View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17277_low_24 (Length: 507)

Name: NF17277_low_24
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17277_low_24
NF17277_low_24
[»] chr3 (33 HSPs)
chr3 (16-499)||(1007181-1007661)
chr3 (16-499)||(1022209-1022689)
chr3 (149-498)||(997294-997643)
chr3 (149-498)||(1013684-1014033)
chr3 (150-223)||(989389-989462)
chr3 (148-223)||(4157927-4158002)
chr3 (150-218)||(4142119-4142187)
chr3 (157-223)||(3754593-3754659)
chr3 (150-218)||(1931139-1931207)
chr3 (160-223)||(803213-803276)
chr3 (151-226)||(2678385-2678460)
chr3 (152-218)||(968669-968735)
chr3 (150-218)||(2696717-2696785)
chr3 (153-223)||(1940567-1940637)
chr3 (152-225)||(2686299-2686375)
chr3 (145-223)||(3746001-3746079)
chr3 (154-246)||(1936969-1937061)
chr3 (151-223)||(7432040-7432112)
chr3 (152-216)||(12133097-12133161)
chr3 (153-216)||(2442039-2442102)
chr3 (165-216)||(2456249-2456300)
chr3 (145-223)||(2459268-2459346)
chr3 (167-216)||(13498224-13498273)
chr3 (154-387)||(956210-956443)
chr3 (165-216)||(771499-771550)
chr3 (157-216)||(2644354-2644413)
chr3 (157-216)||(2659144-2659203)
chr3 (157-216)||(7334231-7334290)
chr3 (165-223)||(1891064-1891122)
chr3 (165-215)||(2631358-2631408)
chr3 (167-217)||(9608346-9608396)
chr3 (456-497)||(1891349-1891390)
chr3 (145-198)||(13479596-13479649)
[»] chr4 (3 HSPs)
chr4 (98-492)||(22672060-22672442)
chr4 (154-223)||(20019761-20019830)
chr4 (154-204)||(20016174-20016224)
[»] chr5 (12 HSPs)
chr5 (150-221)||(11081808-11081879)
chr5 (156-223)||(23766853-23766920)
chr5 (156-223)||(23816701-23816768)
chr5 (158-227)||(23769639-23769708)
chr5 (158-227)||(23819487-23819556)
chr5 (151-223)||(1427679-1427751)
chr5 (157-218)||(23861018-23861079)
chr5 (166-220)||(3181713-3181767)
chr5 (157-227)||(23764252-23764322)
chr5 (167-216)||(20292995-20293044)
chr5 (157-218)||(23732165-23732226)
chr5 (157-218)||(23814085-23814146)
[»] chr8 (1 HSPs)
chr8 (150-223)||(19727874-19727947)
[»] scaffold0044 (1 HSPs)
scaffold0044 (165-217)||(89142-89194)
[»] chr7 (1 HSPs)
chr7 (150-216)||(1078145-1078211)
[»] chr2 (3 HSPs)
chr2 (163-213)||(7168688-7168738)
chr2 (164-216)||(36577366-36577418)
chr2 (163-216)||(7160752-7160805)
[»] chr6 (3 HSPs)
chr6 (153-213)||(370773-370833)
chr6 (164-214)||(19119065-19119115)
chr6 (164-214)||(19126359-19126409)
[»] chr1 (1 HSPs)
chr1 (150-198)||(51381440-51381488)


Alignment Details
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 16 - 499
Target Start/End: Complemental strand, 1007661 - 1007181
Alignment:
Q  16 gttttcaaagtcaatacgctttgaagtaccgtccctacaattataaaaaacatagttgcctatccaaccctctttacacttgaggagcacttgttcatcc 115  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||  |||  |||| ||||| ||  ||||||||||||||||||||||    
T  1007661 gttttcaaagtcaatactctttgaagtacagtccctacaattattaaaaatatagtcacctgcccaatcctctgtaggcttgaggagcacttgttcatcc 1007562  T
Q  116 ttaaaaatatatattgccttcataaagattggcttgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacat 215  Q
    ||||||| |||||||||||||||||||  |||| |||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  1007561 ttaaaaacatatattgccttcataaaggctggcctgtccgaaatagtgaacaatttagtccaggactcgttatttccatattccttcattacccaaacat 1007462  T
Q  216 catcaccacaaagcatagtcaaacaatccctaagaacactcaagtgaaaagtacaagcatcaaccttaccaatatcattgggcaacaaaaccttttggta 315  Q
    |||||||||||| ||  ||||| |||||||||| |||||||||||| |||| |||  |||| |||||||||   ||||||||||| ||||||||||||||    
T  1007461 catcaccacaaaacacggtcaagcaatccctaaaaacactcaagtgcaaagaacatccatctaccttacca---tcattgggcaaaaaaaccttttggta 1007365  T
Q  316 agaatcgttcttcatatctaaagaaaggataaaacattgacttttcttggtatctttagaaaccaaccaattaatcgttccgctcacacattgcccagat 415  Q
    |||||| ||| ||||||||| |||||| |||||||||||||||||||  |||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  1007364 agaatctttcctcatatctagagaaagaataaaacattgacttttctcagtatctttagaaaccagccaattaatcgtgccgctcacacattggccagat 1007265  T
Q  416 ttctgaatagggacaacagcaaaaggtaacattgaaattcttttccatgaattggcacccaaagtatgaaccttcacttcatct 499  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1007264 ttctgaatagggacaacagcaaaagggaacattggaattcttttccatgaattggcacccaaagtatgaaccttcacttcatct 1007181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 16 - 499
Target Start/End: Complemental strand, 1022689 - 1022209
Alignment:
Q  16 gttttcaaagtcaatacgctttgaagtaccgtccctacaattataaaaaacatagttgcctatccaaccctctttacacttgaggagcacttgttcatcc 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||  |||| | ||| ||  ||||||||||||||||||||||    
T  1022689 gttttcaaagtcaatactctttgaagtaccgtccctacaattattaaaaatatagtcgcctgcccaatcttctgtaggcttgaggagcacttgttcatcc 1022590  T
Q  116 ttaaaaatatatattgccttcataaagattggcttgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacat 215  Q
    ||||||| |||||||||||||||||||   ||| ||||  |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  1022589 ttaaaaacatatattgccttcataaaggccggcctgtacaaaatagtgaacaatttagtccatgactcgttatttccatattccttcattacccaaacat 1022490  T
Q  216 catcaccacaaagcatagtcaaacaatccctaagaacactcaagtgaaaagtacaagcatcaaccttaccaatatcattgggcaacaaaaccttttggta 315  Q
    |||||||||||| ||  ||||| |||||||||| |||||||||||| |||| |||  |||| |||||||||   ||||||||||| ||||||||||||||    
T  1022489 catcaccacaaaacacggtcaagcaatccctaaaaacactcaagtgcaaagaacatccatctaccttacca---tcattgggcaaaaaaaccttttggta 1022393  T
Q  316 agaatcgttcttcatatctaaagaaaggataaaacattgacttttcttggtatctttagaaaccaaccaattaatcgttccgctcacacattgcccagat 415  Q
    |||||| ||| ||||||||| |||||| |||||||||||||||||||  |||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  1022392 agaatctttcctcatatctagagaaagaataaaacattgacttttctcagtatctttagaaaccagccaattaatcgtgccgctcacacattggccagat 1022293  T
Q  416 ttctgaatagggacaacagcaaaaggtaacattgaaattcttttccatgaattggcacccaaagtatgaaccttcacttcatct 499  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1022292 ttctgaatagggacaacagcaaaagggaacattggaattcttttccatgaattggcacccaaagtatgaaccttcacttcatct 1022209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 149 - 498
Target Start/End: Complemental strand, 997643 - 997294
Alignment:
Q  149 ttgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcaccacaaagcatagtcaaacaatccctaa 248  Q
    |||||||| || ||||| | ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||| |||  |||| |||||||| |    
T  997643 ttgtaagatatggtgaatagtttagtccaagactctttatttccatattccttcattacccaaacaacatcaccagaaaacatgatcaagcaatccctga 997544  T
Q  249 gaacactcaagtgaaaagtacaagcatcaaccttaccaatatcattgggcaacaaaaccttttggtaagaatcgttcttcatatctaaagaaaggataaa 348  Q
    ||||||||||||||||| |||| ||||| ||||||||   || |||||||||| |||||| ||||||||| |||||| ||| ||| | |||||| |||||    
T  997543 gaacactcaagtgaaaattacatgcatctaccttacc---ataattgggcaacgaaacctcttggtaagactcgttcatcaaatcaagagaaagaataaa 997447  T
Q  349 acattgacttttcttggtatctttagaaaccaaccaattaatcgttccgctcacacattgcccagat---ttctgaatagggacaacagcaaaaggtaac 445  Q
    | ||| ||||| ||| | |||||| ||| ||| |||||||||||| || |||||||||| |||||||   | |||||  |||| ||||| | |||| |||    
T  997446 atatttactttgcttagaatcttttgaagccagccaattaatcgtgccactcacacatttcccagatagctgctgaacggggaaaacagaataagggaac 997347  T
Q  446 attgaaattcttttccatgaattggcacccaaagtatgaaccttcacttcatc 498  Q
    | |||||| |||||||||||||||  ||||||||||| |||||| ||||||||    
T  997346 actgaaatgcttttccatgaattgatacccaaagtataaaccttaacttcatc 997294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 149 - 498
Target Start/End: Complemental strand, 1014033 - 1013684
Alignment:
Q  149 ttgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcaccacaaagcatagtcaaacaatccctaa 248  Q
    |||||||| || ||||| | ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||| |||  |||| |||||||| |    
T  1014033 ttgtaagatatggtgaatagtttagtccaagactctttatttccatattccttcattacccaaacaacatcaccagaaaacatgatcaagcaatccctga 1013934  T
Q  249 gaacactcaagtgaaaagtacaagcatcaaccttaccaatatcattgggcaacaaaaccttttggtaagaatcgttcttcatatctaaagaaaggataaa 348  Q
    ||||||||||||||||| |||| ||||| ||||||||   || |||||||||| |||||| ||||||||| |||||| ||| ||| | |||||| |||||    
T  1013933 gaacactcaagtgaaaattacatgcatctaccttacc---ataattgggcaacgaaacctcttggtaagactcgttcatcaaatcaagagaaagaataaa 1013837  T
Q  349 acattgacttttcttggtatctttagaaaccaaccaattaatcgttccgctcacacattgcccagat---ttctgaatagggacaacagcaaaaggtaac 445  Q
    | ||| ||||| ||| | |||||| ||| |||||||||||||||| || |||||||||| |||||||     |||||  |||| ||||| | |||| |||    
T  1013836 atatttactttgcttagaatcttttgaagccaaccaattaatcgtgccactcacacatttcccagatagccgctgaacggggaaaacagaataagggaac 1013737  T
Q  446 attgaaattcttttccatgaattggcacccaaagtatgaaccttcacttcatc 498  Q
    | |||||| |||||||||||||||  ||||||||||| |||||| ||||||||    
T  1013736 actgaaatgcttttccatgaattgatacccaaagtataaaccttaacttcatc 1013684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 989462 - 989389
Alignment:
Q  150 tgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    |||||||||||||||||||||||||||||||||| |||||||| || ||  |||||||||||||||||||||||    
T  989462 tgtaagaaatagtgaacaatttagtccaagactctttatttccgtactctttcattacccaaacatcatcacca 989389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 4157927 - 4158002
Alignment:
Q  148 cttgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||||| ||||    
T  4157927 cttgtaagagatagtgaacaatttagtccaagactctttatttccatattccttcataagccaaacatcataacca 4158002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 4142119 - 4142187
Alignment:
Q  150 tgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcat 218  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||||    
T  4142119 tgtaaggaatagtgaacaatttagtccaagactctttatttccatattccttcataagccaaacatcat 4142187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 3754659 - 3754593
Alignment:
Q  157 aatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    |||||| |||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||    
T  3754659 aatagtaaacaatttagtccaagactctttatttccatattccttcataacccaaacatcaacacca 3754593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 1931139 - 1931207
Alignment:
Q  150 tgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcat 218  Q
    |||||||||||||||||||||||||||| || || |||||||||| |||| |||| |||||||||||||    
T  1931139 tgtaagaaatagtgaacaatttagtccaggagtctttatttccatgttccatcataacccaaacatcat 1931207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 803213 - 803276
Alignment:
Q  160 agtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    ||||||||| |||||||||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  803213 agtgaacaacttagtccaagactctttatttccatattctttcataacccaaacatcatcacca 803276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 2678385 - 2678460
Alignment:
Q  151 gtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcaccacaa 226  Q
    ||||| ||||||||||||||||||||| ||||| || ||||||||||   |||| |||||||||||||||||||||    
T  2678385 gtaaggaatagtgaacaatttagtccatgactctttttttccatattgtttcataacccaaacatcatcaccacaa 2678460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 968735 - 968669
Alignment:
Q  152 taagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcat 218  Q
    |||||||||||||| ||||||||||| ||||| |||||||||| |||| |||| |||||||||||||    
T  968735 taagaaatagtgaataatttagtccatgactctttatttccatgttccttcataacccaaacatcat 968669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 2696717 - 2696785
Alignment:
Q  150 tgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcat 218  Q
    ||||||| | ||||||||||||| |||||||||| ||||||||||||||| |||| | |||||||||||    
T  2696717 tgtaagatacagtgaacaatttaatccaagactctttatttccatattccttcataatccaaacatcat 2696785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 1940567 - 1940637
Alignment:
Q  153 aagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    ||||||||||||||||||||||||| || || | |||||||| |||| |||| ||||||||||||| ||||    
T  1940567 aagaaatagtgaacaatttagtccacgagtcttgatttccatgttccttcataacccaaacatcatgacca 1940637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 2686299 - 2686375
Alignment:
Q  152 taagaaatagtgaacaatttagtccaagactcgttatttccatattccctc---attacccaaacatcatcaccaca 225  Q
    |||| |||||||||||||||| |||||||||| || |||||||||||| ||   || ||||||||||||||||||||    
T  2686299 taaggaatagtgaacaatttattccaagactctttttttccatattccttcataataacccaaacatcatcaccaca 2686375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 3746079 - 3746001
Alignment:
Q  145 tggcttgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    ||||||||||| |||||| |||||||||||||||||||| |  ||| |||||||| |||| | ||||| ||||||||||    
T  3746079 tggcttgtaaggaatagtcaacaatttagtccaagactcttgctttgcatattccttcataatccaaatatcatcacca 3746001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 1936969 - 1937061
Alignment:
Q  154 agaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcaccacaaagcatagtcaaacaatccct 246  Q
    |||||||||||||||||||| ||| || || ||||||  ||||||| |||| ||||||||||||| |||| ||| |||   ||||||||||||    
T  1936969 agaaatagtgaacaatttagaccaggattctttatttttatattccttcataacccaaacatcataaccaaaaaccatgcacaaacaatccct 1937061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 7432040 - 7432112
Alignment:
Q  151 gtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    ||||||||| ||||||||||||||||| || || ||||||||||||||| ||||   ||||||||||| ||||    
T  7432040 gtaagaaatggtgaacaatttagtccacgattctttatttccatattccttcatactccaaacatcatgacca 7432112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 12133161 - 12133097
Alignment:
Q  152 taagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    ||||||| | |||||||||||||||| |||||  |||||||||| |||||||| |||||||||||    
T  12133161 taagaaacattgaacaatttagtccacgactctctatttccatactccctcataacccaaacatc 12133097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 2442102 - 2442039
Alignment:
Q  153 aagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    |||||| ||||||||||||||||||||| || ||||||||||| ||| |||| | |||||||||    
T  2442102 aagaaagagtgaacaatttagtccaagaatctttatttccatactccttcataatccaaacatc 2442039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 2456300 - 2456249
Alignment:
Q  165 acaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    |||||||||||||||| || ||||||||||||||| |||| |||||||||||    
T  2456300 acaatttagtccaagagtctttatttccatattccttcataacccaaacatc 2456249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 2459346 - 2459268
Alignment:
Q  145 tggcttgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    |||| |||||||||  || |||||||| ||||||||||| ||||||||||||||| |||| | ||||||| ||| ||||    
T  2459346 tggcatgtaagaaacggtaaacaattttgtccaagactctttatttccatattccttcataatccaaacaacatgacca 2459268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 13498273 - 13498224
Alignment:
Q  167 aatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    ||||||||||||||||| ||||||||||||||| |||| | |||||||||    
T  13498273 aatttagtccaagactctttatttccatattccttcataatccaaacatc 13498224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 387
Target Start/End: Complemental strand, 956443 - 956210
Alignment:
Q  154 agaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcaccacaaagcatagtcaaacaatccctaagaaca 253  Q
    ||||||| |||||||||||  ||||||||| || |||||||||||| |||| | |||||||||   |||| ||| |||   ||| |||||||| | ||||    
T  956443 agaaataatgaacaatttatgccaagactctttttttccatattccttcataatccaaacatcgcaaccaaaaatcatgcacaagcaatccctgaaaaca 956344  T
Q  254 ctcaagtgaaaagtacaagcatcaaccttaccaatatcattgggcaacaaaaccttttggtaagaatcgttcttcatatctaaagaaaggataaaacatt 353  Q
    |||||||  |||| ||  ||||| ||||  ||   || || |||||||||||||| ||| ||||| |||||| ||| ||| | |||||  | |||| |||    
T  956343 ctcaagttcaaagaacgtgcatccacctcgcc---ataatcgggcaacaaaacctcttgataagactcgttcctcaaatcaagagaaacaacaaaatatt 956247  T
Q  354 gacttttcttgg---tatctttagaaaccaaccaatt 387  Q
    || ||||| | |    |||||||||||||||||||||    
T  956246 gatttttcctagcataatctttagaaaccaaccaatt 956210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 771499 - 771550
Alignment:
Q  165 acaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    |||||||||||||||| ||  |||||||||||||| |||| |||||||||||    
T  771499 acaatttagtccaagagtctgtatttccatattccttcataacccaaacatc 771550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 2644354 - 2644413
Alignment:
Q  157 aatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||| |||| | |||||||||    
T  2644354 aatagtgtacaatttagtccaagactcttgatttccatactccttcataatccaaacatc 2644413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 2659144 - 2659203
Alignment:
Q  157 aatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||| |||| | |||||||||    
T  2659144 aatagtgtacaatttagtccaagactcttgatttccatactccttcataatccaaacatc 2659203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 7334231 - 7334290
Alignment:
Q  157 aatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    ||||||| ||||||||||||||||||| |||||||| || ||| |||| | |||||||||    
T  7334231 aatagtgtacaatttagtccaagactctttatttccgtagtccttcatgatccaaacatc 7334290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 1891064 - 1891122
Alignment:
Q  165 acaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    |||||||||||||||| || |||||||||| |||| |||| | ||||||||||| ||||    
T  1891064 acaatttagtccaagagtctttatttccatgttccttcataatccaaacatcatgacca 1891122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 2631408 - 2631358
Alignment:
Q  165 acaatttagtccaagactcgttatttccatattccctcattacccaaacat 215  Q
    ||||||||||||||||||| | ||||||||||||| |||| | ||||||||    
T  2631408 acaatttagtccaagactcttgatttccatattccttcataatccaaacat 2631358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 9608346 - 9608396
Alignment:
Q  167 aatttagtccaagactcgttatttccatattccctcattacccaaacatca 217  Q
    |||||||||||||| ||  |||||||||||||| |||| ||||||||||||    
T  9608346 aatttagtccaagaatctatatttccatattccttcataacccaaacatca 9608396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 1891349 - 1891390
Alignment:
Q  456 ttttccatgaattggcacccaaagtatgaaccttcacttcat 497  Q
    ||||||| |||||||  |||||||||||||||||||||||||    
T  1891349 ttttccaagaattggtgcccaaagtatgaaccttcacttcat 1891390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 13479649 - 13479596
Alignment:
Q  145 tggcttgtaagaaatagtgaacaatttagtccaagactcgttatttccatattc 198  Q
    |||| ||| |||||||||||||||||| ||||||||||| | | ||||||||||    
T  13479649 tggcatgttagaaatagtgaacaattttgtccaagactcttgaattccatattc 13479596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 98 - 492
Target Start/End: Original strand, 22672060 - 22672442
Alignment:
Q  98 aggagcacttgttcatccttaaaaatatatattgccttcataaagattggcttgtaagaaatagtgaacaatttagtccaagactcgttatttccatatt 197  Q
    |||||||| |||||||||| |||||||| ||||||||  ||||||  |||| ||||||||||||||||||||||||||||||| || |||||||||||||    
T  22672060 aggagcacatgttcatcctcaaaaatatgtattgcctggataaaggatggcatgtaagaaatagtgaacaatttagtccaagattccttatttccatatt 22672159  T
Q  198 ccctcattacccaaacatcatcaccacaaagcatagtcaaacaatccctaagaacactcaagtgaaaagtacaagcatcaaccttaccaatatcattggg 297  Q
    || ||||||||||||| || |||||| ||| ||   |||| |||||||| |||||||||||| | ||| ||| |||||| ||||  ||   || ||||||    
T  22672160 ccttcattacccaaacgtcgtcaccagaaaacaagatcaagcaatccctgagaacactcaagagcaaaatacgagcatctacctctcc---ataattggg 22672256  T
Q  298 caacaaaaccttttggtaagaatcgttcttcatatctaaagaaaggataaaacattgacttttcttggtatctttagaaaccaaccaattaatcgttccg 397  Q
    |||||||| || || |||||| || |||  || ||| | |||||  ||||||||||||||||||         |||||| |||||||||||||||| ||     
T  22672257 caacaaaatctctttgtaagactcattccccaaatcaagagaaataataaaacattgacttttc---------ttagaagccaaccaattaatcgtgcca 22672347  T
Q  398 ctcacacattgcccagatttctgaatagggacaacagcaaaaggtaacattgaaattcttttccatgaattggcacccaaagtatgaaccttcac 492  Q
    ||||||||||||||||||| || ||| ||   | || || |||| ||||||| ||| |||||||||||||||| ||||||| ||| |||||||||    
T  22672348 ctcacacattgcccagattgctcaatgggtgaagcaacataagggaacattggaatgcttttccatgaattggtacccaaattataaaccttcac 22672442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 20019761 - 20019830
Alignment:
Q  154 agaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    ||||| |||||||||||||||||||||||| | | ||||||||||| |||| ||||||||||||| ||||    
T  20019761 agaaagagtgaacaatttagtccaagactcttgaattccatattccttcatgacccaaacatcattacca 20019830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 20016174 - 20016224
Alignment:
Q  154 agaaatagtgaacaatttagtccaagactcgttatttccatattccctcat 204  Q
    ||||| |||||||||||||||||||||||| | | ||||||||||| ||||    
T  20016174 agaaagagtgaacaatttagtccaagactcttgaattccatattccttcat 20016224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 11081879 - 11081808
Alignment:
Q  150 tgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcac 221  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||    
T  11081879 tgtaaggaatagtaaacaatttagtccaagactctttatttccatactccttcataacccaaacatcatcac 11081808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 23766853 - 23766920
Alignment:
Q  156 aaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    |||||||||||||||||||||||||||| ||||||||||||||  |||| | ||||||||||| ||||    
T  23766853 aaatagtgaacaatttagtccaagactctttatttccatattctttcataatccaaacatcattacca 23766920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 23816701 - 23816768
Alignment:
Q  156 aaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    |||||||||||||||||||||||||||| ||||||||||||||  |||| | ||||||||||| ||||    
T  23816701 aaatagtgaacaatttagtccaagactctttatttccatattctttcataatccaaacatcattacca 23816768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 23769639 - 23769708
Alignment:
Q  158 atagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcaccacaaa 227  Q
    |||||||||||||||||||||||| | ||||| ||||||||| |||| | ||||||||||| || |||||    
T  23769639 atagtgaacaatttagtccaagacgctttattcccatattccttcataatccaaacatcattactacaaa 23769708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 23819487 - 23819556
Alignment:
Q  158 atagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcaccacaaa 227  Q
    |||||||||||||||||||||||| | ||||| ||||||||| |||| | ||||||||||| || |||||    
T  23819487 atagtgaacaatttagtccaagacgctttattcccatattccttcataatccaaacatcattactacaaa 23819556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 1427679 - 1427751
Alignment:
Q  151 gtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    ||||||||| ||||||| |||| ||||||||||  |||||||||| ||  |||| ||||||||||||||||||    
T  1427679 gtaagaaattgtgaacagtttaatccaagactctgtatttccatactctttcataacccaaacatcatcacca 1427751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 23861018 - 23861079
Alignment:
Q  157 aatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcat 218  Q
    ||||||||||||||||||||||||| | ||  | ||||||||| |||||| |||||||||||    
T  23861018 aatagtgaacaatttagtccaagacgctttcatcccatattccttcattatccaaacatcat 23861079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 3181767 - 3181713
Alignment:
Q  166 caatttagtccaagactcgttatttccatattccctcattacccaaacatcatca 220  Q
    ||||||| |||||||||| | ||||||||||||| |||| | |||||||||||||    
T  3181767 caatttaatccaagactcttcatttccatattccttcataagccaaacatcatca 3181713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 23764252 - 23764322
Alignment:
Q  157 aatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcaccacaaa 227  Q
    ||||||||||||| ||||||||||| | ||  | ||||||||| |||||| ||||||||||| || |||||    
T  23764252 aatagtgaacaatgtagtccaagacgctttcatcccatattccttcattatccaaacatcattactacaaa 23764322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 20293044 - 20292995
Alignment:
Q  167 aatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    ||||||||||||||||| ||| ||||||||||| |||| | |||||||||    
T  20293044 aatttagtccaagactctttaattccatattccttcataatccaaacatc 20292995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 23732226 - 23732165
Alignment:
Q  157 aatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcat 218  Q
    ||||||||||| |||| |||||||| | ||||| ||||||||| |||| | |||||||||||    
T  23732226 aatagtgaacagtttattccaagacgctttattcccatattccttcataatccaaacatcat 23732165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 23814085 - 23814146
Alignment:
Q  157 aatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcat 218  Q
    ||||||||||||||||||||||||| |  |  | ||||||||| |||||| |||||||||||    
T  23814085 aatagtgaacaatttagtccaagacgctgtcatcccatattccttcattatccaaacatcat 23814146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 19727947 - 19727874
Alignment:
Q  150 tgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatcatcacca 223  Q
    |||||||||||||||||| ||||||||| ||||| |||||| |||||||  |||| ||||||||||||||||||    
T  19727947 tgtaagaaatagtgaacagtttagtccatgactctttatttgcatattctgtcataacccaaacatcatcacca 19727874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 89194 - 89142
Alignment:
Q  165 acaatttagtccaagactcgttatttccatattccctcattacccaaacatca 217  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||    
T  89194 acaatttagtccaagactctttatttccatattccttcataacccaaatatca 89142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 1078145 - 1078211
Alignment:
Q  150 tgtaagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    ||||||||| | |||||||||||||||| |||||  |||||||||| ||| |||| |||||||||||    
T  1078145 tgtaagaaacattgaacaatttagtccacgactctctatttccatactccttcataacccaaacatc 1078211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 7168688 - 7168738
Alignment:
Q  163 gaacaatttagtccaagactcgttatttccatattccctcattacccaaac 213  Q
    |||||||||||||||||| |||||||||||||||||| |||| | ||||||    
T  7168688 gaacaatttagtccaagaatcgttatttccatattccttcataagccaaac 7168738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 36577418 - 36577366
Alignment:
Q  164 aacaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    ||||||||| |||||||||| ||||||||||||||| |||| | |||||||||    
T  36577418 aacaatttaatccaagactctttatttccatattccttcataatccaaacatc 36577366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 7160752 - 7160805
Alignment:
Q  163 gaacaatttagtccaagactcgttatttccatattccctcattacccaaacatc 216  Q
    |||||||||||||||||| || ||||||||||| ||| |||| | |||||||||    
T  7160752 gaacaatttagtccaagaatcattatttccatactccttcataagccaaacatc 7160805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 370773 - 370833
Alignment:
Q  153 aagaaatagtgaacaatttagtccaagactcgttatttccatattccctcattacccaaac 213  Q
    |||||||| ||||||||||||||||||| || ||||||||||| | | |||| ||||||||    
T  370773 aagaaatattgaacaatttagtccaagaatctttatttccataattcttcataacccaaac 370833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 19119115 - 19119065
Alignment:
Q  164 aacaatttagtccaagactcgttatttccatattccctcattacccaaaca 214  Q
    |||||||||||||||||||| | ||||||||||||| |||| | |||||||    
T  19119115 aacaatttagtccaagactcttcatttccatattccttcatcaaccaaaca 19119065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 19126409 - 19126359
Alignment:
Q  164 aacaatttagtccaagactcgttatttccatattccctcattacccaaaca 214  Q
    |||||||||||||||||||| | ||||||||||||| |||| | |||||||    
T  19126409 aacaatttagtccaagactcttcatttccatattccttcatcaaccaaaca 19126359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 51381440 - 51381488
Alignment:
Q  150 tgtaagaaatagtgaacaatttagtccaagactcgttatttccatattc 198  Q
    |||||| |||| |||||||||||||||||||||| | ||||||||||||    
T  51381440 tgtaaggaatactgaacaatttagtccaagactcttcatttccatattc 51381488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University