View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17277_low_181 (Length: 212)
Name: NF17277_low_181
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17277_low_181 |
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Alignment Details
Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 43094182 - 43094298
Alignment:
| Q |
86 |
agttcttcattcacattctcattccaactattagtatcccaacctttgctatctccatcaacatcaaccctttcttcaccctcaacaaattcttcatttt |
185 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43094182 |
agttcttcattcacattctcattccaactattagtatcccaacctttgctatctccatcaacatcaaccctttcttcaccctcaacaaattcttcatttt |
43094281 |
T |
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| Q |
186 |
cacccttcacaggttct |
202 |
Q |
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|||||||||||| |||| |
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| T |
43094282 |
cacccttcacagattct |
43094298 |
T |
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