View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17279_low_5 (Length: 444)

Name: NF17279_low_5
Description: NF17279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17279_low_5
NF17279_low_5
[»] chr1 (12 HSPs)
chr1 (80-419)||(27682935-27683284)
chr1 (361-423)||(34522122-34522184)
chr1 (363-423)||(17836791-17836851)
chr1 (363-423)||(30676669-30676729)
chr1 (360-432)||(50048239-50048311)
chr1 (361-420)||(23224629-23224688)
chr1 (371-416)||(23420485-23420530)
chr1 (377-422)||(11768899-11768944)
chr1 (371-416)||(25664822-25664867)
chr1 (361-389)||(12484510-12484538)
chr1 (394-422)||(25493979-25494007)
chr1 (363-423)||(26202211-26202271)
[»] scaffold0171 (1 HSPs)
scaffold0171 (361-433)||(7349-7421)
[»] chr7 (30 HSPs)
chr7 (371-428)||(7152116-7152173)
chr7 (361-428)||(7143571-7143638)
chr7 (361-423)||(21544680-21544742)
chr7 (361-420)||(7494496-7494555)
chr7 (361-422)||(3401077-3401138)
chr7 (360-432)||(18494554-18494626)
chr7 (361-426)||(4091346-4091411)
chr7 (366-423)||(9687085-9687142)
chr7 (361-422)||(14074486-14074547)
chr7 (361-422)||(14384514-14384575)
chr7 (361-423)||(9121026-9121088)
chr7 (371-416)||(2352143-2352188)
chr7 (376-424)||(9974252-9974300)
chr7 (361-417)||(21473033-21473089)
chr7 (363-410)||(3094189-3094236)
chr7 (377-432)||(7776367-7776422)
chr7 (374-420)||(18497202-18497248)
chr7 (361-423)||(24469089-24469150)
chr7 (361-423)||(24474037-24474098)
chr7 (375-416)||(10925081-10925122)
chr7 (361-408)||(7325825-7325871)
chr7 (361-416)||(12357708-12357762)
chr7 (365-420)||(20342222-20342277)
chr7 (392-423)||(20469611-20469642)
chr7 (361-419)||(7816564-7816622)
chr7 (360-432)||(2629645-2629718)
chr7 (366-423)||(9071394-9071451)
chr7 (363-412)||(9404601-9404650)
chr7 (397-425)||(9404664-9404692)
chr7 (370-417)||(18805843-18805891)
[»] chr4 (17 HSPs)
chr4 (360-423)||(22219947-22220010)
chr4 (361-423)||(20717941-20718003)
chr4 (364-430)||(27303948-27304014)
chr4 (361-423)||(12840698-12840760)
chr4 (366-423)||(13553462-13553519)
chr4 (364-423)||(10450301-10450360)
chr4 (361-420)||(12805768-12805827)
chr4 (361-416)||(25367735-25367789)
chr4 (371-422)||(30797703-30797754)
chr4 (361-423)||(24580011-24580072)
chr4 (361-431)||(47023552-47023622)
chr4 (372-419)||(7023034-7023081)
chr4 (370-432)||(51885876-51885938)
chr4 (359-416)||(17331481-17331537)
chr4 (369-422)||(13066862-13066915)
chr4 (371-416)||(24912140-24912185)
chr4 (371-416)||(32022959-32023004)
[»] chr8 (18 HSPs)
chr8 (361-422)||(12957559-12957620)
chr8 (361-423)||(32240448-32240510)
chr8 (361-413)||(13803097-13803149)
chr8 (361-432)||(26853601-26853672)
chr8 (362-423)||(13305660-13305721)
chr8 (370-416)||(28075675-28075721)
chr8 (375-416)||(18790068-18790109)
chr8 (362-411)||(28900132-28900181)
chr8 (365-417)||(6359202-6359254)
chr8 (393-424)||(13581844-13581875)
chr8 (363-422)||(16048617-16048676)
chr8 (371-422)||(27117426-27117477)
chr8 (361-423)||(23894240-23894302)
chr8 (371-416)||(13528953-13528998)
chr8 (371-416)||(13618492-13618537)
chr8 (363-420)||(24121503-24121560)
chr8 (359-416)||(26883495-26883552)
chr8 (360-408)||(1644395-1644443)
[»] chr6 (20 HSPs)
chr6 (361-422)||(13782408-13782469)
chr6 (361-422)||(13789730-13789791)
chr6 (361-422)||(13803985-13804046)
chr6 (360-428)||(17858936-17859004)
chr6 (361-423)||(15576191-15576253)
chr6 (361-422)||(22727241-22727302)
chr6 (361-413)||(13194289-13194341)
chr6 (361-423)||(6091920-6091982)
chr6 (373-422)||(9395432-9395481)
chr6 (361-417)||(6177908-6177964)
chr6 (377-420)||(15387166-15387209)
chr6 (372-418)||(8037051-8037097)
chr6 (378-420)||(15320088-15320130)
chr6 (377-416)||(11076978-11077017)
chr6 (361-416)||(17320789-17320843)
chr6 (378-420)||(15370729-15370771)
chr6 (361-411)||(16529377-16529427)
chr6 (380-425)||(10323308-10323352)
chr6 (365-422)||(13722679-13722736)
chr6 (372-420)||(15350257-15350305)
[»] chr5 (15 HSPs)
chr5 (360-421)||(16617446-16617507)
chr5 (361-423)||(20715837-20715899)
chr5 (360-423)||(16621468-16621531)
chr5 (360-423)||(19571050-19571113)
chr5 (361-423)||(11273684-11273746)
chr5 (361-423)||(18451061-18451123)
chr5 (361-432)||(17768641-17768712)
chr5 (357-416)||(24518959-24519018)
chr5 (365-423)||(25682149-25682207)
chr5 (377-422)||(26502028-26502073)
chr5 (364-419)||(17029270-17029325)
chr5 (361-409)||(26327873-26327921)
chr5 (361-423)||(29196468-29196531)
chr5 (363-416)||(37899059-37899112)
chr5 (363-419)||(24842959-24843015)
[»] chr2 (16 HSPs)
chr2 (361-423)||(41256208-41256271)
chr2 (361-420)||(31000609-31000668)
chr2 (362-419)||(28455128-28455185)
chr2 (378-416)||(4112299-4112337)
chr2 (371-416)||(17495995-17496040)
chr2 (372-413)||(23854055-23854096)
chr2 (361-402)||(27416083-27416124)
chr2 (379-428)||(30477717-30477766)
chr2 (383-422)||(19593276-19593315)
chr2 (370-416)||(31275304-31275351)
chr2 (362-420)||(32138742-32138799)
chr2 (359-422)||(9516529-9516593)
chr2 (366-422)||(21503386-21503442)
chr2 (361-413)||(24318745-24318797)
chr2 (362-425)||(25475255-25475319)
chr2 (361-432)||(35709006-35709078)
[»] scaffold0386 (2 HSPs)
scaffold0386 (366-422)||(7536-7592)
scaffold0386 (361-422)||(10553-10614)
[»] chr3 (10 HSPs)
chr3 (364-423)||(33913400-33913459)
chr3 (361-422)||(25918086-25918147)
chr3 (366-423)||(10343007-10343064)
chr3 (361-406)||(14419353-14419398)
chr3 (373-416)||(8839674-8839717)
chr3 (361-420)||(16977460-16977519)
chr3 (361-423)||(2728447-2728509)
chr3 (369-422)||(5631505-5631558)
chr3 (360-416)||(14541072-14541128)
chr3 (392-428)||(27416366-27416402)
[»] scaffold0362 (1 HSPs)
scaffold0362 (363-425)||(9959-10021)
[»] scaffold0103 (1 HSPs)
scaffold0103 (363-419)||(36494-36550)
[»] scaffold0855 (1 HSPs)
scaffold0855 (367-423)||(2021-2077)
[»] scaffold0847 (1 HSPs)
scaffold0847 (367-423)||(2186-2242)
[»] scaffold0036 (1 HSPs)
scaffold0036 (382-420)||(27356-27394)
[»] scaffold0006 (1 HSPs)
scaffold0006 (360-406)||(78562-78607)


Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 80 - 419
Target Start/End: Complemental strand, 27683284 - 27682935
Alignment:
Q  80 aattcatcataaattatggggaaaatgcaaggatttatatttgacatgcattatggtagttggatttgtatcaagatcggatagtttatattttaaa--- 176  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||       
T  27683284 aattcatcataaattatgaggaaaatgcaagaatttatatttgacatgcattttggtagttgaatttgtatcaagatcggatagtttatattttaaatat 27683185  T
Q  177 ------gtaggaacttcaaatatttatatttgggtgaggtttagcatggaaaatgagnnnnnnnnnncatgatggaaaagtttaagcaaatcatagatat 270  Q
          |||||||||||||||||||||||||||||||||||||||||| ||||||||           |||||||||||||||||||| | |||||||||    
T  27683184 tttaaagtaggaacttcaaatatttatatttgggtgaggtttagcatgaaaaatgagagttgttttttatgatggaaaagtttaagcagaccatagatat 27683085  T
Q  271 aatannnnnnnattcggacgtccagatttgttacatgttaaagaccaagaacgttttgatggg-atctatgaaataaaaaaggtgactctatgatggacg 369  Q
    ||||       || ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| | ||||||||||    
T  27683084 aatacttttttatgcggacgtccagatttgttacatgttaaagaccaagaacgttttgatggggatttatgaaacaaaaaaggtgaccccatgatggacg 27682985  T
Q  370 aaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttat 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27682984 aaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttat 27682935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 34522184 - 34522122
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  34522184 tgatggaagaaattggcaagtgcaccaaatcgtaacaagtaataaaatagtaagtttatcgtt 34522122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 423
Target Start/End: Original strand, 17836791 - 17836851
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||    
T  17836791 atggacgaaattggcaagtgcaccaaatcataacaagtaagaaagtagtaagtttatcgtt 17836851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 423
Target Start/End: Complemental strand, 30676729 - 30676669
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  30676729 atggacgaacttgacaagttcaccaaatcgtaacaagtaataaagtagtaaatttatcgtt 30676669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 432
Target Start/End: Complemental strand, 50048311 - 50048239
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttcacagg 432  Q
    |||||||||||||||| |||||||| ||||   ||||||||||||||||||||||||||||||| | ||||||    
T  50048311 atgatggacgaaattggcaagtgcatcaaattataacaagtaataaagtagtaagtttatcgttctccacagg 50048239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 23224688 - 23224629
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    |||||| |||||||| |||||||  |||| ||||||||||||||| ||||||||||||||    
T  23224688 tgatgggcgaaattggcaagtgcgtcaaatcgtaacaagtaataaggtagtaagtttatc 23224629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 23420485 - 23420530
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    ||||| |||||| |||||| ||||||||||||||||||||||||||    
T  23420485 aattggcaagtgtaccaaatcgtaacaagtaataaagtagtaagtt 23420530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 422
Target Start/End: Original strand, 11768899 - 11768944
Alignment:
Q  377 caagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||| |||| ||||| ||| ||||||||||||||||||||||    
T  11768899 caagtgcatcaaatcgtaataaggaataaagtagtaagtttatcgt 11768944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 25664822 - 25664867
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    ||||| ||||||||||||| | || |||||||||||||||||||||    
T  25664822 aattggcaagtgcaccaaatcatatcaagtaataaagtagtaagtt 25664867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 389
Target Start/End: Original strand, 12484510 - 12484538
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaa 389  Q
    |||||||||||||||||||||||||||||    
T  12484510 tgatggacgaaattgacaagtgcaccaaa 12484538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 422
Target Start/End: Original strand, 25493979 - 25494007
Alignment:
Q  394 aacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||||||||||||||||||||||||    
T  25493979 aacaagtaataaagtagtaagtttatcgt 25494007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 423
Target Start/End: Original strand, 26202211 - 26202271
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||| |||||||||| | | | ||| | ||||||| |||||||||||||||||||||||    
T  26202211 atggacaaaattgacaattacgcaaaatcataacaagcaataaagtagtaagtttatcgtt 26202271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 361 - 433
Target Start/End: Complemental strand, 7421 - 7349
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttcacaggt 433  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  7421 tgatggacgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagtaagtttatcgttctccacaggt 7349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 7152173 - 7152116
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttca 428  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7152173 aattgacaagtgcaccaaatcgtaacaagtaataaagtagtaagtttatcgtttttca 7152116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 361 - 428
Target Start/End: Complemental strand, 7143638 - 7143571
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttca 428  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  7143638 tgatggatgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagcaagtttatcgttcttca 7143571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 21544680 - 21544742
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  21544680 tgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtttaccgtt 21544742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 7494555 - 7494496
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||    
T  7494555 tgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaattagtaagtttatc 7494496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 3401138 - 3401077
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  3401138 tgatagacgaaattgacaagtgcacaaaatcgtaacaagtaataaagtagtaattttatcgt 3401077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 18494554 - 18494626
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttcacagg 432  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||| | ||||||    
T  18494554 atgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaggtagtaagtttattgttctccacagg 18494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 4091346 - 4091411
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgttttt 426  Q
    ||||| ||||||||| |||||| |||||| ||||||||||||||||||||||||||| || |||||    
T  4091346 tgatgaacgaaattggcaagtgtaccaaatcgtaacaagtaataaagtagtaagtttttcattttt 4091411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 9687085 - 9687142
Alignment:
Q  366 gacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||    
T  9687085 gacgaaattgacaagtgtatcaaatcgtaataagtaataaagtagtaagtttatcgtt 9687142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 14074547 - 14074486
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||||||| ||  |||||||| ||| ||||||||||||||||||||||||||||||||    
T  14074547 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcgt 14074486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 14384575 - 14384514
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||||||| ||  |||||||| ||| ||||||||||||||||||||||||||||||||    
T  14384575 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcgt 14384514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 9121026 - 9121088
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||  ||||| ||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  9121026 tgatggacataattgtcaagtgcgccaaatcgtaacaagtaataaggtagtaagtttatcgtt 9121088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 2352143 - 2352188
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  2352143 aattgacaagtgcatcaaatcgtaacaagtaataaagtagtaagtt 2352188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 424
Target Start/End: Complemental strand, 9974300 - 9974252
Alignment:
Q  376 acaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgttt 424  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  9974300 acaagtgcaccaaatggtaacatgtaataaagtagtaagtttatcgttt 9974252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 417
Target Start/End: Complemental strand, 21473089 - 21473033
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagttt 417  Q
    ||||||||||||||  ||||||||||||| | |||||||| ||||||||||||||||    
T  21473089 tgatggacgaaattatcaagtgcaccaaatcataacaagttataaagtagtaagttt 21473033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 410
Target Start/End: Complemental strand, 3094236 - 3094189
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtag 410  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  3094236 atggaggaaattgacaagagcaccaaatcgtaacaagtaataaagtag 3094189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 7776367 - 7776422
Alignment:
Q  377 caagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttcacagg 432  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||| | ||||||    
T  7776367 caagtgcaccaaatcttaacaagtaacaaagtagtaagtttatcgttctccacagg 7776422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 420
Target Start/End: Complemental strand, 18497248 - 18497202
Alignment:
Q  374 tgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||    
T  18497248 tgacaagtgcaccaaatcgtaacaagtaacaatgtagtaagtttatc 18497202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 24469089 - 24469150
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||| ||||||||||||||| ||||   ||||||||||||| |||||||||||||||||    
T  24469089 tgatggacaaaattgacaagtgcatcaaata-taacaagtaataaggtagtaagtttatcgtt 24469150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 24474037 - 24474098
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||| ||||||||||||||| ||||   ||||||||||||| |||||||||||||||||    
T  24474037 tgatggacaaaattgacaagtgcatcaaata-taacaagtaataaggtagtaagtttatcgtt 24474098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 375 - 416
Target Start/End: Complemental strand, 10925122 - 10925081
Alignment:
Q  375 gacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  10925122 gacaagtgcaccaaatcgtatcaagtaataaagtagtaagtt 10925081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Original strand, 7325825 - 7325871
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagt 408  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  7325825 tgatggacgaa-ttgacaagtgcatcaaatcgtaacaagtaataaagt 7325871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 416
Target Start/End: Original strand, 12357708 - 12357762
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    ||||||||||| ||| ||||||||||| | ||||||||||| ||||||||||||||    
T  12357708 tgatggacgaa-ttgtcaagtgcaccagatcgtaacaagtattaaagtagtaagtt 12357762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 420
Target Start/End: Complemental strand, 20342277 - 20342222
Alignment:
Q  365 ggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    ||||||||||| ||| |||||| || ||||||||||||||||| | ||||||||||    
T  20342277 ggacgaaattggcaaatgcaccgaatcgtaacaagtaataaagcaataagtttatc 20342222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 423
Target Start/End: Original strand, 20469611 - 20469642
Alignment:
Q  392 gtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||||||||||||||||||||||    
T  20469611 gtaacaagtaataaagtagtaagtttatcgtt 20469642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 7816622 - 7816564
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttat 419  Q
    |||||||||||||||||||||||| || |  |||||||||| ||||||| || ||||||    
T  7816622 tgatggacgaaattgacaagtgcatcatattgtaacaagtactaaagtaatatgtttat 7816564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 2629645 - 2629718
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt-tatcgtttttcacagg 432  Q
    ||||| ||||||||||||||||||| ||||  | || ||||| |||||||||||||| ||||||| | ||||||    
T  2629645 atgattgacgaaattgacaagtgcaacaaattgcaataagtagtaaagtagtaagttgtatcgttctccacagg 2629718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 9071451 - 9071394
Alignment:
Q  366 gacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||||  ||| |||| |||| |||||||||||| |||||||||||||| |||||    
T  9071451 gacgaaattagcaactgcatcaaatcgtaacaagtaaaaaagtagtaagtttttcgtt 9071394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 412
Target Start/End: Original strand, 9404601 - 9404650
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagta 412  Q
    ||||||| ||||  ||||||||||||| ||| ||||||||||||||||||    
T  9404601 atggacgtaatttgcaagtgcaccaaatcgtgacaagtaataaagtagta 9404650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Original strand, 9404664 - 9404692
Alignment:
Q  397 aagtaataaagtagtaagtttatcgtttt 425  Q
    |||||||||||||||||||||||||||||    
T  9404664 aagtaataaagtagtaagtttatcgtttt 9404692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 18805843 - 18805891
Alignment:
Q  370 aaattgacaagtgcaccaaaccgta-acaagtaataaagtagtaagttt 417  Q
    |||||||||||||||||||| ||||  ||||||||||| ||||||||||    
T  18805843 aaattgacaagtgcaccaaatcgtacgcaagtaataaaatagtaagttt 18805891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 22220010 - 22219947
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  22220010 atgatggacgaaattgacaagtgcactaaatcataacaagtaataaagtagtaagtttatcgtt 22219947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 20718003 - 20717941
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  20718003 tgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtttatcgtt 20717941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 27304014 - 27303948
Alignment:
Q  364 tggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttcaca 430  Q
    ||||||||||||  ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  27304014 tggacgaaattggtaagtgtaccaaatcgtaataagtaataaagtagtaagtttatcgtttttcaca 27303948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 12840698 - 12840760
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||||| |||||||||  || ||||||||||| |||||||||||||||||||||    
T  12840698 tgatggacgaaattggcaagtgcactgaatcgtaacaagtattaaagtagtaagtttatcgtt 12840760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 13553462 - 13553519
Alignment:
Q  366 gacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||    
T  13553462 gacgaaattgacaagtgtatcaaatcgtaataagtaataaagtagtaagtttatcgtt 13553519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 10450301 - 10450360
Alignment:
Q  364 tggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  10450301 tggatgaaattggcaagtgcaccaaatcgtaacaaataataaagtagtaagtttagcgtt 10450360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 12805768 - 12805827
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    ||||| |||||||||  || ||||||||| ||||||||||||||||||||||||||||||    
T  12805768 tgatgaacgaaattggtaaatgcaccaaatcgtaacaagtaataaagtagtaagtttatc 12805827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 416
Target Start/End: Complemental strand, 25367789 - 25367735
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    ||||||||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  25367789 tgatggacgaa-ttgacaagtgcaccaaatcgaaacaagtaataaagtagtaagtt 25367735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 30797754 - 30797703
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  30797754 aattggcaagtgcatcaaatcgtaacaagtaataaagtagtaagtttatcgt 30797703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 24580072 - 24580011
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||| ||||||| || |||||||||||| ||||||||||||||||||||| |||||||||||    
T  24580072 tgatgtacgaaat-gaaaagtgcaccaaatcgtaacaagtaataaagtagttagtttatcgtt 24580011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 431
Target Start/End: Original strand, 47023552 - 47023622
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttcacag 431  Q
    ||||| ||||||||| ||||| || |||| ||||||||||||||| |||||||||||||| || |||||||    
T  47023552 tgatgaacgaaattggcaagtacatcaaatcgtaacaagtaataaggtagtaagtttatctttcttcacag 47023622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 7023034 - 7023081
Alignment:
Q  372 attgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttat 419  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  7023034 attgataagtgcaccaaatcgtaacaaataataaagtagtaagtttat 7023081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 51885938 - 51885876
Alignment:
Q  370 aaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttcacagg 432  Q
    |||||| |||||||||| || |||| |||||||||||||||||||||||| ||| | ||||||    
T  51885938 aaattggcaagtgcaccgaatcgtatcaagtaataaagtagtaagtttattgttctccacagg 51885876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 416
Target Start/End: Original strand, 17331481 - 17331537
Alignment:
Q  359 tatgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||| ||||||| |||||||||||| ||||  ||||||||||||||||||||    
T  17331481 tatgatggac-aaattgaaaagtgcaccaaatcgtagtaagtaataaagtagtaagtt 17331537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 422
Target Start/End: Complemental strand, 13066915 - 13066862
Alignment:
Q  369 gaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||||||||||| ||||  |||  |||||||||||||||||||| |||||    
T  13066915 gaaattgacaagtgcaacaaattgtataaagtaataaagtagtaagttaatcgt 13066862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 24912140 - 24912185
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||||||||||||  | ||||||||||||||||| |||||    
T  24912140 aattgacaagtgcaccaaattgaaacaagtaataaagtagcaagtt 24912185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 32023004 - 32022959
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||||| || ||| ||||||||||||||||||| ||||||    
T  32023004 aattgacaagtgtactaaatcgtaacaagtaataaagtaataagtt 32022959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 12957620 - 12957559
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  12957620 tgatggacgaaattgacaagtgcactaaatcgtaacaagtaataaagtagtaagcttatcgt 12957559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 32240510 - 32240448
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||| |||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  32240510 tgatggacaaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaagtttatcgtt 32240448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 13803097 - 13803149
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaa 413  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  13803097 tgatggacgaaattgacaagtgcatcaaatcgtaacaagtaataaaatagtaa 13803149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 26853672 - 26853601
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttcacagg 432  Q
    ||||||| |||||||  || ||||||||| |||||||||||||||||||||||||| |||||| | ||||||    
T  26853672 tgatggatgaaattggaaaatgcaccaaatcgtaacaagtaataaagtagtaagttcatcgttctccacagg 26853601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 423
Target Start/End: Complemental strand, 13305721 - 13305660
Alignment:
Q  362 gatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||||||||| ||||||| | |||  |||||||||||||||||||| |||||||||||    
T  13305721 gatggacgaaattggcaagtgcgcaaaattgtaacaagtaataaagtagttagtttatcgtt 13305660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 28075721 - 28075675
Alignment:
Q  370 aaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||    
T  28075721 aaattgacaagtacaccaaattgtaacaagtaataaagtagtaagtt 28075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 375 - 416
Target Start/End: Complemental strand, 18790109 - 18790068
Alignment:
Q  375 gacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  18790109 gacaagtgcaccaaatcgtatcaagtaataaagtagtaagtt 18790068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 411
Target Start/End: Original strand, 28900132 - 28900181
Alignment:
Q  362 gatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagt 411  Q
    |||| ||||||||||||||| |||||||  ||||||||||||||||||||    
T  28900132 gatgaacgaaattgacaagtacaccaaattgtaacaagtaataaagtagt 28900181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 6359254 - 6359202
Alignment:
Q  365 ggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagttt 417  Q
    ||||||||||| ||||||||||||| | |||||| ||||||||||| ||||||    
T  6359254 ggacgaaattggcaagtgcaccaaatcataacaattaataaagtagcaagttt 6359202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 424
Target Start/End: Original strand, 13581844 - 13581875
Alignment:
Q  393 taacaagtaataaagtagtaagtttatcgttt 424  Q
    ||||||||||||||||||||||||||||||||    
T  13581844 taacaagtaataaagtagtaagtttatcgttt 13581875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 422
Target Start/End: Original strand, 16048617 - 16048676
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||||||||  ||||||||||||  |||||||  ||| ||||||||||||||||||    
T  16048617 atggacgaaattggaaagtgcaccaaaatgtaacaaacaatcaagtagtaagtttatcgt 16048676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 27117426 - 27117477
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    ||||| ||| ||||||||| |||| ||||||||||||||||||||| |||||    
T  27117426 aattggcaaatgcaccaaatcgtatcaagtaataaagtagtaagttaatcgt 27117477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 23894302 - 23894240
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||| ||||||||||||||||||||||||  |||| || || ||| ||| |||||||||||||    
T  23894302 tgatagacgaaattgacaagtgcaccaaattgtaaaaaatattaaggtattaagtttatcgtt 23894240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 13528953 - 13528998
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||| |||||||||||| | ||| ||||||||||||||||||||    
T  13528953 aattgataagtgcaccaaatcataataagtaataaagtagtaagtt 13528998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 13618492 - 13618537
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||| |||||||||||| | ||| ||||||||||||||||||||    
T  13618492 aattgataagtgcaccaaatcataataagtaataaagtagtaagtt 13618537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 420
Target Start/End: Complemental strand, 24121560 - 24121503
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    ||||||||||||| || |||||||||| | ||  | ||||||||||||||||||||||    
T  24121560 atggacgaaattggcatgtgcaccaaatcataggaggtaataaagtagtaagtttatc 24121503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 416
Target Start/End: Complemental strand, 26883552 - 26883495
Alignment:
Q  359 tatgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||| |||||| ||||||||||||| | |||||| || |||||| |||||||    
T  26883552 tatgatggacaaaattggcaagtgcaccaaatcataacaaatagtaaagttgtaagtt 26883495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 1644443 - 1644395
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagt 408  Q
    |||||||||||||||| ||||| |||||||  ||||||||||| |||||    
T  1644443 atgatggacgaaattggcaagtacaccaaattgtaacaagtaaaaaagt 1644395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 13782469 - 13782408
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  13782469 tgatggacgaaattgacaagtgcaccaaatcgtaacaattaataaagtagtaagttaatcgt 13782408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 13789791 - 13789730
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  13789791 tgatggacgaaattgacaagtgcaccaaatcgtaacaattaataaagtagtaagttaatcgt 13789730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 13804046 - 13803985
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  13804046 tgatggacgaaattgacaagtgcaccaaatcgtaacaattaataaagtagtaagttaatcgt 13803985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 17858936 - 17859004
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttca 428  Q
    ||||||||||||||||||| ||||| ||||  |||||||||||| ||||||||||||||||||||||||    
T  17858936 atgatggacgaaattgacatgtgcatcaaatagtaacaagtaattaagtagtaagtttatcgtttttca 17859004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 15576253 - 15576191
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||||||||||    
T  15576253 tgatggacgaaattggcaagtgcatcaaatcgtaacaagtaataaagtagtcagtttatcgtt 15576191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 22727302 - 22727241
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||||    
T  22727302 tgatggacaaaattgacaagtgcaccaaattgtaacaagtaataaagtagtaaatttatcgt 22727241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 13194341 - 13194289
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaa 413  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  13194341 tgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaa 13194289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 6091920 - 6091982
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||||||||||||||  ||| ||||| || ||||||||||| ||||||||||||    
T  6091920 tgatggacgaaattgacaagtgcattaaatcgtaaaaaataataaagtagaaagtttatcgtt 6091982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 422
Target Start/End: Original strand, 9395432 - 9395481
Alignment:
Q  373 ttgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  9395432 ttgacaagtgcaacaaatcgtaacaagtaatgaagtagtaagtttatcgt 9395481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 417
Target Start/End: Complemental strand, 6177964 - 6177908
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagttt 417  Q
    |||||||  ||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  6177964 tgatggatcaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt 6177908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 15387209 - 15387166
Alignment:
Q  377 caagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  15387209 caagtgcaccaaatcgtaacaagcaataaagtagtaagtttatc 15387166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 8037097 - 8037051
Alignment:
Q  372 attgacaagtgcaccaaaccgtaacaagtaataaagtagtaagttta 418  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  8037097 attggcaagtgcactaaatcgtaacaagtaataaagtagtaagttta 8037051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 420
Target Start/End: Complemental strand, 15320130 - 15320088
Alignment:
Q  378 aagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  15320130 aagtgcaccaaatcgtaacaagcaataaagtagtaagtttatc 15320088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 416
Target Start/End: Complemental strand, 11077017 - 11076978
Alignment:
Q  377 caagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  11077017 caagtgcaccaaactgtaacaagtaaaaaagtagtaagtt 11076978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 416
Target Start/End: Complemental strand, 17320843 - 17320789
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||| |||||| ||||||||||||| ||||| ||||||||||||||| ||||    
T  17320843 tgatggac-aaattggcaagtgcaccaaatcgtaataagtaataaagtagttagtt 17320789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 420
Target Start/End: Complemental strand, 15370771 - 15370729
Alignment:
Q  378 aagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||    
T  15370771 aagtgcaccaaatcgtaataagcaataaagtagtaagtttatc 15370729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 411
Target Start/End: Complemental strand, 16529427 - 16529377
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagt 411  Q
    ||||||||||||||| || ||||||||||   |||||||||||||||||||    
T  16529427 tgatggacgaaattggcaggtgcaccaaattataacaagtaataaagtagt 16529377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 425
Target Start/End: Original strand, 10323308 - 10323352
Alignment:
Q  380 gtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttt 425  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  10323308 gtgcaccaaactgtatcaagtaataaagtagtaag-ttatcgtttt 10323352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 13722679 - 13722736
Alignment:
Q  365 ggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||| ||||||  ||||| |||||| ||||||||  ||||||||||||||||||||||    
T  13722679 ggaccaaattggaaagtgtaccaaatcgtaacaatcaataaagtagtaagtttatcgt 13722736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 15350305 - 15350257
Alignment:
Q  372 attgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    ||||| ||||||||||||  |||||||| |||||| |||||||||||||    
T  15350305 attgaaaagtgcaccaaattgtaacaagcaataaaatagtaagtttatc 15350257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 16617446 - 16617507
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcg 421  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  16617446 atgatggacgaaactgacaagtgcaccaaatcgtaactagtaataaagtagtaagtttatcg 16617507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 20715899 - 20715837
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||||||||||||||||||||||||  |||| ||||||||| |||||||||||||||||    
T  20715899 tgatggacgaaattgacaagtgcaccaaattgtaataagtaataaggtagtaagtttatcgtt 20715837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 16621468 - 16621531
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| |||||||    
T  16621468 atgatggacgaaactgacaagtgcaccaaatcgtaactagtaataaaatagtaagtctatcgtt 16621531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 19571113 - 19571050
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||| |||||  ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  19571113 atgatggactaaatttgcaagtgcaccaaatcgtaacaaataataaagtagtaagtttatcgtt 19571050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 11273684 - 11273746
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||| |||||| |||||||| ||||  ||||||||||||||||||||||||||||||||    
T  11273684 tgatggacaaaattggcaagtgcatcaaattgtaacaagtaataaagtagtaagtttatcgtt 11273746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 18451061 - 18451123
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||||||| |||||| |||| | |||||||||||||||||| ||||||||||||||    
T  18451061 tgatggacgaaattggcaagtggaccagatcgtaacaagtaataaagttgtaagtttatcgtt 18451123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 17768712 - 17768641
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttcacagg 432  Q
    ||||||||||||||| |||||  |||||| ||||| ||||||||||||||||||||||| ||| | ||||||    
T  17768712 tgatggacgaaattggcaagtaaaccaaatcgtaagaagtaataaagtagtaagtttattgttctccacagg 17768641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 416
Target Start/End: Complemental strand, 24519018 - 24518959
Alignment:
Q  357 tctatgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||||||||| || |||||| | |||| ||||||||||||||||||||||||||    
T  24519018 tctatgatggacgaaactggcaagtgtatcaaatcgtaacaagtaataaagtagtaagtt 24518959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 365 - 423
Target Start/End: Complemental strand, 25682207 - 25682149
Alignment:
Q  365 ggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||||| ||||||||| ||| |||||||||||||||| |||||| |||||||||    
T  25682207 ggacgaaattggcaagtgcactaaatcgtaacaagtaataaaatagtaattttatcgtt 25682149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 422
Target Start/End: Original strand, 26502028 - 26502073
Alignment:
Q  377 caagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  26502028 caagtgcaccaaactgtaacaagtaataaagtagtatgtttatcgt 26502073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 419
Target Start/End: Complemental strand, 17029325 - 17029270
Alignment:
Q  364 tggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttat 419  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| |||||| |||||    
T  17029325 tggacgaaattggcaagtgcaccaaatcgtaacaagaaataaaatagtaattttat 17029270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 26327873 - 26327921
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagta 409  Q
    ||||| ||||||||||||||||||||| |  ||||||||||||||||||    
T  26327873 tgatgaacgaaattgacaagtgcaccacatggtaacaagtaataaagta 26327921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 29196468 - 29196531
Alignment:
Q  361 tgatggacgaaattgacaagtgcacc-aaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||| ||||||||| |||||||||| ||| |||||||  |||||||||||| |||||||||||    
T  29196468 tgatgaacgaaattggcaagtgcaccaaaatcgtaacacataataaagtagttagtttatcgtt 29196531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 37899059 - 37899112
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||| || ||||||||||||| || |||||||| ||||| ||||||||    
T  37899059 atggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagtt 37899112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 419
Target Start/End: Complemental strand, 24843015 - 24842959
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttat 419  Q
    ||||||||||| | |||||  || ||| | |||||||||||||||||||||||||||    
T  24843015 atggacgaaatgggcaagtttactaaatcataacaagtaataaagtagtaagtttat 24842959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 41256208 - 41256271
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagt-agtaagtttatcgtt 423  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  41256208 tgatggacgaaattgacaagtgcaccaaatcgtaacaaataataaagtaagtaagtttatcgtt 41256271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 31000668 - 31000609
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    ||||||||||||||  |||||||| ||||  |||||||||||||||||||||||||||||    
T  31000668 tgatggacgaaatttgcaagtgcatcaaattgtaacaagtaataaagtagtaagtttatc 31000609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 28455128 - 28455185
Alignment:
Q  362 gatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttat 419  Q
    |||||||||||||| ||||| ||||||| | ||||||||| |||||||||||||||||    
T  28455128 gatggacgaaattggcaagtacaccaaatcataacaagtattaaagtagtaagtttat 28455185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 4112337 - 4112299
Alignment:
Q  378 aagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  4112337 aagtgcaccaaaccgtagcaagtaataaagtagtaagtt 4112299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 17495995 - 17496040
Alignment:
Q  371 aattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||    
T  17495995 aattgacaagtgcaccaaatcggaacaagtaatatagtagtaagtt 17496040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 413
Target Start/End: Original strand, 23854055 - 23854096
Alignment:
Q  372 attgacaagtgcaccaaaccgtaacaagtaataaagtagtaa 413  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  23854055 attgacaagtgcaccaaatcataacaagtaataaagtagtaa 23854096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 27416083 - 27416124
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaa 402  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  27416083 tgatggacgaaattgacaattgcaccaaatcgtaacaagtaa 27416124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 428
Target Start/End: Original strand, 30477717 - 30477766
Alignment:
Q  379 agtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttttca 428  Q
    ||||||||||| ||||| || |||||||||||||||||||||||| ||||    
T  30477717 agtgcaccaaatcgtaataaataataaagtagtaagtttatcgttcttca 30477766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 19593315 - 19593276
Alignment:
Q  383 caccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  19593315 caccaaatcgtaacaagtaataaagttgtaagtttatcgt 19593276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 31275351 - 31275304
Alignment:
Q  370 aaattgacaagtgcaccaaaccgtaa-caagtaataaagtagtaagtt 416  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  31275351 aaattggcaagtgcaccaaatcgtaaacaagtaataaagtagtaagtt 31275304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 420
Target Start/End: Original strand, 32138742 - 32138799
Alignment:
Q  362 gatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    ||||||||||||||||||||||   || || ||||||| ||||||||||||||||||||    
T  32138742 gatggacgaaattgacaagtgctaaaatcc-taacaagcaataaagtagtaagtttatc 32138799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 422
Target Start/End: Complemental strand, 9516593 - 9516529
Alignment:
Q  359 tatgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaa-gtagtaagtttatcgt 422  Q
    |||||||||| |||||| |||||||| ||||  |||||| |||| ||| ||||||||||||||||    
T  9516593 tatgatggacaaaattggcaagtgcatcaaattgtaacacgtaaaaaatgtagtaagtttatcgt 9516529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 422
Target Start/End: Original strand, 21503386 - 21503442
Alignment:
Q  366 gacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||||| |||||| | ||||  | ||||| |||||||||||||||||||||||    
T  21503386 gacgaaattggcaagtgtagcaaattgaaacaaataataaagtagtaagtttatcgt 21503442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 24318745 - 24318797
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaa 413  Q
    |||||||||||||||  ||||||||||||  ||||||| |||||||| |||||    
T  24318745 tgatggacgaaattggaaagtgcaccaaattgtaacaattaataaagaagtaa 24318797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 25475319 - 25475255
Alignment:
Q  362 gatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt-tatcgtttt 425  Q
    |||||| ||||||| |||||||||||||   ||||||| | |||||||||||||| |||||||||    
T  25475319 gatggaagaaattggcaagtgcaccaaaatataacaagcagtaaagtagtaagttgtatcgtttt 25475255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 35709078 - 35709006
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt-tatcgtttttcacagg 432  Q
    |||||||||||||||  |||||||||||| || | |||| | |||||||| ||||| ||||||||| ||||||    
T  35709078 tgatggacgaaattgttaagtgcaccaaatcgaagcaagcagtaaagtagcaagttgtatcgttttccacagg 35709006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 422
Target Start/End: Original strand, 7536 - 7592
Alignment:
Q  366 gacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  7536 gacgaaatcgacaagtgcaccaaatcataacaagtaataaagtagtaagtttatcgt 7592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 10553 - 10614
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| |||||| || ||||||    
T  10553 tgatggacgaaattgacaagtgcaccaaatcataacaagtaataatgtagtaggtatatcgt 10614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 33913400 - 33913459
Alignment:
Q  364 tggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||    
T  33913400 tggacgaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaaatttatcgtt 33913459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 25918086 - 25918147
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||||  ||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  25918086 tgatggaaaaaattgacaagtgcaccaaattgtaacaagtaataacgtagtaagtttatcgt 25918147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 10343064 - 10343007
Alignment:
Q  366 gacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||||  ||||||||| ||| |||||| ||||||||| ||||||||||||||||    
T  10343064 gacgaaattagcaagtgcacaaaatcgtaacgagtaataaaatagtaagtttatcgtt 10343007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 406
Target Start/End: Complemental strand, 14419398 - 14419353
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaa 406  Q
    |||| |||||||||| ||||||||||||| ||||||||||||||||    
T  14419398 tgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaa 14419353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 8839717 - 8839674
Alignment:
Q  373 ttgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||    
T  8839717 ttgacaagtgcatcaaaacgtaataagtaataaagtagtaagtt 8839674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 16977519 - 16977460
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    |||||| |||||||| |||||| ||||||  | ||||||||||||| |||||||||||||    
T  16977519 tgatggtcgaaattggcaagtgtaccaaattggaacaagtaataaactagtaagtttatc 16977460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 2728447 - 2728509
Alignment:
Q  361 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    |||||||| |||| | ||| ||||||||| ||||||||  || ||||||||||||||||||||    
T  2728447 tgatggacaaaatgggcaaatgcaccaaatcgtaacaataaacaaagtagtaagtttatcgtt 2728509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 422
Target Start/End: Original strand, 5631505 - 5631558
Alignment:
Q  369 gaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgt 422  Q
    |||||| |||||||||||||| |||| ||||||||||| |||||| || |||||    
T  5631505 gaaatttacaagtgcaccaaatcgtaccaagtaataaattagtaatttaatcgt 5631558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 14541072 - 14541128
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt 416  Q
    |||||||||||||||| ||||| |||||||   ||| |||||||||| |||||||||    
T  14541072 atgatggacgaaattggcaagtacaccaaataataataagtaataaaatagtaagtt 14541128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 428
Target Start/End: Complemental strand, 27416402 - 27416366
Alignment:
Q  392 gtaacaagtaataaagtagtaagtttatcgtttttca 428  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  27416402 gtaacaagtaataaagtagtaaatttattgtttttca 27416366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 425
Target Start/End: Complemental strand, 10021 - 9959
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtttt 425  Q
    ||||| ||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  10021 atggatgaaattggcaaatgcaccaaatcgtaacaagtaataaagtagtaaatttatcgtttt 9959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 363 - 419
Target Start/End: Original strand, 36494 - 36550
Alignment:
Q  363 atggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttat 419  Q
    ||||||||||||| ||||||||||||| |  ||||||||||||||||||||||||||    
T  36494 atggacgaaattggcaagtgcaccaaatcacaacaagtaataaagtagtaagtttat 36550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 2021 - 2077
Alignment:
Q  367 acgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||| ||||||||||||| |||||||| || ||||||||||| |||||||||    
T  2021 acgaaattggcaagtgcaccaaatcgtaacaaatattaaagtagtaaatttatcgtt 2077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 2186 - 2242
Alignment:
Q  367 acgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttatcgtt 423  Q
    ||||||||| ||||||||||||| |||||||| || ||||||||||| |||||||||    
T  2186 acgaaattggcaagtgcaccaaatcgtaacaaatattaaagtagtaaatttatcgtt 2242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 420
Target Start/End: Original strand, 27356 - 27394
Alignment:
Q  382 gcaccaaaccgtaacaagtaataaagtagtaagtttatc 420  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  27356 gcaccaaactgtaacaagtaataaggtagtaagtttatc 27394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 406
Target Start/End: Original strand, 78562 - 78607
Alignment:
Q  360 atgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaa 406  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  78562 atgatggac-aaattgacaagtgcaccaaatcgtaacaagtagtaaa 78607  T

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