View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17277_low_100 (Length: 308)
Name: NF17277_low_100
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17277_low_100 |
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Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 37 - 299
Target Start/End: Original strand, 42177779 - 42178041
Alignment:
| Q |
37 |
gggaaagcaaagttccacaatacattattgaattagagtaggcaaaagggaataatccaagctagaaagtaaaataactaaaatgttttatttaggttgc |
136 |
Q |
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| T |
42177779 |
gggaaagcaaagttccacaatacattattgaattagagtaggcaaaagggaataatccaagctagaaagtaaaataactaaaatgttttatttaggttac |
42177878 |
T |
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| Q |
137 |
aaagtcggtgtttccttggcggtggtagctttggaatcaaagcaaaatgacaaaggtgatagggagagggaccattgcaaacaagaatagatagcataac |
236 |
Q |
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| T |
42177879 |
aaagtcggtgtttccttggcggtggtagctttggaatcaaagcaaaatgacaaaggtgatagggagagggaccattgcaaacaagaatagatagcataac |
42177978 |
T |
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| Q |
237 |
accgaacacacatgtcccaagcatcccatgccattgtttattgttttggtttatttgttcatc |
299 |
Q |
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| T |
42177979 |
accgaacacacatgtcccaagcatcccatgccattgtttattgttttggtttatttgttcatc |
42178041 |
T |
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