chr1 (930-986)||(16131245-16131301)
chr1 (948-995)||(12167596-12167643)
chr1 (593-708)||(29183398-29183512)
chr1 (938-995)||(431710-431768)
chr1 (929-995)||(13217409-13217475)
chr1 (930-995)||(16832145-16832210)
chr1 (938-995)||(38121302-38121359)
chr1 (930-986)||(20225724-20225780)
chr1 (617-720)||(16355485-16355587)
chr1 (615-737)||(31377587-31377707)
chr1 (591-719)||(30105433-30105561)
chr1 (938-991)||(49249802-49249856)
chr1 (591-708)||(52142868-52142984)
chr1 (615-666)||(43600928-43600979)
chr1 (614-668)||(2425247-2425301)
chr1 (930-979)||(25242563-25242612)
chr1 (664-708)||(18964837-18964881)
chr1 (630-705)||(22776540-22776614)
chr1 (591-654)||(24032032-24032095)
chr1 (593-668)||(30107044-30107118)
chr1 (651-753)||(16356603-16356704)
chr1 (614-668)||(28920879-28920933)
chr1 (615-668)||(3616822-3616875)
chr1 (592-653)||(5108693-5108754)
chr1 (930-983)||(13831016-13831069)
chr1 (611-668)||(22786050-22786106)
[»] chr4 (61 HSPs)
chr4 (590-736)||(22812631-22812776)
chr4 (594-739)||(52035061-52035206)
chr4 (591-730)||(22813207-22813346)
chr4 (594-756)||(52034154-52034316)
chr4 (590-737)||(10616001-10616148)
chr4 (591-756)||(40872954-40873120)
chr4 (590-742)||(18704316-18704469)
chr4 (614-759)||(34370656-34370801)
chr4 (592-761)||(49700607-49700774)
chr4 (930-995)||(4838498-4838563)
chr4 (593-737)||(6047064-6047207)
chr4 (590-682)||(18705361-18705453)
chr4 (592-667)||(56113738-56113813)
chr4 (938-995)||(5272933-5272990)
chr4 (930-995)||(21668266-21668331)
chr4 (930-995)||(21677030-21677095)
chr4 (938-995)||(22048416-22048473)
chr4 (930-995)||(35416058-35416123)
chr4 (579-719)||(49700402-49700541)
chr4 (591-667)||(56112694-56112770)
chr4 (602-737)||(1961083-1961218)
chr4 (635-750)||(22098967-22099082)
chr4 (936-995)||(33239651-33239710)
chr4 (594-737)||(40841995-40842138)
chr4 (616-707)||(40843073-40843164)
chr4 (591-692)||(18703216-18703318)
chr4 (930-995)||(55327506-55327571)
chr4 (930-986)||(26372993-26373049)
chr4 (930-986)||(52619246-52619302)
chr4 (581-708)||(34369653-34369779)
chr4 (938-995)||(44428759-44428817)
chr4 (927-995)||(19730879-19730947)
chr4 (616-736)||(46171390-46171507)
chr4 (595-708)||(31182620-31182734)
chr4 (615-761)||(39701546-39701691)
chr4 (591-668)||(1960894-1960971)
chr4 (590-695)||(2420926-2421030)
chr4 (930-995)||(40994909-40994974)
chr4 (930-986)||(1188708-1188764)
chr4 (592-668)||(18667298-18667374)
chr4 (586-708)||(10614797-10614915)
chr4 (614-737)||(40873970-40874092)
chr4 (593-668)||(46170300-46170374)
chr4 (938-995)||(324173-324231)
chr4 (930-995)||(26070462-26070527)
chr4 (591-668)||(34155897-34155973)
chr4 (689-749)||(7035809-7035869)
chr4 (930-986)||(30217749-30217804)
chr4 (612-654)||(51291006-51291048)
chr4 (615-668)||(2419675-2419728)
chr4 (615-668)||(25618824-25618877)
chr4 (616-683)||(39702629-39702694)
chr4 (930-986)||(46691400-46691455)
chr4 (616-668)||(55780411-55780463)
chr4 (616-668)||(55844591-55844643)
chr4 (635-718)||(16217232-16217315)
chr4 (930-985)||(20949492-20949546)
chr4 (629-668)||(41034673-41034712)
chr4 (630-668)||(13397903-13397941)
chr4 (930-995)||(19247190-19247256)
chr4 (614-668)||(25011757-25011811)
[»] chr2 (45 HSPs)
chr2 (590-719)||(42700948-42701077)
chr2 (614-759)||(3453357-3453502)
chr2 (591-708)||(20126184-20126301)
chr2 (930-995)||(8679157-8679222)
chr2 (592-749)||(30796142-30796299)
chr2 (590-719)||(20127282-20127411)
chr2 (591-667)||(27848335-27848411)
chr2 (610-736)||(30793863-30793990)
chr2 (930-995)||(31759013-31759078)
chr2 (930-995)||(42700336-42700401)
chr2 (591-699)||(27849335-27849442)
chr2 (589-712)||(3627612-3627735)
chr2 (930-993)||(13229704-13229767)
chr2 (602-708)||(26068901-26069007)
chr2 (932-986)||(28006828-28006882)
chr2 (591-668)||(24607761-24607838)
chr2 (602-667)||(33076237-33076302)
chr2 (930-995)||(36556924-36556989)
chr2 (591-708)||(42702058-42702175)
chr2 (929-986)||(43992256-43992313)
chr2 (614-708)||(3454386-3454481)
chr2 (938-993)||(36039632-36039687)
chr2 (930-995)||(9783634-9783699)
chr2 (930-995)||(14701379-14701444)
chr2 (930-979)||(27258135-27258184)
chr2 (930-995)||(28457239-28457304)
chr2 (930-986)||(23924394-23924450)
chr2 (930-986)||(24662489-24662545)
chr2 (592-667)||(33075186-33075260)
chr2 (938-995)||(29224449-29224507)
chr2 (938-995)||(29337748-29337806)
chr2 (928-995)||(36667248-36667315)
chr2 (669-731)||(21004565-21004627)
chr2 (929-979)||(32523681-32523731)
chr2 (612-719)||(3149155-3149259)
chr2 (615-742)||(3628018-3628146)
chr2 (615-668)||(9051255-9051308)
chr2 (629-668)||(9787597-9787635)
chr2 (629-668)||(30714502-30714541)
chr2 (587-666)||(34388018-34388097)
chr2 (615-668)||(11175930-11175983)
chr2 (611-664)||(11176139-11176192)
chr2 (615-668)||(18538056-18538109)
chr2 (595-708)||(34386869-34386982)
chr2 (615-668)||(38716217-38716269)
[»] chr6 (31 HSPs)
chr6 (589-719)||(20583014-20583144)
chr6 (592-708)||(20583917-20584032)
chr6 (590-698)||(15976610-15976718)
chr6 (591-737)||(20891805-20891951)
chr6 (930-995)||(8667666-8667731)
chr6 (614-742)||(14455050-14455178)
chr6 (930-995)||(32806125-32806190)
chr6 (583-698)||(14456144-14456258)
chr6 (929-983)||(14479848-14479902)
chr6 (592-698)||(26444808-26444914)
chr6 (930-995)||(21595890-21595955)
chr6 (590-654)||(15981014-15981078)
chr6 (591-730)||(21844279-21844417)
chr6 (615-698)||(26444509-26444592)
chr6 (930-995)||(5670638-5670704)
chr6 (930-995)||(9932166-9932232)
chr6 (938-993)||(3539784-3539840)
chr6 (632-764)||(21843189-21843321)
chr6 (930-986)||(24160616-24160672)
chr6 (938-993)||(16698646-16698701)
chr6 (929-995)||(25055918-25055984)
chr6 (930-986)||(6778299-6778355)
chr6 (930-993)||(26514789-26514853)
chr6 (591-736)||(3488033-3488174)
chr6 (930-984)||(15643149-15643203)
chr6 (670-764)||(19758319-19758413)
chr6 (595-708)||(646759-646871)
chr6 (591-668)||(4370897-4370974)
chr6 (615-668)||(18749356-18749409)
chr6 (615-668)||(25819708-25819761)
chr6 (651-731)||(29011543-29011623)
[»] chr7 (56 HSPs)
chr7 (588-724)||(35960130-35960264)
chr7 (591-719)||(17352889-17353016)
chr7 (592-738)||(40659219-40659364)
chr7 (591-708)||(7314191-7314308)
chr7 (615-708)||(17353815-17353908)
chr7 (579-737)||(42337058-42337214)
chr7 (591-708)||(16957203-16957320)
chr7 (930-995)||(2478395-2478460)
chr7 (595-724)||(4436052-4436180)
chr7 (938-995)||(8107258-8107315)
chr7 (938-995)||(10345676-10345733)
chr7 (930-995)||(12089821-12089886)
chr7 (938-995)||(19471604-19471661)
chr7 (938-995)||(23795828-23795885)
chr7 (930-995)||(31879333-31879398)
chr7 (592-728)||(8955972-8956108)
chr7 (938-995)||(2632131-2632188)
chr7 (938-995)||(6173250-6173307)
chr7 (616-724)||(47508872-47508978)
chr7 (591-695)||(46469140-46469244)
chr7 (931-986)||(31663875-31663930)
chr7 (930-995)||(12184594-12184660)
chr7 (938-995)||(22321170-22321228)
chr7 (929-991)||(22825347-22825409)
chr7 (938-995)||(31157645-31157703)
chr7 (591-736)||(35959080-35959226)
chr7 (614-730)||(37628473-37628585)
chr7 (592-666)||(42338134-42338208)
chr7 (590-719)||(40659002-40659130)
chr7 (930-985)||(12191586-12191642)
chr7 (592-708)||(12385430-12385545)
chr7 (583-646)||(40319542-40319605)
chr7 (944-986)||(2796939-2796981)
chr7 (588-682)||(12384089-12384183)
chr7 (638-736)||(40320459-40320555)
chr7 (591-756)||(47507759-47507922)
chr7 (615-668)||(19195441-19195494)
chr7 (929-980)||(3544239-3544290)
chr7 (592-654)||(7313071-7313133)
chr7 (592-736)||(37918439-37918579)
chr7 (933-986)||(4704755-4704808)
chr7 (685-742)||(12384386-12384443)
chr7 (615-684)||(41452461-41452530)
chr7 (601-753)||(1976917-1977068)
chr7 (616-668)||(11843405-11843457)
chr7 (591-667)||(40322535-40322611)
chr7 (591-654)||(42951494-42951557)
chr7 (614-668)||(13578012-13578066)
chr7 (940-986)||(45500083-45500129)
chr7 (614-668)||(48176190-48176244)
chr7 (615-668)||(19919829-19919882)
chr7 (615-668)||(20636642-20636695)
chr7 (615-668)||(20638514-20638567)
chr7 (930-983)||(24483491-24483543)
chr7 (615-668)||(24597743-24597796)
chr7 (615-668)||(46470418-46470471)
[»] chr5 (46 HSPs)
chr5 (588-708)||(42877022-42877143)
chr5 (592-750)||(5015027-5015184)
chr5 (591-737)||(2023331-2023474)
chr5 (591-737)||(5014017-5014163)
chr5 (590-708)||(12949999-12950117)
chr5 (590-668)||(38107138-38107216)
chr5 (930-995)||(16903971-16904036)
chr5 (590-751)||(29993321-29993481)
chr5 (591-737)||(2024209-2024354)
chr5 (938-995)||(9405159-9405216)
chr5 (938-995)||(11722646-11722703)
chr5 (930-995)||(27166460-27166525)
chr5 (938-995)||(30606446-30606503)
chr5 (938-995)||(34457030-34457087)
chr5 (939-995)||(14345195-14345251)
chr5 (938-993)||(33435339-33435394)
chr5 (616-737)||(183102-183221)
chr5 (589-667)||(4533130-4533207)
chr5 (592-761)||(28223553-28223721)
chr5 (929-991)||(31846685-31846747)
chr5 (938-995)||(7315939-7315996)
chr5 (595-756)||(9070677-9070836)
chr5 (938-991)||(24836461-24836514)
chr5 (591-719)||(12948880-12949008)
chr5 (614-708)||(12935841-12935936)
chr5 (930-984)||(6270636-6270690)
chr5 (938-995)||(11767489-11767547)
chr5 (591-668)||(16799899-16799975)
chr5 (585-698)||(29352483-29352596)
chr5 (591-719)||(12934716-12934844)
chr5 (933-986)||(34869109-34869162)
chr5 (625-737)||(16793564-16793676)
chr5 (930-986)||(42801049-42801105)
chr5 (586-667)||(4534044-4534126)
chr5 (590-668)||(29353590-29353668)
chr5 (624-761)||(42876172-42876308)
chr5 (686-736)||(9071896-9071946)
chr5 (590-668)||(20869088-20869166)
chr5 (614-668)||(29994271-29994324)
chr5 (615-668)||(18695027-18695080)
chr5 (592-708)||(38108021-38108138)
chr5 (615-666)||(2375741-2375791)
chr5 (591-646)||(9072275-9072330)
chr5 (614-668)||(25557103-25557156)
chr5 (629-666)||(8645834-8645871)
chr5 (611-664)||(16901016-16901069)
[»] scaffold0050 (2 HSPs)
scaffold0050 (591-733)||(80926-81066)
scaffold0050 (593-733)||(79834-79972)
[»] scaffold0203 (3 HSPs)
scaffold0203 (591-708)||(9561-9678)
scaffold0203 (591-708)||(14935-15052)
scaffold0203 (590-719)||(16036-16165)
[»] scaffold0014 (1 HSPs)
scaffold0014 (930-993)||(75667-75730)
[»] scaffold0159 (1 HSPs)
scaffold0159 (929-995)||(28260-28326)
[»] scaffold0008 (1 HSPs)
scaffold0008 (591-737)||(268410-268555)
[»] scaffold0827 (2 HSPs)
scaffold0827 (615-724)||(3213-3322)
scaffold0827 (673-758)||(2440-2525)
[»] scaffold0298 (2 HSPs)
scaffold0298 (938-995)||(11574-11631)
scaffold0298 (938-995)||(15344-15401)
[»] scaffold0015 (1 HSPs)
scaffold0015 (938-995)||(175336-175393)
[»] scaffold0446 (1 HSPs)
scaffold0446 (591-667)||(11560-11636)
[»] scaffold0019 (2 HSPs)
scaffold0019 (938-995)||(168778-168835)
scaffold0019 (930-995)||(115930-115995)
[»] scaffold0002 (1 HSPs)
scaffold0002 (938-995)||(349976-350033)
[»] scaffold0151 (3 HSPs)
scaffold0151 (589-728)||(38284-38424)
scaffold0151 (614-708)||(24828-24921)
scaffold0151 (614-708)||(37345-37438)
[»] scaffold0076 (1 HSPs)
scaffold0076 (929-995)||(25010-25077)
[»] scaffold0444 (1 HSPs)
scaffold0444 (938-995)||(11856-11914)
[»] scaffold0336 (1 HSPs)
scaffold0336 (938-995)||(9477-9535)
[»] scaffold0124 (1 HSPs)
scaffold0124 (938-995)||(12929-12987)
[»] scaffold0147 (1 HSPs)
scaffold0147 (938-992)||(7469-7522)
[»] scaffold0419 (1 HSPs)
scaffold0419 (615-668)||(3188-3241)
[»] scaffold1212 (1 HSPs)
scaffold1212 (582-640)||(2125-2183)
[»] scaffold0406 (1 HSPs)
scaffold0406 (615-668)||(2020-2073)
[»] scaffold0060 (1 HSPs)
scaffold0060 (930-995)||(6251-6316)
[»] scaffold0025 (2 HSPs)
scaffold0025 (611-668)||(19304-19360)
scaffold0025 (615-668)||(61837-61890)
[»] scaffold1875 (1 HSPs)
scaffold1875 (629-668)||(984-1023)
[»] scaffold0683 (1 HSPs)
scaffold0683 (629-684)||(5327-5381)
[»] scaffold0001 (1 HSPs)
scaffold0001 (615-668)||(142174-142227)


Alignment Details
Target: chr3 (Bit Score: 554; Significance: 0; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 554; E-Value: 0
Query Start/End: Original strand, 33 - 764
Target Start/End: Complemental strand, 37024401 - 37023695
Alignment:
Q  33 gcttaaccaaatcccatttatctggaatggacatacaattagctcctacctgctatagacataagttaataaattgcattctaatcgcagtctccaattc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| | ||    
T  37024401 gcttaaccaaatcccatttatctggaatggacatacaattagctcctacctgctatagacataa----ataaattgcattctaatcgcagtctcctactc 37024306  T
Q  133 gtctgcaacctcggagacaaaaaattactatccaaaaaatcaataagggcacatataaatcaatattcatgtaaatgccgcgttgaagattcatgcaaca 232  Q
    |||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||    
T  37024305 gtctgcaacctcggagacaaaaaattactatccaaaaaatc--------------------aatattcatgtaaatgccgcgttgaagattcatgcaaca 37024226  T
Q  233 cccaaatccatatcaaaatcactacatattaatcaatgaaattctgtcaaaatgaagacaacatatttaatttataaaaccaaaataactccatatttta 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37024225 cccaaatccatatcaaaatcactacatattaatcaatgaaattctgtcaaaatgaagacaacatatttaatttataaaaccaaaataactccatatttta 37024126  T
Q  333 tcacgtgagatgtgaaatgtttgtctagagaaatgcttatagctaagcagtattcaattccaaatcacacattcaaagtttccaacaacaacgacataca 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37024125 tcacgtgagatgtgaaatgtttgtctagagaaatgcttatagctaagcaatattcaattccaaaacacacattcaaagtttccaacaacaacgacataca 37024026  T
Q  433 cgtatcnnnnnnncaaaattatgatactaacaaaattgaaactttatcaccctcatccacctgattaatcaagaaaattagggtggattttgatcaatca 532  Q
    ||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37024025 cgtatcaaaaaaacaaaattatgatactaacaaaattgaaactctatcaccctcatccacctgattaatcaagaaaattagggtggattttgatcaatca 37023926  T
Q  533 aactgaacacattgtagatgagaaacaaatattatatcaatcgacgacaatatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttg 632  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37023925 aactgaacacattgtagatgagaagcaaatattatatcaatcgacgacaatatttttaaggcttaaacacactttttacctcctaagtttgcaaaagttg 37023826  T
Q  633 caattttgaccccctattaaaacaaatggcaaaag-tcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtca 731  Q
    ||||||||  ||||| |||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  37023825 caattttg-gcccctgttaaaaaaaatggcaaaagttcccccctcatgtttaaccccttttgcaaaacaccaattttgacttggtcaaacctatgtgtca 37023727  T
Q  732 tgccacttaacttaaaaaattgccaactgtgta 764  Q
    ||||||||||||| |||||||||||||||||||    
T  37023726 tgccacttaactt-aaaaattgccaactgtgta 37023695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 184; E-Value: 5e-99
Query Start/End: Original strand, 796 - 995
Target Start/End: Complemental strand, 37023624 - 37023425
Alignment:
Q  796 ggattaattgaagatattaacattcatcttcttcacctaattcttcatctttttaatccatttctttttaaaaaatgcagaatattacatcaccacacca 895  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37023624 ggattaattgaagagattaacattcatcttcttcacctaattcttcatctttttcatccatttctttttaaaaaatgcagaatattacatcaccacacca 37023525  T
Q  896 cctcaaccttcatctccgatcttgttcaccaccatgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  37023524 cctcaaccttcatctccgatcttgttcaccaccatgatgtaagatttttacatctcataaaactatttacacgtaagtataatatgatcgagtccacagg 37023425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 591 - 764
Target Start/End: Original strand, 45580107 - 45580279
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaa-tggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||||||||||   ||    
T  45580107 aggcttaaacacactttttactccctaagtttgcaaaagttgcaattttggcctcctattaaaaaaaaatggcaaaagtcccccctcatgtttagcttct 45580206  T
Q  690 tttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgtgta 764  Q
    |||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  45580207 tttgcaaaat--caattttgacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgtcagctgtgta 45580279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 815 - 929
Target Start/End: Original strand, 45580371 - 45580486
Alignment:
Q  815 acattcatcttcttcacctaattc-ttcatctttttaatccatttctttttaaaaaatgcagaatattacatcaccacaccacctcaaccttcatctccg 913  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45580371 acattcatcttcttcacctaattccttcatctttttcatccatttctttttaaaaaatgcagaatattacatcaccacaccacctcaaccttcatctccg 45580470  T
Q  914 atcttgttcaccacca 929  Q
    ||||||||||||||||    
T  45580471 atcttgttcaccacca 45580486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 592 - 736
Target Start/End: Original strand, 2213922 - 2214066
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    ||||||||| ||||||  ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||    
T  2213922 ggcttaaacccacttttgaccccctaagttttcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagccacccctcatgtttagccccttt 2214021  T
Q  692 tgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    |||||||| |||||||| |||| ||||| |||| |||||||||||    
T  2214022 tgcaaaaccccaattttgacttagtcaagcctacgtgtcatgcca 2214066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 585 - 759
Target Start/End: Original strand, 6247377 - 6247551
Alignment:
Q  585 tttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttag 684  Q
    |||| |||||| |||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||    
T  6247377 ttttaaaggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccttatgtttag 6247476  T
Q  685 tcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaact 759  Q
     ||||| ||||||||  ||||||| ||   ||||| ||||||||||||||||| ||| ||||||| |||||||||    
T  6247477 ccccttctgcaaaacctcaattttgacccagtcaatcctatgtgtcatgccacctaatttaaaaatttgccaact 6247551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 616 - 759
Target Start/End: Original strand, 50296230 - 50296373
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttgg 715  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||| |||||||| ||||||||||||||  ||||||| ||   |    
T  50296230 taagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtaaccccttatgtttagccccttttgcaaaacctcaattttgacccag 50296329  T
Q  716 tcaaacctatgtgtcatgccacttaacttaaaaaattgccaact 759  Q
    |||| ||||||||||||||||| ||| ||||||| |||||||||    
T  50296330 tcaatcctatgtgtcatgccacctaatttaaaaatttgccaact 50296373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 737
Target Start/End: Complemental strand, 45583317 - 45583170
Alignment:
Q  589 taaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccc 688  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||  || |  |||| ||  |||    
T  45583317 taaggcttaaacacactttctaacccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggtaaaagtgacctcctatgtcta-cccc 45583219  T
Q  689 ttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    ||||| |||||  ||||||| ||||||||| |||||  || ||||||||    
T  45583218 ttttgtaaaacgtcaattttgacttggtcatacctacatggcatgccac 45583170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 592 - 708
Target Start/End: Complemental strand, 50297369 - 50297253
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    |||| |||| |||||| | || ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||  ||||| |||||||| |||||     
T  50297369 ggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccttattaaaaaaaatggcaaaagtgaccccttatgtttagcccctta 50297270  T
Q  692 tgcaaaacaccaatttt 708  Q
    ||||||||  |||||||    
T  50297269 tgcaaaacctcaatttt 50297253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 7652592 - 7652649
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7652592 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 7652649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 9990187 - 9990130
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9990187 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 9990130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 36468798 - 36468863
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  36468798 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 36468863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 590 - 699
Target Start/End: Original strand, 37087111 - 37087220
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||||| | |||||||| || ||||||||||||   |||| |||||||   ||||    
T  37087111 aaggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggcaccctattagaaaaaatggcaaaagctaccccccatgttttccccct 37087210  T
Q  690 tttgcaaaac 699  Q
    ||||||||||    
T  37087211 tttgcaaaac 37087220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 928 - 993
Target Start/End: Original strand, 52307445 - 52307510
Alignment:
Q  928 catgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccaca 993  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  52307445 catgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 52307510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 930 - 986
Target Start/End: Original strand, 20962620 - 20962676
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20962620 tgatgtaggatttttacatctcataaaactatttacacgtaagtataataggatcgt 20962676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 614 - 737
Target Start/End: Complemental strand, 38262376 - 38262255
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaactt 713  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||| |||||||||  |||  ||||||||  ||||||||||||||  |||||||||||     
T  38262376 cctaagtttgcagaagttgcaattttggccccctattaaaaaaaaaggcaaaagtgaccc--catgtttacccccttttgcaaaacgtcaattttaactc 38262279  T
Q  714 ggtcaaacctatgtgtcatgccac 737  Q
     ||||| | |||||| ||||||||    
T  38262278 agtcaaccatatgtggcatgccac 38262255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 590 - 708
Target Start/End: Complemental strand, 6248513 - 6248394
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctatt-aaaacaaatggcaaaagtcccccctcatgtttagtccc 688  Q
    |||||| |||| |||||| | || ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||  ||||| ||| |||| |||    
T  6248513 aaggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaaatggcaaaagtgaccccttatggttagcccc 6248414  T
Q  689 ttttgcaaaacaccaatttt 708  Q
    || ||||||||  |||||||    
T  6248413 ttctgcaaaacctcaatttt 6248394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 602 - 737
Target Start/End: Complemental strand, 40630673 - 40630538
Alignment:
Q  602 cactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacac 701  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||   |||  |||| ||  ||||||||||||||      
T  40630673 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatagcaaaagtgatcccctatgtctacccccttttgcaaaacgt 40630574  T
Q  702 caattttaacttggtcaaacctatgtgtcatgccac 737  Q
    ||||||| |||  ||||| |||||||| || |||||    
T  40630573 caattttgactcagtcaaccctatgtggcacgccac 40630538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 591 - 742
Target Start/End: Complemental strand, 52986308 - 52986152
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| |||  |||||||||| ||||||| |||||||||||||||||||||| |||||| || | |  |||||||||||||  |||||    
T  52986308 aggcttaaacacactttttactccctaagtttgtaaaagttacaattttgaccccctattaaaa-aaatggtaagaatgacccctcatgtttaccccctt 52986210  T
Q  691 ttgcaaaacaccaattttaacttggtc------aaacctatgtgtcatgccacttaac 742  Q
    || |||||   ||||||| |||  |||      |||||||||||||||||||||||||    
T  52986209 ttacaaaatctcaattttgactaagtcaaacctaaacctatgtgtcatgccacttaac 52986152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 929 - 986
Target Start/End: Complemental strand, 2357960 - 2357903
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  2357960 atgatgtaagatttttacatgtcataaaactatttacacgtaagtataatatgatcgt 2357903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 929 - 986
Target Start/End: Original strand, 11257846 - 11257903
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11257846 atgatgtaggatttttacatctcataaaactatttacacataagtataataggatcgt 11257903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 588 - 737
Target Start/End: Original strand, 38261301 - 38261450
Alignment:
Q  588 ttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcc 687  Q
    |||||||| |||| |||||| |  | |||||||||||| |||||||||||||| || |||||||||| |||||||||||||  |||| ||||| ||  ||    
T  38261301 ttaaggctaaaacgcactttttgtcccctaagtttgcagaagttgcaattttggccacctattaaaaaaaatggcaaaagtgaccccccatgtctacccc 38261400  T
Q  688 cttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    ||||||||||||  ||||||| |||  ||||| | |||||| || |||||    
T  38261401 cttttgcaaaacgtcaattttgactcagtcaaccatatgtggcacgccac 38261450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 48167553 - 48167618
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || |||||    
T  48167553 tgatgtaagatttttacatgtcataaaactatttatacgtaagtataataggatcgtttcgacagg 48167618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 591 - 699
Target Start/End: Complemental strand, 37088217 - 37088111
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||  |||||| |||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||  |||| |||||||   |||||    
T  37088217 aggcttaaattcactttttaccccctaagtttgcaaaagttgcaaattttaccccctattaaaa-aaatggcaaaagttacccc-catgttttccccctt 37088120  T
Q  691 ttgcaaaac 699  Q
    |||||||||    
T  37088119 ttgcaaaac 37088111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 597 - 708
Target Start/End: Complemental strand, 17341550 - 17341439
Alignment:
Q  597 aaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaa 696  Q
    |||| |||||| | || |||||||||||| |||||||||||||||||||||||||||| |||||  ||||||  |||| ||||| ||  |||||||||||    
T  17341550 aaacgcactttttgccccctaagtttgcagaagttgcaattttgaccccctattaaaaaaaatgataaaagtgaccccccatgtctacccccttttgcaa 17341451  T
Q  697 aacaccaatttt 708  Q
    |||  |||||||    
T  17341450 aacgtcaatttt 17341439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 591 - 738
Target Start/End: Original strand, 52985129 - 52985276
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| ||||  ||||||||| ||||||| ||||||||  |||||||||||| |||||| |||| |   ||| |||| |||  |||||    
T  52985129 aggcttaaacacactttttaccctctaagtttgtaaaagttacaattttggtcccctattaaaaaaaatggtaaaaatgatcccccatgattatcccctt 52985228  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccact 738  Q
    |||||||||  ||| ||| |||| ||||| | |||||| |||||||||    
T  52985229 ttgcaaaacctcaactttgacttagtcaagcttatgtgccatgccact 52985276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 8626416 - 8626358
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8626416 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 8626358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 10385439 - 10385497
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10385439 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 10385497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 23383097 - 23383039
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23383097 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 23383039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 22098772 - 22098715
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  22098772 gatttttccatctcataaaactatttacatgtgagtataataggatcgtgtccacagg 22098715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 33248789 - 33248724
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||| ||| ||||    
T  33248789 tgatgtaagatttttacatgtcataaaactatttacacataattataataggatcgtttccgcagg 33248724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 938 - 994
Target Start/End: Original strand, 27849921 - 27849977
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacag 994  Q
    ||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||    
T  27849921 gatttttccatctcataaaactatttacatgtgagtataataggatcgtgtccacag 27849977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 644 - 742
Target Start/End: Original strand, 54578807 - 54578904
Alignment:
Q  644 ccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaac 742  Q
    ||||||||||| |||| || ||||||| ||||||||||||| |||| ||||||||  |||||||| |||| || || ||||||| ||||||||||||||    
T  54578807 ccctattaaaa-aaatagccaaagtcctccctcatgtttagcccctcttgcaaaatcccaattttgacttagtgaagcctatgtttcatgccacttaac 54578904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 4742364 - 4742429
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| |  ||||||||||||||||| |||||||||||||||| ||| ||||    
T  4742364 tgatgtaagatttttacatgtattaaaactatttacacgtgagtataataggatcgtttccgcagg 4742429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 581 - 737
Target Start/End: Original strand, 40630007 - 40630163
Alignment:
Q  581 aatatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgt 680  Q
    |||||| | |||||| |||| |||||| ||||   ||||||||||||||||||||||||| | || |||||||| |||||||||||||   |||  ||||    
T  40630007 aatattctaaaggctaaaacgcactttttacccattaagtttgcaaaagttgcaattttggcaccttattaaaaaaaatggcaaaagtgatcccctatgt 40630106  T
Q  681 ttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
     ||  |||||||||||||   ||||||| |||  ||||| |||||||| || |||||    
T  40630107 ctacccccttttgcaaaatgtcaattttgactcagtcaaccctatgtggcacgccac 40630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 23397088 - 23397030
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  23397088 gatttttacctcttataaaactatttacacgtaagtatatataggatcgtatccacagg 23397030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 634 - 719
Target Start/End: Original strand, 1834858 - 1834943
Alignment:
Q  634 aattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaa 719  Q
    ||||| |||||||| || ||| |||||||||||||| |||||||| ||||| || ||||  |||||| ||||||| ||||||||||    
T  1834858 aatttagacccccttttcaaaaaaatggcaaaagtcacccctcatatttagcccattttataaaacatcaattttgacttggtcaa 1834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 615 - 684
Target Start/End: Complemental strand, 8339221 - 8339152
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttag 684  Q
    ||||||||  ||| |||||||||||| ||||||||||||| |||||||||||||  ||||| ||||||||    
T  8339221 ctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttag 8339152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 8542633 - 8542686
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| |||||||||||||||||||||||||| |||||||||||||    
T  8542633 ctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagt 8542686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 611 - 666
Target Start/End: Complemental strand, 11430872 - 11430817
Alignment:
Q  611 cctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaa 666  Q
    |||| |||||||||||| ||||||||||||| |||||||| ||| |||||||||||    
T  11430872 cctcttaagtttgcaaaggttgcaattttgatcccctattgaaaaaaatggcaaaa 11430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 614 - 668
Target Start/End: Complemental strand, 33279866 - 33279812
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  33279866 cctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagt 33279812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 731
Target Start/End: Complemental strand, 3266495 - 3266434
Alignment:
Q  670 ccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtca 731  Q
    ||||||||||||||| || |||||||||||  ||||||| | ||||||||||||| ||||||    
T  3266495 ccccctcatgtttagccctttttgcaaaacttcaattttgatttggtcaaacctacgtgtca 3266434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 9434447 - 9434512
Alignment:
Q  594 cttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaat 659  Q
    ||||||| ||||||  |||  |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  9434447 cttaaacccacttttcaccctctaagtttgcaaaagtagcaattttggccccctattaaaaaaaat 9434512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 27853032 - 27852979
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| |||||||||||| ||||||||||||| |||||||||||||    
T  27853032 ctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagt 27852979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 930 - 986
Target Start/End: Complemental strand, 27104822 - 27104766
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| ||||| ||||||||| | || ||||||||| ||||||    
T  27104822 tgatgtaagatttttacatgtcatataactatttataagtgagtataatatgatcgt 27104766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 668
Target Start/End: Complemental strand, 46673326 - 46673275
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||| |||| ||||| |||||||||||||||||||| |||||||||||||    
T  46673326 taagttttcaaatgttgcgattttgaccccctattaaaa-aaatggcaaaagt 46673275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 668
Target Start/End: Original strand, 22416369 - 22416408
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  22416369 gttgcaattttgatcccctattaaaaaaaatggcaaaagt 22416408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 668
Target Start/End: Complemental strand, 22500861 - 22500823
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  22500861 gttgcaattttgaccccctattaaaa-aaatggcaaaagt 22500823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 668
Target Start/End: Complemental strand, 23428901 - 23428847
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||  ||| ||| |||||||| ||||||||||||| |||||||||||||    
T  23428901 cctaagtttcaaaatgttacaattttggccccctattaaaaaaaatggcaaaagt 23428847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 661
Target Start/End: Original strand, 37021892 - 37021938
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatgg 661  Q
    |||||||||||||||||||||||||  ||||| ||||||| ||||||    
T  37021892 ctaagtttgcaaaagttgcaattttagcccccaattaaaaaaaatgg 37021938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 22448025 - 22447972
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| |||||||||||| ||||||||||||| | |||||||||||    
T  22448025 ctaagttttaaaatgttgcaattttggccccctattaaaaaatatggcaaaagt 22447972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 26628306 - 26628253
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  26628306 ctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 26628253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 8e-67; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 591 - 764
Target Start/End: Original strand, 14054117 - 14054288
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| | || |||||||| ||||||||||| ||||||||||||||||| |||||    
T  14054117 aggcttaaacacactttttacctcctaagtttgcaaaagttgcaattttggctcc-tattaaaa-aaatggcaaaaatcccccctcatgtttagcccctt 14054214  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgtgta 764  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14054215 ttgcaaaacaccaattttgacttgatcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgtgta 14054288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 594 - 764
Target Start/End: Original strand, 35562246 - 35562413
Alignment:
Q  594 cttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttg 693  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||| |||||||||| |||||||     
T  35562246 cttaaacacactttttaccctctaagtttgcaaaagttgcaattttgacccc-tattaaaa-aaatggcaaaagtttccc-tcatgtttagaccctttta 35562342  T
Q  694 caaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgtgta 764  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35562343 caaaacatcaattttgacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgtgta 35562413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 815 - 929
Target Start/End: Original strand, 14054382 - 14054498
Alignment:
Q  815 acattcatcttcttcacctaattc-ttcatctttttaatccatttctttttaaaa-aatgcagaatattacatcaccacaccacctcaaccttcatctcc 912  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  14054382 acattcatcttcttcacctaattccttcatctttttcatccatttctttttaaaaaaatgcagaatattacatcacaacaccacctcaaccttcatctcc 14054481  T
Q  913 gatcttgttcaccacca 929  Q
    ||| |||||||||||||    
T  14054482 gatattgttcaccacca 14054498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 590 - 736
Target Start/End: Complemental strand, 39689045 - 39688900
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||| || |||  ||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | |||||||||||||| ||||    
T  39689045 aaggcttaaacccatttttgaccccctaaatttgcaaaagttgcaattttgaccccctattaaaaaaaaaggcaaaagacacccctcatgtttag-ccct 39688947  T
Q  690 tttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    ||||||||||  ||||||| |||||||||| |||| |||||||||||    
T  39688946 tttgcaaaacctcaattttgacttggtcaagcctacgtgtcatgcca 39688900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 591 - 738
Target Start/End: Original strand, 28301343 - 28301490
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||||  |||||| |||||| |||||||||||||  |||||| ||||||| |||||    
T  28301343 aggcttaaacacactttttacctcctatgtttgaaaaagttgcaattttagcccccttttaaaaaaaatggcaaaagtggcccctcgtgtttagcccctt 28301442  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccact 738  Q
    ||||||||| |||||||| || |||||||  | |||||||| ||||||    
T  28301443 ttgcaaaactccaattttgacctggtcaacgccatgtgtcaagccact 28301490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 582 - 719
Target Start/End: Complemental strand, 28301716 - 28301580
Alignment:
Q  582 atatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtt 681  Q
    |||| ||| |||||||||| |||||| ||||||||||||||||||||||||||||||| | ||||| |||||| |||| ||||||||  |||||||||||    
T  28301716 atatattttaggcttaaacgcactttttacctcctaagtttgcaaaagttgcaatttt-agccccttttaaaaaaaatagcaaaagtgacccctcatgtt 28301618  T
Q  682 tagtcccttttgcaaaacaccaattttaacttggtcaa 719  Q
    ||| |||||||||||||| |||||||| || |||||||    
T  28301617 tagccccttttgcaaaactccaattttgacctggtcaa 28301580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 590 - 756
Target Start/End: Original strand, 6571324 - 6571490
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||| |||||| || | | ||||||||||||||||||||||||||  ||||||||||| |||||||||||||   |||| |||||||| || |    
T  6571324 aaggcttaaactcactttttatcccttaagtttgcaaaagttgcaattttgattccctattaaaaaaaatggcaaaagtgatcccttatgtttagcccat 6571423  T
Q  690 tttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgcca 756  Q
    ||||||||||  ||||||| || ||||||| | || ||||||||| || | ||||||||||||||||    
T  6571424 tttgcaaaacctcaattttgacctggtcaaccataggtgtcatgcaacatcacttaaaaaattgcca 6571490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 591 - 719
Target Start/End: Original strand, 26830324 - 26830451
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| |||| |||| ||||||||| || ||||||||||||||||||||||| |||||||||||||   ||| ||||||||  |||||    
T  26830324 aggcttaaacacactttttaccccctaggtttgcaaacgtagcaattttgaccccctattaaaa-aaatggcaaaagttatcccccatgtttaccccctt 26830422  T
Q  691 ttgcaaaacaccaattttaacttggtcaa 719  Q
    ||||||||| |||||||| ||||||||||    
T  26830423 ttgcaaaaccccaattttgacttggtcaa 26830451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 591 - 736
Target Start/End: Complemental strand, 45519549 - 45519406
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| |||||| ||||  |||| ||||||||||||||||||||| ||||||||||||| || ||||||||||    |||||||| || ||||||    
T  45519549 aggcttaaacgcactttttaccctctaactttgcaaaagttgcaattttggccccctattaaaaaaattggcaaaagt-gatcctcatgtcta-tccctt 45519452  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    ||||||||||||||||||||||||||||| | ||| ||||| ||||    
T  45519451 ttgcaaaacaccaattttaacttggtcaatcatatatgtcacgcca 45519406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 591 - 730
Target Start/End: Original strand, 39688341 - 39688480
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| ||||||  ||| | |||||||||||||||||||||||||  |||||||||||| ||||||| |||| | ||| |||||||||  |||||    
T  39688341 aggcttaaacccacttttgaccccttaagtttgcaaaagttgcaattttggtcccctattaaaaaaaatggccaaagacacccgtcatgtttaacccctt 39688440  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtc 730  Q
    |||||| || ||||| || |||||||||| ||||||||||    
T  39688441 ttgcaatactccaatcttgacttggtcaatcctatgtgtc 39688480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 590 - 749
Target Start/End: Original strand, 45518166 - 45518325
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    |||||||||||||||||| || |  |||| |||||| |||||||||||||||||||||||||||| || |||||||| |  |||| ||| ||||  ||||    
T  45518166 aaggcttaaacacactttttatcctctaactttgcagaagttgcaattttgaccccctattaaaaaaagtggcaaaaatgaccccccatatttaacccct 45518265  T
Q  690 tttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaa 749  Q
    ||||||||| | ||||||| || || |||| |||| |||||| ||||| |||||||||||    
T  45518266 tttgcaaaagatcaattttgacctgatcaatcctaggtgtcacgccacataacttaaaaa 45518325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 590 - 737
Target Start/End: Complemental strand, 6572494 - 6572345
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaa--tggcaaaagtcccccctcatgtttagtcc 687  Q
    ||||||||||| || ||| |||| | || ||||||||||||| |||||||| || |||||||||| |||  |||||||| |  |||||||||||||| ||    
T  6572494 aaggcttaaacccagtttttaccccttaggtttgcaaaagttacaattttggcctcctattaaaaaaaaaatggcaaaaatgacccctcatgtttagccc 6572395  T
Q  688 cttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    ||||||||||||  ||||||||||||||||||   |||||||||||||||    
T  6572394 cttttgcaaaacctcaattttaacttggtcaacgttatgtgtcatgccac 6572345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 592 - 737
Target Start/End: Original strand, 23753259 - 23753404
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||| ||||||||||||| |||||||||||||  |  | ||| ||||  ||||||    
T  23753259 ggcttaaacacactttttaccccctaagtttgtaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgacatcccatatttatccccttt 23753358  T
Q  692 tgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    ||||||||  ||||||| ||||| |||| ||||  || ||||||||    
T  23753359 tgcaaaacgtcaattttgacttgatcaagcctacatggcatgccac 23753404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 615 - 759
Target Start/End: Complemental strand, 23754410 - 23754267
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttg 714  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| |||||||  |||| |||| |||  || |||||||||||  ||||||||||||     
T  23754410 ctaagtttgcaaaagttgcaatttgggccccctattaaaaaaaatgacaaaagtgaccccccatg-ttatccctttttgcaaaacctcaattttaactta 23754312  T
Q  715 gtcaaacctatgtgtcatgccacttaacttaaaaaattgccaact 759  Q
    ||||||| ||||||||| ||||| | | ||||||||| |||||||    
T  23754311 gtcaaacttatgtgtcacgccacatcaattaaaaaatcgccaact 23754267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 591 - 761
Target Start/End: Complemental strand, 26831501 - 26831333
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| |||| ||||||||||||||||| | ||||||| ||||||||||||| ||| |||||||||  |||  |||||| |  || ||    
T  26831501 aggcttaaacacactttttaccccctaagtttgcaaaagtagtaattttggccccctattaaaaaaaaaggcaaaagtgaccc--catgttgaccccatt 26831404  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgt 761  Q
    ||||||||| ||||||||||||||| |||  |||  |  |||||||| ||| ||||||| |||||| ||||    
T  26831403 ttgcaaaaccccaattttaacttggccaagtctacatagcatgccacataagttaaaaagttgccagctgt 26831333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 591 - 708
Target Start/End: Complemental strand, 39582057 - 39581940
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||  |||  ||||||||  | |||    
T  39582057 aggcttaaacacactttttactccctaagtttgcaaaagttgcaattttggcccccttttaaaaaaaatggcaaaagtgaccctccatgtttaccctctt 39581958  T
Q  691 ttgcaaaacaccaatttt 708  Q
     |||||||| ||||||||    
T  39581957 ctgcaaaaccccaatttt 39581940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 8742653 - 8742710
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8742653 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 8742710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 9067537 - 9067594
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9067537 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 9067594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 11308357 - 11308414
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11308357 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 11308414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 41576701 - 41576758
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41576701 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 41576758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 590 - 667
Target Start/End: Complemental strand, 45021707 - 45021630
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    ||||||||||| |||||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  45021707 aaggcttaaactcactttttaccccctaagtttgtaaaagttgcaattttgaccccctattaaaaaaaatgacaaaag 45021630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 590 - 698
Target Start/End: Complemental strand, 1192174 - 1192066
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    |||||||||||  |||||  |||  |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||  |||| ||||||||  ||||    
T  1192174 aaggcttaaacctacttttcaccctctaagtttgcaaaagtagcaattttggccccctattaaaaaaaatggcaaaagtgaccccccatgtttaccccct 1192075  T
Q  690 tttgcaaaa 698  Q
    |||||||||    
T  1192074 tttgcaaaa 1192066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 928 - 995
Target Start/End: Complemental strand, 3299603 - 3299536
Alignment:
Q  928 catgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  3299603 catgatgaaggatttttacctctcataaaactatttacacataagtataataggatcgtgtccacagg 3299536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 615 - 698
Target Start/End: Complemental strand, 41774812 - 41774730
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaa 698  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||  |||| ||| |||| ||||||||||||||    
T  41774812 ctaagtttgcaaaagtagcaattttgaccccctattaaaaaaaatggcaaaagtgacccc-catatttactcccttttgcaaaa 41774730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 22181368 - 22181311
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22181368 gatttttccatctcataaaactattcacacgtaagtataataggatcgtgtccacagg 22181311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 27348818 - 27348761
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27348818 gatttttacctctcataaaactatttacacgtaagtataatagaatcgtgtccacagg 27348761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 585 - 737
Target Start/End: Original strand, 36984139 - 36984288
Alignment:
Q  585 tttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttag 684  Q
    ||||| |||||||||| |||||| ||||| ||||||||||||||||||||||||||| | ||| |||||| ||| |||||||||  |||  ||||||||     
T  36984139 ttttttaggcttaaacgcactttttacctactaagtttgcaaaagttgcaattttgatctccttttaaaa-aaacggcaaaagtgaccc--catgtttac 36984235  T
Q  685 tcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
      |||||||||||||  ||||||| |||   |||| | |||||||||||||||    
T  36984236 cgccttttgcaaaacctcaattttgactcaatcaaccatatgtgtcatgccac 36984288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 591 - 718
Target Start/End: Complemental strand, 14055511 - 14055384
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaat-ggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||| |||  || ||||||  ||||  |||| ||  ||||    
T  14055511 aggcttaaacacactttctaccccctaagtttgcaaaagttgcaattttggcccc-tattaaaaaaaaaaggtaaaagtgaccccctatgtctaccccct 14055413  T
Q  690 tttgcaaaacaccaattttaacttggtca 718  Q
    |||| |||||  |||||||||||||||||    
T  14055412 tttgtaaaacgtcaattttaacttggtca 14055384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 936 - 995
Target Start/End: Original strand, 28925510 - 28925570
Alignment:
Q  936 aagatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28925510 aagatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 28925570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 591 - 667
Target Start/End: Original strand, 41944354 - 41944430
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||||||  |||||| ||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  41944354 aggcttaaattcactttttaccctctaagtttgcaaaagttgcaattttgacctcctattaaaaaaaatggcaaaag 41944430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 940 - 995
Target Start/End: Original strand, 34006145 - 34006200
Alignment:
Q  940 tttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34006145 tttttccatctcataaaactatttgcacgtaagtataataggatcgtgtccacagg 34006200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 595 - 708
Target Start/End: Original strand, 39580795 - 39580907
Alignment:
Q  595 ttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctatt-aaaacaaatggcaaaagtcccccctcatgtttagtcccttttg 693  Q
    |||||| |||||| |||| | ||||||||||||||||  |||||||||||||| || |||| |||||||||||||    ||||||||||| |||||||||    
T  39580795 ttaaactcactttttaccccttaagtttgcaaaagttataattttgacccccttttaaaaaaaaatggcaaaagt--gacctcatgtttactcccttttg 39580892  T
Q  694 caaaacaccaatttt 708  Q
    ||||||| |||||||    
T  39580893 caaaacatcaatttt 39580907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 592 - 667
Target Start/End: Original strand, 45020585 - 45020660
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    ||||||||| |||||| ||||  |||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  45020585 ggcttaaactcactttttaccctctaagtttgcaaaagttgcaatttttgccccctattaaaaaaaatggcaaaag 45020660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 13848689 - 13848754
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||| ||| ||||    
T  13848689 tgatgtaagatttttacatgtcataaaactatttacaagtgagtataataggatcgtttccgcagg 13848754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 16959350 - 16959286
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  16959350 tgatgtaagatttttac-tgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 16959286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 591 - 668
Target Start/End: Original strand, 44296719 - 44296796
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||| |||||| |||| | |||||||||||||||||||||||||| |||||  ||||| |||||||||||||    
T  44296719 aggcttaaacgcactttttaccccttaagtttgcaaaagttgcaattttgatccccttctaaaaaaaatggcaaaagt 44296796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 938 - 993
Target Start/End: Complemental strand, 16583169 - 16583113
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccaca 993  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  16583169 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccaca 16583113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 592 - 698
Target Start/End: Original strand, 1190969 - 1191074
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    ||||||||| ||||||  |||  |||||||||||||||| ||||||||| | ||||||||||| |||||||||||||  |||| ||||||||  || |||    
T  1190969 ggcttaaactcacttttcaccctctaagtttgcaaaagtagcaattttggctccctattaaaaaaaatggcaaaagtgacccc-catgtttacccctttt 1191067  T
Q  692 tgcaaaa 698  Q
    |||||||    
T  1191068 tgcaaaa 1191074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 614 - 736
Target Start/End: Original strand, 4376206 - 4376327
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaactt 713  Q
    |||||||||| ||| ||| |||||||| | ||||||||||| ||||| ||||    ||| || |||||||| |||||||||||||||| |||||| ||      
T  4376206 cctaagtttgtaaaggttacaattttggctccctattaaaaaaaatgacaaagtgaccctct-atgtttagccccttttgcaaaacactaattttgaccg 4376304  T
Q  714 ggtcaaacctatgtgtcatgcca 736  Q
    |||||||||||||||||| ||||    
T  4376305 ggtcaaacctatgtgtcacgcca 4376327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 593 - 666
Target Start/End: Complemental strand, 44066786 - 44066714
Alignment:
Q  593 gcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaa 666  Q
    |||||||||||| || || | | ||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  44066786 gcttaaacacaccttttatcccttaagtttgcaaaagttgtaattttgaccccctattaaaa-aaatggcaaaa 44066714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 581 - 737
Target Start/End: Complemental strand, 26363662 - 26363508
Alignment:
Q  581 aatatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgt 680  Q
    |||||||||| |||| |||| |||||| | || ||||| |||||| |||||||||||||| ||||||||||||| |||||||||||||  ||||  || |    
T  26363662 aatattttta-ggctaaaacgcactttttgccccctaaatttgcagaagttgcaattttggccccctattaaaa-aaatggcaaaagtgacccccaatat 26363565  T
Q  681 ttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
     ||  ||||||||||||||  ||||||| |||  ||||| | |||||| || |||||    
T  26363564 ctacccccttttgcaaaacgtcaattttgactcagtcaaccatatgtggcacgccac 26363508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 590 - 668
Target Start/End: Original strand, 22255572 - 22255649
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||| ||||||   || |||||||||||||||||||||||||||  ||| |||||||| |||||||||||||    
T  22255572 aaggcttaaacgcacttttcgccccctaagtttgcaaaagttgcaattttggtcccatattaaaa-aaatggcaaaagt 22255649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 938 - 991
Target Start/End: Complemental strand, 28370886 - 28370832
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtcca 991  Q
    ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  28370886 gatttttacctctcataaaactatttacatgtaagtatatataggatcgtgtcca 28370832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 592 - 718
Target Start/End: Complemental strand, 35563542 - 35563418
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    ||||||||| || ||| |||  ||||||||||||||||||||||||||  | ||||||||||| |||||| ||||||  ||||| |||| ||  ||||||    
T  35563542 ggcttaaacgcattttctactccctaagtttgcaaaagttgcaattttagctccctattaaaaaaaatggtaaaagtgacccct-atgtcta-ccccttt 35563445  T
Q  692 tgcaaaacaccaattttaacttggtca 718  Q
    || |||||  ||||||| |||||||||    
T  35563444 tgtaaaacgtcaatttttacttggtca 35563418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 590 - 668
Target Start/End: Complemental strand, 36985360 - 36985282
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||||  |||||  |||  |||||||||||||||||||||||||  |||||| |||||| |||||||||||||    
T  36985360 aaggcttaaacctacttttcaccctctaagtttgcaaaagttgcaattttagcccccttttaaaaaaaatggcaaaagt 36985282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 588 - 666
Target Start/End: Original strand, 44065483 - 44065561
Alignment:
Q  588 ttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaa 666  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||  |||||||   | ||||||||| |||||||||||    
T  44065483 ttaaggcttaaatacactttttacctcttaagtttgcaaaagttataattttggttctctattaaaaaaaatggcaaaa 44065561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 629 - 668
Target Start/End: Complemental strand, 18881768 - 18881729
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  18881768 gttgcaattttgaccccctattaaaaaaaatggcaaaagt 18881729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 629 - 668
Target Start/End: Original strand, 23565158 - 23565197
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  23565158 gttgcaattttgaccccctattaaaaaaaatggcaaaagt 23565197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 591 - 654
Target Start/End: Original strand, 41767546 - 41767608
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaa 654  Q
    |||||||||| ||||||  ||||| ||||||||||||||| ||||||||| |||||||||||||    
T  41767546 aggcttaaactcacttttcacctc-taagtttgcaaaagtagcaattttggccccctattaaaa 41767608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 668
Target Start/End: Complemental strand, 7117393 - 7117341
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||  ||||||||| ||||||||| |||||||||| |||||||||||||    
T  7117393 taagtttcaaaaagttgcgattttgaccacctattaaaaaaaatggcaaaagt 7117341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 8802680 - 8802627
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  8802680 ctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 8802627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 654
Target Start/End: Complemental strand, 10442348 - 10442279
Alignment:
Q  585 tttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaa 654  Q
    ||||| |||||||||||||||||  ||||||||| |||| |  |||||| |||||| |||||||| ||||    
T  10442348 ttttttaggcttaaacacacttttaacctcctaactttgtactagttgcgattttggccccctatcaaaa 10442279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 19924288 - 19924341
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| |||||||||||| |||| |||||||| |||||||||||||    
T  19924288 ctaagttttaaaatgttgcaattttggccccttattaaaaaaaatggcaaaagt 19924341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 21930082 - 21930030
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  21930082 ctaagtttcaaaatgttgcgattttgaccccctattaaaa-aaatggcaaaagt 21930030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 602 - 635
Target Start/End: Complemental strand, 23410107 - 23410074
Alignment:
Q  602 cactttgtacctcctaagtttgcaaaagttgcaa 635  Q
    |||||| |||||||||||||||||||||||||||    
T  23410107 cactttttacctcctaagtttgcaaaagttgcaa 23410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 5e-40; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 591 - 731
Target Start/End: Original strand, 1531634 - 1531774
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||  |||| ||||||||| |||||    
T  1531634 aggcttaaactcactttttactccctaagtttgcaaaagttgcaattttgaccccctattaaaaaaaattacaaaagttaccccccatgtttagcccctt 1531733  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtca 731  Q
    |||||||||||||||||| || ||||||| |||||||||||    
T  1531734 ttgcaaaacaccaattttgacctggtcaatcctatgtgtca 1531774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 591 - 736
Target Start/End: Complemental strand, 22778696 - 22778552
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||  |||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||  |  |||| ||||||||| ||| |    
T  22778696 aggcttaaatccactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaaaggcaaacatgacccc-catgtttagccccat 22778598  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  22778597 ttgcaaaacaccaattttgacttggtcaatcctatgtgtcacgcca 22778552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 591 - 737
Target Start/End: Original strand, 31376528 - 31376674
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||| |||||| |||||||||||||  |||||||||||||  |||||    
T  31376528 aggcttaaacgcacttttcaccctctaagtttgcaaaagttgcaattttggcccccttttaaaaaaaatggcaaaagtgacccctcatgtttaccccctt 31376627  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    |||||||||  ||||||| |||  ||||| | |||||||||||||||    
T  31376628 ttgcaaaacctcaattttgactcagtcaaccatatgtgtcatgccac 31376674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 591 - 667
Target Start/End: Original strand, 16273729 - 16273805
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||||||| |||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16273729 aggcttaaactcactttttaccccataagtttgcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaag 16273805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 591 - 708
Target Start/End: Original strand, 24037902 - 24038017
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| |||||| || | | |||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||  ||||||||  | |||    
T  24037902 aggcttaaactcactttttatcccttaagtttgcaaaagttgcaattttgacccccttttaaaaaaaatggcaaaagtgaccc--catgtttaccctctt 24037999  T
Q  691 ttgcaaaacaccaatttt 708  Q
    |||||||||| |||||||    
T  24038000 ttgcaaaacatcaatttt 24038017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 581 - 737
Target Start/End: Complemental strand, 1532642 - 1532485
Alignment:
Q  581 aatatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctatt-aaaacaaatggcaaaagtcccccctcatg 679  Q
    |||||||  ||||||||||| |||||| |||| |||||||||||| |||||||||||||| |||| |||| |||| |||||||||||||  |||| ||||    
T  1532642 aatatttaaaaggcttaaacccactttttaccccctaagtttgcagaagttgcaattttggccccatattaaaaaaaaatggcaaaagtgaccccccatg 1532543  T
Q  680 tttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    | ||  |||||||||||||   ||||||| |||| ||||| | |||||| || |||||    
T  1532542 tctacccccttttgcaaaatgtcaattttgacttagtcaaccgtatgtggcacgccac 1532485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 9667066 - 9667123
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9667066 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 9667123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 39000551 - 39000608
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39000551 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 39000608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 40999466 - 40999531
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  40999466 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 40999531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 928 - 984
Target Start/End: Original strand, 11738158 - 11738214
Alignment:
Q  928 catgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatc 984  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11738158 catgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatc 11738214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 591 - 667
Target Start/End: Complemental strand, 16277023 - 16276948
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16277023 aggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaa-aaatggcaaaag 16276948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 585 - 708
Target Start/End: Original strand, 5971079 - 5971202
Alignment:
Q  585 tttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttag 684  Q
    ||||| ||||| |||  |||||| | || ||||||||||||||||||||||||||  ||||||||||||| ||| |||||||||  |||||| |||||||    
T  5971079 ttttttaggctaaaatgcactttttgccccctaagtttgcaaaagttgcaattttagccccctattaaaaaaaaaggcaaaagtgacccctcctgtttag 5971178  T
Q  685 tcccttttgcaaaacaccaatttt 708  Q
     ||||| ||||||||  |||||||    
T  5971179 ccccttctgcaaaacctcaatttt 5971202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 616 - 719
Target Start/End: Complemental strand, 5972296 - 5972193
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttgg 715  Q
    ||||||| |||| |||||||||||| ||||||||||||| |||||||||||||  ||||| |||||||  ||||||||||||||  ||||||| ||| ||    
T  5972296 taagtttacaaaggttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttatccccttttgcaaaacctcaattttgactcgg 5972197  T
Q  716 tcaa 719  Q
    ||||    
T  5972196 tcaa 5972193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 615 - 737
Target Start/End: Complemental strand, 24033188 - 24033066
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttg 714  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||  |||| ||| ||||  ||||||||||||||  ||||||| ||       
T  24033188 ctaagtttgcaaaagtagcaattttggccccctattaaaaaaaatggcaaaagtgaccccccatatttacccccttttgcaaaacctcaattttgaccca 24033089  T
Q  715 gtcaaacctatgtgtcatgccac 737  Q
    ||||| | |||||| ||||||||    
T  24033088 gtcaaccatatgtggcatgccac 24033066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 33491568 - 33491625
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  33491568 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtctacagg 33491625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 614 - 719
Target Start/End: Original strand, 43914929 - 43915032
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaactt 713  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||||||||||  |||| ||||| ||  ||||||||||||||  ||||||| ||||    
T  43914929 cctaagtttgcaaaggttgcaattttggccccctattaaaa-aaatggcaaaagtgaccccccatgtcta-ccccttttgcaaaacgtcaattttgactt 43915026  T
Q  714 ggtcaa 719  Q
    ||||||    
T  43915027 ggtcaa 43915032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 930 - 986
Target Start/End: Complemental strand, 16131301 - 16131245
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  16131301 tgatgtaagatttttacatgtcataaaactatttacaagtaagtataataggatcgt 16131245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 948 - 995
Target Start/End: Original strand, 12167596 - 12167643
Alignment:
Q  948 tctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12167596 tctcataaaactatttacacgtaagtataataggatcgtgtccacagg 12167643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 593 - 708
Target Start/End: Complemental strand, 29183512 - 29183398
Alignment:
Q  593 gcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctttt 692  Q
    ||||||||||||||| ||||  ||||||||| |||||||||||||||| ||||||||||||| ||| |||||||||  |||| ||| | ||  |||||||    
T  29183512 gcttaaacacactttttaccctctaagtttgaaaaagttgcaattttggccccctattaaaa-aaaaggcaaaagtgaccccccatatataccccctttt 29183414  T
Q  693 gcaaaacaccaatttt 708  Q
    |||||||  |||||||    
T  29183413 gcaaaacgtcaatttt 29183398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 431710 - 431768
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  431710 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 431768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 929 - 995
Target Start/End: Original strand, 13217409 - 13217475
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| ||| ||||    
T  13217409 atgatgtaagatttttacatgtcataaaattatttacacgtgagtataataggatcgtttccgcagg 13217475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 16832145 - 16832210
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  16832145 tgatgtaggttttttacatctcataaaactatttacacgtgagtataataggatcgtttccgcagg 16832210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 38121302 - 38121359
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  38121302 gatttttacctctcataaaattatttacacgtaagtataataagatcgtgtccacagg 38121359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 930 - 986
Target Start/End: Original strand, 20225724 - 20225780
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  20225724 tgatgtaagagttttacatgtcataaaactatttacacgaaagtataataggatcgt 20225780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 617 - 720
Target Start/End: Original strand, 16355485 - 16355587
Alignment:
Q  617 aagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggt 716  Q
    |||||| ||||||| || ||||||||||||| |||||| |||||||||||||  ||| ||||||||| |||||||||||||||  ||  ||| |||||||    
T  16355485 aagttttcaaaagtagcgattttgaccccct-ttaaaaaaaatggcaaaagtgacccatcatgtttactcccttttgcaaaacttcagctttgacttggt 16355583  T
Q  717 caaa 720  Q
    ||||    
T  16355584 caaa 16355587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 615 - 737
Target Start/End: Complemental strand, 31377707 - 31377587
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttg 714  Q
    |||||||||||||||||| ||||||| |||||| |||||| |||||| ||||||  |||   |||||||  || |||||||||||||||||||| || ||    
T  31377707 ctaagtttgcaaaagttgtaattttggcccccttttaaaaaaaatggtaaaagtggccc--tatgtttaccccattttgcaaaacaccaattttgacctg 31377610  T
Q  715 gtcaaacctatgtgtcatgccac 737  Q
     |||| ||||  |||||||||||    
T  31377609 atcaatcctacatgtcatgccac 31377587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 591 - 719
Target Start/End: Original strand, 30105433 - 30105561
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||| |||   || |||||||||||||| |||||||||||  |||||||||||||  || | |||||||  |||| ||||| ||  |||||    
T  30105433 aggcttaaacacatttttcgccccctaagtttgcaaaggttgcaatttttgccccctattaaaaataaagacaaaagtgaccccccatgtctaccccctt 30105532  T
Q  691 ttgcaaaacaccaattttaacttggtcaa 719  Q
    |||||||||  ||||||| ||||| ||||    
T  30105533 ttgcaaaacgtcaattttgacttgatcaa 30105561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 938 - 991
Target Start/End: Complemental strand, 49249856 - 49249802
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtcca 991  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  49249856 gatttttacctctcataaaactatttacacgtaagtatatatatgatcgtgtcca 49249802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 591 - 708
Target Start/End: Original strand, 52142868 - 52142984
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||| ||||| |||| |||||||||| |||||||  ||||||||||| || |||||| ||||| |||||||  |||   |||||||  | |||    
T  52142868 aggcttaaacatactttttaccccctaagtttgtaaaagttataattttgaccctcttttaaaa-aaatgacaaaagtgaccctctatgtttacccgctt 52142966  T
Q  691 ttgcaaaacaccaatttt 708  Q
    ||||||||| ||||||||    
T  52142967 ttgcaaaaccccaatttt 52142984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 615 - 666
Target Start/End: Original strand, 43600928 - 43600979
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaa 666  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||| |||||    
T  43600928 ctaagtttacaaaagttgcaattttgacccccttttaaaaaaaatgacaaaa 43600979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 614 - 668
Target Start/End: Original strand, 2425247 - 2425301
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  2425247 cctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagt 2425301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 930 - 979
Target Start/End: Complemental strand, 25242612 - 25242563
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataata 979  Q
    ||||||||||||||||||| | ||| |||||||||||||| |||||||||    
T  25242612 tgatgtaagatttttacatgttatataactatttacacgtgagtataata 25242563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 664 - 708
Target Start/End: Complemental strand, 18964881 - 18964837
Alignment:
Q  664 aaagtcccccctcatgtttagtcccttttgcaaaacaccaatttt 708  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||    
T  18964881 aaagtcccccctcatgtttagccctttttgcaaaacactaatttt 18964837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 22776540 - 22776614
Alignment:
Q  630 ttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaat 705  Q
    ||||||||||  ||||||||||||| |||||| ||||||  |||||||||| ||  ||||||||||||||| ||||    
T  22776540 ttgcaattttagccccctattaaaa-aaatggtaaaagtgacccctcatgtctacccccttttgcaaaacatcaat 22776614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 654
Target Start/End: Original strand, 24032032 - 24032095
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaa 654  Q
    |||||||||| ||||||  |||  |||||||||||||||| ||||||||| || ||||||||||    
T  24032032 aggcttaaacccacttttcaccctctaagtttgcaaaagtagcaattttggccacctattaaaa 24032095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 668
Target Start/End: Complemental strand, 30107118 - 30107044
Alignment:
Q  593 gcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||| ||||||   || |||||||||||||| ||||||||||||  ||||| |||||| |||||||||||||    
T  30107118 gcttaaacgcacttttcgccccctaagtttgcaaatgttgcaattttggtcccctgttaaaa-aaatggcaaaagt 30107044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 651 - 753
Target Start/End: Complemental strand, 16356704 - 16356603
Alignment:
Q  651 aaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaa 750  Q
    |||| |||||| ||||||  ||||||||||||  |||||||| |||||| |||||||| ||| |||||| ||||  || || ||||| ||| ||||||||    
T  16356704 aaaaaaaatggaaaaagtggcccctcatgtttc-tccctttttcaaaactccaattttgactaggtcaagcctacatgacacgccacataagttaaaaaa 16356606  T
Q  751 ttg 753  Q
    |||    
T  16356605 ttg 16356603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 668
Target Start/End: Complemental strand, 28920933 - 28920879
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  28920933 cctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 28920879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 3616822 - 3616875
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  3616822 ctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 3616875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 592 - 653
Target Start/End: Complemental strand, 5108754 - 5108693
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaa 653  Q
    |||||||||||| |||   |||||||| ||||||  |||||| |||||||||||||||||||    
T  5108754 ggcttaaacacatttttggcctcctaattttgcactagttgcgattttgaccccctattaaa 5108693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 930 - 983
Target Start/End: Complemental strand, 13831069 - 13831016
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggat 983  Q
    ||||||||||||||||||| |||||   |||||||||||| |||||| ||||||    
T  13831069 tgatgtaagatttttacatttcatattcctatttacacgtgagtatattaggat 13831016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 611 - 668
Target Start/End: Original strand, 22786050 - 22786106
Alignment:
Q  611 cctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||||  ||| ||||| ||||||||||| |||||||| |||||||||||||    
T  22786050 cctcctaagttttaaaatgttgcgattttgacccc-tattaaaaaaaatggcaaaagt 22786106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 9e-39; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 590 - 736
Target Start/End: Original strand, 22812631 - 22812776
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||| ||||||  ||| | |||||||||||||||||||||||||| |||||||||||| |||||||||||| | ||||| |||||||||||||    
T  22812631 aaggcttaaacccacttttgaccccttaagtttgcaaaagttgcaattttgatcccctattaaaa-aaatggcaaaagacaccccttatgtttagtccct 22812729  T
Q  690 tttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    |||||||||| ||||||||  ||||||||| |||| |||||||||||    
T  22812730 tttgcaaaaccccaattttggcttggtcaagcctacgtgtcatgcca 22812776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 594 - 739
Target Start/End: Complemental strand, 52035206 - 52035061
Alignment:
Q  594 cttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttg 693  Q
    ||||||| |||||| |||| | ||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||| ||||||||    
T  52035206 cttaaacccactttttaccccttaaatttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaaatgacccctcatgtttagccccttttg 52035107  T
Q  694 caaaacaccaattttaacttggtcaaacctatgtgtcatgccactt 739  Q
    ||||||  ||||||| ||||||||||   ||| |||||||||||||    
T  52035106 caaaacctcaattttgacttggtcaacgttatatgtcatgccactt 52035061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 591 - 730
Target Start/End: Complemental strand, 22813346 - 22813207
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| ||||||  ||||| |||||||||||||||||||||||||  |||||||||||| |||||||||||| | |||||||||||||  |||||    
T  22813346 aggcttaaacccacttttgacctcttaagtttgcaaaagttgcaattttggtcccctattaaaaaaaatggcaaaagacacccctcatgtttaacccctt 22813247  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtc 730  Q
    ||| || || ||||| || |||||||||| ||||||||||    
T  22813246 ttgtaatactccaatcttgacttggtcaatcctatgtgtc 22813207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 594 - 756
Target Start/End: Original strand, 52034154 - 52034316
Alignment:
Q  594 cttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttg 693  Q
    ||||||| |||||| || | | |||||||||||||| |||||||||| ||||||||||||| ||||| |||||||  ||||| ||||| |||||||||||    
T  52034154 cttaaacccactttttatcccttaagtttgcaaaagctgcaattttggccccctattaaaaaaaatgacaaaagtgaccccttatgttcagtcccttttg 52034253  T
Q  694 caaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgcca 756  Q
    ||||||  ||||||| || || |||| | || |||||||||||| | ||||||||||||||||    
T  52034254 caaaacctcaattttgacctgatcaaccataggtgtcatgccacatcacttaaaaaattgcca 52034316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 590 - 737
Target Start/End: Complemental strand, 10616148 - 10616001
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  || | ||||| ||  ||||    
T  10616148 aaggcttaaacacactttctaccccctaaatttgcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagtgacctcccatgtctaccccct 10616049  T
Q  690 tttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    ||||||||||  ||||||| |||  ||||| | |||||| || |||||    
T  10616048 tttgcaaaacgtcaattttgactaagtcaaccatatgtggcacgccac 10616001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 591 - 756
Target Start/End: Original strand, 40872954 - 40873120
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaa-tggcaaaagtcccccctcatgtttagtccct 689  Q
    |||||||||| ||||||  ||| ||||||||||||||||||| |||||||||  |||||||||| ||| ||||||||||   ||||||||||||  || |    
T  40872954 aggcttaaacccacttttcaccccctaagtttgcaaaagttgtaattttgacttcctattaaaaaaaaatggcaaaagtgaaccctcatgtttaacccat 40873053  T
Q  690 tttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgcca 756  Q
    ||||||||||  ||||||| || ||||||| |  | |||||||||||| | ||||||||||||||||    
T  40873054 tttgcaaaacctcaattttgacctggtcaaccaaaagtgtcatgccacatcacttaaaaaattgcca 40873120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 590 - 742
Target Start/End: Complemental strand, 18704469 - 18704316
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaa-tggcaaaagtcccccctcatgtttagtccc 688  Q
    ||||||||||| |||| | |||| ||||| ||||||||||| ||||||||| |||| |||||||| ||| |||||||| |  ||||||||||||   |||    
T  18704469 aaggcttaaacgcactatttaccccctaattttgcaaaagtagcaattttggccccatattaaaaaaaaatggcaaaaatgacccctcatgtttgccccc 18704370  T
Q  689 ttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaac 742  Q
    |||||||||||  ||||||| |||| ||||| ||||||||||||||||| ||||    
T  18704369 ttttgcaaaacctcaattttgacttagtcaagcctatgtgtcatgccacataac 18704316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 614 - 759
Target Start/End: Complemental strand, 34370801 - 34370656
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaactt 713  Q
    ||||||||| ||||||||||||||||| |||| |||||||| || ||||||||||  ||||| |||||||| ||||| |||||||   ||||||| ||      
T  34370801 cctaagtttacaaaagttgcaattttggccccttattaaaaaaattggcaaaagtgaccccttatgtttagccccttctgcaaaatctcaattttgaccc 34370702  T
Q  714 ggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaact 759  Q
     ||||| ||||||||||||||||| ||| ||||||| |||||||||    
T  34370701 agtcaatcctatgtgtcatgccacctaatttaaaaatttgccaact 34370656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 592 - 761
Target Start/End: Complemental strand, 49700774 - 49700607
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||| | ||| | |||||| |||||||||||||  ||| |||||||||| ||||||    
T  49700774 ggcttaaacacactttttaccccctatgtttgcaaaagttgcaatttt-agccctttttaaaa-aaatggcaaaagtggcccatcatgtttagccccttt 49700677  T
Q  692 tgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgt 761  Q
    |||||||| |||||||| || | |||||  | |||||||| |||||| | | |||||| |||||| ||||    
T  49700676 tgcaaaactccaattttgacctcgtcaacgccatgtgtcaagccactcagcataaaaagttgccagctgt 49700607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 4838498 - 4838563
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4838498 tgatgaaagatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 4838563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 593 - 737
Target Start/End: Original strand, 6047064 - 6047207
Alignment:
Q  593 gcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctttt 692  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |  || || |||| ||  |||||||    
T  6047064 gcttaaacccactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaaatgacctcttatgtcta-cccctttt 6047162  T
Q  693 gcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    |||||||  ||||||| |||  ||||| | |||||| ||||||||    
T  6047163 gcaaaacgtcaattttgactcagtcaaccgtatgtggcatgccac 6047207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 590 - 682
Target Start/End: Complemental strand, 18705453 - 18705361
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgttt 682  Q
    ||||||||||| |||| | |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |  ||||||||||||    
T  18705453 aaggcttaaacgcactatttaccccctaagtttgcaaaagtagcaattttgaccccctattaaaaaaaatggcaaaaatgacccctcatgttt 18705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 592 - 667
Target Start/End: Complemental strand, 56113813 - 56113738
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  56113813 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaag 56113738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 5272933 - 5272990
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5272933 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 5272990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 21668266 - 21668331
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21668266 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 21668331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 21677030 - 21677095
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21677030 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 21677095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 22048473 - 22048416
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22048473 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 22048416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 35416058 - 35416123
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35416058 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 35416123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 579 - 719
Target Start/End: Original strand, 49700402 - 49700541
Alignment:
Q  579 acaatatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcat 678  Q
    |||| |||| ||||||||||||  ||||| |||| | ||||||| |||||||||||||||| | ||||| |||||| |||||||||||||   |||||||    
T  49700402 acaaaatttataaggcttaaacgtactttttaccccttaagtttacaaaagttgcaatttttatccccttttaaaa-aaatggcaaaagtaatccctcat 49700500  T
Q  679 gtttagtcccttttgcaaaacaccaattttaacttggtcaa 719  Q
    ||||||  ||||||| ||||| |||||||| | ||||||||    
T  49700501 gtttagcgccttttgtaaaactccaattttgatttggtcaa 49700541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 591 - 667
Target Start/End: Original strand, 56112694 - 56112770
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  56112694 aggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttagccccctattaaaaaaaatggcaaaag 56112770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 602 - 737
Target Start/End: Complemental strand, 1961218 - 1961083
Alignment:
Q  602 cactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacac 701  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||   |||  |||| ||  || |||||||||||      
T  1961218 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgatcccctatgtctacccctttttgcaaaacgt 1961119  T
Q  702 caattttaacttggtcaaacctatgtgtcatgccac 737  Q
    ||||||| |||  ||||| |||||||| || |||||    
T  1961118 caattttgactcagtcaaccctatgtggcacgccac 1961083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 635 - 750
Target Start/End: Original strand, 22098967 - 22099082
Alignment:
Q  635 attttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgc 734  Q
    ||||||||| |||||||||| | || ||||| | ||||| | |||||||| ||||||||||||||||||||||| |  |||| || ||||||||||||||    
T  22098967 attttgacctcctattaaaaaatatagcaaatgcccccctttatgtttagacccttttgcaaaacaccaattttgatctggttaatcctatgtgtcatgc 22099066  T
Q  735 cacttaacttaaaaaa 750  Q
     || ||||||||||||    
T  22099067 tacataacttaaaaaa 22099082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 936 - 995
Target Start/End: Complemental strand, 33239710 - 33239651
Alignment:
Q  936 aagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  33239710 aagatttttacctctcattaaactatttacacgtaagtataataggatcgtgtccacagg 33239651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 594 - 737
Target Start/End: Original strand, 40841995 - 40842138
Alignment:
Q  594 cttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttg 693  Q
    ||||||||||||||  |||  ||||||||||||||||||||||||||  ||||| |||||| |||||||||||||  ||||  |||||||  || |||||    
T  40841995 cttaaacacacttttcaccctctaagtttgcaaaagttgcaattttggtccccttttaaaaaaaatggcaaaagtgaccccctatgtttacccctttttg 40842094  T
Q  694 caaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    ||||||  ||||||| |||  |||||   |||||||||||||||    
T  40842095 caaaacctcaattttgactcagtcaactatatgtgtcatgccac 40842138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 616 - 707
Target Start/End: Complemental strand, 40843164 - 40843073
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattt 707  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||||||  ||   |||||||| |||||||||| ||||||||||||    
T  40843164 taagtttgcaaaagttgcaattttgacctccttttaaaaaaaatggcaaaagtgaccttccatgtttattcccttttgcgaaacaccaattt 40843073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 591 - 692
Target Start/End: Original strand, 18703216 - 18703318
Alignment:
Q  591 aggcttaaacacactttgtacctcc-taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||||||||| |||| || |||||||||||| |||||||||||| ||| ||||||||| |||||||||||||  ||||| |||||||  ||||    
T  18703216 aggcttaaacacactttttacccccctaagtttgcaaacgttgcaattttggccctctattaaaaaaaatggcaaaagtgacccctaatgtttaccccct 18703315  T
Q  690 ttt 692  Q
    |||    
T  18703316 ttt 18703318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 55327571 - 55327506
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||    
T  55327571 tgatgtaagatttttacatatcataaaactatttacacgtaagtataatatgatcgtttccgcagg 55327506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 930 - 986
Target Start/End: Original strand, 26372993 - 26373049
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  26372993 tgatgtaagatttttacatttcataaaactatttacacgtaagtatgataggatcgt 26373049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 930 - 986
Target Start/End: Complemental strand, 52619302 - 52619246
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  52619302 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataacaggatcgt 52619246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 581 - 708
Target Start/End: Original strand, 34369653 - 34369779
Alignment:
Q  581 aatatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgt 680  Q
    |||||||||| |||| |||| |||||| | || ||||||||||||||||||| |||||| |||||||||||||| ||| || ||||||  ||||| ||||    
T  34369653 aatatttttatggctaaaacgcactttttgccccctaagtttgcaaaagttgtaatttttaccccctattaaaa-aaaaggtaaaagtgaccccttatgt 34369751  T
Q  681 ttagtcccttttgcaaaacaccaatttt 708  Q
    ||||  |||| ||||||||  |||||||    
T  34369752 ttagcaccttctgcaaaacctcaatttt 34369779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 44428759 - 44428817
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44428759 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 44428817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 927 - 995
Target Start/End: Original strand, 19730879 - 19730947
Alignment:
Q  927 ccatgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||| | ||||||||| |||||||||||| || ||| ||||||||||||||||||||||||||||    
T  19730879 ccatgatgaaggatttttacctctcataaaacttttcacatgtaagtataataggatcgtgtccacagg 19730947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 616 - 736
Target Start/End: Complemental strand, 46171507 - 46171390
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttgg 715  Q
    |||||||| |||||||||||||||| |||| |||||||| |||||||||||  |  ||||| ||||||| |||||||||||||||| |||||| || |||    
T  46171507 taagtttgtaaaagttgcaattttggcccc-tattaaaa-aaatggcaaaaa-cgaccctcgtgtttagccccttttgcaaaacactaattttgacctgg 46171411  T
Q  716 tcaaacctatgtgtcatgcca 736  Q
    |||| |||||| |||| ||||    
T  46171410 tcaatcctatgcgtcacgcca 46171390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 595 - 708
Target Start/End: Original strand, 31182620 - 31182734
Alignment:
Q  595 ttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctatt-aaaacaaatggcaaaagtcccccctcatgtttagtcccttttg 693  Q
    ||||||||||||| || | |||||||||| |||||||| |||||||  ||||| || |||| |||||||||||||  ||| |||||||||  ||||| ||    
T  31182620 ttaaacacactttttaacccctaagtttgtaaaagttgtaattttggtccccttttaaaaaaaaatggcaaaagtgacccttcatgtttacccccttctg 31182719  T
Q  694 caaaacaccaatttt 708  Q
    |||||| ||||||||    
T  31182720 caaaaccccaatttt 31182734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 615 - 761
Target Start/End: Original strand, 39701546 - 39701691
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttg 714  Q
    |||||||| ||||| ||||||||||| |||| | |||||| |||||| ||||||  |||  ||||||||| ||||||| ||||||  ||||||| ||       
T  39701546 ctaagttttcaaaaattgcaattttggcccctt-ttaaaaaaaatggtaaaagtgaccctccatgtttagccccttttacaaaacctcaattttgaccca 39701644  T
Q  715 gtcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgt 761  Q
     |||| ||||||||||||||||| ||| ||||| | |||||||||||    
T  39701645 atcaatcctatgtgtcatgccacctaatttaaatatttgccaactgt 39701691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 591 - 668
Target Start/End: Original strand, 1960894 - 1960971
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||| |||| |||||| ||||   ||||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  1960894 aggctaaaacgcactttttacccattaagtttgcaaaagttgcaattttggcaccctattaaaaaaaatggcaaaagt 1960971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 590 - 695
Target Start/End: Complemental strand, 2421030 - 2420926
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    |||||||||||||||||| ||||   |||||||||||||||||||||||| ||||| |||||||| ||| || ||||||  |||| ||||| ||  ||||    
T  2421030 aaggcttaaacacactttctaccctttaagtttgcaaaagttgcaattttaaccccttattaaaa-aaaaggtaaaagtgaccccccatgtctaccccct 2420932  T
Q  690 tttgca 695  Q
    ||||||    
T  2420931 tttgca 2420926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 40994909 - 40994974
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||  |||||||||| |||||||||||||||||||||||||||||| |||||| || |||||    
T  40994909 tgatgtagtatttttacatgtcataaaactatttacacgtaagtataataagatcgtttctacagg 40994974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 930 - 986
Target Start/End: Complemental strand, 1188764 - 1188708
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||    
T  1188764 tgatgtaagatttttacatgtattaaaactatttacacgttagtataataggatcgt 1188708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 592 - 668
Target Start/End: Complemental strand, 18667374 - 18667298
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||| ||||| ||||   || |||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  18667374 ggcttaaacatactttttaccctttatgtttgcaaaagttgcaattttggcccccttttaaaaaaaatggcaaaagt 18667298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 586 - 708
Target Start/End: Original strand, 10614797 - 10614915
Alignment:
Q  586 ttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagt 685  Q
    |||| |||||||||| ||| || | ||  |||||||||||||||||||||||||| |||||| |||||| |||||||||||||  |||  ||||| ||      
T  10614797 tttttaggcttaaacgcacattttgccctctaagtttgcaaaagttgcaattttggccccctgttaaaa-aaatggcaaaagtgaccc--catgtcta-c 10614892  T
Q  686 cccttttgcaaaacaccaatttt 708  Q
    ||||||||||||||| |||||||    
T  10614893 cccttttgcaaaacatcaatttt 10614915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 614 - 737
Target Start/End: Complemental strand, 40874092 - 40873970
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaactt 713  Q
    ||||||||||||||||||||||||||| |  |||||||||| |||||||||||| |  ||| ||||||||  ||||||| ||||||  ||| ||| || |    
T  40874092 cctaagtttgcaaaagttgcaattttggctacctattaaaaaaaatggcaaaag-cgacccccatgtttacccccttttacaaaacctcaactttgacct 40873994  T
Q  714 ggtcaaacctatgtgtcatgccac 737  Q
    ||||||   || ||||||||||||    
T  40873993 ggtcaacgttacgtgtcatgccac 40873970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 593 - 668
Target Start/End: Original strand, 46170300 - 46170374
Alignment:
Q  593 gcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||| |||||| ||||||||||||||||  ||||||||||||||   ||||||||||| |||||||||||||    
T  46170300 gcttaaacccactttttacctcctaagtttgcggaagttgcaattttg-gtccctattaaaaaaaatggcaaaagt 46170374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 324231 - 324173
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||    
T  324231 gatttttacctctcataaaactatttacacatgagtatatataggatcgtgtccacagg 324173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 26070527 - 26070462
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||||||| |||||| |  ||||||||||||||||| |||||||||||||||| ||| ||||    
T  26070527 tgatgtaagattcttacatgtattaaaactatttacacgtgagtataataggatcgtttccgcagg 26070462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 591 - 668
Target Start/End: Original strand, 34155897 - 34155973
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||||  |||| | |||||| |||||| ||||||    
T  34155897 aggcttaaacacactttttaccccctaagtttacaaaagttgcaattttagccccattttaaaa-aaatgggaaaagt 34155973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 689 - 749
Target Start/End: Complemental strand, 7035869 - 7035809
Alignment:
Q  689 ttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaa 749  Q
    |||| ||||||||||||||| |||| ||||||||||| ||||||||||| ||| |||||||    
T  7035869 ttttacaaaacaccaattttgacttagtcaaacctatatgtcatgccacataagttaaaaa 7035809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 930 - 986
Target Start/End: Original strand, 30217749 - 30217804
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||| ||||||    
T  30217749 tgatgtaagatttttacatgtcataaacc-atttacacgtaagtataataagatcgt 30217804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 612 - 654
Target Start/End: Original strand, 51291006 - 51291048
Alignment:
Q  612 ctcctaagtttgcaaaagttgcaattttgaccccctattaaaa 654  Q
    |||||||||||  ||||||||||||||||||||||||||||||    
T  51291006 ctcctaagttttaaaaagttgcaattttgaccccctattaaaa 51291048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 2419675 - 2419728
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||| ||||||||    
T  2419675 ctaagtttgcaaaagttacaatttttgccccctattaaaaaaaatagcaaaagt 2419728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 25618877 - 25618824
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| |||||||||||||||||||||||| | |||||||||||||    
T  25618877 ctaagtttcaaaatgttgcaattttgaccccctattaagaaaaatggcaaaagt 25618824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 683
Target Start/End: Complemental strand, 39702694 - 39702629
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgttta 683  Q
    ||||||||||||||||||||||||||  ||||||||||| | |||| ||||||   ||||||||||||    
T  39702694 taagtttgcaaaagttgcaattttga--ccctattaaaaaatatggtaaaagtgatccctcatgttta 39702629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 930 - 986
Target Start/End: Original strand, 46691400 - 46691455
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| | ||||| ||||||||| || ||||||||||||||||    
T  46691400 tgatgtaagatttttacatgtgataaa-ctatttacatgtgagtataataggatcgt 46691455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 668
Target Start/End: Original strand, 55780411 - 55780463
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||| |||| ||||| |||||| ||||||||||||| |||||||||||||    
T  55780411 taagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 55780463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 668
Target Start/End: Original strand, 55844591 - 55844643
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||| |||| ||||| |||||| ||||||||||||| |||||||||||||    
T  55844591 taagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 55844643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 635 - 718
Target Start/End: Original strand, 16217232 - 16217315
Alignment:
Q  635 attttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtca 718  Q
    ||||||| |||||||| ||| ||||||| |||| ||||   |||||||||| | |||||||||||| ||||||| |||| ||||    
T  16217232 attttgatcccctatttaaaaaaatggccaaagaccccttccatgtttagttctttttgcaaaacatcaattttgacttagtca 16217315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 930 - 985
Target Start/End: Complemental strand, 20949546 - 20949492
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcg 985  Q
    ||||||||||||||||||| |||| |||||||||||| || ||||||||| |||||    
T  20949546 tgatgtaagatttttacatgtcat-aaactatttacatgtgagtataataagatcg 20949492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 668
Target Start/End: Original strand, 41034673 - 41034712
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  41034673 gttgcaattttgaccccttattaaaaaaaatggcaaaagt 41034712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 630 - 668
Target Start/End: Complemental strand, 13397941 - 13397903
Alignment:
Q  630 ttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  13397941 ttgcaattttggccccctattaaaaaaaatggcaaaagt 13397903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 19247190 - 19247256
Alignment:
Q  930 tgatgtaagattttt-acatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||| |||| |  ||||||||||||||||| ||||||||| |||||| ||| ||||    
T  19247190 tgatgtaagattttttacatgtattaaaactatttacacgtgagtataataagatcgtttccgcagg 19247256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 668
Target Start/End: Original strand, 25011757 - 25011811
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  25011757 cctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 25011811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 2e-33; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 590 - 719
Target Start/End: Original strand, 42700948 - 42701077
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    |||||||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| |  ||||| ||| |||| ||||    
T  42700948 aaggcttaaacaaactttttaccccctaagtttgcaaaggttgcaattttgaccccctattaaaaaaaatggcaaaaatgaccccttatgcttagcccct 42701047  T
Q  690 tttgcaaaacaccaattttaacttggtcaa 719  Q
    |||||||||| |||||||| || |||||||    
T  42701048 tttgcaaaaccccaattttgacctggtcaa 42701077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 614 - 759
Target Start/End: Original strand, 3453357 - 3453502
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaactt 713  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||  ||||| |||||||| ||||| ||||||||  ||||||| ||      
T  3453357 cctaagtttgcaaaagttgaaattttgaccccctattaaaaaaaaaggcaaaagtgaccccttatgtttagccccttctgcaaaacctcaattttgaccc 3453456  T
Q  714 ggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaact 759  Q
     ||||| | ||||||||||||||| ||| ||||||| |||||||||    
T  3453457 agtcaatcttatgtgtcatgccacctaatttaaaaatttgccaact 3453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 591 - 708
Target Start/End: Original strand, 20126184 - 20126301
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||| |||| |||||| | || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||||||||||||| |||||    
T  20126184 aggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgacccctcatgtttagcccctt 20126283  T
Q  691 ttgcaaaacaccaatttt 708  Q
     ||||||||  |||||||    
T  20126284 ctgcaaaacctcaatttt 20126301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 8679157 - 8679222
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8679157 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtttccacagg 8679222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 592 - 749
Target Start/End: Complemental strand, 30796299 - 30796142
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    ||||||||  ||||||  ||| |||||||||  |||||| || |||||||||| ||||||||| ||||||  |||| |||||  || |||||  ||||||    
T  30796299 ggcttaaatccacttttgaccccctaagttttaaaaagtagcgattttgaccctctattaaaaaaaatggtcaaagaccccctccaagtttaaccccttt 30796200  T
Q  692 tgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaa 749  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||| ||| |||||||    
T  30796199 tgcaaaacaccgattttgacttagtcaaacctatgtgtcatgccacataagttaaaaa 30796142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 590 - 719
Target Start/End: Complemental strand, 20127411 - 20127282
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||  |||||| |||| | ||||||| |||| |||||||||||| ||||||||||||| |||||||||||||  ||||| |||||||  ||||    
T  20127411 aaggcttaaatgcactttttaccccttaagtttacaaaggttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttatcccct 20127312  T
Q  690 tttgcaaaacaccaattttaacttggtcaa 719  Q
    ||||||||||  ||||||| ||| ||||||    
T  20127311 tttgcaaaacctcaattttgactcggtcaa 20127282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 591 - 667
Target Start/End: Original strand, 27848335 - 27848411
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  27848335 aggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaag 27848411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 610 - 736
Target Start/End: Original strand, 30793863 - 30793990
Alignment:
Q  610 acctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaa-tggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaatttt 708  Q
    |||||||||||||  |||||| || |||||| ||||||||||||| ||| |||  |||| |||||  || |||||| ||||||||||||||| |||||||    
T  30793863 acctcctaagttttaaaaagtagcgattttggccccctattaaaaaaaaatggtcaaagaccccctccaagtttagccccttttgcaaaacatcaatttt 30793962  T
Q  709 aacttggtcaaacctatgtgtcatgcca 736  Q
     |||| ||||||||||||||||||||||    
T  30793963 gacttagtcaaacctatgtgtcatgcca 30793990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 31759078 - 31759013
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  31759078 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 31759013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 42700336 - 42700401
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  42700336 tgatgtaggatttttacatctcataaaactatttacacgtaagtataataggatcgtttccgcagg 42700401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 591 - 699
Target Start/End: Complemental strand, 27849442 - 27849335
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||   |||| |||||||   |||||    
T  27849442 aggcttaaactcactttttacctcctaagtttgtaaaagttgcaattttagccccctattaaaa-aaatggcaaaagctaccccccatgttttccccctt 27849344  T
Q  691 ttgcaaaac 699  Q
    |||||||||    
T  27849343 ttgcaaaac 27849335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 589 - 712
Target Start/End: Original strand, 3627612 - 3627735
Alignment:
Q  589 taaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccc 688  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||||||||||| | || ||||| ||||||||||| |  ||||| |||||||   ||    
T  3627612 taaggcttaaacacactttttaccccttaagtttgcaaaagttgcaattttgacctcttaataaaaaaaatggcaaaaatgacccctaatgtttacctcc 3627711  T
Q  689 ttttgcaaaacaccaattttaact 712  Q
    ||||  ||||  ||||||||||||    
T  3627712 ttttataaaattccaattttaact 3627735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 930 - 993
Target Start/End: Original strand, 13229704 - 13229767
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccaca 993  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  13229704 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataatatgatcgtttccaca 13229767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 602 - 708
Target Start/End: Original strand, 26068901 - 26069007
Alignment:
Q  602 cactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacac 701  Q
    |||||| |||| | ||||||||||||||||||||||||| ||||||||||||| |||||||||||||   |||  |||||||  ||||||||||||||      
T  26068901 cactttttaccccttaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgatcccctatgtttacccccttttgcaaaacgt 26069000  T
Q  702 caatttt 708  Q
    |||||||    
T  26069001 caatttt 26069007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 932 - 986
Target Start/End: Complemental strand, 28006882 - 28006828
Alignment:
Q  932 atgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28006882 atgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgt 28006828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 591 - 668
Target Start/End: Complemental strand, 24607838 - 24607761
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||| ||||||||||| | || |||||||||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  24607838 aggctaaaacacactttttgccccctaagtttgcaaaggttgcaattttggccccctattaaaaaaaatggcaaaagt 24607761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 602 - 667
Target Start/End: Complemental strand, 33076302 - 33076237
Alignment:
Q  602 cactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  33076302 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaag 33076237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 36556924 - 36556989
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||    
T  36556924 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataatatgatcgtttccgcagg 36556989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 591 - 708
Target Start/End: Complemental strand, 42702175 - 42702058
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| |||||| |||| | ||||||| |||| ||||||||||||  |||||||||||| ||||||||||||   ||||| |||||||  |||||    
T  42702175 aggcttaaacgcactttttaccccttaagtttacaaaggttgcaattttggtcccctattaaaaaaaatggcaaaagcgaccccttatgtttatcccctt 42702076  T
Q  691 ttgcaaaacaccaatttt 708  Q
    |||||||||  |||||||    
T  42702075 ttgcaaaacctcaatttt 42702058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 929 - 986
Target Start/End: Complemental strand, 43992313 - 43992256
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43992313 atgatgtatgatttttacatgtcataaaactatttacacgtaagtataataggatcgt 43992256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 614 - 708
Target Start/End: Complemental strand, 3454481 - 3454386
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctatt-aaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaatttt 708  Q
    ||||||||||||||||||| ||||||| ||||||||| |||| |||||||||||||  ||||| |||||||| ||||| ||||||||  |||||||    
T  3454481 cctaagtttgcaaaagttgtaattttggccccctattaaaaaaaaatggcaaaagtgaccccttatgtttagccccttctgcaaaacctcaatttt 3454386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 938 - 993
Target Start/End: Original strand, 36039632 - 36039687
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccaca 993  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36039632 gatttttccatctcataaaactatttacacgtaagtataataggatcgtgttcaca 36039687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 9783634 - 9783699
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||| ||||    
T  9783634 tgatgtaagattattacatgtcataaaactctttacacgtaagtataataggatcgtttccgcagg 9783699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 14701444 - 14701379
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  14701444 tgatgtaatatttttacatgtcataaaactatttacacgtaagtataattggatcgtttccgcagg 14701379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 930 - 979
Target Start/End: Complemental strand, 27258184 - 27258135
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataata 979  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27258184 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataata 27258135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 28457239 - 28457304
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||    
T  28457239 tgatgtaatatttttacatgtcataaaactatttacacgtaagtataatatgatcgtttccgcagg 28457304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 930 - 986
Target Start/End: Original strand, 23924394 - 23924450
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  23924394 tgatgtaagatttgtacatgtcataaaactatttacacgtgagtataataggatcgt 23924450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 930 - 986
Target Start/End: Original strand, 24662489 - 24662545
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  24662489 tgatgtaagatttttacatgtcatataactatttacacgtgagtataataggatcgt 24662545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 592 - 667
Target Start/End: Original strand, 33075186 - 33075260
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||||||  ||||| ||||||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||    
T  33075186 ggcttaaacttactttttacctcctaagtttgtaaaagttgtaattttgaccctctattaaaa-aaatggcaaaag 33075260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 29224507 - 29224449
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  29224507 gatttttacctctcataaaactatttacacgtgagtatatataggatcgtgtccacagg 29224449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 29337806 - 29337748
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  29337806 gatttttacctctcataaaactatttacacgtgagtatatataggatcgtgtccacagg 29337748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 928 - 995
Target Start/End: Original strand, 36667248 - 36667315
Alignment:
Q  928 catgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||||| |  |||||||||||||| || |||||||||||||||| ||| ||||    
T  36667248 catgatgtaagatttttacatgtattaaaactatttacatgtgagtataataggatcgtttccgcagg 36667315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 669 - 731
Target Start/End: Complemental strand, 21004627 - 21004565
Alignment:
Q  669 cccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtca 731  Q
    |||||||||||||||| | |||||||||||||| |||||| ||||||||||  ||||||||||    
T  21004627 cccccctcatgtttagcctcttttgcaaaacactaattttgacttggtcaatactatgtgtca 21004565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 929 - 979
Target Start/End: Complemental strand, 32523731 - 32523681
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataata 979  Q
    |||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  32523731 atgatgtaagatttttacatgtcataaaattatttacacgtaactataata 32523681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 719
Target Start/End: Complemental strand, 3149259 - 3149155
Alignment:
Q  612 ctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaac 711  Q
    |||||||||||||| | |||||||||||| |||| | |||||| |||||||||||||  |||  | ||| || |||||||||||||||  ||||||| ||    
T  3149259 ctcctaagtttgcataggttgcaattttggccccgtgttaaaaaaaatggcaaaagtgaccc--cgtgtcta-tcccttttgcaaaacgtcaattttgac 3149163  T
Q  712 ttggtcaa 719  Q
    ||||||||    
T  3149162 ttggtcaa 3149155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 615 - 742
Target Start/End: Complemental strand, 3628146 - 3628018
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaa-tggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaactt 713  Q
    |||||||||||||||| | |||||||   || |||||||| ||| | |||||| |  |||||||| |||   ||||||||||||||  ||||||||||||    
T  3628146 ctaagtttgcaaaagtagtaattttggttccatattaaaaaaaaatagcaaaaatgacccctcatatttgcccccttttgcaaaacctcaattttaactt 3628047  T
Q  714 ggtcaaacctatgtgtcatgccacttaac 742  Q
     ||||| || |||||||||||||| ||||    
T  3628046 agtcaagcccatgtgtcatgccacataac 3628018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 9051308 - 9051255
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  9051308 ctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagt 9051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 668
Target Start/End: Original strand, 9787597 - 9787635
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  9787597 gttgcaattttgaccccctattaaaa-aaatggcaaaagt 9787635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 668
Target Start/End: Complemental strand, 30714541 - 30714502
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  30714541 gttgcaattttggccccctattaaaaaaaatggcaaaagt 30714502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 666
Target Start/End: Complemental strand, 34388097 - 34388018
Alignment:
Q  587 tttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaa 666  Q
    |||||||||||||| || ||| || | | |||||||||||||| || |||||||||| ||| |||||| |||| ||||||    
T  34388097 tttaaggcttaaactcattttttatcccttaagtttgcaaaagctgtaattttgacctccttttaaaaaaaatagcaaaa 34388018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 11175930 - 11175983
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  11175930 ctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 11175983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 611 - 664
Target Start/End: Complemental strand, 11176192 - 11176139
Alignment:
Q  611 cctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaa 664  Q
    ||||||| ||||  ||| ||||| |||||||||||||||||||| |||||||||    
T  11176192 cctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaa 11176139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 18538109 - 18538056
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  18538109 ctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 18538056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 595 - 708
Target Start/End: Original strand, 34386869 - 34386982
Alignment:
Q  595 ttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgc 694  Q
    ||||| ||||||| |||| |||||||||| || | |||||||||||   |||| |||||| |||||| |||| |  |||  ||| ||||  |||||||||    
T  34386869 ttaaatacactttttaccgcctaagtttggaacaattgcaattttggttcccttttaaaaaaaatggtaaaaatgaccctccatatttacccccttttgc 34386968  T
Q  695 aaaacaccaatttt 708  Q
    ||||| ||||||||    
T  34386969 aaaaccccaatttt 34386982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 38716217 - 38716269
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  38716217 ctaagttttaaaatgttgcgattttgaccccctattaaaa-aaatggcaaaagt 38716269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 1e-31; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 589 - 719
Target Start/End: Original strand, 20583014 - 20583144
Alignment:
Q  589 taaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccc 688  Q
    ||||||||||||||||||| || | |||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||||||| |||  |||    
T  20583014 taaggcttaaacacactttttatcccctaagtttggaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagtgacccctcatgattatcccc 20583113  T
Q  689 ttttgcaaaacaccaattttaacttggtcaa 719  Q
    ||||| |||||  ||||||| || |||||||    
T  20583114 ttttgtaaaacttcaattttgacctggtcaa 20583144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 592 - 708
Target Start/End: Complemental strand, 20584032 - 20583917
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    |||||||||  ||||| ||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||| |||| | |||||    
T  20584032 ggcttaaacgtactttttaccctctaagtttgcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagtgacccctcatatttact-ccttt 20583934  T
Q  692 tgcaaaacaccaatttt 708  Q
    |||||||| ||||||||    
T  20583933 tgcaaaactccaatttt 20583917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 590 - 698
Target Start/End: Original strand, 15976610 - 15976718
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||   |||| |||||||   ||||    
T  15976610 aaggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttgacaccctattaaaaaaaatggcaaaagctaccccccatgttttccccct 15976709  T
Q  690 tttgcaaaa 698  Q
    |||||||||    
T  15976710 tttgcaaaa 15976718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 591 - 737
Target Start/End: Original strand, 20891805 - 20891951
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||| ||||||||||| | || |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||  |||| ||||| ||  |||||    
T  20891805 aggctaaaacacactttttgccccctaagtttgcagaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccccatgtctaccccctt 20891904  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    |||||||||  ||||||| |||  ||||| | |||||| || |||||    
T  20891905 ttgcaaaacgtcaattttgactcagtcaaccatatgtggcacgccac 20891951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 8667731 - 8667666
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8667731 tgatgaaagatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 8667666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 614 - 742
Target Start/End: Original strand, 14455050 - 14455178
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaactt 713  Q
    |||||||||  |||||| ||||||||| ||||||||||||| ||||||||||| |  ||| ||||||||   ||||||||||||||  ||||||| ||||    
T  14455050 cctaagtttctaaaagtagcaattttggccccctattaaaaaaaatggcaaaaatgacccttcatgtttgcccccttttgcaaaacctcaattttgactt 14455149  T
Q  714 ggtcaaacctatgtgtcatgccacttaac 742  Q
     ||||| ||||||||||||||||| ||||    
T  14455150 agtcaagcctatgtgtcatgccacataac 14455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 32806125 - 32806190
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  32806125 tgatgtaagatttttacatgtcataaaactatttacacgtaagtatgataggatcgtttccacagg 32806190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 583 - 698
Target Start/End: Complemental strand, 14456258 - 14456144
Alignment:
Q  583 tatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgttt 682  Q
    |||| ||||||||||||| |||||| |||| || ||||||||||||||| ||||||||  |||||||||||| |||||||||||||  ||||| ||||||    
T  14456258 tattattaaggcttaaacgcactttttacccccaaagtttgcaaaagttacaattttg-gcccctattaaaaaaaatggcaaaagtgacccctaatgttt 14456160  T
Q  683 agtcccttttgcaaaa 698  Q
    |  ||||||| |||||    
T  14456159 acccccttttacaaaa 14456144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 929 - 983
Target Start/End: Complemental strand, 14479902 - 14479848
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataataggat 983  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14479902 atgatgtaagatttttacatctcataaaactatttacatgtaagtataataggat 14479848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 592 - 698
Target Start/End: Complemental strand, 26444914 - 26444808
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    ||||||||| ||||||  |||  |||||||||||||||| |||||||| |||||||||||||| ||||||||||||   |||| ||||||||  ||||||    
T  26444914 ggcttaaacccacttttcaccctctaagtttgcaaaagtagcaattttaaccccctattaaaaaaaatggcaaaagcgaccccccatgtttacccccttt 26444815  T
Q  692 tgcaaaa 698  Q
    |||||||    
T  26444814 tgcaaaa 26444808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 21595890 - 21595955
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| ||||    
T  21595890 tgatgtaagatttttacatgtcataaaactatttacacgtgagtataataggatcgtttccgcagg 21595955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 590 - 654
Target Start/End: Complemental strand, 15981078 - 15981014
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaa 654  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  15981078 aaggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaa 15981014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 591 - 730
Target Start/End: Complemental strand, 21844417 - 21844279
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| ||||||  ||| |||||||||   || || || |||||| | |||| |||||| |||||||||||| | |||| ||||||||||| |||    
T  21844417 aggcttaaacccacttttgaccccctaagtttcataatgtagcgattttggctcccttttaaaa-aaatggcaaaagacaccccccatgtttagtctctt 21844319  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtc 730  Q
    ||||||||  |||||||| |||||||||| ||||||||||    
T  21844318 ttgcaaaatcccaattttgacttggtcaatcctatgtgtc 21844279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 615 - 698
Target Start/End: Original strand, 26444509 - 26444592
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaa 698  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||  |||| ||||||||   ||||||||||||    
T  26444509 ctaagtttgcaaaagtagcaattttggccccctattaaaaaaaatggcaaaagtgaccccccatgtttacctccttttgcaaaa 26444592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 5670638 - 5670704
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  5670638 tgatgtaggatttttacctctcataaaactatttacacgtgagtatatataggatcgtgtccacagg 5670704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 9932166 - 9932232
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  9932166 tgatgaaagatttttacctctcataaaactctttacacgtaagtatatataggatcgtgtccacagg 9932232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 938 - 993
Target Start/End: Complemental strand, 3539840 - 3539784
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccaca 993  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  3539840 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccaca 3539784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 632 - 764
Target Start/End: Original strand, 21843189 - 21843321
Alignment:
Q  632 gcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtca 731  Q
    ||||||||| |||||| ||||||  ||||||||||| | ||| ||||||||| ||||||| ||||||| |||||||| |||   |||| |||||||||||    
T  21843189 gcaattttggcccccttttaaaaagaatggcaaaagacacccttcatgtttactccctttagcaaaaccccaattttgactaaatcaatcctatgtgtca 21843288  T
Q  732 tgccacttaacttaaaaaattgccaactgtgta 764  Q
     ||||| ||| || |||| ||| || |||||||    
T  21843289 cgccacataattttaaaagttgacagctgtgta 21843321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 930 - 986
Target Start/End: Original strand, 24160616 - 24160672
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  24160616 tgatgtaagatttttacatgtcataaaactattaacatgtaagtataataggatcgt 24160672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 938 - 993
Target Start/End: Complemental strand, 16698701 - 16698646
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccaca 993  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  16698701 gatttttccatctcataaaactatttacacgtgagtataataggattgtgtccaca 16698646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 929 - 995
Target Start/End: Original strand, 25055918 - 25055984
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||| |||||| ||| ||||    
T  25055918 atgatgtaagatttttacatgtattaaaactatttacacgtaagtataataagatcgtttccgcagg 25055984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 930 - 986
Target Start/End: Complemental strand, 6778355 - 6778299
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||| ||||||    
T  6778355 tgatgtaagatttttacatgtcataaaactatttacatgtgagtataatatgatcgt 6778299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 930 - 993
Target Start/End: Original strand, 26514789 - 26514853
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccaca 993  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  26514789 tgatgaaagatatttacctctcataaaactatttacacgtaagtatatataggatcttgtccaca 26514853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 591 - 736
Target Start/End: Original strand, 3488033 - 3488174
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| |||||| || | ||||||||||||||||| | |||||||  ||||| |||||| |||||||||||||  |||  ||||||||  || ||    
T  3488033 aggcttaaacgcactttttatcccctaagtttgcaaaagtagaaattttggtccccttttaaaa-aaatggcaaaagtgaccc--catgttta-cccttt 3488128  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    |||||||||  ||||||| |||| ||||| ||||  ||||||||||    
T  3488129 ttgcaaaacttcaattttgactttgtcaatcctacatgtcatgcca 3488174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 930 - 984
Target Start/End: Complemental strand, 15643203 - 15643149
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatc 984  Q
    ||||||||||||||||||| ||||| || ||||||||||| |||||||| |||||    
T  15643203 tgatgtaagatttttacatgtcatataagtatttacacgtgagtataattggatc 15643149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 670 - 764
Target Start/End: Original strand, 19758319 - 19758413
Alignment:
Q  670 ccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgtgta 764  Q
    |||||| |||||||  || ||||| ||||||||||||||||||||||||| | ||| | ||||| ||||  || |||||| ||||||||| ||||    
T  19758319 cccccttatgtttaacccattttgtaaaacaccaattttaacttggtcaatcatatttatcatgtcactcgacataaaaagttgccaactttgta 19758413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 708
Target Start/End: Complemental strand, 646871 - 646759
Alignment:
Q  595 ttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgc 694  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||  | |||| |||||| ||| ||||||||   |||  ||||||||  || ||||||    
T  646871 ttaaacacactttttacc-cttaagtttgcaaaagttgcaattttagctcccttttaaaaaaaaaggcaaaagggaccctccatgtttaccccattttgc 646773  T
Q  695 aaaacaccaatttt 708  Q
    ||||  ||||||||    
T  646772 aaaatcccaatttt 646759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 668
Target Start/End: Original strand, 4370897 - 4370974
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||| |||| |  ||| ||||||||||||||||| || |||||| || ||| |||||| |||||||||||||    
T  4370897 aggcttaaacgcactattcaccccctaagtttgcaaaagtagcgattttggcctccttttaaaaaaaatggcaaaagt 4370974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 18749409 - 18749356
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  18749409 ctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagt 18749356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 25819708 - 25819761
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| |||||||||||| ||||||||||||| |||||||||||||    
T  25819708 ctaagttttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagt 25819761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 651 - 731
Target Start/End: Complemental strand, 29011623 - 29011543
Alignment:
Q  651 aaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtca 731  Q
    |||| |||| |||||||||| ||||||||||||| || |||| ||||||| ||||||| || |||| ||  ||||||||||    
T  29011623 aaaaaaaatagcaaaagtcctccctcatgtttagcccattttacaaaacatcaattttgacctggtaaattctatgtgtca 29011543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 5e-31; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 588 - 724
Target Start/End: Complemental strand, 35960264 - 35960130
Alignment:
Q  588 ttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcc 687  Q
    ||||||||||||| |||||| |||| ||||| ||||||||||||||||||||  ||||||||||||| |||||||||||||  |||  ||||||||| ||    
T  35960264 ttaaggcttaaacccactttttaccccctaattttgcaaaagttgcaattttagccccctattaaaaaaaatggcaaaagtgaccc--catgtttagccc 35960167  T
Q  688 cttttgcaaaacaccaattttaacttggtcaaaccta 724  Q
    ||||||||||||  ||||||| |||||||||| ||||    
T  35960166 cttttgcaaaacgtcaattttgacttggtcaagccta 35960130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 591 - 719
Target Start/End: Original strand, 17352889 - 17353016
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| || | ||||||||||||||||||| ||||||| | ||||||||||| |||||| ||||||  |||||||||||||  |||||    
T  17352889 aggcttaaacacactttttatcccctaagtttgcaaaagttgtaattttggcgccctattaaaa-aaatggtaaaagtgacccctcatgtttaccccctt 17352987  T
Q  691 ttgcaaaacaccaattttaacttggtcaa 719  Q
    ||||||||| |||||||| ||||||||||    
T  17352988 ttgcaaaactccaattttgacttggtcaa 17353016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 592 - 738
Target Start/End: Complemental strand, 40659364 - 40659219
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||||  |||||| |||||| |||||||||||||  ||| |||||||||| || |||    
T  40659364 ggcttaaacacatttt-tacctcctatgtttgcaaaagttgcaattttagcccccttttaaaaaaaatggcaaaagtggcccttcatgtttagcccattt 40659266  T
Q  692 tgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccact 738  Q
    |||||||| |||||||| || |||||||  | |||||||| ||||||    
T  40659265 tgcaaaactccaattttgacctggtcaacgccatgtgtcaagccact 40659219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 591 - 708
Target Start/End: Complemental strand, 7314308 - 7314191
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||  |||  ||||||||  |||||    
T  7314308 aggcttaaacacactttttaccccctaagtttgcaaaagttgcaattttggcccccttttaaaaaaaatggcaaaagtgaccctccatgtttatcccctt 7314209  T
Q  691 ttgcaaaacaccaatttt 708  Q
    || ||||||  |||||||    
T  7314208 ttacaaaacctcaatttt 7314191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 615 - 708
Target Start/End: Complemental strand, 17353908 - 17353815
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaatttt 708  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||||||||||  |||||||||||||  |||||||||||||| ||||||||    
T  17353908 ctaagtttgcaaaagttacaattttggccccctattaaaaaaaatggcaaaagtgacccctcatgtttacccccttttgcaaaactccaatttt 17353815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 579 - 737
Target Start/End: Original strand, 42337058 - 42337214
Alignment:
Q  579 acaatatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcat 678  Q
    ||||||||||  |||||||||| |||||| |||| ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||   |||| |||    
T  42337058 acaatatttt--aggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggcaccctattaaaaaaaatggcaaaagctaccccccat 42337155  T
Q  679 gtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    ||||   |||||||||||||  |||||||| ||   ||||| | |||||| ||||||||    
T  42337156 gttttcccccttttgcaaaatgccaattttgaccgagtcaaccatatgtggcatgccac 42337214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 591 - 708
Target Start/End: Complemental strand, 16957320 - 16957203
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||   |||  |||||||  |||||    
T  16957320 aggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgatcccctatgtttaccccctt 16957221  T
Q  691 ttgcaaaacaccaatttt 708  Q
    |||||||||  |||||||    
T  16957220 ttgcaaaacgtcaatttt 16957203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 2478460 - 2478395
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  2478460 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 2478395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 595 - 724
Target Start/End: Complemental strand, 4436180 - 4436052
Alignment:
Q  595 ttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgc 694  Q
    ||||||||| ||| |||| | |||||||  |||||| || |||||| || | | |||||| |||||||||||||| || ||||||||||| |||||||||    
T  4436180 ttaaacacaatttttaccccttaagttttaaaaagtagcgattttggccgctttttaaaaaaaatggcaaaagtcacctctcatgtttag-cccttttgc 4436082  T
Q  695 aaaacaccaattttaacttggtcaaaccta 724  Q
    |||||||||||||||| |||||||| ||||    
T  4436081 aaaacaccaattttaatttggtcaagccta 4436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 8107258 - 8107315
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8107258 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 8107315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 10345676 - 10345733
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10345676 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 10345733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 12089821 - 12089886
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  12089821 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 12089886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 19471604 - 19471661
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19471604 gatttttccatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 19471661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 23795885 - 23795828
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23795885 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 23795828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 31879398 - 31879333
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  31879398 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 31879333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 592 - 728
Target Start/End: Original strand, 8955972 - 8956108
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    ||||||||| ||||||  ||| ||||| |||  |||||| || |||||| ||||||||||||| ||||||| |||| |||||  || |||||  ||||||    
T  8955972 ggcttaaacccacttttgaccccctaaatttaaaaaagtagcgattttggccccctattaaaaaaaatggccaaagaccccctccaagtttaaccccttt 8956071  T
Q  692 tgcaaaacaccaattttaacttggtcaaacctatgtg 728  Q
    ||||||||||||||||| | || ||||||||||||||    
T  8956072 tgcaaaacaccaattttgatttagtcaaacctatgtg 8956108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 2632188 - 2632131
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  2632188 gatttttacctctcataaaactatttacacgtgagtataataggatcgtgtccacagg 2632131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 6173307 - 6173250
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6173307 gatttttacctctcataaaactatttacatgtaagtataataggatcgtgtccacagg 6173250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 616 - 724
Target Start/End: Complemental strand, 47508978 - 47508872
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttgg 715  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||||||||||  |||  ||||  ||| ||||||||||||||  ||||||| ||||||    
T  47508978 taagtttgcaaaagttgcaattttgactcccttttaaaaaaaatggcaaaagtgaccc--catgactagccccttttgcaaaacgtcaattttgacttgg 47508881  T
Q  716 tcaaaccta 724  Q
    |||| ||||    
T  47508880 tcaagccta 47508872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 591 - 695
Target Start/End: Original strand, 46469140 - 46469244
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||||  ||||||||||||| |||||| |||| |  |||| ||||| ||  |||||    
T  46469140 aggcttaaacacactttctaccccttaagtttgcaaaagttgcaattttagccccctattaaaaaaaatggtaaaaatgaccccccatgtctaccccctt 46469239  T
Q  691 ttgca 695  Q
    |||||    
T  46469240 ttgca 46469244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 931 - 986
Target Start/End: Original strand, 31663875 - 31663930
Alignment:
Q  931 gatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  31663875 gatgtaagatttttacatgtcataaaaccatttacacgtaagtataataggatcgt 31663930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 12184660 - 12184594
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||  ||||||||    
T  12184660 tgatgtaagatttttacatctcataaaactatttacacgtgagtatatataggatcgaatccacagg 12184594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 22321170 - 22321228
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22321170 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 22321228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 929 - 991
Target Start/End: Complemental strand, 22825409 - 22825347
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtcca 991  Q
    |||||| | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  22825409 atgatgaaggatttttccatctcataaaactatttacacgtgagtataataggatcgtgtcca 22825347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 31157645 - 31157703
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31157645 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 31157703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 591 - 736
Target Start/End: Original strand, 35959080 - 35959226
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaa-tggcaaaagtcccccctcatgtttagtccct 689  Q
    |||||||||| ||||||   || |||||||||||||| ||||||||||||  ||| |||||||| ||| ||||||||||  | |   |||||||| ||||    
T  35959080 aggcttaaactcacttttcgccccctaagtttgcaaaggttgcaattttggtcccttattaaaaaaaaatggcaaaagtaacactctatgtttagcccct 35959179  T
Q  690 tttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    |||||||||||| |||||| ||||| |||| ||||| ||||| ||||    
T  35959180 tttgcaaaacactaattttgacttgatcaagcctatctgtcacgcca 35959226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 614 - 730
Target Start/End: Complemental strand, 37628585 - 37628473
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaactt 713  Q
    ||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||  ||   ||||||||| | ||||||||||||| ||||||| |  |    
T  37628585 cctaagtttgcaaaagttgtaattttggccccctattaaaa-aaatggcaaaagtgacc---catgtttagcctcttttgcaaaacatcaattttgatct 37628490  T
Q  714 ggtcaaacctatgtgtc 730  Q
    | |||| ||||||||||    
T  37628489 gatcaatcctatgtgtc 37628473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 592 - 666
Target Start/End: Complemental strand, 42338208 - 42338134
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaa 666  Q
    ||||||||| |||||| | || ||||||||||||||||||||||||||| || |||||||||| |||||||||||    
T  42338208 ggcttaaactcactttttgccccctaagtttgcaaaagttgcaattttggcctcctattaaaaaaaatggcaaaa 42338134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 590 - 719
Target Start/End: Original strand, 40659002 - 40659130
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    |||||||||||  ||||| |||| ||||||||| ||||||||||||||||  |||||| |||||| ||||| |||||||   |||||||||||||  |||    
T  40659002 aaggcttaaacgtactttttaccccctaagtttacaaaagttgcaatttttgcccccttttaaaa-aaatgacaaaagtgatccctcatgtttagctcct 40659100  T
Q  690 tttgcaaaacaccaattttaacttggtcaa 719  Q
    |||| ||||   |||||||| | |||||||    
T  40659101 tttgtaaaatttcaattttagcctggtcaa 40659130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 930 - 985
Target Start/End: Complemental strand, 12191642 - 12191586
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtata-ataggatcg 985  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  12191642 tgatgtaagatttttacaactcataaaactatttacacgtgagtatatataggatcg 12191586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 592 - 708
Target Start/End: Complemental strand, 12385545 - 12385430
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    ||||||||| |||||| |||| ||||||||| |||||||||  |||||| |||| |||||||| ||||| |||||||  ||||| |||||||  ||||||    
T  12385545 ggcttaaacgcactttttaccccctaagtttacaaaagttgacattttggcccc-tattaaaaaaaatgacaaaagtgacccctaatgtttacccccttt 12385447  T
Q  692 tgcaaaacaccaatttt 708  Q
    | |||||  ||||||||    
T  12385446 tacaaaattccaatttt 12385430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 583 - 646
Target Start/End: Original strand, 40319542 - 40319605
Alignment:
Q  583 tatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccc 646  Q
    |||||||||||||||||| |||||| ||||  |||| ||||||||||||||||||||| |||||    
T  40319542 tatttttaaggcttaaacgcactttttaccctctaactttgcaaaagttgcaattttggccccc 40319605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 944 - 986
Target Start/End: Original strand, 2796939 - 2796981
Alignment:
Q  944 tacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  2796939 tacatgtcataaaactatttacacgtaagtataataggatcgt 2796981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 588 - 682
Target Start/End: Original strand, 12384089 - 12384183
Alignment:
Q  588 ttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgttt 682  Q
    ||||||||||||| |||| | |||| ||||||||||||||||| | |||||||  | |||||||||| ||||||||||| |   |||||||||||    
T  12384089 ttaaggcttaaacgcactatttaccccctaagtttgcaaaagtagtaattttggtctcctattaaaaaaaatggcaaaaattatccctcatgttt 12384183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 638 - 736
Target Start/End: Original strand, 40320459 - 40320555
Alignment:
Q  638 ttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    ||||||||||||||||| |||||| ||||||  |||| ||| ||||| ||||||||||||||| ||||||| ||||||| || | ||||||||| ||||    
T  40320459 ttgaccccctattaaaa-aaatggaaaaagtgacccc-catatttagccccttttgcaaaacatcaattttgacttggttaatcatatgtgtcacgcca 40320555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 591 - 756
Target Start/End: Original strand, 47507759 - 47507922
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||  ||||| |||| | ||| |||| ||||||| ||||||||  ||||| |||||| ||||| |||||||  ||||  |||||||  |||||    
T  47507759 aggcttaaacgtactttttaccccttaaatttgtaaaagttacaattttggtccccttttaaaaaaaatgccaaaagtgacccc--atgtttaccccctt 47507856  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgcca 756  Q
    |||||||||  ||||||| |  | ||||| ||||||||||| ||||| | | ||||||||| ||||    
T  47507857 ttgcaaaacctcaattttgatgtagtcaagcctatgtgtcacgccacatcagttaaaaaatcgcca 47507922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 19195494 - 19195441
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| |||||||||||||||||||||||||| |||||||||||||    
T  19195494 ctaagttttaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagt 19195441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 929 - 980
Target Start/End: Original strand, 3544239 - 3544290
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataatag 980  Q
    |||||||||  ||||||||| ||||||||||||||||| |||||||||||||    
T  3544239 atgatgtaaagtttttacatgtcataaaactatttacaagtaagtataatag 3544290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 592 - 654
Target Start/End: Original strand, 7313071 - 7313133
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaa 654  Q
    ||||||||| || ||| |||| | ||||||||||||||||||||||||| |||||| ||||||    
T  7313071 ggcttaaactcattttttaccccttaagtttgcaaaagttgcaattttggcccccttttaaaa 7313133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 592 - 736
Target Start/End: Complemental strand, 37918579 - 37918439
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    ||||||||| |||||| || ||  ||| ||||||||||||||||||||  ||||||||||||| |||| |||||| |  ||   ||||||||   |||||    
T  37918579 ggcttaaacgcactttttatcttttaaatttgcaaaagttgcaattttagccccctattaaaa-aaatagcaaaaatgacc---catgtttatcaccttt 37918484  T
Q  692 tgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    ||||||||  ||||||| | |||||||| ||||  ||||||||||    
T  37918483 tgcaaaacctcaattttgatttggtcaatcctacatgtcatgcca 37918439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 933 - 986
Target Start/End: Original strand, 4704755 - 4704808
Alignment:
Q  933 tgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    |||||||||||||||| |   ||||||||||||||||||||||||||| |||||    
T  4704755 tgtaagatttttacatgtataaaaactatttacacgtaagtataatagaatcgt 4704808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 742
Target Start/End: Original strand, 12384386 - 12384443
Alignment:
Q  685 tcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaac 742  Q
    |||||||| ||||||  ||||||| |||| ||||||||||||||||||||||| ||||    
T  12384386 tccctttttcaaaacctcaattttgacttagtcaaacctatgtgtcatgccacataac 12384443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 684
Target Start/End: Complemental strand, 41452530 - 41452461
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttag 684  Q
    ||||||||  ||| |||| ||||||| ||||||||||||| |||||||||||||  ||||| ||||||||    
T  41452530 ctaagtttcaaaatgttgtaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttag 41452461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 601 - 753
Target Start/End: Original strand, 1976917 - 1977068
Alignment:
Q  601 acactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaaca 700  Q
    |||||||  ||| ||||| ||||| ||||| || ||||| |||||||||||||| ||||||| |||| ||||    |||||||| |||||||||||||      
T  1976917 acacttttgaccccctaaatttgcgaaagtagcgattttcaccccctattaaaa-aaatggccaaagaccccatctatgtttagccccttttgcaaaatc 1977015  T
Q  701 ccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattg 753  Q
     |||||||||  ||||||| |||| ||| ||  | || ||||||||| |||||    
T  1977016 tcaattttaatctggtcaatcctacgtgacacactacataacttaaagaattg 1977068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 668
Target Start/End: Complemental strand, 11843457 - 11843405
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  11843457 taagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagt 11843405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 591 - 667
Target Start/End: Complemental strand, 40322611 - 40322535
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||||||| || ||| ||||  |||| |||| |||||||||||||||| ||||||||| | | ||||||||||||    
T  40322611 aggcttaaacgcattttttaccctctaactttgtaaaagttgcaattttggccccctattcataaaaatggcaaaag 40322535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 654
Target Start/End: Complemental strand, 42951557 - 42951494
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaa 654  Q
    |||||||||||||||||   || ||||| ||||||  |||||| ||||||||||||||||||||    
T  42951557 aggcttaaacacacttttggccccctaactttgcaccagttgcgattttgaccccctattaaaa 42951494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 668
Target Start/End: Complemental strand, 13578066 - 13578012
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||  ||| ||||| |||||||||| ||||||||| |||||||||||||    
T  13578066 cctaagtttcaaaatgttgcgattttgaccctctattaaaaaaaatggcaaaagt 13578012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 940 - 986
Target Start/End: Original strand, 45500083 - 45500129
Alignment:
Q  940 tttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  45500083 tttttacatgtcatagaactatttacacgtgagtataatatgatcgt 45500129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 668
Target Start/End: Complemental strand, 48176244 - 48176190
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  48176244 cctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 48176190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 19919882 - 19919829
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||||||||||||||||| ||| |||||||||    
T  19919882 ctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaaaggcaaaagt 19919829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 20636642 - 20636695
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  20636642 ctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 20636695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 20638514 - 20638567
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  20638514 ctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 20638567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 930 - 983
Target Start/End: Complemental strand, 24483543 - 24483491
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggat 983  Q
    |||||||||||||| |||| |||||||  ||||||||||||||||||| |||||    
T  24483543 tgatgtaagatttt-acatgtcataaagttatttacacgtaagtataacaggat 24483491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 24597796 - 24597743
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  24597796 ctaagttttaaaatgttgcgattttgtccccctattaaaaaaaatggcaaaagt 24597743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 46470471 - 46470418
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||||||||| |||||||   |||||||||||| |||| ||||||||    
T  46470471 ctaagtttgcaaaagttacaatttttgtcccctattaaaaaaaatagcaaaagt 46470418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 5e-31; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 588 - 708
Target Start/End: Complemental strand, 42877143 - 42877022
Alignment:
Q  588 ttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctatt-aaaacaaatggcaaaagtcccccctcatgtttagtc 686  Q
    |||||||| |||| |||||| | |||| ||||||||||||||||| ||||||||||||||||| |||| |||||||||||||  ||||||||||||||||    
T  42877143 ttaaggctaaaacgcactttttgcctcttaagtttgcaaaagttgtaattttgaccccctattaaaaaaaaatggcaaaagtaacccctcatgtttagtc 42877044  T
Q  687 ccttttgcaaaacaccaatttt 708  Q
    |||| ||||||||| |||||||    
T  42877043 ccttctgcaaaacatcaatttt 42877022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 592 - 750
Target Start/End: Complemental strand, 5015184 - 5015027
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttt 691  Q
    ||||||||| |||||| || | | |||||||| |||||||||||||||| |||| |||||||| |||||||||||||  ||| |||||||||||  ||||    
T  5015184 ggcttaaactcactttttaacccttaagtttgtaaaagttgcaattttggcccc-tattaaaaaaaatggcaaaagtggcccttcatgtttagtttcttt 5015086  T
Q  692 tgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaa 750  Q
    ||||||||  ||||||| || ||||||| | || |||||||||||| | ||||||||||    
T  5015085 tgcaaaacctcaattttgacctggtcaaccataggtgtcatgccacatcacttaaaaaa 5015027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 591 - 737
Target Start/End: Original strand, 2023331 - 2023474
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| |||| | |||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||  |||  ||| | ||  |||||    
T  2023331 aggcttaaacccactatttaccccctaagtttacaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaccc--catatcta-cccctt 2023427  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    |||||||||  |||||||||||||||||| | |||||| ||||||||    
T  2023428 ttgcaaaacgtcaattttaacttggtcaaccatatgtggcatgccac 2023474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 591 - 737
Target Start/End: Original strand, 5014017 - 5014163
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||||  ||||| ||||   ||||||||||||||||| |||||||  | |||||||||| |||||||||||||  |||||||||||||| |||||    
T  5014017 aggcttaaacctactttttaccctttaagtttgcaaaagttgtaattttggtctcctattaaaaaaaatggcaaaagtgacccctcatgtttagcccctt 5014116  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    |||||||||  ||||||| || |||||||   || ||||||||||||    
T  5014117 ttgcaaaacctcaattttgacctggtcaacgttacgtgtcatgccac 5014163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 590 - 708
Target Start/End: Complemental strand, 12950117 - 12949999
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    |||||| |||| |||||| | || |||||||||||||||||||||||| ||  |||||||||||| |||||||||||||  |||||||||||||| ||||    
T  12950117 aaggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattatggtcccctattaaaaaaaatggcaaaagtgacccctcatgtttagcccct 12950018  T
Q  690 tttgcaaaacaccaatttt 708  Q
    | ||||||||  |||||||    
T  12950017 tctgcaaaacctcaatttt 12949999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 590 - 668
Target Start/End: Original strand, 38107138 - 38107216
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||  |||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  38107138 aaggcttaaatccactttttacctcctaagtttgcaaaaattgcaattttgaccccctattaaaaaaaatggcaaaagt 38107216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 16903971 - 16904036
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16903971 tgatgaaagatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 16904036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 590 - 751
Target Start/End: Original strand, 29993321 - 29993481
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||| ||||||  |||  |||||||||||||||||| ||||||| | ||||||||||| |||||||||||||  |||| ||||||||  || |    
T  29993321 aaggcttaaacgcacttttaaccctctaagtttgcaaaagttgtaattttggcaccctattaaaa-aaatggcaaaagtgaccccccatgtttatcccat 29993419  T
Q  690 tttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaat 751  Q
    ||||||||||  ||||||| |||| ||||||  ||||||||| ||||| | | |||||||||    
T  29993420 tttgcaaaacctcaattttgacttagtcaaatttatgtgtcacgccacatcagttaaaaaat 29993481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 591 - 737
Target Start/End: Complemental strand, 2024354 - 2024209
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| |   |||| |||| ||  |||||    
T  2024354 aggcttaaacccactttttaccccctaagtttgcaaaagttgcaattttgttcccctattaaaa-aaatggcaaaaatgatcccttatgtctaccccctt 2024256  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    |||||||||  ||||||| |||  ||||| | |||||| ||||||||    
T  2024255 ttgcaaaacgtcaattttgactcagtcaaccgtatgtggcatgccac 2024209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 9405216 - 9405159
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9405216 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 9405159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 11722646 - 11722703
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11722646 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 11722703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 27166460 - 27166525
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  27166460 tgatgtaagatttttacatctcataaaactatttacacgtcagtataataggatcgtttccgcagg 27166525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 30606446 - 30606503
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30606446 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 30606503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 34457087 - 34457030
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34457087 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 34457030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 939 - 995
Target Start/End: Complemental strand, 14345251 - 14345195
Alignment:
Q  939 atttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14345251 atttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 14345195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 938 - 993
Target Start/End: Complemental strand, 33435394 - 33435339
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccaca 993  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33435394 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 33435339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 616 - 737
Target Start/End: Complemental strand, 183221 - 183102
Alignment:
Q  616 taagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttgg 715  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||  ||||| ||  ||||||||||||||  ||||||| |||  |    
T  183221 taagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaccc--catgtctacccccttttgcaaaacgtcaattttgactcag 183124  T
Q  716 tcaaacctatgtgtcatgccac 737  Q
    |||| |||||||| || |||||    
T  183123 tcaatcctatgtggcacgccac 183102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 589 - 667
Target Start/End: Original strand, 4533130 - 4533207
Alignment:
Q  589 taaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||||||||| |||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  4533130 taaggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttg-gcccctattaaaaaaaatggcaaaag 4533207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 592 - 761
Target Start/End: Complemental strand, 28223721 - 28223553
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt-cccccctcatgtttagtccctt 690  Q
    ||||||||| |||||| || |  |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||  ||| | ||| ||||| ||| |    
T  28223721 ggcttaaactcactttttatcctctaactttgcaaaagttgcaattttggccccctattaaaa-aaatggcaaaagtgaccctcccatatttag-cccat 28223624  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaactgt 761  Q
    ||| |||| | |||||||  | ||||||| |||| |||||| ||||| ||||||||||| |||||| ||||    
T  28223623 ttgtaaaagatcaattttggcctggtcaatcctaggtgtcacgccacataacttaaaaagttgccagctgt 28223553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 929 - 991
Target Start/End: Complemental strand, 31846747 - 31846685
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtcca 991  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31846747 atgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtcca 31846685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 7315996 - 7315939
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7315996 gatttttccctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 7315939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 595 - 756
Target Start/End: Original strand, 9070677 - 9070836
Alignment:
Q  595 ttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgc 694  Q
    |||||| |||||| ||||  |||| ||||||||||||| ||||||| |||| |||||||| ||||||||||| |  |||| ||| ||||  |||||||||    
T  9070677 ttaaacgcactttttaccctctaattttgcaaaagttgtaattttggcccc-tattaaaaaaaatggcaaaaatgaccccccatatttaa-cccttttgc 9070774  T
Q  695 aaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgcca 756  Q
    |||| | ||||||| || || |||| |||| |||||| ||||| ||||||||||| ||||||    
T  9070775 aaaagatcaattttgacctgatcaatcctaggtgtcacgccacataacttaaaaagttgcca 9070836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 938 - 991
Target Start/End: Complemental strand, 24836514 - 24836461
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtcca 991  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24836514 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtcca 24836461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 591 - 719
Target Start/End: Original strand, 12948880 - 12949008
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||| | |||||| || | | ||||||| |||| |||||||||||| ||||||||||||| |||||| ||||||  ||||| |||||||  |||||    
T  12948880 aggcttaagcgcactttttatcccttaagtttacaaaggttgcaattttggccccctattaaaaaaaatggtaaaagtgaccccttatgtttatcccctt 12948979  T
Q  691 ttgcaaaacaccaattttaacttggtcaa 719  Q
    |||||||||  ||||||| ||| ||||||    
T  12948980 ttgcaaaacctcaattttgactcggtcaa 12949008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 614 - 708
Target Start/End: Complemental strand, 12935936 - 12935841
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaa-tggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaatttt 708  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||| ||||||||||  |||||||||||||| ||||| ||||||||  |||||||    
T  12935936 cctaagtttgcaaaagttgcaattatggtcccctattaaaaaaaaatggcaaaagtgacccctcatgtttagccccttctgcaaaacctcaatttt 12935841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 930 - 984
Target Start/End: Complemental strand, 6270690 - 6270636
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatc 984  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  6270690 tgatgtaagatttttacatgtcataaaactatttacacgtgagtataataggatc 6270636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 11767547 - 11767489
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11767547 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 11767489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 591 - 668
Target Start/End: Complemental strand, 16799975 - 16799899
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||| |||||| |  | | ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16799975 aggcttaaacccactttttgtcccttaagtttgcaaaagttgcaattttgaccccctattaaaa-aaatggcaaaagt 16799899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 585 - 698
Target Start/End: Original strand, 29352483 - 29352596
Alignment:
Q  585 tttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttag 684  Q
    ||||| |||||||||| ||||||  |||  |||| ||||||||||| ||||||||| ||||||||||||| ||||||||||| |  |||| ||| ||||     
T  29352483 ttttttaggcttaaacccacttttcaccctctaaatttgcaaaagtagcaattttggccccctattaaaaaaaatggcaaaaatgaccccccatatttac 29352582  T
Q  685 tcccttttgcaaaa 698  Q
     |||||||||||||    
T  29352583 ccccttttgcaaaa 29352596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 591 - 719
Target Start/End: Original strand, 12934716 - 12934844
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||| | |||||| || | | ||||||| |||| ||||||||||||  |||||||||||| |||||| ||||||  ||||| |||||||  |||||    
T  12934716 aggcttaagcgcactttttatcccttaagtttacaaaggttgcaattttggtcccctattaaaaaaaatggtaaaagtgaccccttatgtttatcccctt 12934815  T
Q  691 ttgcaaaacaccaattttaacttggtcaa 719  Q
    |||||||||  ||||||| ||| ||||||    
T  12934816 ttgcaaaacctcaattttgactcggtcaa 12934844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 933 - 986
Target Start/End: Original strand, 34869109 - 34869162
Alignment:
Q  933 tgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||||||||||    
T  34869109 tgtaagatttttacatgtcataaaactatttacatgtgagtataataggatcgt 34869162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 625 - 737
Target Start/End: Original strand, 16793564 - 16793676
Alignment:
Q  625 aaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaaccta 724  Q
    |||||||||||||||| || |||||||||| |||||||||||||  | |||||||| ||  ||||||||||||| | ||||||| |||  ||||| | ||    
T  16793564 aaaagttgcaattttggcctcctattaaaaaaaatggcaaaagtaactcctcatgtctacccccttttgcaaaagatcaattttgactcagtcaaccata 16793663  T
Q  725 tgtgtcatgccac 737  Q
    |||| || |||||    
T  16793664 tgtggcacgccac 16793676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 930 - 986
Target Start/End: Complemental strand, 42801105 - 42801049
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgt 986  Q
    ||||||| ||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  42801105 tgatgtaggatttttacatgtcataaaactatttacacgtgactataataggatcgt 42801049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 586 - 667
Target Start/End: Complemental strand, 4534126 - 4534044
Alignment:
Q  586 ttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctatt-aaaacaaatggcaaaag 667  Q
    |||| |||||||||  |||||| |||| ||||||||||||||||||||||||||| |||  |||| |||| ||||||||||||    
T  4534126 tttttaggcttaaattcactttttaccccctaagtttgcaaaagttgcaattttggccctttattaaaaaaaaatggcaaaag 4534044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 590 - 668
Target Start/End: Complemental strand, 29353668 - 29353590
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||||  |||||  |||  |||||||||||||||| |||||||||  |||||||||||| |||||||||||||    
T  29353668 aaggcttaaacctacttttcaccctctaagtttgcaaaagtagcaattttggtcccctattaaaaaaaatggcaaaagt 29353590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 624 - 761
Target Start/End: Original strand, 42876172 - 42876308
Alignment:
Q  624 caaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacct 723  Q
    ||||||||| ||||||  |||||| |||||| |||| | ||||||  |||   |||||||| ||||||||||||||  ||||||| ||   || || |||    
T  42876172 caaaagttgtaattttagcccccttttaaaaaaaatag-aaaagtgaccctctatgtttagccccttttgcaaaacctcaattttgaccaagttaatcct 42876270  T
Q  724 atgtgtcatgccacttaacttaaaaaattgccaactgt 761  Q
    |||||||||||||| ||| ||||||| |||||||||||    
T  42876271 atgtgtcatgccacctaatttaaaaatttgccaactgt 42876308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 686 - 736
Target Start/End: Complemental strand, 9071946 - 9071896
Alignment:
Q  686 cccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgcca 736  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||| ||||    
T  9071946 cccttttgcaaaacaccaattttgacttggtcaatcatatgtgtcacgcca 9071896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 590 - 668
Target Start/End: Original strand, 20869088 - 20869166
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||| | || |  ||| ||||||||||||||||| || |||||| |||||| |||||| |||||||||||||    
T  20869088 aaggcttaaacgcgctattgaccacctaagtttgcaaaagtagcgattttggcccccttttaaaaaaaatggcaaaagt 20869166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 614 - 668
Target Start/End: Complemental strand, 29994324 - 29994271
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||| ||||||    
T  29994324 cctaagtttgcaaaagttgtaattttgaccccc-attaaaaaaaatggtaaaagt 29994271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 18695027 - 18695080
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  18695027 ctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagt 18695080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 592 - 708
Target Start/End: Complemental strand, 38108138 - 38108021
Alignment:
Q  592 ggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctatt-aaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||||||| |||||| |||| ||||||||||||| || || ||||||| ||| ||||| |||| ||||||||||| |  ||||| |||| ||  | |||    
T  38108138 ggcttaaacccactttttaccccctaagtttgcaacagctgtaattttggccctctattaaaaaaaaatggcaaaaatgaccccttatgtctaccctctt 38108039  T
Q  691 ttgcaaaacaccaatttt 708  Q
    |||||||||  |||||||    
T  38108038 ttgcaaaacgtcaatttt 38108021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 666
Target Start/End: Original strand, 2375741 - 2375791
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaa 666  Q
    |||||||||||||||| ||||||||||||| || |||||| |||||||||||    
T  2375741 ctaagtttgcaaaagtagcaattttgaccctcttttaaaa-aaatggcaaaa 2375791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 646
Target Start/End: Complemental strand, 9072330 - 9072275
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccc 646  Q
    |||||||||| |||||  ||||  |||| |||||||||||||||||||||||||||    
T  9072330 aggcttaaacgcacttcttaccctctaactttgcaaaagttgcaattttgaccccc 9072275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 668
Target Start/End: Complemental strand, 25557156 - 25557103
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    |||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  25557156 cctaagtttcaaaatgttgcgattttgaccccctattaaaa-aaatggcaaaagt 25557103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 629 - 666
Target Start/End: Original strand, 8645834 - 8645871
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaa 666  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  8645834 gttgcgattttgaccccctattaaaaaaaatggcaaaa 8645871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 611 - 664
Target Start/End: Original strand, 16901016 - 16901069
Alignment:
Q  611 cctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaa 664  Q
    ||||||| ||||  ||| ||||| |||||||||||||||||||| |||||||||    
T  16901016 cctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaa 16901069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 591 - 733
Target Start/End: Complemental strand, 81066 - 80926
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    |||||||||| |||| |  ||| ||||||||||||||||| || ||||||||||||| || ||| ||||||||||| |  ||||  |||||||  |||||    
T  81066 aggcttaaacgcactattcaccccctaagtttgcaaaagtagcgattttgaccccctttttaaaaaaatggcaaaattgacccc--atgtttaccccctt 80969  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatg 733  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  80968 ttgcaaaacaccaattttgacttggtcaatcctatgtgtcatg 80926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 593 - 733
Target Start/End: Original strand, 79834 - 79972
Alignment:
Q  593 gcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctttt 692  Q
    |||||||| |||| | |||| | ||||||||||||||| || |||||| |||||| |||||| |||||||||||||  | || ||| ||||  |||||||    
T  79834 gcttaaacgcactatttaccccttaagtttgcaaaagtagcgattttggccccct-ttaaaaaaaatggcaaaagtgactcc-catatttaccccctttt 79931  T
Q  693 gcaaaacaccaattttaacttggtcaaacctatgtgtcatg 733  Q
     ||||||| ||||||| |||  ||||| |||||||||||||    
T  79932 acaaaacatcaattttgactgagtcaatcctatgtgtcatg 79972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 62; Significance: 3e-26; HSPs: 3)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 591 - 708
Target Start/End: Original strand, 9561 - 9678
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||| |||| |||||| | || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||||||||| |||||    
T  9561 aggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaaccctcatgtttagcccctt 9660  T
Q  691 ttgcaaaacaccaatttt 708  Q
     ||||||||  |||||||    
T  9661 ctgcaaaacctcaatttt 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 591 - 708
Target Start/End: Original strand, 14935 - 15052
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||| |||| |||||| | || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||||||||| |||||    
T  14935 aggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaaccctcatgtttagcccctt 15034  T
Q  691 ttgcaaaacaccaatttt 708  Q
     ||||||||  |||||||    
T  15035 ctgcaaaacctcaatttt 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 590 - 719
Target Start/End: Complemental strand, 16165 - 16036
Alignment:
Q  590 aaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccct 689  Q
    ||||||||||| |||||| |||| | ||||||| |||| |||||||||||| ||||| ||||||| |||||||||||||  | ||| |||||||  ||||    
T  16165 aaggcttaaacgcactttttaccccttaagtttacaaaggttgcaattttggcccccaattaaaaaaaatggcaaaagtgacaccttatgtttatcccct 16066  T
Q  690 tttgcaaaacaccaattttaacttggtcaa 719  Q
    ||||||||||  ||||||| ||| ||||||    
T  16065 tttgcaaaacctcaattttgactcggtcaa 16036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 930 - 993
Target Start/End: Original strand, 75667 - 75730
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccaca 993  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  75667 tgatgtaagatttttacatgtcataaaactatttacacgtgagtataataggatcgtgtccaca 75730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 929 - 995
Target Start/End: Original strand, 28260 - 28326
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28260 atgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 28326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 591 - 737
Target Start/End: Original strand, 268410 - 268555
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtccctt 690  Q
    ||||| |||| |||||| |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||   |||  |||| ||  |||||    
T  268410 aggctaaaacgcactttttacctcttaagtttgcaaaagttgcaattttggccccctattaaaa-aaatggcaaaagtgatcccctatgtctaccccctt 268508  T
Q  691 ttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccac 737  Q
    |||||||||  ||||||| |||  ||||| |||||||| || |||||    
T  268509 ttgcaaaacgtcaattttgactcagtcaaccctatgtggcacgccac 268555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 615 - 724
Target Start/End: Complemental strand, 3322 - 3213
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaattttaacttg 714  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||  | || ||||||||  |||||||||||||   ||||||| |||||    
T  3322 ctaagtttgcaaaagttgcaattttgaccccctattaaagaaaatggcaaaagtgacaccccatgtttatccccttttgcaaaatgtcaattttgacttg 3223  T
Q  715 gtcaaaccta 724  Q
     |||| ||||    
T  3222 atcaagccta 3213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 758
Target Start/End: Original strand, 2440 - 2525
Alignment:
Q  673 cctcatgtttagtcccttttgcaaaacaccaattttaacttggtcaaacctatgtgtcatgccacttaacttaaaaaattgccaac 758  Q
    |||||||||||  || |||||||||||  ||||||| |||| ||||||| ||||||||| ||||| | | ||||||||| ||||||    
T  2440 cctcatgtttacccctttttgcaaaacctcaattttgacttagtcaaacttatgtgtcacgccacatcagttaaaaaatcgccaac 2525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 11574 - 11631
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11574 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 15344 - 15401
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15344 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 15401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 175393 - 175336
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  175393 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 175336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0446 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 591 - 667
Target Start/End: Original strand, 11560 - 11636
Alignment:
Q  591 aggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaag 667  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  11560 aggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttagccccctattaaaaaaaatggcaaaag 11636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 168778 - 168835
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  168778 gatttttacttctcataaaactacttacacgtaagtataataggatcgtgtccacagg 168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 930 - 995
Target Start/End: Original strand, 115930 - 115995
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| |  ||||||||||||||||| |||||||||||||||| ||| ||||    
T  115930 tgatgtaagatttttacatatattaaaactatttacacgtgagtataataggatcgtttccgcagg 115995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 349976 - 350033
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  349976 gatttttacctctcacaaaactatttacacgtaagtataataggatcgtgtccacagg 350033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 49; Significance: 2e-18; HSPs: 3)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 589 - 728
Target Start/End: Complemental strand, 38424 - 38284
Alignment:
Q  589 taaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttgaccccctatt-aaaacaaatggcaaaagtcccccctcatgtttagtcc 687  Q
    ||||||| |||| |||||| | || | |||||||||| |||||||||||||| ||||||||| |||| |||||||||||||  |||  ||||| ||  ||    
T  38424 taaggctaaaacgcactttttgccccttaagtttgcagaagttgcaattttggccccctattaaaaaaaaatggcaaaagtgaccctccatgtctacccc 38325  T
Q  688 cttttgcaaaacaccaattttaacttggtcaaacctatgtg 728  Q
    ||||||||||||  ||||||| |||| ||||||| ||||||    
T  38324 cttttgcaaaacgtcaattttgacttagtcaaacatatgtg 38284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 614 - 708
Target Start/End: Original strand, 24828 - 24921
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaatttt 708  Q
    |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||  |||| ||||| ||  ||||||||||||||  |||||||    
T  24828 cctaagtttgcagaagttgcaattttggccccctattaaaaaaaatggcaaaagtgacccc-catgtctacccccttttgcaaaacgtcaatttt 24921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 614 - 708
Target Start/End: Original strand, 37345 - 37438
Alignment:
Q  614 cctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttagtcccttttgcaaaacaccaatttt 708  Q
    |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||  |||| ||||| ||  ||||||||||||||  |||||||    
T  37345 cctaagtttgcagaagttgcaattttggccccctattaaaaaaaatggcaaaagtgacccc-catgtctacccccttttgcaaaacgtcaatttt 37438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 929 - 995
Target Start/End: Original strand, 25010 - 25077
Alignment:
Q  929 atgatgtaagatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25010 atgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 25077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Original strand, 11856 - 11914
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11856 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 11914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 9535 - 9477
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9535 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 9477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 938 - 995
Target Start/End: Complemental strand, 12987 - 12929
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 995  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12987 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 12929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 938 - 992
Target Start/End: Complemental strand, 7522 - 7469
Alignment:
Q  938 gatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccac 992  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  7522 gatttttacctctcataaaactatttacacgtgagtataataggat-gtgtccac 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 3241 - 3188
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| |||||||||||||||||||||||||| |||||||||||||    
T  3241 ctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagt 3188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1212 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1212
Description:

Target: scaffold1212; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 582 - 640
Target Start/End: Original strand, 2125 - 2183
Alignment:
Q  582 atatttttaaggcttaaacacactttgtacctcctaagtttgcaaaagttgcaattttg 640  Q
    ||||| || ||||| |||| |||||| |||| |||||||||||||||||||||||||||    
T  2125 atattctttaggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttg 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 2020 - 2073
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  2020 ctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagt 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 930 - 995
Target Start/End: Complemental strand, 6316 - 6251
Alignment:
Q  930 tgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 995  Q
    ||||||||||||||||||| ||||| ||||||||||| || ||||||| | |||||| ||| ||||    
T  6316 tgatgtaagatttttacatgtcatataactatttacatgtgagtataacatgatcgtttccgcagg 6251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 668
Target Start/End: Original strand, 19304 - 19360
Alignment:
Q  611 cctcctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||||  ||| ||||| |||||||||||||||||||| |||||||||||||    
T  19304 cctcctaagtttcaaaatgttgcgattttgaccccctattaaaa-aaatggcaaaagt 19360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Original strand, 61837 - 61890
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||||    
T  61837 ctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagt 61890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 668
Target Start/End: Complemental strand, 1023 - 984
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  1023 gttgcaattttgatcccctattaaaaaaaatggcaaaagt 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 684
Target Start/End: Original strand, 5327 - 5381
Alignment:
Q  629 gttgcaattttgaccccctattaaaacaaatggcaaaagtcccccctcatgtttag 684  Q
    |||||||||||| ||||||||||||| |||||||||||||  ||||| ||||||||    
T  5327 gttgcaattttggccccctattaaaa-aaatggcaaaagtgaccccttatgtttag 5381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 668
Target Start/End: Complemental strand, 142227 - 142174
Alignment:
Q  615 ctaagtttgcaaaagttgcaattttgaccccctattaaaacaaatggcaaaagt 668  Q
    ||||||||  ||| ||||||||||||  |||||||||||| |||||||||||||    
T  142227 ctaagttttaaaatgttgcaattttggtcccctattaaaaaaaatggcaaaagt 142174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University