View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17277_low_94 (Length: 315)
Name: NF17277_low_94
Description: NF17277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17277_low_94 |
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Alignment Details
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 13981282 - 13981532
Alignment:
| Q |
18 |
caagtaacctctattaactaactaattttgttcatttatctcatggtgcaataggaatcaagacaaattagttttgcatatcagaccccaatattattgt |
117 |
Q |
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| T |
13981282 |
caagtaacctctattaactaactaattttgttcatttatctcatggtgcaataggaatcaagacaaattagttttgcatatcagaccccaatattattgt |
13981381 |
T |
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| Q |
118 |
atcaaaccaactacacaatagtgctttcacatgaacaggctcaaaacatatatatctcatactagttgcaacatcaggactcatagattttataagacca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13981382 |
atcaaaccaactacacaatagtgctttcacatgaacaggctcaaaacatatatatctcatactagttgcaacatcaggactcatagattttataagacca |
13981481 |
T |
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| Q |
218 |
ataaacaaccatacaacatactttatacttcatgtttatgaagagatacac |
268 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
13981482 |
ataaacaaccatacaacatactttacacttcatgtttatgaagagatacac |
13981532 |
T |
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