View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17277_low_137 (Length: 248)
Name: NF17277_low_137
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17277_low_137 |
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Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 7056434 - 7056667
Alignment:
| Q |
1 |
tgctttgcaagttcttgttttcgtttttaaggaagaagcgttcggctttgttctatatataagcacaatattgttcctgttatttgttaacacgactttc |
100 |
Q |
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| T |
7056434 |
tgctttgcaagttcttgttttcgtttttaaggaagaagcgttcggctttgttctatatataagcgcaatattgttcctgttatttgttaatacgactttc |
7056533 |
T |
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| Q |
101 |
tacaaagattaatacacataacagaaactaattgacaagtttgtggatatgctcaaatcagttaaacacttccgaatcaaggtttttacaattgcgtttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
7056534 |
tacaaagattaatacacataacagaaactaattgacaagtttgtggatatgctcaaatcagttaaacacttcctaatcaaggtttttacaattgcgtttt |
7056633 |
T |
|
| Q |
201 |
aaatcgttcttaagcaacaaaatgcctatttttt |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
7056634 |
aaatcgttcttaagcaacaaaatgcctatttttt |
7056667 |
T |
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