View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17277_low_164 (Length: 231)
Name: NF17277_low_164
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17277_low_164 |
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Alignment Details
Target: chr2 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 39127944 - 39128107
Alignment:
| Q |
1 |
ggtcccacataaacactgcctcttccttccttcctcccacgctgccactgctacgccatttcttctcagcagaaccaacttctttccttttcaccttccc |
100 |
Q |
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| T |
39127944 |
ggtcccacataaacactgcctctcccttccttcctcccacgctgccactactaagccatttcttctcagcagaaccaacttctttccttttcaccttccc |
39128043 |
T |
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| Q |
101 |
ctttctgttacatttctttttcatcatcatcatattttgtaactgtaagtaagaacaacatttc |
164 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
39128044 |
ctttctgttacatttctttttcatcatcatcatattttctaactgtaagtaagaacaacatttc |
39128107 |
T |
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