View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17277_low_162 (Length: 233)

Name: NF17277_low_162
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17277_low_162
NF17277_low_162
[»] chr6 (7 HSPs)
chr6 (40-233)||(33590644-33590837)
chr6 (101-228)||(20836612-20836734)
chr6 (101-228)||(18271678-18271800)
chr6 (102-167)||(33427651-33427716)
chr6 (102-206)||(12852230-12852334)
chr6 (197-233)||(20836723-20836759)
chr6 (107-167)||(31351123-31351183)
[»] chr4 (15 HSPs)
chr4 (101-228)||(18740096-18740218)
chr4 (114-228)||(43955601-43955715)
chr4 (139-233)||(4621882-4621976)
chr4 (139-233)||(43364196-43364285)
chr4 (101-228)||(23780227-23780349)
chr4 (153-228)||(35786740-35786815)
chr4 (151-228)||(37255038-37255115)
chr4 (101-168)||(44833927-44833994)
chr4 (179-228)||(19747526-19747575)
chr4 (179-228)||(19792231-19792280)
chr4 (101-193)||(14126316-14126408)
chr4 (144-189)||(4485291-4485336)
chr4 (139-208)||(6147437-6147505)
chr4 (139-228)||(32896591-32896680)
chr4 (139-228)||(48141263-48141347)
[»] chr5 (10 HSPs)
chr5 (101-228)||(5131274-5131396)
chr5 (144-228)||(6644810-6644894)
chr5 (169-233)||(39797416-39797480)
chr5 (139-233)||(27514469-27514563)
chr5 (101-224)||(27946872-27946995)
chr5 (107-233)||(16489129-16489255)
chr5 (139-168)||(22920888-22920917)
chr5 (197-233)||(43259839-43259875)
chr5 (192-228)||(43259864-43259900)
chr5 (144-172)||(43399406-43399434)
[»] chr8 (6 HSPs)
chr8 (144-233)||(35699627-35699716)
chr8 (137-218)||(18605220-18605301)
chr8 (144-233)||(30595472-30595556)
chr8 (144-228)||(2259806-2259890)
chr8 (101-194)||(42651385-42651478)
chr8 (197-233)||(26099361-26099397)
[»] chr7 (5 HSPs)
chr7 (101-226)||(23777030-23777155)
chr7 (101-224)||(35912115-35912238)
chr7 (101-226)||(43341030-43341150)
chr7 (101-225)||(20335639-20335763)
chr7 (144-228)||(23803078-23803157)
[»] chr2 (4 HSPs)
chr2 (101-233)||(27081013-27081140)
chr2 (101-205)||(5722764-5722868)
chr2 (139-228)||(36330461-36330550)
chr2 (197-233)||(14108696-14108732)
[»] chr3 (6 HSPs)
chr3 (139-228)||(55216789-55216873)
chr3 (149-228)||(36343772-36343851)
chr3 (101-167)||(54801625-54801686)
chr3 (139-195)||(41264845-41264901)
chr3 (101-164)||(36436051-36436114)
chr3 (112-177)||(37152702-37152767)
[»] chr1 (6 HSPs)
chr1 (101-193)||(22786625-22786717)
chr1 (151-233)||(32567130-32567208)
chr1 (137-170)||(15661613-15661646)
chr1 (147-195)||(5993597-5993645)
chr1 (192-228)||(45376452-45376488)
chr1 (201-233)||(47756373-47756405)
[»] scaffold0086 (1 HSPs)
scaffold0086 (144-220)||(20641-20722)
[»] scaffold0024 (1 HSPs)
scaffold0024 (192-233)||(60110-60151)


Alignment Details
Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 40 - 233
Target Start/End: Original strand, 33590644 - 33590837
Alignment:
Q  40 caatgcattcctttattgaacatgcctttttaaattcaccctttctattttccgtactagaggttcagtttggaatgaaaactgaaccgaatcaagataa 139  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  33590644 caatgtattcctttattgaacatgcctttttcaattcaccatttctatcttccgtactagaggttcggtttggaataaaaactgaaccgaaccaagataa 33590743  T
Q  140 actatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgttattat 233  Q
    ||||||| | ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  33590744 actattttccaaatttaaaataactgaaccgaaccgaactgtttgcatttcgaacttaactgaactgttccaaaccgaactgaattgctattat 33590837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 20836612 - 20836734
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    ||||||||| || |||||||||||||||||   |  |||||| |||||||||| |||||||||||||| |||      ||||||||||||||||| |||     
T  20836612 ggttcagttcgggatgaaaactgaaccgaactgaactaaactgtttgctaaatctaaaataactgaactgaac-----tgtttgcatttcgaactgaacg 20836706  T
Q  201 gaactgttccaaaccgaactgaactgtt 228  Q
    |||||||| |||||||||||||||||||    
T  20836707 gaactgtttcaaaccgaactgaactgtt 20836734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 18271678 - 18271800
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    |||||||||  | |||||||||||||||||   |  | |||| | ||||||||||||||||||||||| |||      |||||||||||| |||  ||||    
T  18271678 ggttcagttctggatgaaaactgaaccgaactgaactgaactgtgtgctaaatttaaaataactgaactgaac-----tgtttgcatttcaaaccaaact 18271772  T
Q  201 gaactgttccaaaccgaactgaactgtt 228  Q
    |||||||| |||||||||||||||||||    
T  18271773 gaactgtttcaaaccgaactgaactgtt 18271800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 33427651 - 33427716
Alignment:
Q  102 gttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaa 167  Q
    |||||||| ||||||||||||||||||||  ||  | || |||||| |||||||||||||||||||    
T  33427651 gttcagttcggaatgaaaactgaaccgaactaaactgaattatttgttaaatttaaaataactgaa 33427716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 12852334 - 12852230
Alignment:
Q  102 gttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactg 201  Q
    |||| |||||| ||||||||||||||||| | |  |||| | |||| ||||||||||| |||| |||  |||||||  ||||| |||| |||||||| ||    
T  12852334 gttcggtttgggatgaaaactgaaccgaaccgatctaaattgtttgttaaatttaaaacaactaaactaaatcgaaccgtttgtattttgaacttaattg 12852235  T
Q  202 aactg 206  Q
    |||||    
T  12852234 aactg 12852230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 20836723 - 20836759
Alignment:
Q  197 aactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  20836723 aactgaactgttccaaactgaattgaactgttattat 20836759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 31351183 - 31351123
Alignment:
Q  107 gtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaa 167  Q
    |||||| ||||||| ||||  ||||| |  ||||||||||| |||||||||||||||||||    
T  31351183 gtttgggatgaaaattgaattgaatccaactaaactatttgataaatttaaaataactgaa 31351123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 18740218 - 18740096
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    |||||| ||||| || |||||||||||||||||| || ||||||||||||||||||||||||  |||| ||||     ||||||||||||||||| ||||    
T  18740218 ggttcaatttgggataaaaactgaaccgaatcaaaatgaactatttgctaaatttaaaataatagaactgaat-----tgtttgcatttcgaactgaact 18740124  T
Q  201 gaactgttccaaaccgaactgaactgtt 228  Q
    ||| |||| |||||||||||||||||||    
T  18740123 gaattgtttcaaaccgaactgaactgtt 18740096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 43955715 - 43955601
Alignment:
Q  114 atgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaa 213  Q
    ||||||||||||||||| | |  ||||||| ||| ||||||||||||||||||||  ||||||| ||||||||||||||||| ||| |||||||||||||    
T  43955715 atgaaaactgaaccgaaccgaattaaactacttgttaaatttaaaataactgaacttaatcgaactgtttgcatttcgaactgaacagaactgttccaaa 43955616  T
Q  214 ccgaactgaactgtt 228  Q
    |||||  ||||||||    
T  43955615 ccgaaacgaactgtt 43955601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 4621882 - 4621976
Alignment:
Q  139 aactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||| |||| ||||||||| ||||||| ||| || | |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  4621882 aactgtttgataaatttaatataactggaccaaaccaaattgtttgcatttcgaactgaactgaactgtttcaaaccgaattgaactgttattat 4621976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 43364285 - 43364196
Alignment:
Q  139 aactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||| ||||||||||||||||||||||||| |||      |||||||||||||||   ||||||||||||  |||||||||||||||||||||||    
T  43364285 aactgtttgctaaatttaaaataactgaactgaac-----tgtttgcatttcgaatcgaactgaactgttttaaaccgaactgaactgttattat 43364196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 23780227 - 23780349
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    ||||||||| || ||||||||||||||||||  |  | || | |||||||||| |||||||| ||||| |||      |||||| |||||||||| ||||    
T  23780227 ggttcagttcgggatgaaaactgaaccgaattgaacttaattgtttgctaaatctaaaataattgaactgaac-----tgtttgtatttcgaactgaact 23780321  T
Q  201 gaactgttccaaaccgaactgaactgtt 228  Q
    |||||||| |||||| ||||||||||||    
T  23780322 gaactgtttcaaaccaaactgaactgtt 23780349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 35786740 - 35786815
Alignment:
Q  153 tttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    |||||||||  ||||| |||||||||| ||| ||||||||||| ||| ||||||||||||||| |||| |||||||    
T  35786740 tttaaaatatttgaactgaatcgaattatttacatttcgaactgaaccgaactgttccaaaccaaactaaactgtt 35786815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 37255115 - 37255038
Alignment:
Q  151 aatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||   || |||| ||||| |||| ||||||||    
T  37255115 aatttaaaataactgaactgaaccgaattgtttgcatttcgaactgaatcaaaatgtttcaaactgaaccgaactgtt 37255038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 44833927 - 44833994
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaac 168  Q
    ||||| ||| || ||||||| |||||||||||||  | |||| |||||||||||||||||||||||||    
T  44833927 ggttcggttcgggatgaaaattgaaccgaatcaaattgaactgtttgctaaatttaaaataactgaac 44833994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 19747575 - 19747526
Alignment:
Q  179 tgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    ||||||||||| ||| |||||||||||||| ||||| |||||||||||||    
T  19747575 tgtttgcatttggaatttaactgaactgtttcaaactgaactgaactgtt 19747526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 19792231 - 19792280
Alignment:
Q  179 tgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    ||||||||||| ||| |||||||||||||| ||||| |||||||||||||    
T  19792231 tgtttgcatttggaatttaactgaactgtttcaaactgaactgaactgtt 19792280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 14126316 - 14126408
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaa 193  Q
    |||||||||||  |||||||||||| |||| | |  | |||| |||||||||||||||| ||||||||| ||  ||| |||||| ||||||||    
T  14126316 ggttcagtttgagatgaaaactgaatcgaaccgaactcaactgtttgctaaatttaaaaaaactgaaccaaactgaactgtttgtatttcgaa 14126408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 4485291 - 4485336
Alignment:
Q  144 tttgctaaatttaaaataactgaaccgaatcgaattgtttgcattt 189  Q
    ||||||| ||||||||||||||||  |||||||| |||||||||||    
T  4485291 tttgctagatttaaaataactgaaatgaatcgaactgtttgcattt 4485336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 6147505 - 6147437
Alignment:
Q  139 aactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgtt 208  Q
    ||||||||| |||||||||| |||||||||| || |||| | ||||||||| ||||| ||| ||||||||    
T  6147505 aactatttgataaatttaaa-taactgaaccaaaccgaactatttgcattttgaactgaaccgaactgtt 6147437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 32896680 - 32896591
Alignment:
Q  139 aactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    |||| |||||||||||||| ||||||||   ||| |||| ||||||||||| ||||| ||| ||| ||||  ||||||||| ||| ||||    
T  32896680 aactgtttgctaaatttaagataactgagttgaaccgaactgtttgcattttgaactgaaccgaattgttttaaaccgaaccgaattgtt 32896591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 48141347 - 48141263
Alignment:
Q  139 aactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    |||| |||||||||||||||||||||||||      ||||||||||||||| || || ||||  | |||| |||||||||||||| ||||    
T  48141347 aactgtttgctaaatttaaaataactgaac-----tgaattgtttgcattttgatctaaactatattgtttcaaaccgaactgaattgtt 48141263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 5131396 - 5131274
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    |||||||||||| |||||||||||||||||   |  ||||||||||||||||||||||||||  |||| |||      ||||| ||||||||||| ||||    
T  5131396 ggttcagtttgggatgaaaactgaaccgaactgaactaaactatttgctaaatttaaaataatagaactgaac-----tgtttacatttcgaactgaact 5131302  T
Q  201 gaactgttccaaaccgaactgaactgtt 228  Q
    |||||||| |||||||||||||||||||    
T  5131301 gaactgtttcaaaccgaactgaactgtt 5131274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 6644894 - 6644810
Alignment:
Q  144 tttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    ||||||||||||||||||||||||  ||| |||| | ||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  6644894 tttgctaaatttaaaataactgaattgaaccgaactatttgcatttcgaactgaactgaactgtttcaaaccgaattgaactgtt 6644810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 39797480 - 39797416
Alignment:
Q  169 cgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgttattat 233  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  39797480 cgaatcgaactgtttgcatttcgaacttgactgaactgtttcaaaccgaaccgaactgttattat 39797416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 27514563 - 27514469
Alignment:
Q  139 aactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||| |||| ||||||| |||||| ||||| |||   |||||||||||||||||||| ||||||| |||| |||||||||| |||||||||||||    
T  27514563 aactgtttgttaaattttaaataattgaactgaactaaattgtttgcatttcgaactgaactgaattgtttcaaaccgaaccgaactgttattat 27514469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 27946872 - 27946995
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    |||||||||||| ||||||| || ||||||||||  | || | |||| |||||||||||||||| ||| |||  |||||||||| |||||||||| | ||    
T  27946872 ggttcagtttgggatgaaaaatgtaccgaatcaaactgaattgtttgttaaatttaaaataactaaactgaactgaattgtttgtatttcgaactgagct 27946971  T
Q  201 gaactgttccaaaccgaactgaac 224  Q
    ||| ||||  ||| ||||||||||    
T  27946972 gaattgttttaaatcgaactgaac 27946995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 16489129 - 16489255
Alignment:
Q  107 gtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactg 206  Q
    |||||| ||||||||||||||||| | |  | || |||||  |||||||||||||| ||||| ||||| ||  ||||| ||||  |||| ||| ||||||    
T  16489129 gtttgggatgaaaactgaaccgaaccgaactgaattatttattaaatttaaaataattgaactgaatcaaacggtttgtattttaaactgaaccgaactg 16489228  T
Q  207 ttccaaaccgaactgaactgttattat 233  Q
    |||||||  ||||  ||||||||||||    
T  16489229 ttccaaatggaaccaaactgttattat 16489255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 22920888 - 22920917
Alignment:
Q  139 aactatttgctaaatttaaaataactgaac 168  Q
    ||||||||||||||||||||||||||||||    
T  22920888 aactatttgctaaatttaaaataactgaac 22920917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 43259875 - 43259839
Alignment:
Q  197 aactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  43259875 aactgaactgttccgaactgaactgaactgttattat 43259839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 43259900 - 43259864
Alignment:
Q  192 aacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    |||| |||||||||||| |||||||||||||||||||    
T  43259900 aactgaactgaactgtttcaaaccgaactgaactgtt 43259864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 43399406 - 43399434
Alignment:
Q  144 tttgctaaatttaaaataactgaaccgaa 172  Q
    |||||||||||||||||||||||||||||    
T  43399406 tttgctaaatttaaaataactgaaccgaa 43399434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 35699716 - 35699627
Alignment:
Q  144 tttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||| |||||||||||||| ||||| | || ||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||    
T  35699716 tttgataaatttaaaataattgaactggattgaattgtttgcatttcgaactgaaccgaactgttgcaaactgaactgaactgttattat 35699627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 18605220 - 18605301
Alignment:
Q  137 taaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaa 218  Q
    |||||| ||||||||||||||||||| | ||| ||| |||| ||||||||||||||||| |||||||||||| |||||||||    
T  18605220 taaactctttgctaaatttaaaataattaaactgaaccgaactgtttgcatttcgaactgaactgaactgtttcaaaccgaa 18605301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 30595472 - 30595556
Alignment:
Q  144 tttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||||||||||||||||||| |||| ||||     ||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||    
T  30595472 tttgctaaatttaaaataaccgaactgaat-----tgtttgcatttcgaattgaactgaactattccgaactgaactgaactgttattat 30595556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 2259806 - 2259890
Alignment:
Q  144 tttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    |||| |||||||||||||| |||||||||||||| |||||||||||  || | ||| ||||||||  ||||||| ||||||||||    
T  2259806 tttgttaaatttaaaataattgaaccgaatcgaactgtttgcattttaaattgaaccgaactgttttaaaccgatctgaactgtt 2259890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 42651478 - 42651385
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaac 194  Q
    ||||| |||||| || |||| ||||||||| |||  ||| || |||||||| |||||||||||| |||||||  ||| | ||||||||||||||    
T  42651478 ggttcggtttgggatcaaaattgaaccgaaccaaattaatctgtttgctaattttaaaataactaaaccgaactgaactatttgcatttcgaac 42651385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 26099361 - 26099397
Alignment:
Q  197 aactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  26099361 aactgaactgttacaaactgaactgaactgttattat 26099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 23777030 - 23777155
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    ||||||||| | || |||||||||| ||||  ||  | |||| ||||||||||||||||||| ||||| |||  ||| |||||| |||| ||||| ||||    
T  23777030 ggttcagttcgaaacgaaaactgaatcgaactaaactgaactgtttgctaaatttaaaataattgaactgaactgaaatgtttgtattttgaactgaact 23777129  T
Q  201 gaactgttccaaaccgaactgaactg 226  Q
    |||||||| |||||||||||||||||    
T  23777130 gaactgtttcaaaccgaactgaactg 23777155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 35912238 - 35912115
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    ||||||||| | |||||||||| ||||||| |||  | || | |||  |||||||||||||||| |||| ||   |||||||||||||||||||| |||     
T  35912238 ggttcagttcgaaatgaaaactaaaccgaaccaaactgaattgttttttaaatttaaaataacttaaccaaactaaattgtttgcatttcgaactgaacc 35912139  T
Q  201 gaactgttccaaaccgaactgaac 224  Q
     |||| || |||||||||||||||    
T  35912138 aaactatttcaaaccgaactgaac 35912115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 43341030 - 43341150
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    ||||||||| || |||||||||||||| ||| ||  | || | |||| ||||||||||||||||||||  || ||     ||||||||||||||| ||||    
T  43341030 ggttcagttcgggatgaaaactgaaccaaattaaactgaattgtttgataaatttaaaataactgaactaaaccg-----tttgcatttcgaactgaact 43341124  T
Q  201 gaactgttccaaaccgaactgaactg 226  Q
    ||||||||| ||||  ||||||||||    
T  43341125 gaactgttctaaactaaactgaactg 43341150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 225
Target Start/End: Original strand, 20335639 - 20335763
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    |||||||||||| ||||||||||||  ||| |    | |||| |||| |||||||||||||| | |||| ||||||| |||||| |||| ||||| |||     
T  20335639 ggttcagtttgggatgaaaactgaattgaaccgtattgaactgtttgataaatttaaaataattaaaccaaatcgaactgtttgtatttggaactgaaca 20335738  T
Q  201 gaactgttccaaaccgaactgaact 225  Q
     ||||||| |||| ||||| |||||    
T  20335739 taactgtttcaaatcgaacggaact 20335763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 23803078 - 23803157
Alignment:
Q  144 tttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    ||||||||||||||||||| ||||| |||      ||||| ||||||||| | |||||||||||| |||||||||||||| ||||    
T  23803078 tttgctaaatttaaaataattgaactgaac-----tgtttacatttcgaattgaactgaactgtttcaaaccgaactgaattgtt 23803157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 27081140 - 27081013
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    ||||||||| ||||||||||||||||||||   |  | |||| ||||||||||||||||||||||||     | ||| ||||||||||| ||||| ||||    
T  27081140 ggttcagttcggaatgaaaactgaaccgaactgaactgaactgtttgctaaatttaaaataactgaa-----ttgaactgtttgcattttgaactgaact 27081046  T
Q  201 gaactgttccaaaccgaactgaactgttattat 233  Q
    |||||||| ||||| || ||||||| |||||||    
T  27081045 gaactgtttcaaactgatctgaactattattat 27081013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 205
Target Start/End: Original strand, 5722764 - 5722868
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaact 200  Q
    ||||| |||||| ||||||| ||||||||| |||  | || ||||||||||||||||||||||||||  |||  ||||||||||||||| ||||  ||||    
T  5722764 ggttcggtttgggatgaaaagtgaaccgaaccaaattgaattatttgctaaatttaaaataactgaattgaactgaattgtttgcattttgaacggaact 5722863  T
Q  201 gaact 205  Q
    |||||    
T  5722864 gaact 5722868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 36330550 - 36330461
Alignment:
Q  139 aactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    ||||||||| |||| ||||||||||||||| |||||||| | ||||||||| ||||| || ||||||||| ||||| ||| |||| ||||    
T  36330550 aactatttgttaaaattaaaataactgaactgaatcgaactatttgcattttgaactgaattgaactgtttcaaactgaattgaattgtt 36330461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 14108732 - 14108696
Alignment:
Q  197 aactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||||||||||||||||| ||||||||||||||||||    
T  14108732 aactgaactgttccaaactgaactgaactgttattat 14108696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 55216873 - 55216789
Alignment:
Q  139 aactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    ||||||||| |||||||||||||||||||| |||      ||||||||||||||||| |||||||||||| ||| | |||||||||||||    
T  55216873 aactatttgttaaatttaaaataactgaactgaac-----tgtttgcatttcgaactgaactgaactgtttcaaccagaactgaactgtt 55216789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 36343851 - 36343772
Alignment:
Q  149 taaatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    |||||||||||||| ||||  |||   |||||||||||||| ||| | |||||||||||| |||||| ||||||||||||    
T  36343851 taaatttaaaataattgaattgaactaaattgtttgcattttgaattgaactgaactgtttcaaaccaaactgaactgtt 36343772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 54801625 - 54801686
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaa 167  Q
    |||||||||||| ||||||||||||||||||     |||||| ||||||||||||||||||| ||||    
T  54801625 ggttcagtttgggatgaaaactgaaccgaat-----taaactgtttgctaaatttaaaataattgaa 54801686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 41264845 - 41264901
Alignment:
Q  139 aactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaact 195  Q
    |||| |||| |||||||||||||| ||||| ||||||||||||||| |||| |||||    
T  41264845 aactgtttgttaaatttaaaataattgaactgaatcgaattgtttgtattttgaact 41264901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 36436051 - 36436114
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataact 164  Q
    ||||||||| || |||||||| |||||||| |||  | |||| |||||||||||||||||||||    
T  36436051 ggttcagttcgggatgaaaacagaaccgaaccaaattgaactgtttgctaaatttaaaataact 36436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 37152767 - 37152702
Alignment:
Q  112 gaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaa 177  Q
    ||||||||| |||||||||  ||  | |||| ||||||||||||||||||||||||| ||| ||||    
T  37152767 gaatgaaaattgaaccgaactaaattgaactgtttgctaaatttaaaataactgaactgaaccgaa 37152702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 22786717 - 22786625
Alignment:
Q  101 ggttcagtttggaatgaaaactgaaccgaatcaagataaactatttgctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaa 193  Q
    ||||| ||| || ||||||||||||||||| | |  | |||| ||||||||||||||||||| ||||| ||| | || |||| ||||||||||    
T  22786717 ggttcggttcgggatgaaaactgaaccgaaccgaactgaactgtttgctaaatttaaaataattgaactgaaccaaactgttcgcatttcgaa 22786625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 32567130 - 32567208
Alignment:
Q  151 aatttaaaataactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaactgaactgttattat 233  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| |  | ||   |||| ||||||||||||||||||||||||    
T  32567130 aatttaaaataactgaaccgaactgaactgtttgcatttcgaattggattg---tgtt-caaaccgaactgaactgttattat 32567208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 15661613 - 15661646
Alignment:
Q  137 taaactatttgctaaatttaaaataactgaaccg 170  Q
    |||||||||||||||||||||||||||| |||||    
T  15661613 taaactatttgctaaatttaaaataactaaaccg 15661646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 5993597 - 5993645
Alignment:
Q  147 gctaaatttaaaataactgaaccgaatcgaattgtttgcatttcgaact 195  Q
    |||||||||||||||| |||||  || | ||||||||||||||||||||    
T  5993597 gctaaatttaaaataattgaactaaaccaaattgtttgcatttcgaact 5993645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 45376452 - 45376488
Alignment:
Q  192 aacttaactgaactgttccaaaccgaactgaactgtt 228  Q
    |||| |||||||||||| |||||||||||||||||||    
T  45376452 aactgaactgaactgtttcaaaccgaactgaactgtt 45376488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 47756405 - 47756373
Alignment:
Q  201 gaactgttccaaaccgaactgaactgttattat 233  Q
    |||||||||| ||||||||||||||||||||||    
T  47756405 gaactgttccgaaccgaactgaactgttattat 47756373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 20722 - 20641
Alignment:
Q  144 tttgctaaatttaaaa-----taactgaaccgaatcgaattgtttgcatttcgaacttaactgaactgttccaaaccgaact 220  Q
    ||||||||||||||||     ||||||||| ||| |||| ||||| ||||||||| | ||||||||||||  ||||||||||    
T  20722 tttgctaaatttaaaataaattaactgaactgaaccgaactgtttccatttcgaattgaactgaactgttttaaaccgaact 20641  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 60110 - 60151
Alignment:
Q  192 aacttaactgaactgttccaaaccgaactgaactgttattat 233  Q
    |||| |||||||||||| ||||| ||||||||||||||||||    
T  60110 aactgaactgaactgtttcaaactgaactgaactgttattat 60151  T

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