View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17277_low_138 (Length: 248)
Name: NF17277_low_138
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17277_low_138 |
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Alignment Details
Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21154137 - 21154287
Alignment:
| Q |
1 |
tagttttatattttttgaaggagcagtttttcttgctagtttaaggaagagaagaacagaaaaacatcgaaacgc----acgcacgtgtccaaagtttga |
96 |
Q |
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| T |
21154137 |
tagttttatattttttgaaggagcagtttttcttgctagtttaaggaagagaagaacagaaaaacatcgaaacgcacgcacgcacgagtccaaagtttaa |
21154236 |
T |
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| Q |
97 |
acaaaacataagtacacacactgacacaggtgttgtgtcgtaagtaacatt |
147 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
21154237 |
acaaaacataagtacacacactgacacaggtgttgtgtcctaagtaacatt |
21154287 |
T |
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