View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1727_high_7 (Length: 479)

Name: NF1727_high_7
Description: NF1727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1727_high_7
NF1727_high_7
[»] chr5 (45 HSPs)
chr5 (26-284)||(37066211-37066468)
chr5 (93-283)||(24432389-24432579)
chr5 (93-283)||(8146002-8146192)
chr5 (93-283)||(8541553-8541743)
chr5 (93-283)||(20914839-20915029)
chr5 (93-283)||(31316790-31316980)
chr5 (93-283)||(42365015-42365205)
chr5 (93-283)||(12638869-12639059)
chr5 (93-283)||(13146709-13146899)
chr5 (93-283)||(16286072-16286262)
chr5 (93-283)||(31690609-31690799)
chr5 (93-283)||(35462708-35462897)
chr5 (93-283)||(25962437-25962631)
chr5 (93-283)||(30086536-30086727)
chr5 (349-479)||(37066021-37066151)
chr5 (107-280)||(24439566-24439739)
chr5 (93-221)||(17825249-17825377)
chr5 (349-479)||(37069462-37069592)
chr5 (104-277)||(8143925-8144098)
chr5 (93-282)||(2002125-2002312)
chr5 (160-240)||(20452468-20452548)
chr5 (116-279)||(42273654-42273815)
chr5 (118-279)||(20644021-20644182)
chr5 (116-278)||(34425336-34425497)
chr5 (178-279)||(25840931-25841032)
chr5 (157-233)||(42104287-42104363)
chr5 (116-279)||(11261877-11262040)
chr5 (118-277)||(32079512-32079670)
chr5 (174-280)||(30893242-30893348)
chr5 (200-282)||(36413926-36414008)
chr5 (118-279)||(17351395-17351556)
chr5 (435-479)||(37079212-37079256)
chr5 (116-279)||(43589955-43590118)
chr5 (225-282)||(20039216-20039273)
chr5 (98-277)||(8506424-8506597)
chr5 (98-145)||(1144624-1144671)
chr5 (98-164)||(28907055-28907122)
chr5 (98-164)||(28943450-28943517)
chr5 (355-417)||(36948373-36948435)
chr5 (177-235)||(39505270-39505328)
chr5 (117-170)||(3463917-3463970)
chr5 (116-153)||(15006413-15006450)
chr5 (28-61)||(32433571-32433604)
chr5 (28-61)||(42364955-42364988)
chr5 (118-241)||(3103360-3103480)
[»] chr4 (59 HSPs)
chr4 (28-284)||(39969943-39970198)
chr4 (28-283)||(30776439-30776693)
chr4 (93-283)||(29180367-29180557)
chr4 (93-283)||(53677434-53677624)
chr4 (28-283)||(30777398-30777652)
chr4 (93-284)||(10591457-10591648)
chr4 (93-283)||(37788426-37788616)
chr4 (93-283)||(3043122-3043312)
chr4 (93-283)||(32012282-32012472)
chr4 (93-283)||(43980473-43980663)
chr4 (93-283)||(38940844-38941034)
chr4 (93-283)||(47807170-47807360)
chr4 (93-283)||(49902002-49902192)
chr4 (93-283)||(50768420-50768610)
chr4 (94-283)||(51495125-51495314)
chr4 (93-283)||(9798030-9798220)
chr4 (93-283)||(29899690-29899880)
chr4 (93-283)||(55937658-55937848)
chr4 (93-283)||(38187683-38187871)
chr4 (93-283)||(1620004-1620194)
chr4 (93-284)||(52713038-52713221)
chr4 (93-273)||(27750313-27750493)
chr4 (107-248)||(30011944-30012083)
chr4 (106-282)||(5222249-5222425)
chr4 (183-283)||(28681724-28681824)
chr4 (103-273)||(17799126-17799296)
chr4 (98-231)||(40553754-40553887)
chr4 (116-197)||(5234043-5234124)
chr4 (106-235)||(32410321-32410450)
chr4 (116-279)||(4058718-4058881)
chr4 (116-279)||(20281594-20281757)
chr4 (116-279)||(47867882-47868045)
chr4 (177-279)||(8683292-8683394)
chr4 (194-272)||(17236262-17236340)
chr4 (118-279)||(5483264-5483425)
chr4 (98-231)||(8013123-8013256)
chr4 (177-278)||(42915594-42915695)
chr4 (103-279)||(5064641-5064817)
chr4 (177-273)||(35310734-35310830)
chr4 (103-235)||(37911874-37912006)
chr4 (98-201)||(23978179-23978282)
chr4 (116-279)||(39078160-39078322)
chr4 (120-279)||(2229254-2229413)
chr4 (116-279)||(29203509-29203672)
chr4 (177-279)||(7654681-7654783)
chr4 (118-216)||(25297271-25297369)
chr4 (116-233)||(1585379-1585496)
chr4 (98-234)||(46070553-46070687)
chr4 (177-233)||(48793660-48793716)
chr4 (116-147)||(17236342-17236373)
chr4 (116-279)||(24940368-24940531)
chr4 (116-279)||(28668987-28669149)
chr4 (27-61)||(47806808-47806842)
chr4 (106-167)||(7652121-7652182)
chr4 (178-235)||(8018445-8018502)
chr4 (178-279)||(21722668-21722769)
chr4 (98-239)||(28142648-28142788)
chr4 (28-61)||(29180588-29180621)
chr4 (28-60)||(53677656-53677688)
[»] chr2 (56 HSPs)
chr2 (30-283)||(14565361-14565614)
chr2 (93-283)||(792344-792534)
chr2 (93-283)||(21539735-21539925)
chr2 (93-283)||(10478156-10478346)
chr2 (93-283)||(35832390-35832580)
chr2 (93-283)||(38549631-38549821)
chr2 (98-283)||(44803881-44804066)
chr2 (93-279)||(28492498-28492684)
chr2 (93-280)||(4091989-4092176)
chr2 (93-283)||(5091528-5091718)
chr2 (93-283)||(8784373-8784563)
chr2 (93-283)||(43075728-43075917)
chr2 (93-284)||(29514462-29514653)
chr2 (93-268)||(4033678-4033853)
chr2 (93-283)||(33635314-33635504)
chr2 (93-283)||(43451483-43451673)
chr2 (28-284)||(29514007-29514261)
chr2 (93-275)||(28424252-28424433)
chr2 (143-283)||(10979197-10979337)
chr2 (115-280)||(18833901-18834066)
chr2 (93-283)||(38071438-38071616)
chr2 (98-279)||(15068718-15068899)
chr2 (98-247)||(13822794-13822943)
chr2 (98-282)||(9294638-9294822)
chr2 (93-163)||(22162298-22162368)
chr2 (218-283)||(15858677-15858742)
chr2 (98-282)||(32010089-32010273)
chr2 (157-279)||(7645219-7645341)
chr2 (116-279)||(3201331-3201494)
chr2 (118-279)||(29524033-29524194)
chr2 (118-279)||(9864710-9864870)
chr2 (116-279)||(35517128-35517291)
chr2 (232-283)||(38564705-38564756)
chr2 (177-279)||(25572111-25572213)
chr2 (26-141)||(15858740-15858854)
chr2 (98-235)||(26998304-26998441)
chr2 (116-279)||(19264104-19264268)
chr2 (179-282)||(35022967-35023069)
chr2 (177-279)||(8701668-8701770)
chr2 (118-279)||(12938249-12938410)
chr2 (116-277)||(28599142-28599303)
chr2 (179-279)||(40808712-40808811)
chr2 (103-170)||(20380115-20380182)
chr2 (116-279)||(6110191-6110356)
chr2 (98-231)||(9709501-9709633)
chr2 (106-235)||(32273666-32273795)
chr2 (192-280)||(33932914-33933002)
chr2 (98-170)||(44442118-44442190)
chr2 (116-279)||(45660370-45660536)
chr2 (174-278)||(4707484-4707585)
chr2 (185-279)||(6765925-6766019)
chr2 (28-61)||(792565-792598)
chr2 (190-231)||(11825395-11825436)
chr2 (178-279)||(43415468-43415569)
chr2 (98-201)||(8032738-8032842)
chr2 (118-234)||(30830633-30830749)
[»] chr8 (54 HSPs)
chr8 (93-283)||(3099934-3100124)
chr8 (28-283)||(35259974-35260228)
chr8 (93-283)||(27621111-27621301)
chr8 (93-283)||(27752567-27752757)
chr8 (93-283)||(31133019-31133209)
chr8 (93-283)||(44052602-44052792)
chr8 (93-283)||(11992709-11992899)
chr8 (93-283)||(11044038-11044228)
chr8 (93-283)||(24612470-24612660)
chr8 (93-283)||(44411199-44411389)
chr8 (28-283)||(35344283-35344538)
chr8 (93-283)||(37598051-37598240)
chr8 (95-283)||(34713511-34713699)
chr8 (93-283)||(39187214-39187401)
chr8 (93-283)||(25321576-25321766)
chr8 (93-283)||(36538039-36538229)
chr8 (96-255)||(37567449-37567608)
chr8 (93-283)||(35346294-35346484)
chr8 (93-283)||(32678508-32678689)
chr8 (93-248)||(33851048-33851203)
chr8 (93-256)||(44358508-44358671)
chr8 (93-282)||(2238586-2238773)
chr8 (98-243)||(41426325-41426470)
chr8 (93-283)||(12108151-12108326)
chr8 (137-260)||(40486505-40486628)
chr8 (93-282)||(24510688-24510875)
chr8 (115-248)||(16643386-16643519)
chr8 (98-278)||(34899910-34900090)
chr8 (156-279)||(29920262-29920385)
chr8 (116-279)||(34890168-34890331)
chr8 (103-282)||(27740597-27740772)
chr8 (185-269)||(15824641-15824725)
chr8 (115-279)||(26483534-26483698)
chr8 (208-279)||(2052958-2053029)
chr8 (118-277)||(6401625-6401784)
chr8 (116-279)||(36190775-36190938)
chr8 (93-144)||(40487794-40487845)
chr8 (103-201)||(25195118-25195216)
chr8 (118-231)||(5217397-5217510)
chr8 (98-235)||(41362345-41362482)
chr8 (98-282)||(2628155-2628339)
chr8 (116-279)||(8709780-8709941)
chr8 (116-279)||(7022397-7022560)
chr8 (98-201)||(8673366-8673469)
chr8 (98-201)||(17336727-17336830)
chr8 (116-279)||(43216341-43216504)
chr8 (116-248)||(13143767-13143899)
chr8 (95-231)||(17713205-17713341)
chr8 (98-170)||(41791563-41791635)
chr8 (98-157)||(16635429-16635488)
chr8 (98-157)||(16635697-16635756)
chr8 (116-203)||(35456094-35456181)
chr8 (117-170)||(17314834-17314887)
chr8 (28-61)||(37597987-37598020)
[»] chr7 (62 HSPs)
chr7 (28-283)||(43107852-43108107)
chr7 (29-283)||(23106366-23106620)
chr7 (93-283)||(35181169-35181359)
chr7 (37-283)||(3157358-3157603)
chr7 (93-283)||(19933002-19933192)
chr7 (93-283)||(42617648-42617838)
chr7 (36-284)||(45598825-45599073)
chr7 (93-283)||(22111277-22111467)
chr7 (93-283)||(40583122-40583312)
chr7 (93-283)||(41889148-41889338)
chr7 (93-283)||(48879365-48879555)
chr7 (93-282)||(47383383-47383572)
chr7 (93-283)||(18206266-18206456)
chr7 (93-283)||(41815640-41815830)
chr7 (106-283)||(7989255-7989432)
chr7 (93-273)||(19964151-19964331)
chr7 (93-283)||(21654068-21654258)
chr7 (93-283)||(40560359-40560549)
chr7 (93-281)||(34808196-34808384)
chr7 (93-283)||(36576395-36576583)
chr7 (93-283)||(32491054-32491244)
chr7 (93-283)||(44600423-44600613)
chr7 (93-283)||(23731537-23731729)
chr7 (93-282)||(48937838-48938026)
chr7 (93-283)||(41890190-41890379)
chr7 (93-283)||(9818456-9818635)
chr7 (93-283)||(10720381-10720560)
chr7 (93-282)||(33153016-33153205)
chr7 (93-203)||(48942942-48943052)
chr7 (98-282)||(35084049-35084233)
chr7 (93-282)||(30082330-30082517)
chr7 (106-282)||(28608363-28608539)
chr7 (93-247)||(29236051-29236204)
chr7 (101-170)||(39348774-39348843)
chr7 (103-247)||(48339245-48339389)
chr7 (116-279)||(45485960-45486123)
chr7 (98-240)||(38260303-38260445)
chr7 (98-170)||(39337512-39337584)
chr7 (116-279)||(25737619-25737782)
chr7 (120-282)||(40593822-40593984)
chr7 (116-277)||(25944581-25944742)
chr7 (98-239)||(35888001-35888142)
chr7 (116-279)||(4910627-4910788)
chr7 (98-282)||(18800715-18800906)
chr7 (103-235)||(31768998-31769130)
chr7 (116-279)||(18102535-18102698)
chr7 (116-279)||(35923257-35923419)
chr7 (177-279)||(47779670-47779772)
chr7 (118-279)||(19912761-19912922)
chr7 (179-279)||(16917539-16917639)
chr7 (116-279)||(6191050-6191213)
chr7 (116-279)||(46760249-46760412)
chr7 (219-282)||(2633326-2633389)
chr7 (172-231)||(10248589-10248648)
chr7 (174-216)||(15995782-15995824)
chr7 (177-279)||(22632155-22632257)
chr7 (103-145)||(28941277-28941319)
chr7 (117-231)||(39170540-39170654)
chr7 (157-282)||(29713235-29713360)
chr7 (28-61)||(41890428-41890461)
chr7 (185-277)||(14574638-14574730)
chr7 (28-60)||(41889084-41889116)
[»] chr3 (71 HSPs)
chr3 (26-283)||(55400651-55400907)
chr3 (28-283)||(21654159-21654414)
chr3 (93-283)||(26641063-26641253)
chr3 (93-283)||(31126191-31126381)
chr3 (93-283)||(46580515-46580704)
chr3 (93-283)||(53020162-53020352)
chr3 (93-283)||(28793140-28793331)
chr3 (93-283)||(37324034-37324225)
chr3 (93-283)||(46296027-46296218)
chr3 (93-283)||(32322190-32322380)
chr3 (93-283)||(49068030-49068220)
chr3 (93-283)||(1335089-1335279)
chr3 (93-283)||(43575936-43576126)
chr3 (93-283)||(51426598-51426788)
chr3 (93-270)||(52252015-52252192)
chr3 (93-266)||(45781376-45781549)
chr3 (36-283)||(16739116-16739352)
chr3 (132-283)||(45347664-45347815)
chr3 (93-283)||(51255165-51255355)
chr3 (140-283)||(34022625-34022768)
chr3 (93-233)||(23513546-23513686)
chr3 (104-282)||(36188958-36189136)
chr3 (98-282)||(51309397-51309581)
chr3 (94-283)||(46820029-46820203)
chr3 (93-216)||(52172028-52172151)
chr3 (95-180)||(13541258-13541343)
chr3 (149-282)||(30612213-30612346)
chr3 (118-282)||(26724940-26725104)
chr3 (118-274)||(34105541-34105697)
chr3 (106-279)||(8096970-8097143)
chr3 (116-279)||(37042369-37042532)
chr3 (116-279)||(50650989-50651152)
chr3 (98-275)||(7886573-7886750)
chr3 (103-235)||(21214231-21214363)
chr3 (227-283)||(23514554-23514610)
chr3 (98-194)||(46303528-46303624)
chr3 (228-283)||(13541347-13541402)
chr3 (116-279)||(35963161-35963324)
chr3 (98-276)||(22479009-22479187)
chr3 (98-231)||(30454725-30454857)
chr3 (103-279)||(10114901-10115077)
chr3 (116-234)||(20847265-20847383)
chr3 (177-279)||(26208084-26208186)
chr3 (174-280)||(31292672-31292778)
chr3 (98-240)||(38401365-38401507)
chr3 (98-170)||(2994479-2994551)
chr3 (103-279)||(10014259-10014435)
chr3 (103-279)||(10252001-10252177)
chr3 (98-170)||(22456069-22456141)
chr3 (98-170)||(47444034-47444106)
chr3 (116-279)||(14752160-14752323)
chr3 (118-221)||(23209290-23209393)
chr3 (98-201)||(34194873-34194976)
chr3 (177-279)||(41476287-41476390)
chr3 (177-275)||(37075030-37075128)
chr3 (117-170)||(25242239-25242292)
chr3 (177-282)||(36546612-36546717)
chr3 (177-282)||(36561598-36561703)
chr3 (177-279)||(2927359-2927462)
chr3 (124-231)||(16032987-16033094)
chr3 (185-235)||(46557166-46557216)
chr3 (177-279)||(46711610-46711712)
chr3 (225-279)||(54464848-54464902)
chr3 (28-61)||(1335025-1335058)
chr3 (28-61)||(49067028-49067061)
chr3 (178-279)||(53270306-53270406)
chr3 (132-248)||(3084163-3084279)
chr3 (28-60)||(23513482-23513514)
chr3 (28-60)||(26641285-26641317)
chr3 (33-61)||(28793081-28793109)
chr3 (117-169)||(54725665-54725717)
[»] chr1 (68 HSPs)
chr1 (28-284)||(40219971-40220228)
chr1 (28-283)||(44875093-44875347)
chr1 (93-283)||(23873819-23874009)
chr1 (93-283)||(38942433-38942623)
chr1 (93-283)||(43656029-43656219)
chr1 (28-279)||(25990662-25990912)
chr1 (93-283)||(28916507-28916697)
chr1 (93-283)||(40935605-40935795)
chr1 (93-283)||(18036522-18036712)
chr1 (93-283)||(18852201-18852391)
chr1 (93-283)||(31970301-31970491)
chr1 (93-283)||(46949299-46949489)
chr1 (93-283)||(26907083-26907271)
chr1 (93-283)||(29488726-29488916)
chr1 (93-283)||(40960466-40960656)
chr1 (93-283)||(28017636-28017824)
chr1 (93-283)||(15285782-15285971)
chr1 (93-283)||(49924397-49924587)
chr1 (28-283)||(9127957-9128211)
chr1 (93-283)||(35941819-35942009)
chr1 (93-283)||(15311156-15311345)
chr1 (93-283)||(45357869-45358058)
chr1 (93-283)||(18913337-18913528)
chr1 (93-284)||(47996932-47997123)
chr1 (93-283)||(26479717-26479907)
chr1 (93-283)||(39026238-39026428)
chr1 (30-283)||(35189116-35189370)
chr1 (95-283)||(6848302-6848486)
chr1 (93-283)||(4529165-4529344)
chr1 (116-280)||(35884212-35884376)
chr1 (107-280)||(36383920-36384093)
chr1 (177-279)||(52984999-52985101)
chr1 (98-203)||(41063728-41063833)
chr1 (115-196)||(44056377-44056458)
chr1 (116-279)||(15959633-15959796)
chr1 (118-279)||(24728619-24728781)
chr1 (98-235)||(25185341-25185478)
chr1 (116-268)||(3861699-3861849)
chr1 (118-241)||(37735414-37735537)
chr1 (106-280)||(7190651-7190825)
chr1 (118-280)||(42724101-42724263)
chr1 (177-279)||(44148829-44148931)
chr1 (118-279)||(3076302-3076463)
chr1 (98-235)||(7397693-7397830)
chr1 (106-223)||(15912193-15912310)
chr1 (105-170)||(44510321-44510386)
chr1 (103-231)||(13291781-13291909)
chr1 (117-201)||(13351686-13351770)
chr1 (116-279)||(39555579-39555742)
chr1 (98-231)||(51338938-51339072)
chr1 (98-231)||(51840536-51840670)
chr1 (118-280)||(52841437-52841599)
chr1 (118-279)||(2126045-2126206)
chr1 (98-231)||(5858412-5858545)
chr1 (116-279)||(33369558-33369718)
chr1 (98-164)||(16661502-16661569)
chr1 (208-279)||(24190566-24190637)
chr1 (190-232)||(2459913-2459955)
chr1 (118-232)||(10558796-10558910)
chr1 (177-279)||(32983165-32983266)
chr1 (185-235)||(46803708-46803758)
chr1 (28-61)||(6848517-6848550)
chr1 (208-276)||(7467958-7468027)
chr1 (28-61)||(15285718-15285751)
chr1 (116-201)||(28120826-28120911)
chr1 (28-61)||(46949235-46949268)
chr1 (135-239)||(30701418-30701522)
chr1 (28-60)||(35941755-35941787)
[»] chr6 (28 HSPs)
chr6 (28-283)||(10227826-10228080)
chr6 (93-282)||(12278684-12278873)
chr6 (29-283)||(17721798-17722051)
chr6 (93-283)||(30766424-30766614)
chr6 (93-283)||(30949113-30949303)
chr6 (93-272)||(17598271-17598450)
chr6 (93-283)||(374077-374267)
chr6 (93-283)||(31887110-31887300)
chr6 (93-255)||(33756234-33756396)
chr6 (103-282)||(32882681-32882862)
chr6 (189-283)||(5121445-5121539)
chr6 (115-282)||(21963957-21964124)
chr6 (98-235)||(4987928-4988065)
chr6 (177-279)||(7274868-7274970)
chr6 (98-235)||(4031972-4032109)
chr6 (115-279)||(35129047-35129212)
chr6 (185-280)||(5822026-5822121)
chr6 (117-235)||(16524384-16524501)
chr6 (116-277)||(11082240-11082401)
chr6 (98-170)||(3888412-3888484)
chr6 (98-241)||(5881783-5881926)
chr6 (178-233)||(7764089-7764144)
chr6 (120-279)||(21542427-21542586)
chr6 (26-61)||(12278618-12278653)
chr6 (118-203)||(12461498-12461583)
chr6 (122-279)||(17751737-17751894)
chr6 (28-60)||(30766360-30766392)
chr6 (177-273)||(30794191-30794287)
[»] scaffold0495 (1 HSPs)
scaffold0495 (28-283)||(4545-4798)
[»] scaffold0330 (1 HSPs)
scaffold0330 (98-235)||(3155-3292)
[»] scaffold0009 (1 HSPs)
scaffold0009 (118-275)||(157801-157958)
[»] scaffold1157 (1 HSPs)
scaffold1157 (104-240)||(1699-1831)
[»] scaffold0062 (1 HSPs)
scaffold0062 (208-279)||(44764-44835)


Alignment Details
Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 26 - 284
Target Start/End: Complemental strand, 37066468 - 37066211
Alignment:
Q  26 tttcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaa 125  Q
    ||||||||| ||||||| |||||||||||||||||| ||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  37066468 tttcatattctttgtcttaaaatataagcaaaaaagactaatttttttgctattattatatttttt-caaacaaataatcttttccaatgtaaaattaaa 37066370  T
Q  126 tgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggaga 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37066369 tgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaagaaga 37066270  T
Q  226 acacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattac 284  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37066269 atacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattac 37066211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 24432579 - 24432389
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24432579 caaataaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttatcctttttattttctccataatttttaaccaatgagaattattt 24432480  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24432479 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 24432389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 8146192 - 8146002
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  8146192 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcttttttattttctccataatttttaactaatgagaattattt 8146093  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  8146092 ttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactgagtgttagttttcttaataagtgtgaatta 8146002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 8541743 - 8541553
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  8541743 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattaaatttgttctccattttattttctccataatttttaaccaatgagaattattt 8541644  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8541643 ttacatctttccaagaaacttattccaagaagaatacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 8541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 20914839 - 20915029
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20914839 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 20914938  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  20914939 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatatcttaaatcactaagtgttagttttcttaataagtgtgaatta 20915029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 31316980 - 31316790
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||| ||| ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  31316980 caaacaaatcatctttttcaatgtaaaattaaatgcaagttgcatttaatctgttcacctttttattttctccataatttttaaccaatgagaattattt 31316881  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  31316880 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataactgtgaatta 31316790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 42365015 - 42365205
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42365015 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 42365114  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||| |||||||||||| ||||| |||||||||||||||| | |||||||    
T  42365115 ttacatctttccatgaaacttattccaataagaacacaaaaaattgtacctcaaatcactaagtattagttttcttaataaatatgaatta 42365205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 12638869 - 12639059
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  12638869 caaacaaattatttttttcaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattattt 12638968  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  12638969 ttacatctttccataaaatttattccaaggagaacacaaaaaattatacctcaaataactaaatgttagttttcttaataagtgtgaatta 12639059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 13146709 - 13146899
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  13146709 caaacaaatcatcttttccaatgtaaaattaaatgtaaattgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattattt 13146808  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  13146809 ttacatctttccataaaacttattccaaagagaacacaaaaaattatacctcaaatcactaagtgttagttttcataataagtatgaatta 13146899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 16286262 - 16286072
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16286262 caaacaaattatctttttcaatgtaaaattaaatgcaagttgcatttagtttgttctcctttttattttctccataatttttaaccaatgagaattattt 16286163  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  16286162 ttacatcttttcatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaatta 16286072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 31690799 - 31690609
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  31690799 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattattt 31690700  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||| |  ||||| |||||||| |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  31690699 ttacatctttctataaaactcattccaagaagaacacaaaaaattatacctcaaatcactaagtattaattttcttaataagtgtgaatta 31690609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 35462897 - 35462708
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||  ||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  35462897 caaacaaaacatctttttcaatgtaaaattaaatgcaaatttcattcaatttattatcctttttattttcttcataatttttaaccaatgagaattattt 35462798  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35462797 ttacatctttccatgaaactta-tccaaggagaaaacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 35462708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 25962631 - 25962437
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaat----tgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaatt 188  Q
    ||||||||| ||||||| |||||||||||||||||||| |    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  25962631 caaacaaatcatctttttcaatgtaaaattaaatgcaagtcatttgcatttaatttgttctactttttattttctccataatttttaaccaatgagaatt 25962532  T
Q  189 atttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25962531 atttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 25962437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 30086727 - 30086536
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||    
T  30086727 caaacaaatcatcttttccaatgtaaaattaaatacaaattgcattcaatttattctcctttttattttctccataatttttagccaatgagaattattt 30086628  T
Q  193 ttacatctttccacgaaacttattccaaggagaacac-aaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||| |||||||| |||||||||| |||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  30086627 ttacttctttccatgaaacttatttcaaggagaacacgaaaaaattatacctcaaattactaaatgttagttttcttaataagtgtgaatta 30086536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 349 - 479
Target Start/End: Complemental strand, 37066151 - 37066021
Alignment:
Q  349 ctcccctcatcatcaacaagaaaatccttgcgatacatttcctactttccctttctttttctagcatggctcacggagtaaattggatcctctgcaatag 448  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37066151 ctcccctcatcatcaactagaaaatccttgcgatacatttcctactttccctttctttttctagcatggctcacggagtaaattggatcctctgcaatag 37066052  T
Q  449 ctacacatatatttgattatgtatcataact 479  Q
    |||||||||||||||||||||||||||||||    
T  37066051 ctacacatatatttgattatgtatcataact 37066021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 107 - 280
Target Start/End: Original strand, 24439566 - 24439739
Alignment:
Q  107 tttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccac 206  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||  ||| ||||||| |||| ||||||||||||||||     
T  24439566 tttccaaagtaaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctttccat 24439665  T
Q  207 gaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
    ||||||||||||||| | |||||||||||||||| ||||||| || | || |||  ||| ||||||||||||||    
T  24439666 gaaacttattccaagaataacacaaaaaattatatctcaaattataatgttttaacttttttaataagtgtgaa 24439739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 17825377 - 17825249
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  17825377 caaacaaatcatatttttcaatgtaaaattaaatgcaaattacattcaatttgtcctcctttttattttctccataatttttaaccaatgagaattattt 17825278  T
Q  193 ttacatctttccacgaaacttattccaag 221  Q
    ||||||||||||   ||||||||||||||    
T  17825277 ttacatctttccctcaaacttattccaag 17825249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 479
Target Start/End: Complemental strand, 37069592 - 37069462
Alignment:
Q  349 ctcccctcatcatcaacaagaaaatccttgcgatacatttcctactttccctttctttttctagcatggctcacggagtaaattggatcctctgcaatag 448  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||| |  ||||||||||| |||||||||||||| ||||||||||||||||||||||| |    
T  37069592 ctcccctcatcgtcaacgagaaaatccatgcgatacatttcctattacccctttcttttcctagcatggctcacagagtaaattggatcctctgcaatgg 37069493  T
Q  449 ctacacatatatttgattatgtatcataact 479  Q
    ||||| | |||||||||||||||||||||||    
T  37069492 ctacagagatatttgattatgtatcataact 37069462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 8143925 - 8144098
Alignment:
Q  104 tcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttc 203  Q
    |||||| ||| ||||||||||||  ||||||||||||||||||| | | ||||||||||||||||||  ||||||||||||||||  |||||| ||||||    
T  8143925 tctttttcaaagtaaaattaaatataaattgcattcaatttgttctacattttattttctccataatcattaaccaatgagaattcgttttacttctttc 8144024  T
Q  204 cacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
     | ||||||||||||||| | || ||||||| ||||||||||||| | || || ||| ||||||||||||||||    
T  8144025 tatgaaacttattccaagaaaaatacaaaaatttatacctcaaattaatatgttttatttttcttaataagtgt 8144098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 93 - 282
Target Start/End: Complemental strand, 2002312 - 2002125
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| |||||||||||  |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||| |||||| |||    
T  2002312 caaaaaaatcatcttttccaaaataaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaattgttt 2002213  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||||||||||||  |||||||||  ||| | |||||  |||||||||| ||||   | ||  | || ||||||||||||||||||||||    
T  2002212 ttacatctttccataaaacttattttaagaaaaacac--aaaattatacttcaagctactatatttttgttttcttaataagtgtgaatt 2002125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 20452548 - 20452468
Alignment:
Q  160 ttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattata 240  Q
    |||||||||||||||||||||| |||||||||||||| |||||| | ||||||||||| ||| ||||  ||||||||||||    
T  20452548 ttctccataatttttaaccaataagaattatttttacttctttctatgaaacttattcgaagaagaatgcaaaaaattata 20452468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 42273654 - 42273815
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||||||||||||||  | ||  ||| |||||||||||||    || ||||||| |||| ||||||||||||   |  |||||| |    
T  42273654 taaaattaaatgcaaattgcattcaattttctctc--tttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 42273751  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  42273752 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 42273815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 279
Target Start/End: Original strand, 20644021 - 20644182
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| ||||||||||    ||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |||    
T  20644021 aaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 20644120  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||| || |||||||||||||||||  |||||  ||| || ||||||||||||||||||||||    
T  20644121 caaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 20644182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 278
Target Start/End: Original strand, 34425336 - 34425497
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    ||||||||||||||||||  |||||||||  | ||  ||||||||| ||||||||   || ||||||| |||| ||||||||| || | |  |||||| |    
T  34425336 taaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatattcctataaaactttt 34425434  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 278  Q
    | ||| || ||||||||||| ||||| ||||||  ||| || |||||||||||||||||||||    
T  34425435 ttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtg 34425497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 25840931 - 25841032
Alignment:
Q  178 caatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    |||||| |||| |||||||||||| ||| |||||||||||||| || ||||||||||| ||| |  |||||  ||| |  ||||||||||||||||||||    
T  25840931 caatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaatttttatgctttagttttcttaataagtgt 25841030  T
Q  278 ga 279  Q
    ||    
T  25841031 ga 25841032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 42104363 - 42104287
Alignment:
Q  157 attttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaa 233  Q
    |||||||||||||||  || ||||||| |||| |||||||||||| ||| ||||||| |||||| ||||||||||||    
T  42104363 attttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaacttgttccaaagagaacacaaaa 42104287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 11262040 - 11261877
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  11262040 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 11261941  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || |||||||||||||||||  |||||  | | |||||||||| ||||||||||||||    
T  11261940 ttcaaagaaaacacaaaaaattatactccaaattctcatgtgttagtttacttaataagtgtga 11261877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 277
Target Start/End: Original strand, 32079512 - 32079670
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    ||||||||||||||||||||| ||||| |  ||| | | ||||||||  ||||   ||| | |||| |||| ||||||||||||||||  ||||| |||     
T  32079512 aaattaaatgcaaattgcatttaatttctc-tccctctcattttctctgtaataaataatcgatgaaaattgtttttacatctttccattaaactaattt 32079610  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    ||||||||||| |||||| ||||   ||||| || | || ||||||||||||||||||||    
T  32079611 caaggagaacataaaaaactataatccaaattataatgttttagttttcttaataagtgt 32079670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 30893348 - 30893242
Alignment:
Q  174 taaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 273  Q
    |||||||| | |||||||||||||||||||||  ||| | |||| ||| | ||||||| ||| |||||  ||||| || | || ||||||||||||||||    
T  30893348 taaccaataaaaattatttttacatctttccataaaattaattctaagaaaaacacaagaaactatactccaaattatcatgttttagttttcttaataa 30893249  T
Q  274 gtgtgaa 280  Q
    |||||||    
T  30893248 gtgtgaa 30893242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 36414008 - 36413926
Alignment:
Q  200 tttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||||| ||||||||||||||  | |||||||||||||||| ||||||  | || || || ||||||||||||||||||||||    
T  36414008 tttccatgaaacttattccaataaaaacacaaaaaattatatctcaaactactatgtttttgttttcttaataagtgtgaatt 36413926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 279
Target Start/End: Original strand, 17351395 - 17351556
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||| ||||| ||||||||||  | ||  | | ||||||||||||||   || ||||| | |||| ||||||||||||||||  ||||||||||    
T  17351395 aaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccataaaacttattc 17351494  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||| || || | |||||| |||||  ||| |  ||| || |||||||||||||||| |||||    
T  17351495 caacgaaaataaaaaaaactatactccaagtttttacgtattagttttcttaataaatgtga 17351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 479
Target Start/End: Complemental strand, 37079256 - 37079212
Alignment:
Q  435 atcctctgcaatagctacacatatatttgattatgtatcataact 479  Q
    |||||||||||| |||||||||||||||||||| |||||||||||    
T  37079256 atcctctgcaatggctacacatatatttgattaagtatcataact 37079212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 43590118 - 43589955
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||  | |  |||||| |    
T  43590118 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 43590019  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    || || || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  43590018 tcaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 43589955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 20039216 - 20039273
Alignment:
Q  225 aacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||||||||||||||||  |||||  ||| || |||||||||||||||||||||||||    
T  20039216 aacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgaatt 20039273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 277
Target Start/End: Original strand, 8506424 - 8506597
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||| | |   ||| |||||||| |||      | ||||||| |||| ||||||||    
T  8506424 aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctatctttcattttctcaata------acccaatgaaaattgtttttaca 8506517  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    |||||| |  ||||||||| |||||| |||| || ||| |||    ||||  | || || ||||||||||||||||||||    
T  8506518 tctttctataaaacttatttcaaggataacataagaaactatgttgcaaactactatgttttagttttcttaataagtgt 8506597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 1144671 - 1144624
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 145  Q
    |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  1144671 aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 1144624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 28907055 - 28907122
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtccttttt-attttctc 164  Q
    |||| ||||||| ||||  ||||||||||||||| ||||||||||||||| || ||||| ||||||||    
T  28907055 aaattatctttttcaatagaaaattaaatgcaaagtgcattcaatttgttctcttttttcattttctc 28907122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 28943450 - 28943517
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtccttttt-attttctc 164  Q
    |||| ||||||| ||||  ||||||||||||||| ||||||||||||||| || ||||| ||||||||    
T  28943450 aaattatctttttcaatagaaaattaaatgcaaagtgcattcaatttgttctcttttttcattttctc 28943517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 36948373 - 36948435
Alignment:
Q  355 tcatcatcaacaagaaaatccttgcgatacatttcctactttccctttctttttctagcatgg 417  Q
    ||||||||||| || | | | ||||| |||||||||||||  |||||||||||||||||||||    
T  36948373 tcatcatcaactagcataccattgcggtacatttcctactacccctttctttttctagcatgg 36948435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 39505328 - 39505270
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    ||||||| |||| |||||||||||| |||  ||||||||||||| || |||||||||||    
T  39505328 ccaatgaaaattgtttttacatcttaccataaaacttattccaaagaaaacacaaaaaa 39505270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 3463970 - 3463917
Alignment:
Q  117 aaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||    
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataat 3463917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 15006450 - 15006413
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctt 153  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  15006450 taaaattaaatacaaattgcattcaatttgttatcctt 15006413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 32433571 - 32433604
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  32433571 tcatattctttgtctcaaaatataagcaaaaaag 32433604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 42364955 - 42364988
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  42364955 tcatattctttgtctcaaaatataagcaaaaaag 42364988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 3103480 - 3103360
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||| |||||||||||| ||||   ||| ||| |||||||  ||||||  |||||||||| |||| ||||| ||| ||| |  ||||||||||     
T  3103480 aaattaaatgtaaattgcattcattttgccctccctttcattttct--ataattaataaccaatgaaaattgttttttcat-ttttcttgaaacttattt 3103384  T
Q  218 caaggagaacacaaaaaattatac 241  Q
    || ||| ||||||| |||||||||    
T  3103383 catggataacacaataaattatac 3103360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 2e-96; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 28 - 284
Target Start/End: Complemental strand, 39970198 - 39969943
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| ||||       |||||||||||        ||| ||||| |||||||||||||||||||||||||    
T  39970198 tcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattat-gttttttcaaccaaatcatcttttccaatgtaaaattaaatg 39970100  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39970099 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaac 39970000  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattac 284  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39969999 acaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattac 39969943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 28 - 283
Target Start/End: Complemental strand, 30776693 - 30776439
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    |||||||||||||||||||||||||||||||||| | ||       | |||||||||        |||| |||| |||||||||||||||||||||||||    
T  30776693 tcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattat-gttttttcaaagaaattatcttttccaatgtaaaattaaatg 30776595  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30776594 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaac 30776495  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30776494 acaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 30776439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 29180557 - 29180367
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29180557 caaagaaattatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 29180458  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29180457 ttacatctttctatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 29180367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 53677624 - 53677434
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53677624 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 53677525  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  53677524 ttacatctttctatgaaactcattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 53677434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 30777398 - 30777652
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    |||||||||||||||||||||||||||||||||| | ||       | |||||||||        |||| |||| |||||||||||||||||||||||||    
T  30777398 tcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattat-gttttttcaaagaaattatcttttccaatgtaaaattaaatg 30777496  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  30777497 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggagaac 30777596  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  30777597 acaaaaaattatacctcaaatcactaattgttagttttcttaataagtgtgaatta 30777652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 93 - 284
Target Start/End: Complemental strand, 10591648 - 10591457
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  10591648 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattggttctcctttttattttttccataatttttaaccaatgagaattattt 10591549  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattac 284  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  10591548 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaattac 10591457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 37788426 - 37788616
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  37788426 caaacaaatcatcttttccaatgtaaaattaaatgcaacttgcatttaatttgttctcttttttattttctccataatttttaaccaatgagaattattt 37788525  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37788526 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 37788616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 3043312 - 3043122
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3043312 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattattt 3043213  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  3043212 ttacatctttccatgaaacttatttcaaggagtacacaaaaaattatacctcaactcactaagtgttagttttcttaataagtgtgaatta 3043122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 32012472 - 32012282
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  32012472 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctctataatttttaaccaatgagaattattt 32012373  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32012372 ttacatctttccatgaaacttaatttaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 32012282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 43980473 - 43980663
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43980473 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattattt 43980572  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||| || |||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  43980573 ttacatcttttcatgaaacttatttcaaggagaacacaaaaatttatacctcaaatcactaaatgttagttttcttaataagtgtgaatta 43980663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 38940844 - 38941034
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||| ||||||||| |||||||||||||||    
T  38940844 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttattcttctttttattttttccaaaatttttaatcaatgagaattattt 38940943  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38940944 ttacatcttttaatgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 38941034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 47807170 - 47807360
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  47807170 caaagaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaacgagaattattt 47807269  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  47807270 ttacatctttccatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaaggattaattttcttaataagtgtgaatta 47807360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 49902002 - 49902192
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49902002 caaacaaatcatcttttccaatataaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 49902101  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||| || ||||||||||||||  |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  49902102 ttacatcttttcatgaaacttattccaactagaacataaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaatta 49902192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 50768420 - 50768610
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  50768420 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattattt 50768519  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||    
T  50768520 ttacatctttccatgaaacttattccaaggaaaacacaaaaaattatatctcgaatcactaagtattagttttcttaataagtgtgaatta 50768610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 94 - 283
Target Start/End: Original strand, 51495125 - 51495314
Alignment:
Q  94 aaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttt 193  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  51495125 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaatcatttt 51495224  T
Q  194 tacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||| || ||||||||||  || ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  51495225 tacatcttttcatgaaacttattataaagagaacacaaaaaattatacctcaaatcattaagtgttaattttcttaataactgtgaatta 51495314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 9798220 - 9798030
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||    
T  9798220 caaacaaatcatcttttccaatgtaaaattaaatgcaaattggattcaatgtgttctcctttttattttctccataatttgtaatcaatgagaattattt 9798121  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  9798120 ttacatctttccatgaaacttatttcaaggagaacgcaaaaaattatacctcaaatcactaaatgttagttttcttaataaatgtgaatta 9798030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 29899690 - 29899880
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||  |||||||||||||| ||| ||||||||||||||||||||||||    
T  29899690 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcacctttttattttcttcatgatttttaaccaatgagaattattt 29899789  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  29899790 ttacatctttccataaaacttattccaaggagaacacaaaaaattatacctcaaatcactacgtgttagttttcttaataaatgtgaatta 29899880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 55937848 - 55937658
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  55937848 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgtatttaatttgttctcctttttatcttctccataatttttaaccaatgagaattattt 55937749  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||| |||||| |||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  55937748 ttacatttttccatgaaacttatttcaaggagaacacaaaaacttatacctcaaatcactaagtgttagttttcttaataagtatgaatta 55937658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 38187871 - 38187683
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  38187871 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcttttttattttctccataatttttaacaaatgagaattattt 38187772  T
Q  193 ttacatctttccacgaaacttattccaaggagaacac-aaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||| || ||||||||||| |   ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38187771 ttacatcttttcatgaaacttattcta---agaacacaaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 38187683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 1620004 - 1620194
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  1620004 caaacaaatcatctttttcaatgtaaaattaaatgcaatttgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattattt 1620103  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||| ||| || ||||||||||| |||||||||||||||||| ||| ||||||||| ||||| |||  || ||||||||||||||||||    
T  1620104 ttacatattttcatgaaacttattctaaggagaacacaaaaaatgatatctcaaatcactaagtattaacttccttaataagtgtgaatta 1620194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 93 - 284
Target Start/End: Original strand, 52713038 - 52713221
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| |||||||||     
T  52713038 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcctttttattttctccataattttcaaccaataagaattatt- 52713136  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattac 284  Q
           |||||| ||||||||||||||| | ||||||||||||||||| |||||||| ||||| |||||||||||||||| | ||||||||    
T  52713137 -------tttccatgaaacttattccaagaaaaacacaaaaaattatacttcaaatcactaagtattagttttcttaataaatatgaattac 52713221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 93 - 273
Target Start/End: Complemental strand, 27750493 - 27750313
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||| ||||||||||||||| | | | ||||||||    
T  27750493 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttattttttccataatttttaacaattaaaaattattt 27750394  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 273  Q
    ||||||||||||| ||||||||||  ||  | |||||||||||| ||| ||||||||| ||| ||||| ||||||||||||    
T  27750393 ttacatctttccatgaaacttattaaaaaaaaaacacaaaaaatcatatctcaaatcactaaatgttaattttcttaataa 27750313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 30012083 - 30011944
Alignment:
Q  107 tttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccac 206  Q
    ||||||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||  ||||||||||| |||| ||||||||||||||||     
T  30012083 tttccaaagtaaaattaaatgcaaattgcattcaatttgttct--tttttattttctccataataattaaccaatgataattgtttttacatctttccat 30011986  T
Q  207 gaaacttattccaaggagaacacaaaaaattatacctcaaat 248  Q
    ||||||||||||||  | ||||||||||||||||||||||||    
T  30011985 gaaacttattccaaaaataacacaaaaaattatacctcaaat 30011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 106 - 282
Target Start/End: Complemental strand, 5222425 - 5222249
Alignment:
Q  106 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 205  Q
    |||||||| |||||||||||||||||||||||| |||||||| |||||||||||||  | |||||  ||| ||||| |||||| ||||||||| |||  |    
T  5222425 ttttccaaagtaaaattaaatgcaaattgcattgaatttgttctcctttttatttttcctataatcattatccaataagaattgtttttacattttttta 5222326  T
Q  206 cgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
     |||||||||| |||| |||||||||||||||||| ||||||| | || || |||||||||||||||||||||||||    
T  5222325 tgaaacttatttcaagaagaacacaaaaaattataactcaaattactatgtattagttttcttaataagtgtgaatt 5222249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 28681724 - 28681824
Alignment:
Q  183 agaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||||||||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  28681724 agaattattttaacatctttccataaaacttattctaaggagaacacaaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaatt 28681823  T
Q  283 a 283  Q
    |    
T  28681824 a 28681824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 17799296 - 17799126
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    ||||||||||| || ||| ||||||||||||||||| |||||||| ||| | | |||||||||||||    |||||||||| |||| ||||||||||||     
T  17799296 atcttttccaaagtgaaactaaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttc 17799197  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 273  Q
    |||  ||||| |||||||| ||||||| | |||||||||  ||||| || |  | ||||||||||||||||    
T  17799196 ccataaaactaattccaagaagaacaccagaaattatactccaaattatcatattttagttttcttaataa 17799126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 98 - 231
Target Start/End: Original strand, 40553754 - 40553887
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| |  ||||||||||||||||||||||| |||  | ||||||| | ||||||||||| |  |||||||||| | || ||||||||    
T  40553754 aaatcatcttttccaaagagaaattaaatgcaaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgtttttaca 40553853  T
Q  198 tctttccacgaaacttattccaaggagaacacaa 231  Q
    |||||| | ||||||||||| ||||| |||||||    
T  40553854 tctttctatgaaacttattctaaggataacacaa 40553887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 5234124 - 5234043
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||||||||||| |||||||||||||||| || ||||||||||||||||||||||  ||||||||| | |||| ||||||||    
T  5234124 taaaattaaatgtaaattgcattcaatttattctcctttttattttctccataataattaaccaataataattgtttttaca 5234043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 32410321 - 32410450
Alignment:
Q  106 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 205  Q
    |||||||| | ||||||||||||||| || |||||||||| | || ||||||||||||| ||||||    | |||||| ||||||||||||||||| | |    
T  32410321 ttttccaaaggaaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataattaactagcaatgaaaattatttttacatcttccta 32410420  T
Q  206 cgaaacttattccaaggagaacacaaaaaa 235  Q
      ||||||||| ||| || |||||||||||    
T  32410421 taaaacttatttcaaagataacacaaaaaa 32410450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 4058718 - 4058881
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  ||| ||||| |||||||    |||||||||| |||| |||||||||||| | |  |||||| |    
T  4058718 taaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctataaaactttt 4058817  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || ||||||||||| |||||  |||||  ||| || |||||||||||||||| |||||    
T  4058818 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 4058881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 20281594 - 20281757
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  20281594 taaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 20281693  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  20281694 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 20281757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 47867882 - 47868045
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  47867882 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 47867981  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  47867982 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 47868045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 8683394 - 8683292
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||||||||||||| |||||| |||||||||||||| || ||||||||||| ||| |  |||||  ||| |  |||||||| ||||||||||    
T  8683394 ccaatgaaaattatttttacatatttccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagtttttttaataagtg 8683295  T
Q  277 tga 279  Q
    |||    
T  8683294 tga 8683292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 17236340 - 17236262
Alignment:
Q  194 tacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaata 272  Q
    ||||| |||| | |||||||||| |||| |||||||||||||||||||||||||  |||| || |||||||||||||||    
T  17236340 tacatttttctatgaaacttatttcaagaagaacacaaaaaattatacctcaaactattatgttttagttttcttaata 17236262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 279
Target Start/End: Complemental strand, 5483425 - 5483264
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||| ||| ||||||||||  | ||  ||  |||||||||||||    || ||||||| |||| |||||||||||| | |  |||||||||     
T  5483425 aaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctattaaacttattt 5483326  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
     || || ||||||||||||||||| ||||||  ||| || ||||||||||||| ||||||||    
T  5483325 taaagaaaacacaaaaaattatacttcaaatttttatgttttagttttcttaacaagtgtga 5483264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 231
Target Start/End: Complemental strand, 8013256 - 8013123
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| |||||||||||   |||||||||||||| ||||||||| | |||| ||  ||| |||||||| || | |  |||||||| | |||| ||||||||    
T  8013256 aaattatcttttccaagtaaaaattaaatgcaatttgcattcattatgttctctctttcattttctctatgactaataaccaataaaaattgtttttaca 8013157  T
Q  198 tctttccacgaaacttattccaaggagaacacaa 231  Q
    |||||| | |||||||||| |||||| |||||||    
T  8013156 tctttctatgaaacttatttcaaggataacacaa 8013123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 42915594 - 42915695
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||||||||||||| |||||||||||||| || ||||||||||| ||| |  |||||  |||  | |||||||| ||||||||||    
T  42915594 ccaatgaaaattgtttttacatctttccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatattttagtttttttaataagtg 42915693  T
Q  277 tg 278  Q
    ||    
T  42915694 tg 42915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 103 - 279
Target Start/End: Complemental strand, 5064817 - 5064641
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    ||||||| ||| | ||||||||||||||| ||||||||||||  | || |||| |||||||| |||||     || ||||| |||| ||||||||||||     
T  5064817 atctttttcaaaggaaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttc 5064718  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |    ||||||||| ||| || |||||||||||||||    ||||| | || || ||||||||||||||||||||||    
T  5064717 ctttaaaacttatttcaaagataacacaaaaaattatgttacaaattactatgttttagttttcttaataagtgtga 5064641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 35310830 - 35310734
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 273  Q
    ||||||| |||| |||||||||||||||| ||||||||||| || || ||||||||||| ||| |  |||||  ||| || ||||||||||||||||    
T  35310830 ccaatgaaaattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgttttagttttcttaataa 35310734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 37911874 - 37912006
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    ||||||||||| | ||||||||||||||| |||||| |||||| | || ||||||||||||| |||||     |||||||| |||| ||||||||| |||    
T  37911874 atcttttccaaaggaaaattaaatgcaaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatattt 37911973  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaa 235  Q
    | |  |||||||||  || || |||||||||||    
T  37911974 ctataaaacttattttaaagataacacaaaaaa 37912006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 23978282 - 23978179
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||     |||||||| |||| ||||||||    
T  23978282 aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttaca 23978183  T
Q  198 tctt 201  Q
    ||||    
T  23978182 tctt 23978179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 39078160 - 39078322
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||| ||| ||||||||||  | ||  ||| ||||| || |||| |  || ||||||| |||| |||||||||||| | |  |||||| |    
T  39078160 taaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatctt-ctataaaactttt 39078258  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  39078259 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 39078322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 279
Target Start/End: Original strand, 2229254 - 2229413
Alignment:
Q  120 attaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattcca 219  Q
    |||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||| | |||| |||||||||||| | |  |||||| |||||    
T  2229254 attaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttcca 2229353  T
Q  220 aggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  2229354 aagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 2229413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 29203509 - 29203672
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||    |    
T  29203509 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaatt 29203608  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || |||||||||||||||||  |||||  ||| || ||||||||||||||||||||||    
T  29203609 tgcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 29203672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 7654681 - 7654783
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||| ||||| | |  |||||| |||||| || ||||||||||| |||||  |||||  ||| || |||||||||||||||||||    
T  7654681 ccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtg 7654780  T
Q  277 tga 279  Q
    |||    
T  7654781 tga 7654783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 25297369 - 25297271
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttatt 216  Q
    |||||||||| ||||| ||||||||||    ||  || |||||||||||||||   || ||||||| |||| |||||||||||||||| ||||||||||    
T  25297369 aaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctttccatgaaacttatt 25297271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 1585496 - 1585379
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||| ||||| ||||||||||  | ||  ||  ||||||||||||||   || ||||| | |||| |||| ||||||||||| |||||||||    
T  1585496 taaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttccatgaaacttat 1585397  T
Q  216 tccaaggagaacacaaaa 233  Q
    | ||| || |||||||||    
T  1585396 ttcaaagaaaacacaaaa 1585379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 234
Target Start/End: Complemental strand, 46070687 - 46070553
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||  | ||  ||| |||||||| ||||     ||||||||| |||| ||||||||    
T  46070687 aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttactctc--tttcattttctcaataaccaacaaccaatgaaaattgtttttaca 46070590  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaa 234  Q
    |||| | |  ||||||||| ||| || ||||||||||    
T  46070589 tcttcctataaaacttatttcaaagacaacacaaaaa 46070553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 48793716 - 48793660
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaa 233  Q
    ||||||| |||| |||||||||||| ||| |||||||||||||| || |||||||||    
T  48793716 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaa 48793660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 17236373 - 17236342
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgtt 147  Q
    ||||||||||||||||||||||||||||||||    
T  17236373 taaaattaaatgcaaattgcattcaatttgtt 17236342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 24940368 - 24940531
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||| ||||| |||| |||||  | ||  ||| |||||||||||||    ||||||| || |||| ||||||||||||   |  |||||| |    
T  24940368 taaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaactttt 24940467  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || || |||||||| |||||  |||||  ||| || |||||||||||||||| |||||    
T  24940468 tccaaagaaaatacaaaaaactatactccaaattcttacgttttagttttcttaataaatgtga 24940531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 28669149 - 28668987
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    ||||||||||| |||||| ||||||||||  | ||  ||| ||||| || |||| |  |||||||||| |||| ||||||||| || | |  |||| | |    
T  28669149 taaaattaaatacaaattacattcaattttctctctctttcattttttc-ataactaataaccaatgaaaattgtttttacattttcctataaaaccttt 28669051  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    || || || ||||||||||| ||||| | ||||  ||| || ||||||||||||||||||||||    
T  28669050 tctaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtga 28668987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 47806808 - 47806842
Alignment:
Q  27 ttcatattatttgtctcaaaatataagcaaaaaag 61  Q
    |||||||| ||||||||||||||||||||||||||    
T  47806808 ttcatattctttgtctcaaaatataagcaaaaaag 47806842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 7652182 - 7652121
Alignment:
Q  106 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccat 167  Q
    |||| ||| ||||||||||||| ||||| || |||||||||| ||| || ||||||||||||    
T  7652182 tttttcaaagtaaaattaaatgaaaatttcactcaatttgttctccattctattttctccat 7652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 8018445 - 8018502
Alignment:
Q  178 caatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    |||||| ||||||||||||||||||  | ||||||||||| ||||| ||| |||||||    
T  8018445 caatgaaaattatttttacatctttatatgaaacttattctaaggataacgcaaaaaa 8018502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 21722769 - 21722668
Alignment:
Q  178 caatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    |||||| ||||||||||||||||| | |  ||||||||| ||| || |||| |||| | ||||| | ||||  ||| || |||||||| |||||||||||    
T  21722769 caatgaaaattatttttacatcttcctataaaacttattacaaagaaaacataaaacactatacttaaaattcttatgttttagttttattaataagtgt 21722670  T
Q  278 ga 279  Q
    ||    
T  21722669 ga 21722668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 28142788 - 28142648
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | |||||||||||||||  ||||| |||||| | || |||| |||||||| |||||     |||||||| |||| ||||||||    
T  28142788 aaattatcttttccaaaggaaaattaaatgcaaa-agcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttaca 28142690  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattat 239  Q
    || | | |  |||||||||  || || |||||||||||||||    
T  28142689 tcctcctataaaacttattttaaagataacacaaaaaattat 28142648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 29180621 - 29180588
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  29180621 tcatattctttgtctcaaaatataagcaaaaaag 29180588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 53677688 - 53677656
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaa 60  Q
    ||||||| |||||||||||||||||||||||||    
T  53677688 tcatattctttgtctcaaaatataagcaaaaaa 53677656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 1e-94; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 30 - 283
Target Start/End: Complemental strand, 14565614 - 14565361
Alignment:
Q  30 atattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatgca 129  Q
    ||||| |||||||||||||||||||||||||| ||||       |||||||||||        |||| |||| |||||||||||||||||||||||||||    
T  14565614 atattctttgtctcaaaatataagcaaaaaagactaacttttatgctattattatgtttttttcaaagaaatcatcttttccaatgtaaaattaaatgca 14565515  T
Q  130 aattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacac 229  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14565514 aattgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaacac 14565415  T
Q  230 aaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14565414 aaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 14565361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 792534 - 792344
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  792534 caaagaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 792435  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  792434 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 792344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 21539735 - 21539925
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  21539735 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattattt 21539834  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21539835 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 21539925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 10478156 - 10478346
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10478156 caaacaaatgatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 10478255  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  10478256 ttacatctttccatgaaacttatttcaaggagaacacaaaaaattatatctcaactcactaagtgttagttttcttaataagtgtgaatta 10478346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 35832390 - 35832580
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||    
T  35832390 caaacaaatcatcttttccaatataaaattaaatgcaaattgcattcaatctgttcacctttttattttctccataatttttaactaatgagaattattt 35832489  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35832490 ttacatctttccatgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 35832580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 38549821 - 38549631
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  38549821 caaataaatcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattattt 38549722  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38549721 ttacatctttccatgaaacttattccaaggagaatacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 38549631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 98 - 283
Target Start/End: Original strand, 44803881 - 44804066
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44803881 aaatcatcttttccaatgtaaaattaaatacaaattgcattcaatttgttctcctatttattttctccataatttttaaccaatgagaattatttttaca 44803980  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  44803981 tctttccattaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaatta 44804066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 279
Target Start/End: Original strand, 28492498 - 28492684
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||||||||||||||||||||    
T  28492498 caaacaaatcattttttccaatgtaaaattaaatgcaaattgcattcaacttattctcctttttattttctctataatttttaaccaatgagaattattt 28492597  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28492598 ttacatatttccatgaaacttattccaaggagaacacaaaaaattatatctcaaatcattaagtgttagttttcttaataagtgtga 28492684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 93 - 280
Target Start/End: Original strand, 4091989 - 4092176
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| ||||||| |||||||||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||    
T  4091989 caaataaatcatctttttcaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttttccataatttttaaccattgagaattattt 4092088  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4092089 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaa 4092176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 5091718 - 5091528
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5091718 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 5091619  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||| || ||||||||||  | | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  5091618 ttacatcttttcatgaaacttattttaggaagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaatta 5091528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 8784373 - 8784563
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||||||||    
T  8784373 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaatcaataagaattattt 8784472  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  8784473 ttacatctttccatgaaacttatttcaagaagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtatgaatta 8784563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 43075728 - 43075917
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  43075728 caaacaaatcatctattccaatgtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaatgaaaattattt 43075827  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| |||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  43075828 ttacatctttccatgaaacttatttcaaggagaaca-taaaaattacacctcaaatcactaagtgttagttttcttaataagtgtgaatta 43075917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 93 - 284
Target Start/End: Complemental strand, 29514653 - 29514462
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29514653 caaacaaatcatctttcccaatgtaaaattaaatgtaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgaaaattattt 29514554  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattac 284  Q
    |||||||||| || ||||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||| ||||||||| ||||||||    
T  29514553 ttacatcttttcatgaaacttattctaaggataacacaaaaaattatacctcaaattactaagtgttagtttttttaataagtatgaattac 29514462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 93 - 268
Target Start/End: Complemental strand, 4033853 - 4033678
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  4033853 caaacaaaacatctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaacgagaattattt 4033754  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttctt 268  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4033753 ttacatctttccatgaaacttattttaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttctt 4033678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 33635314 - 33635504
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33635314 caaacaaatcatcttttctaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 33635413  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||| |||||||||| | |||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||||||    
T  33635414 ttacatctttccatgaaatttattccaagaaaaacacaaaaaattatatctcaaatcactaaatattagttttcttaataagtgtgaatta 33635504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 43451483 - 43451673
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||    
T  43451483 caaacaaatcatctttttcaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgaaaattattt 43451582  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  43451583 ttacatctttccatgaaacttattctaaggagaacacaaaaaatcatacctcaaatcactaaatgttagttttcttaataagtatgaatta 43451673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 28 - 284
Target Start/End: Complemental strand, 29514261 - 29514007
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| | ||       |||||||||||        ||||||||| |||||||  ||||||||||||||||    
T  29514261 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattat-gttttttcaaacaaatcatcttttttaatgtaaaattaaatg 29514163  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||||||||| |||||||||||||||||| || |||| |||||| |||||||||    
T  29514162 caaattgcattcaatttgttctcatttttattttctctataatttttaaccaatgaaaattatttttacatcttttcatgaaatttattctaaggagaac 29514063  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattac 284  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  29514062 acaaaaaattatacctcaaattactaagtgtta-ttttcttaataagtgtgaattac 29514007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 93 - 275
Target Start/End: Original strand, 28424252 - 28424433
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||   || ||||||||    
T  28424252 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgtattcaatttgttctcctttttattttctccataatttttaacc---gaaaattattt 28424348  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatac--ctcaaatcattaagtgttagttttcttaataagt 275  Q
    ||||||||||||| |||||||||||||||||||||||||||  || |||  ||||||||| ||||||||||||||||||||||||    
T  28424349 ttacatctttccatgaaacttattccaaggagaacacaaaattttttacatctcaaatcactaagtgttagttttcttaataagt 28424433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 143 - 283
Target Start/End: Original strand, 10979197 - 10979337
Alignment:
Q  143 ttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacc 242  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  10979197 ttgttctcctttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaacttattccaagaagaacacaaaaaattatacc 10979296  T
Q  243 tcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  10979297 tcaaatcactaagtgttagttttcttaatgagtgtgaatta 10979337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 115 - 280
Target Start/End: Complemental strand, 18834066 - 18833901
Alignment:
Q  115 gtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaactta 214  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||| |||||||||||||||| ||||||||    
T  18834066 gtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataataattaaccaatgataattgtttttacatctttccatgaaactta 18833967  T
Q  215 ttccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
    ||||||| | |||||||||||||||||||||||| |  |  | |||| ||||||||||||||||||    
T  18833966 ttccaagaataacacaaaaaattatacctcaaattacaatattttagctttcttaataagtgtgaa 18833901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 38071616 - 38071438
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||| || ||||||||||| |            |||| |||||| ||||||||||||||||||||||||||||    
T  38071616 caaacaaatcatcttttccaatgtaaaattatatacaaattgcattaa------------tttttttttcttcataatttttaaccaatgagaattattt 38071529  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  38071528 ttacatctttccaaaaaacttattctaaggagaatacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaatta 38071438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 98 - 279
Target Start/End: Original strand, 15068718 - 15068899
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||| |||||| ||| ||||    
T  15068718 aaatcatcttttccaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaattgtttataca 15068817  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |||||| | |||| |||||||||| |||||||||||||| ||||||||||  | |  || || |||||||||||||||||||    
T  15068818 tctttctatgaaatttattccaagaagaacacaaaaaatcatacctcaaactactctgtttttgttttcttaataagtgtga 15068899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 98 - 247
Target Start/End: Complemental strand, 13822943 - 13822794
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||  ||||||||| |||||  ||||||||    
T  13822943 aaataatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcatttctattctctccataatcattaaccaataagaatggtttttaca 13822844  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaa 247  Q
    ||||| || ||||||||||| ||| |||||||||||||||||||||||||    
T  13822843 tcttttcatgaaacttattctaagaagaacacaaaaaattatacctcaaa 13822794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 98 - 282
Target Start/End: Original strand, 9294638 - 9294822
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||| ||| ||||||||||||||||||||||||||||||||| | || | |||| ||||||||||  ||||||||| |||||| ||||||||    
T  9294638 aaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttcttctctctattctctccataatcattaaccaataagaattgtttttaca 9294737  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    | |||||| |||||||||| |||| | || |||||||||||||| |||||  | ||  | |||||||||||||||| || |||||    
T  9294738 tttttccatgaaacttatttcaagaaaaatacaaaaaattatacttcaaactactatcttttagttttcttaataaatgcgaatt 9294822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 22162298 - 22162368
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttct 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  22162298 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttct 22162368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 15858742 - 15858677
Alignment:
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  15858742 caaggagaacacaaaaaattatacctcaaatcactaagtattagttttcttaataaatgtgaatta 15858677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 282
Target Start/End: Original strand, 32010089 - 32010273
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||| ||| | ||||||||||||||| |||||| |||||| | || |||| |||||||| |||||     |||||||| |||||||||||||    
T  32010089 aaattatctttttcaaaggaaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttaca 32010188  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||| | |  ||||||||| ||| || ||||||||||| ||||   ||||  | || || |||||||||||||||||||||||||    
T  32010189 tcttcctataaaacttatttcaaagataacacaaaaaactatattacaaactactatgtattagttttcttaataagtgtgaatt 32010273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 7645341 - 7645219
Alignment:
Q  157 attttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagt 256  Q
    |||||||||||||||  || ||||||| |||| ||||||||| || ||| |||| |||||| ||||| ||||||||| |||||||  |||||  ||| ||    
T  7645341 attttctccataattaatagccaatgaaaattgtttttacatgttcccatgaaatttattctaaggaaaacacaaaatattatactccaaattcttatgt 7645242  T
Q  257 gttagttttcttaataagtgtga 279  Q
     ||||||||||||||||||||||    
T  7645241 tttagttttcttaataagtgtga 7645219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 3201331 - 3201494
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||||| |  |||||| |    
T  3201331 taaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 3201430  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||||||||| ||||| | ||||  ||| || ||||||||||||||||||||||    
T  3201431 tccaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtga 3201494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 279
Target Start/End: Complemental strand, 29524194 - 29524033
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| |||| |||||  | ||  ||||||||| |||||||    |  ||||||| |||| |||||||||||| ||| |||||||||||    
T  29524194 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattc 29524095  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||| || ||||||||||||||| |  |||||  ||| |  ||||||||| ||||||||||||    
T  29524094 caaagaaaacacaaaaaattatgctacaaattcttatgctttagttttcataataagtgtga 29524033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 118 - 279
Target Start/End: Complemental strand, 9864870 - 9864710
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| ||||||||||  | ||  ||  ||||||||||||||   |  ||||||| |||| ||||||| |||| ||| |||||||||||    
T  9864870 aaattaaatgcaaattacattcaattttatctc--ttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccatgaaacttattc 9864773  T
Q  218 caaggagaacacaa-aaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||| || ||||||| |||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  9864772 caaagaaaacacaaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 9864710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 35517128 - 35517291
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| ||||||||||||||||  | |  |||||| |    
T  35517128 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctcactataaaactttt 35517227  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  35517228 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 35517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 38564756 - 38564705
Alignment:
Q  232 aaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  38564756 aaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaatta 38564705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 25572111 - 25572213
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||||||||| ||| |||||||||||||| || ||||||||||| ||| |  |||||  ||| |  |||||||||||||||||||    
T  25572111 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtg 25572210  T
Q  277 tga 279  Q
    |||    
T  25572211 tga 25572213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 15858854 - 15858740
Alignment:
Q  26 tttcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaa 125  Q
    ||||||||| |||||||||||||||||| ||||||| | ||       |||||||||||        |||| |||| |||||||||||||||||||||||    
T  15858854 tttcatattctttgtctcaaaatataagtaaaaaagaccaaattttatgctattattat-gttttttcaaataaatcatcttttccaatgtaaaattaaa 15858756  T
Q  126 tgcaaattgcattcaa 141  Q
    ||||||||||||||||    
T  15858755 tgcaaattgcattcaa 15858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 26998304 - 26998441
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||     |||||||| |||| ||||||||    
T  26998304 aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttaca 26998403  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    |||| | |  |||||||||  || || |||||||||||    
T  26998404 tcttcctataaaacttattttaaagataacacaaaaaa 26998441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 19264104 - 19264268
Alignment:
Q  116 taaaattaaatgcaaa-ttgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaactta 214  Q
    |||||||||||||||| || ||||||||||  | ||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  ||||||     
T  19264104 taaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 19264203  T
Q  215 ttccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |||||| || |||||||||||||||||   ||||  ||| || ||||||||||||||||||||||    
T  19264204 ttccaaagaaaacacaaaaaattatactctaaattcttatgttttagttttcttaataagtgtga 19264268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 35022967 - 35023069
Alignment:
Q  179 aatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 278  Q
    ||||| |||| |||||||||||| | | |||||||| |||||  | |||||||||||||||||  |||||  ||| || |||||||||||||||||||||    
T  35022967 aatgaaaattgtttttacatcttcctatgaaacttactccaaaaa-aacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtg 35023065  T
Q  279 aatt 282  Q
    ||||    
T  35023066 aatt 35023069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 8701668 - 8701770
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||||||||| ||| |||||||||||||| || |||| |||||| ||| |  |||||  ||| || ||||||||||||||||| |    
T  8701668 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacataaaaaactatgctacaaatttttatgttttagttttcttaataagcg 8701767  T
Q  277 tga 279  Q
    |||    
T  8701768 tga 8701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 118 - 279
Target Start/End: Original strand, 12938249 - 12938410
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttcc-acgaaacttatt 216  Q
    |||||||||||||||| ||||||  ||  | ||  ||||||||||||||||||   || ||||||| |||| |||||||| |||||| |  |||||||||    
T  12938249 aaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttaca-ctttcctataaaacttatt 12938347  T
Q  217 ccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
     ||| || | ||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  12938348 tcaaagaaagcacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 12938410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 277
Target Start/End: Complemental strand, 28599303 - 28599142
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||| ||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| ||||||||||||||||| | |  || ||| |    
T  28599303 taaaattaaatgcatattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaatctttt 28599204  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||    
T  28599203 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 28599142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 40808811 - 40808712
Alignment:
Q  179 aatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 278  Q
    ||||| |||| |||||||||||| ||| |||||||||||||| || ||||||||||| ||| |  |||||  ||| |  |||||||||||||||||||||    
T  40808811 aatgaaaattgtttttacatctt-ccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtg 40808713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 20380115 - 20380182
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    ||||||||||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||    
T  20380115 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctcgttttcattttctctataat 20380182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 6110356 - 6110191
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtc-cttttt-attttctccataatttttaaccaatgagaattatttttacatctttccacgaaactt 213  Q
    |||||||||||||||||| ||||||||||  | || || ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  ||||||    
T  6110356 taaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 6110257  T
Q  214 attccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
     |||| | || ||||||||||  |||||  |||||  ||| || ||||||||||||||||||||||    
T  6110256 tttccgaagaaaacacaaaaagctatactccaaattcttatgttttagttttcttaataagtgtga 6110191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 231
Target Start/End: Original strand, 9709501 - 9709633
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| |||||| |||| | |||||||| |||||||||||||||||||||| ||  ||| |||||||| |||||   |||| ||||| |||| |||| |||    
T  9709501 aaattatctttaccaaagaaaaattaa-tgcaaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcaca 9709599  T
Q  198 tctttccacgaaacttattccaaggagaacacaa 231  Q
    |||| | |  |||||| || |||||| |||||||    
T  9709600 tcttcctataaaacttgtttcaaggataacacaa 9709633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 32273666 - 32273795
Alignment:
Q  106 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 205  Q
    |||||||| | ||||||||||| ||| ||||||||||||| | || |||| |||||||| |||||     |||||||| |||| |||||| ||||| | |    
T  32273666 ttttccaaaggaaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttccta 32273765  T
Q  206 cgaaacttattccaaggagaacacaaaaaa 235  Q
      ||||||||| ||| || |||||||||||    
T  32273766 taaaacttatttcaaagataacacaaaaaa 32273795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 33933002 - 33932914
Alignment:
Q  192 tttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
    |||||||||||| |  ||||||| |||||| | || ||||||||||||||  ||||  | || || |||||||||||||||||||||||    
T  33933002 tttacatctttctataaaacttaatccaagaataatacaaaaaattatactacaaaatactatgttttagttttcttaataagtgtgaa 33932914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 44442118 - 44442190
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    |||| |||||||| || | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||    
T  44442118 aaattatcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataat 44442190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 45660370 - 45660536
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| |||| |||||  | ||  ||| |||||||||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  45660370 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 45660469  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatca---ttaagtgttagttttcttaataagtgtga 279  Q
    | ||| || ||||||||||| |||||  ||||| |   ||| || |||||||||||||||| |||||    
T  45660470 ttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttttcttaataaatgtga 45660536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 4707484 - 4707585
Alignment:
Q  174 taaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 273  Q
    |||||||||| |||| |||| ||||||| ||   |||||||||| ||||| ||||||||||| |||||  ||||||||   || ||||| ||||||||||    
T  4707484 taaccaatgaaaattgttttaacatcttcccgttaaacttattctaaggaaaacacaaaaaactatactccaaatcat---gttttagtgttcttaataa 4707580  T
Q  274 gtgtg 278  Q
     ||||    
T  4707581 atgtg 4707585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 6766019 - 6765925
Alignment:
Q  185 aattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |||| |||||||||||| | |  ||| ||||||||| || |||| |||||| ||||| ||||||  ||| || ||| ||||||||||||||||||    
T  6766019 aattgtttttacatcttcctataaaatttattccaatgaaaacataaaaaactatacttcaaatttttatgttttaattttcttaataagtgtga 6765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 792598 - 792565
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  792598 tcatattctttgtctcaaaatataagcaaaaaag 792565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 11825436 - 11825395
Alignment:
Q  190 tttttacatctttccacgaaacttattccaaggagaacacaa 231  Q
    |||||||||||||||| |||||||||||||| || |||||||    
T  11825436 tttttacatctttccatgaaacttattccaaagaaaacacaa 11825395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 43415468 - 43415569
Alignment:
Q  178 caatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    |||||| |||| |||||||||||| | |  |||||| ||  || || ||||||||||||||||| ||||||  |||  | |||||||||||| |||||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttagtaagtgt 43415567  T
Q  278 ga 279  Q
    ||    
T  43415568 ga 43415569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 8032842 - 8032738
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtc-ctttttattttctccataatttttaaccaatgagaattatttttac 196  Q
    |||| ||||||| ||| | ||||||||||||||| ||||||||||||| | || | ||| |||||||| |||| |   ||||||| | |||| |||||||    
T  8032842 aaattatctttttcaaagaaaaattaaatgcaaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttac 8032743  T
Q  197 atctt 201  Q
    |||||    
T  8032742 atctt 8032738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 30830749 - 30830633
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| ||| ||||||  | || |||| |||||||| |||||   |||||||||| | || |||||| |||||  || ||||||||||     
T  30830749 aaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcatgaaacttattt 30830650  T
Q  218 caaggagaacacaaaaa 234  Q
    |||  | ||||||||||    
T  30830649 caaaaaaaacacaaaaa 30830633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 175; Significance: 5e-94; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 3099934 - 3100124
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3099934 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 3100033  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3100034 ttacatctttccatgaaacttattccaacgagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 3100124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 35259974 - 35260228
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| | ||       |||||||||||        ||||||||| |||||||||||||||||||||||||    
T  35259974 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattat-gttttttcaaacaaatcatcttttccaatgtaaaattaaatg 35260072  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35260073 caaattccattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaac 35260172  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35260173 acaaaaaatgatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 35260228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 27621111 - 27621301
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27621111 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 27621210  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  27621211 ttacatctttccatgaaacttattccaagtagaacacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaatta 27621301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 27752567 - 27752757
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27752567 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 27752666  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27752667 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 27752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 31133209 - 31133019
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  31133209 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattttttctcctttttattttctccataatttttaaccaatgagaattattt 31133110  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31133109 ttacatctttccatgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 31133019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 44052602 - 44052792
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44052602 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 44052701  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  44052702 ttacatctttccagaaaacttattccaaggagaacacaaaaaattatacctcaaatcactgagtgttagttttcttaataagtgtgaatta 44052792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 11992709 - 11992899
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  11992709 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttcacctttttcttttctccataatttttaaccaatgagaattattt 11992808  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  11992809 ttacatcttttcatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaattagtgtgaatta 11992899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 11044038 - 11044228
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| || ||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  11044038 caaataaatcatattttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgagaattattt 11044137  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11044138 ttacatctttacatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 11044228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 24612660 - 24612470
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24612660 caaacaaatcatctttttcaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 24612561  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  24612560 ttacatcattccatgaaacttattccaaggagaacataaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaatta 24612470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 44411389 - 44411199
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44411389 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattattt 44411290  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  44411289 ttacatctttccatgaaacttatttcaaggagaatacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaatta 44411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 35344283 - 35344538
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttc-caatgtaaaattaaat 126  Q
    ||||||| |||||||||||||||||||||||||| | ||       |||||||||||        ||||||||| || ||||  ||||||||||||||||    
T  35344283 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattat-gttttttcaaacaaatcattttttttcaatgtaaaattaaat 35344381  T
Q  127 gcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaa 226  Q
    |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  35344382 gcaaattgcattcaatgtattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggagaa 35344481  T
Q  227 cacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35344482 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 35344538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 37598051 - 37598240
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  37598051 caaacaaatcattttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatta-tt 37598149  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  37598150 ttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcagtaagtgttagttttcttaataaccgtgaatta 37598240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 95 - 283
Target Start/End: Original strand, 34713511 - 34713699
Alignment:
Q  95 aacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattttt 194  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34713511 aacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattttt 34713610  T
Q  195 acatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||| |  ||||||||| |||| | |||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  34713611 acatctttctagaaaacttatttcaagaaaaacacaaaaaattatacctcaaatcactaagtattagttttcttaataaatgtgaatta 34713699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 39187214 - 39187401
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  39187214 caaacaaatcatcatttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattattt 39187313  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||||||| ||||||||   |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  39187314 ttacatctttccataaaacttattccaacgagaacac---aaattatacctcaaatcactaagtgttagttttcttaataagcgtgaatta 39187401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 25321766 - 25321576
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||||||| |||| ||||||||    
T  25321766 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgctctcctttttattttctccataatttttaacctatgaaaattattt 25321667  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||  || |||||||||||| |||||||||||||||    
T  25321666 ttacatctttccataaaacttattccaaggagaacacagaaaattatacctcaaatcaccaaatgttagttttctaaataagtgtgaatta 25321576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 36538039 - 36538229
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  36538039 caaacaaatcatcttttccaatgtaaaattaaatgcaatttgcatttaatttattctcctttttattttctccatgatttttaaccaatgagaattattt 36538138  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||| || ||||||| |||||||||| |||||||||| ||| |||||||||||||||||| |||||||||    
T  36538139 ttacatctttccatgaaacttattctaaagagaacataaaaaattattcctcaaatcactaaatgttagttttcttaataaatgtgaatta 36538229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 96 - 255
Target Start/End: Complemental strand, 37567608 - 37567449
Alignment:
Q  96 acaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattttta 195  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||     
T  37567608 acaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaatcaatgagaattatttttc 37567509  T
Q  196 catctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaag 255  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  37567508 catctttccatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaag 37567449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 35346484 - 35346294
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||    
T  35346484 caaacaaatcatctttttcaatgtaaaattgaatgcaaattgcattcaatgtattctcctttttattatctccataatttttaaccaatgagaattattt 35346385  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||| | ||| |||||||||||| |||||||||    
T  35346384 ttacatctttccatgaaatttatttcaaggagaacacaaaaaattatacctcaaatcactaaatattaattttcttaataaatgtgaatta 35346294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 32678689 - 32678508
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  32678689 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttattttctccataatttttaaccaatgagaattattt 32678590  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||         |||| ||||||||||||||||||||||||||||||||    
T  32678589 ttacatctttccatgaaacttattccaagaagaacacaaaaaatt---------atcactaagtgttagttttcttaataagtgtgaatta 32678508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 93 - 248
Target Start/End: Complemental strand, 33851203 - 33851048
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  33851203 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttttcctttttattttctccatgatttttaactaatgagaattattt 33851104  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaat 248  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  33851103 ttacatctttccatgaaacttattccaaagagaacacaaaaaattattcctcaaat 33851048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 93 - 256
Target Start/End: Complemental strand, 44358671 - 44358508
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  44358671 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaattaatgagaattattt 44358572  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagt 256  Q
    |||||| ||| ||  |||||||||| ||||||||||||||||||||||||| |||||| |||||    
T  44358571 ttacatattttcataaaacttattctaaggagaacacaaaaaattatacctaaaatcactaagt 44358508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 93 - 282
Target Start/End: Complemental strand, 2238773 - 2238586
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| ||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||  |||||| ||| ||||||||| | |||| |||    
T  2238773 caaaaaaatcatcttttccaaagtaaaattaaatgcaaatcgcattcaatttgttctcctttctattcactccatgattattaaccaataataattgttt 2238674  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||||||||||||| ||||||||||||||| | |||||  ||||||||||||||||  | || || || ||||||||||||||||||||||    
T  2238673 ttacatctttccatgaaacttattccaagaaaaacac--aaaattatacctcaaactactatgtttttgttttcttaataagtgtgaatt 2238586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 41426325 - 41426470
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||| | |||| ||| ||||    
T  41426325 aaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttatcctttctattatctccataatcattaaccaataataattgtttataca 41426424  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacct 243  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  41426425 tctttccatgaaacttattccaagaagaacacaaaaaattatacct 41426470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 12108151 - 12108326
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||              
T  12108151 caaacaaatcattttttc-aatgtaaaattcaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaatg---------- 12108239  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
        |||||| || |||||||||| ||| || ||||||||||||||||| |||||| | ||| ||||||||||||||||||||| ||||||    
T  12108240 ----atcttttcatgaaacttatttcaaagataacacaaaaaattatacttcaaattactaaatgttagttttcttaataagtgagaatta 12108326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 40486628 - 40486505
Alignment:
Q  137 ttcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaat 236  Q
    |||||||| || | ||||||||||||||| ||||||||||| ||| | ||||||||||||||||||||  ||||||||||| |||||||| |||||||||    
T  40486628 ttcaatttattcttctttttattttctccttaatttttaactaataaaaattatttttacatctttccttgaaacttattctaaggagaatacaaaaaat 40486529  T
Q  237 tatacctcaaatcattaagtgtta 260  Q
    ||||||||||||||||||||||||    
T  40486528 tatacctcaaatcattaagtgtta 40486505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 93 - 282
Target Start/End: Complemental strand, 24510875 - 24510688
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| || |||||||| |||  |||||||||||||||||||||||||||| | ||||||||| | ||||||||  ||||||||| | |||| |||    
T  24510875 caaaaaaatcattttttccaaagtagtattaaatgcaaattgcattcaatttgttctactttttattctatccataatcattaaccaataaaaattgttt 24510776  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||||||||||||| ||||||||||||||  | |||||  ||||||||||||||||  | || || || ||||| ||||||||||||||||    
T  24510775 ttacatctttccatgaaacttattccaataaaaacac--aaaattatacctcaaactactatgtttttgttttattaataagtgtgaatt 24510688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 115 - 248
Target Start/End: Original strand, 16643386 - 16643519
Alignment:
Q  115 gtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaactta 214  Q
    ||||||||||||||||||| ||||||| || || ||||||||||||||||||||||  || ||||||||||| | | ||||||||||||||  |||||||    
T  16643386 gtaaaattaaatgcaaattacattcaagttattttcctttttattttctccataatcattgaccaatgagaaatgtatttacatctttccataaaactta 16643485  T
Q  215 ttccaaggagaacacaaaaaattatacctcaaat 248  Q
    ||||| | |||| ||||||| ||||||| |||||    
T  16643486 ttccaggaagaatacaaaaagttataccccaaat 16643519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 98 - 278
Target Start/End: Original strand, 34899910 - 34900090
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| |||||||| || |||||||||||||| |||| ||||||||||||| | |||| || ||||||||| ||   |||||||| | ||||||||||| |    
T  34899910 aaatcatcttttctaaagtaaaattaaatgctaatttcattcaatttgtttttctttatactttctccatgatcaataaccaatcaaaattatttttaaa 34900009  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 278  Q
    || | | |  |||||||||| |||  |||||||||||| |||| | ||||| |||| || |||||||||||||||||||||    
T  34900010 tcctcctataaaacttattctaagaggaacacaaaaaaatatatcgcaaattattatgttttagttttcttaataagtgtg 34900090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 29920385 - 29920262
Alignment:
Q  156 tattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaag 255  Q
    |||||| ||||||||   || ||||||| |||| |||||||||||| ||| |||||||||||||| || ||||||||||||| ||| ||||||  ||| |    
T  29920385 tattttgtccataatcaatagccaatgaaaattgtttttacatcttcccatgaaacttattccaaagataacacaaaaaattgtacttcaaattcttatg 29920286  T
Q  256 tgttagttttcttaataagtgtga 279  Q
    | ||||||||||||||||||||||    
T  29920285 ttttagttttcttaataagtgtga 29920262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 34890331 - 34890168
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  34890331 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 34890232  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || |||||||||||||||||  |||||  ||| || ||||||||||||||||||||||    
T  34890231 tccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 34890168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 103 - 282
Target Start/End: Original strand, 27740597 - 27740772
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    ||||||||||| || |||||||||| ||||| ||||| ||||| | | |||| |||||||| ||| ||   || ||||| ||||||||||||||||||||    
T  27740597 atcttttccaa-gtcaaattaaatgtaaatttcattcgatttgctcttctttctattttcttcatgatcaatagccaattagaattatttttacatcttt 27740695  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |   ||||||||||| |   | |||||||||||||||| ||||||| | || || ||| |||| ||||||||| ||||||    
T  27740696 cagtgaaacttattcaa---aaaacacaaaaaattatatctcaaattactatgttttaatttttttaataagtatgaatt 27740772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 15824725 - 15824641
Alignment:
Q  185 aattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttctta 269  Q
    |||| |||||||||||||||| ||||||||||| || || ||||||||||| ||||| ||||||  ||| || ||||||||||||    
T  15824725 aattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttctta 15824641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 279
Target Start/End: Original strand, 26483534 - 26483698
Alignment:
Q  115 gtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaactta 214  Q
    ||||||||||||| ||||| ||||||||||  | |   ||| ||||| ||||||||   || ||||||| |||| |||||||||||  | |  ||||||     
T  26483534 gtaaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctataaaacttt 26483633  T
Q  215 ttccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    || ||| || ||||||||||| ||||| ||||||  ||| || ||||||||||||||||||||||    
T  26483634 tttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtga 26483698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 2052958 - 2053029
Alignment:
Q  208 aaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |||||||||| || || ||||||||||||||||| || ||| |||| || ||||||||||||||||||||||    
T  2052958 aaacttattctaaagaaaacacaaaaaattatacttctaattattatgttttagttttcttaataagtgtga 2053029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 277
Target Start/End: Original strand, 6401625 - 6401784
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||| | |||||||||||||| |||| |  | |||| |||||||  ||||||  |||||||||  |||| |||||||||||||  | ||||||||||     
T  6401625 aaattataagcaaattgcattcattttgctaccattttcattttctttataattaataaccaatggaaattgtttttacatctttttaggaaacttattt 6401724  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    |||| | ||||||||||| |||||  ||||| | ||  | |||| |||||||||||||||    
T  6401725 caagaataacacaaaaaactatactacaaattactatattttagatttcttaataagtgt 6401784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 36190775 - 36190938
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  ||||||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  36190775 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 36190874  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || ||||||||||| |||||   ||||  ||| || ||||||||||||| ||||||||    
T  36190875 ttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttttcttaacaagtgtga 36190938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 40487845 - 40487794
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaattt 144  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  40487845 caaacaaatcatcttttccaatgtaaaattcaatgcaagttgcattcaattt 40487794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 25195216 - 25195118
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctt 201  Q
    ||||||||||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  25195216 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatctt 25195118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 5217397 - 5217510
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    ||||||||||||| ||||||||| | || | ||  ||| |||||||| |||| |  |||||||| | |||| |||||||||||||| | ||||||||||     
T  5217397 aaattaaatgcaatttgcattcattatgctttctctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttattt 5217496  T
Q  218 caaggagaacacaa 231  Q
    |||||| |||||||    
T  5217497 caaggataacacaa 5217510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 235
Target Start/End: Complemental strand, 41362482 - 41362345
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| |||||| |||||| |  | |||| |||||||| |||||     |||||||| |||| ||||||||    
T  41362482 aaattatcttttccaaaggaaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttaca 41362383  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    |||| | |  ||||||||| ||| || |||||||||||    
T  41362382 tcttcctataaaacttatttcaaagataacacaaaaaa 41362345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 282
Target Start/End: Complemental strand, 2628339 - 2628155
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||| ||| | |||||| |||||||| || |||||||||| | ||  ||| |||||||| ||||    |||||||||| |||||||||||||    
T  2628339 aaattatctttttcaaaggaaaatttaatgcaaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttaca 2628240  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||| | |  |||||||||  ||||| ||||||| ||| |||    ||||  | || || || ||||||||||||||||||||||    
T  2628239 tcttcctataaaacttattttaaggataacacaagaaactatgttgcaaactactatgttttggttttcttaataagtgtgaatt 2628155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 8709941 - 8709780
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  || ||||||||||||||  | ||  |||||| || | ||||||| |||| ||| || ||||||    
T  8709941 taaaattaaatgcaaattacattcaattttctctc--ttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccatgagacttat 8709844  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || ||||||||||| |||||  |||||  ||| || |||||||| ||| |||||||||    
T  8709843 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagtttttttattaagtgtga 8709780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 7022560 - 7022397
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| ||||||||||| ||||| | |  |||||| |    
T  7022560 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctataaaactttt 7022461  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || ||||||||||| |||||  |||||  ||| || |||||||||||||||| |||||    
T  7022460 ttcaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataaatgtga 7022397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 8673366 - 8673469
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| | ||||||||||| | || |||| |||||||| |||||     |||||||| |||| ||||||||    
T  8673366 aaattatcttttccaaaggaaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttaca 8673465  T
Q  198 tctt 201  Q
    ||||    
T  8673466 tctt 8673469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 17336727 - 17336830
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| |||||||| || | ||||||||||||||| ||||||||||||| | ||||||| |||| ||| |||||     |||||||| |||| ||||||||    
T  17336727 aaattatcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttaca 17336826  T
Q  198 tctt 201  Q
    ||||    
T  17336827 tctt 17336830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 43216504 - 43216341
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| |||| |||||  | ||  ||| |||||||||||||    ||   ||||| |||| |||||||||||| | |  |||||| |    
T  43216504 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctataaaactttt 43216405  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  43216404 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 43216341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 248
Target Start/End: Original strand, 13143767 - 13143899
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| |||||||||| || ||  ||| |||||  ||| ||     | ||||||| |||| |||||||||||| | | ||||||| |    
T  13143767 taaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcctatgaaactttt 13143866  T
Q  216 tccaaggagaacacaaaaaattatacctcaaat 248  Q
    | ||| || ||||||||||||||||| ||||||    
T  13143867 ttcaacgaaaacacaaaaaattatacttcaaat 13143899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 231
Target Start/End: Original strand, 17713205 - 17713341
Alignment:
Q  95 aacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattttt 194  Q
    ||||||| ||||||||||| | ||||||||||||||| |||||||||| || | ||  ||  ||||| || ||||    |||||||||| |||| |||||    
T  17713205 aacaaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgttttt 17713304  T
Q  195 acatctttccacgaaacttattccaaggagaacacaa 231  Q
    | ||||| | |  ||||||||| |||||| |||||||    
T  17713305 aaatcttcctataaaacttatttcaaggataacacaa 17713341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 41791635 - 41791563
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    |||| |||||||||||   ||||||||||| ||| ||||||||||||| | || ||||||||||||| |||||    
T  41791635 aaatcatcttttccaaaagaaaattaaatgtaaaatgcattcaatttgctctcttttttattttctctataat 41791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 16635429 - 16635488
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtccttttta 157  Q
    |||| |||||||| || |||||||| ||| |||||||||||||| ||||| |||||||||    
T  16635429 aaatcatcttttcaaaagtaaaatttaattcaaattgcattcaagttgttttccttttta 16635488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 16635697 - 16635756
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtccttttta 157  Q
    |||| |||||||| || |||||||| ||| |||||||||||||| ||||| |||||||||    
T  16635697 aaatcatcttttcaaaagtaaaatttaattcaaattgcattcaagttgttttccttttta 16635756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 35456181 - 35456094
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttc 203  Q
    |||||||||||| ||||| |||||| |||  | ||  ||||||||| |||||||||  || ||||||| |||| ||||||||||||||    
T  35456181 taaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttc 35456094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 17314834 - 17314887
Alignment:
Q  117 aaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    |||||||||| |||| ||||||||||||| | ||||||| |||||||| |||||    
T  17314834 aaaattaaatccaaagtgcattcaatttgctctccttttcattttctctataat 17314887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 37597987 - 37598020
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  37597987 tcatattctttgtctcaaaatataagcaaaaaag 37598020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 174; Significance: 2e-93; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 28 - 283
Target Start/End: Complemental strand, 43108107 - 43107852
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| | ||       | |||||||||        ||||||||| |||||||||||||||||||||||||    
T  43108107 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaatg 43108008  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43108007 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaac 43107908  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  43107907 acaaaaaattatacctcaaatcactaagtgttagttttcttaataaatgtgaatta 43107852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 29 - 283
Target Start/End: Original strand, 23106366 - 23106620
Alignment:
Q  29 catattatttgtctcaaaatataagcaaaaaagg-ctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    |||||||||||||||||||||||||||||||| | ||||       |||||||||||        ||||||||| |||||||||||||||||||||||||    
T  23106366 catattatttgtctcaaaatataagcaaaaaaagactaacttttatgctattattat-gttttttcaaacaaatcatcttttccaatgtaaaattaaatg 23106464  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  23106465 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattttaaggagaac 23106564  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23106565 acaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 23106620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 35181169 - 35181359
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  35181169 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattattt 35181268  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35181269 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcagtaagtgttagttttcttaataagtgtgaatta 35181359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 283
Target Start/End: Original strand, 3157358 - 3157603
Alignment:
Q  37 ttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatgcaaattgca 136  Q
    ||||||||||||||||||||||||| ||||       |||||||||||        ||||||||| |||||||||||||||||||||||||||| |||||    
T  3157358 ttgtctcaaaatataagcaaaaaagactaacttttatgctattattat-gtattttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgca 3157456  T
Q  137 ttcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaat 236  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  3157457 ttcaatttgttttcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaagagaacacaaaaaat 3157556  T
Q  237 tatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||    
T  3157557 tatacctcaaatcactaagtgttagttttcttaataagtatgaatta 3157603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 19933192 - 19933002
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  19933192 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattattt 19933093  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  19933092 ttacatctttccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 19933002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 42617648 - 42617838
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  42617648 caaacaaattatttttttcaatgtaaaattaaatgcaaattgcattcaatttgtgctcctttttattttctccataatttttaaccaattagaattattt 42617747  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42617748 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagtttttttaataagtgtgaatta 42617838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 36 - 284
Target Start/End: Original strand, 45598825 - 45599073
Alignment:
Q  36 tttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatgcaaattgc 135  Q
    |||||||||||||||||||||||||| ||||       |||||||||||        ||||||||| |||||||||||||||||||||||||||||||||    
T  45598825 tttgtctcaaaatataagcaaaaaagactaatttttatgctattattat-gttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgc 45598923  T
Q  136 attcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacac-aaaaa 234  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || || |||||    
T  45598924 attcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggaaaatacaaaaaa 45599023  T
Q  235 attatacctcaaatcattaagtgttagttttcttaataagtgtgaattac 284  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  45599024 attatacctcaaatcactaagtgttagttttcttaataagtgcgaattac 45599073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 22111467 - 22111277
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  22111467 caaacaaatcatatttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattattt 22111368  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22111367 ttacatctttccagaaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 22111277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 40583122 - 40583312
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  40583122 caaacaaatcatatttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattattt 40583221  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40583222 ttacatctttccagaaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 40583312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 41889148 - 41889338
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41889148 caaacaaatcatcttttccaatgtaaaattcaaagcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 41889247  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  41889248 ttacatctttccatgaaacttatttcaaggagaatacaaaaaattatacatcaaatcactaagtgttagttttcttaataagtgtgaatta 41889338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 48879365 - 48879555
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48879365 caaaaaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 48879464  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||| |  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48879465 ttacatctttctataaaacttattccaaggagaatacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtaaatta 48879555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 47383383 - 47383572
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  47383383 caaacaaatcatcttttccaatgtaaaattaaatgtaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattattt 47383482  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  47383483 ttacatctttccatgaaacttattttaaggagaacacaaaaaattatatctcaaatcattaagtgttagttttcttaatatgtgtgaatt 47383572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 18206456 - 18206266
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||| ||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  18206456 caaacaaatcatctttttcaatgtaaaattaaatgcaagttgtatttaatttgttctcctttttattttttccataatttttaaccaatgagaattattt 18206357  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  18206356 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaatta 18206266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 41815830 - 41815640
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| || |||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41815830 caaataaatcatattttccaatgtaaaattaaatgtaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 41815731  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  41815730 ttacatctttccataaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtcaatta 41815640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 7989432 - 7989255
Alignment:
Q  106 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 205  Q
    |||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7989432 tttttcaatgtaaaattaaatgcaagttgcattcaatttgttatcctttttattttcttcataatttttaaccaatgagaattatttttacatctttcca 7989333  T
Q  206 cgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
     |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7989332 tgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 7989255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 93 - 273
Target Start/End: Complemental strand, 19964331 - 19964151
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  19964331 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattattt 19964232  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 273  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  19964231 ttacatctttccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataa 19964151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 21654258 - 21654068
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  21654258 caaacaaatcaccttttccaatgtaaaattaaatgcaaattacattcaatttgttctccttttcattttctccataatttttaaccaatgagaattattt 21654159  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||| ||||| ||||||||||||||||||||||||||    
T  21654158 ttacatctttccatgaaacttattccaaggagaacacaaaaaatgatatctcaagtcactaagtattagttttcttaataagtgtgaatta 21654068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 40560359 - 40560549
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  40560359 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattattt 40560458  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||| |  ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  40560459 ttacatctttctataaaacttatttcaaggagaacacaaaaaattatacctcaaattattaagtgttagtttttttaataagtgtaaatta 40560549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 93 - 281
Target Start/End: Original strand, 34808196 - 34808384
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  34808196 caaacaaatcatctttttcaacgtaaaattaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaataagaattattt 34808295  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaat 281  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  34808296 ttacatctttccatgaaactttttccaagaagaacacaaaaaattatacctcaaatcactaagtattagttttcttactaagtgtgaat 34808384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 36576395 - 36576583
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  36576395 caaataaatcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgaaaattattt 36576494  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  36576495 ttacatctttccatgaaacttattctaaggagaa-acaaaaaattatacctcaaatcactaagtgttagttttctt-ataagtgtgaatta 36576583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 32491244 - 32491054
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  32491244 caaacaaatcatcttttcgaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttgttttctccataatttttaaccaatgaaaattattt 32491145  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||    
T  32491144 ttacatctttccatgaaacttattataaggagaacacaaaaaattatacatcaaatcaccaagtgttagttttcttaataaatgtgaatta 32491054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 44600423 - 44600613
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| |||||||||| ||||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||||||||||||| ||||||||    
T  44600423 caaataaatcatcttttccagtgtaaaattaaatgcaagttgcattcaatttgttctcttttttgttttctccataatttttaaccaatgaaaattattt 44600522  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  44600523 ttacatctttccttgaaacttattctaaggagaacacaaaaaattatacctcaaatcgctaagtgttagttttcttaataaatgtgaatta 44600613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 23731537 - 23731729
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  23731537 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaatcaacgagaattattt 23731636  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgt--tagttttcttaataagtgtgaatta 283  Q
    |||||||| |||| |||||||||||||||||||||||||||||| |||| |||||||| |||||||  ||||||||||||||| |||||||||    
T  23731637 ttacatctctccatgaaacttattccaaggagaacacaaaaaatcatacatcaaatcactaagtgttatagttttcttaataaatgtgaatta 23731729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 93 - 282
Target Start/End: Complemental strand, 48938026 - 48937838
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  48938026 caaacaaatcatcttttccaatgtaaaattaaatacaaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattattt 48937927  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||| || || |||||||  ||||||||||||||| ||||||    
T  48937926 ttacatctttccataaaacttattccaaggagaacacaaaaaattatacctc-aaccactaagtgtatgttttcttaataagtatgaatt 48937838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 41890379 - 41890190
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||  |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||||    
T  41890379 caaacaaatcatcttttttaatgtaaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaattaatgagaattattt 41890280  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||| ||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  41890279 tta-atctttccatgaaacttatttcaaggagaacacaaaaaattataccccaaatcattaaatgttagttttcttaataagtttgaatta 41890190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 9818456 - 9818635
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||| |           |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9818456 caaacaaatcatcttttccaatgtaaaattaaatgcca-----------tttgttctcctttttattttctccataatttttaaccaatgagaattattt 9818544  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  9818545 ttacatctttccataaaacttattccaaggagaacataaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaatta 9818635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 10720381 - 10720560
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||| |           |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10720381 caaacaaatcatcttttccaatgtaaaattaaatgcca-----------tttgttctcctttttattttctccataatttttaaccaatgagaattattt 10720469  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  10720470 ttacatctttccataaaacttattccaaggagaacataaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaatta 10720560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 33153016 - 33153205
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||| |||||| |||    
T  33153016 caaaaaaattatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattgttt 33153115  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||||||||||||  ||| ||||| |||| ||||||||||||||||||| |||||  |||| || || ||||| ||||||||||||||||    
T  33153116 ttacatctttccataaaatttatttcaagaagaacacaaaaaattatacttcaaactattatgtttttgtttttttaataagtgtgaatt 33153205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 48943052 - 48942942
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  48943052 caaacaaatcatcttttccaatgtaaaattaaatacaaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattattt 48942953  T
Q  193 ttacatctttc 203  Q
    |||||||||||    
T  48942952 ttacatctttc 48942942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 98 - 282
Target Start/End: Complemental strand, 35084233 - 35084049
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||| ||||||| |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||  ||| ||||| |||||| ||||||||    
T  35084233 aaatcatcctttccaaagtaaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattgtttttaca 35084134  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||||  | |||||||||| |||| ||||||||||||| |||| ||||||| | |  || |||||||||||| ||||||||||||    
T  35084133 tctttttatgaaacttatttcaagaagaacacaaaaaactataactcaaattactgtgttttagttttcttattaagtgtgaatt 35084049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 30082330 - 30082517
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||| || || ||| |||| ||||||||||  ||||||||| |||||| |||    
T  30082330 caaaaaaatcatcttttccaaagtaaaattaaatgcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaattgttt 30082429  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||||||||| ||  ||||||||| |||| | |||||  ||||||||||||||||  | || || || ||||||||||||||||||||||    
T  30082430 ttacatcttttcagaaaacttatttcaagaataacac--aaaattatacctcaaactactatgtttttgttttcttaataagtgtgaatt 30082517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 106 - 282
Target Start/End: Original strand, 28608363 - 28608539
Alignment:
Q  106 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 205  Q
    |||||||| ||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||  || |||||| |||||| ||||||||||||| ||    
T  28608363 ttttccaaagtaaaattaaatgcaaattgcattcaatttgttctcttttctattctctccataataattgaccaataagaattgtttttacatcttttca 28608462  T
Q  206 cgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
     |||||||||| |||| ||| || |||||||||||| || ||  | || || || |||||||||| || ||||||||    
T  28608463 tgaaacttatttcaagaagaccataaaaaattatacttctaactactatgtttttgttttcttaaaaaatgtgaatt 28608539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 247
Target Start/End: Complemental strand, 29236204 - 29236051
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| ||||||| | | ||||||||||||  |||||||||||||||| || ||||||||||| ||||||||||  ||||||||| | |||| |||    
T  29236204 caaaaaaatcatcttttacgaagtaaaattaaatataaattgcattcaattt-ttctcctttttattctctccataatcattaaccaataaaaattgttt 29236106  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaa 247  Q
    ||| || |||| | ||||||||||||||  |||| ||||||||||||||||||||    
T  29236105 ttatatatttctatgaaacttattccaaaaagaatacaaaaaattatacctcaaa 29236051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 39348774 - 39348843
Alignment:
Q  101 taatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||    
T  39348774 taatcttttccaaagtaaaattaaatgcaaattgtattcaatttgttctcctttctattttctcgataat 39348843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 48339389 - 48339245
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    |||||||||||  |||||||||||||||| |||||| ||||| || | |||| |||||||||||||||   | ||  || ||||||| |||||||| |||    
T  48339389 atcttttccaaactaaaattaaatgcaaactgcatttaatttattcttctttctattttctccataatcaatcacagataagaattacttttacattttt 48339290  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaattatacctcaaa 247  Q
     || ||||||||||||||  |||||||  |||| |||||||||||    
T  48339289 tcaagaaacttattccaataagaacacgcaaaactatacctcaaa 48339245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 45485960 - 45486123
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| ||||||||||||||||| | |  |||||| |    
T  45485960 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttt 45486059  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  45486060 tccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 45486123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 38260303 - 38260445
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| |||||||||||   ||||||||||||||| |||||| |||||| | ||  ||| |||||||| |||||   |||||||||| |||||||||||||    
T  38260303 aaattatcttttccaaatgaaaattaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttaca 38260402  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattata 240  Q
     ||||| |  ||||||||| |||| | ||||||||||| ||||    
T  38260403 actttctataaaacttatttcaagaataacacaaaaaactata 38260445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 39337512 - 39337584
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    |||| |||||||||||  ||||| |||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  39337512 aaatcatcttttccaaattaaaactaaatgcaaattgcattcaaattgttctcctttctattttctccataat 39337584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 25737782 - 25737619
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  25737782 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 25737683  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || |||||| |||| |||||| |||||  ||| || ||||||||||||||||||||||    
T  25737682 tccaaagaaaacacacaaaactataccccaaatttttatgttttagttttcttaataagtgtga 25737619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 282
Target Start/End: Original strand, 40593822 - 40593984
Alignment:
Q  120 attaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattcca 219  Q
    |||||||| |||||||||| ||||| || | ||||||||| | ||| ||||  ||||||||| |||||| |||||||||||||  | ||||| ||||| |    
T  40593822 attaaatgtaaattgcatttaatttattctactttttattctatccgtaatcattaaccaataagaattgtttttacatctttttatgaaacatattcta 40593921  T
Q  220 aggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |  | || ||||||||||||| |||||| ||  | || ||  |||||||||||| ||||||||    
T  40593922 ataaaaatacaaaaaattatatctcaaaccaccatgttttttttttcttaataaatgtgaatt 40593984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 277
Target Start/End: Original strand, 25944581 - 25944742
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  ||||||||| |||||||    |  ||||||| |||| |||||||||||| | |  |||||| |    
T  25944581 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 25944680  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    ||||| || |||||||||| ||||||  |||||  |||  | ||||||||||||||||||||    
T  25944681 tccaaagaaaacacaaaaacttatactccaaattcttatattttagttttcttaataagtgt 25944742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 35888142 - 35888001
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||| ||||||||| ||||||||||||| | || ||||||||||||| |||||     || ||||| |||| ||||||||    
T  35888142 aaattatcttttccaaaggaaaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttaca 35888043  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattat 239  Q
    |||| | |  ||| ||||| ||| || |||||||||||||||    
T  35888042 tcttcctataaaagttatttcaaagataacacaaaaaattat 35888001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 4910788 - 4910627
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  ||| ||||| ||||||||   || ||||||| ||||||||||||||||| | |  |||||| |    
T  4910788 taaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctataaaactttt 4910689  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    || || || ||||||||||  ||||| ||||||  ||| || |||||||| | |||||||||||    
T  4910688 tctaaagaaaacacaaaaa--tatacttcaaattcttatgttttagttttttaaataagtgtga 4910627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 98 - 282
Target Start/End: Complemental strand, 18800906 - 18800715
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat--tt-----ttaaccaatgagaattat 190  Q
    |||| ||||||| ||| ||||||||||||| ||||||||||||||||| | |  ||| ||||  |||||||||  ||     ||||||||| |||||| |    
T  18800906 aaatcatctttttcaaagtaaaattaaatgtaaattgcattcaatttgctcttatttctattccctccataatcattaatcattaaccaataagaattgt 18800807  T
Q  191 ttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||||||||||||||| |||| |||||| ||| | || |||||| |||||  ||||||  | ||  | ||  |||||||||||||||||||||    
T  18800806 ttttacatctttccatgaaatttattctaagaaaaatacaaaatattatgtctcaaactactatatttttattttcttaataagtgtgaatt 18800715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 31769130 - 31768998
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    ||||||||||| | ||||||||||||||| ||||||||||||| | || ||||||||||||| |||||     | |||||| |||| ||||||||||||     
T  31769130 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctcatttttattttctctataatcaactatcaatgaaaattgtttttacatcttc 31769031  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaa 235  Q
    | |  ||||||||| ||| ||  ||||||||||    
T  31769030 ctataaaacttatttcaaagatgacacaaaaaa 31768998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 18102535 - 18102698
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||    ||  ||| ||||| |||||||    |  ||||||| |||| |||||||||||| | |  |||||| |    
T  18102535 taaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 18102634  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || |||||||||||||||||  |||||  ||| || ||||||||||||||||||||||    
T  18102635 ttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 18102698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 35923257 - 35923419
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||||| |  |||||| |    
T  35923257 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 35923356  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||| ||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  35923357 tccaaagaaaacac-aaaaactatactccaaatttttatgttttagttttcttaataagtgtga 35923419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 47779670 - 47779772
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||||||||| ||| ||||||||||| || || ||||||||||| ||| |  |||||  ||| |  |||||||||||||||||||    
T  47779670 ccaatgaaaattgtttttacatcttcccatgaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtg 47779769  T
Q  277 tga 279  Q
    |||    
T  47779770 tga 47779772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 279
Target Start/End: Complemental strand, 19912922 - 19912761
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    |||||||||| |||| ||||||||| || | |  |||||| |||    
T  19912922 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttttacattttactataaaactttttc 19912823  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||| || ||||||||||| |||||  |||||  ||| || |||||||||||||||| |||||    
T  19912822 caaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 19912761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 16917539 - 16917639
Alignment:
Q  179 aatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 278  Q
    ||||| |||| |||||||||||| ||| |||||||||||||| || || ||||||  |||||  ||||||  ||| || ||| |||||||||||||||||    
T  16917539 aatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaaaacaaaatgttatatttcaaatttttatgttttaattttcttaataagtgtg 16917638  T
Q  279 a 279  Q
    |    
T  16917639 a 16917639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 6191050 - 6191213
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||| ||||| |||| |||||  | ||  ||| |||||||||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  6191050 taaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 6191149  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |  || || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  6191150 ttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 6191213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 46760412 - 46760249
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| |||||||| |  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  46760412 taaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 46760313  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  46760312 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 46760249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 2633389 - 2633326
Alignment:
Q  219 aaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||||||||||| |||| || ||||| |||| |||| || |||||||||||||||| ||||||||    
T  2633389 aaggagaacaccaaaagttttacctaaaattattatgttttagttttcttaataaatgtgaatt 2633326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 10248589 - 10248648
Alignment:
Q  172 tttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaa 231  Q
    |||||||||||| |||| |||||||||||||| |  ||||||||| |||||| |||||||    
T  10248589 tttaaccaatgaaaattgtttttacatctttctataaaacttatttcaaggataacacaa 10248648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 15995782 - 15995824
Alignment:
Q  174 taaccaatgagaattatttttacatctttccacgaaacttatt 216  Q
    |||||||||  ||||||||||||||||||||| ||||||||||    
T  15995782 taaccaatggaaattatttttacatctttccatgaaacttatt 15995824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 22632155 - 22632257
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||||||||| ||| |||||||||| ||| || ||||||||||  ||| |  ||||   ||| |  |||||||||||||||||||    
T  22632155 ccaatgaaaattgtttttacatcttcccatgaaacttatttcaaagaaaacacaaaaatctatgctacaaacttttatgctttagttttcttaataagtg 22632254  T
Q  277 tga 279  Q
    |||    
T  22632255 tga 22632257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 28941319 - 28941277
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttg 145  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  28941319 atcttttccaaagtgaaattaaatgcaaattgcattaaatttg 28941277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 39170540 - 39170654
Alignment:
Q  117 aaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttatt 216  Q
    ||||||||||||||| ||||||||||||| | ||  ||| |||||||| |||||   | || ||||| |||| ||||||||||||   |  |||||||||    
T  39170540 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaacttatt 39170639  T
Q  217 ccaaggagaacacaa 231  Q
     |||||| |||||||    
T  39170640 tcaaggataacacaa 39170654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 29713235 - 29713360
Alignment:
Q  157 attttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagt 256  Q
    |||||||| ||||||  || ||||||| |||| |||||||| ||||| | |||| |||||| || ||  |||||| ||| |||||  ||||  || | ||    
T  29713235 attttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttattctaaagatgacacaagaaactatactacaaacaatgatgt 29713334  T
Q  257 gttagttttcttaataagtgtgaatt 282  Q
     |||||||||||||||| ||||||||    
T  29713335 cttagttttcttaataaatgtgaatt 29713360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 41890461 - 41890428
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  41890461 tcatattctttgtctcaaaatataagcaaaaaag 41890428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 14574638 - 14574730
Alignment:
Q  185 aattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    ||||||||||||||||| ||| ||||||||||   | || ||||||||||| |||||  |||||  |||  | || |||||||||||||||||    
T  14574638 aattatttttacatcttcccatgaaacttattatcaagaaaacacaaaaaactatactccaaattcttatattttggttttcttaataagtgt 14574730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 41889084 - 41889116
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaa 60  Q
    ||||||| |||||||||||||||||||||||||    
T  41889084 tcatattctttgtctcaaaatataagcaaaaaa 41889116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 3e-92; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 26 - 283
Target Start/End: Original strand, 55400651 - 55400907
Alignment:
Q  26 tttcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaa 125  Q
    ||||||||| |||||||||||||||||||||||||| || |       |||||||||||        ||||||||| |||||||||||||||||||||||    
T  55400651 tttcatattctttgtctcaaaatataagcaaaaaagacttacttttatgctattattat-gttttttcaaacaaatcatcttttccaatgtaaaattaaa 55400749  T
Q  126 tgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggaga 225  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  55400750 tgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaagaga 55400849  T
Q  226 acacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  55400850 acacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 55400907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 21654159 - 21654414
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| | ||       | |||||||||        ||||||||| |||||||||||||||||||||||||    
T  21654159 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaatg 21654258  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  21654259 caaattgcattcaatttgttctcctttttattttctccataatttttaacaaatgaaaattatttttacatctttccatgaaacttatttcaaggagaac 21654358  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21654359 acaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 21654414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 26641253 - 26641063
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26641253 caaacaaatcatctttttcaaggtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 26641154  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    || |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  26641153 ttgcatctttccatgaaacttattccaaggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaatta 26641063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 31126191 - 31126381
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  31126191 caaacaaatcattttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattattt 31126290  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31126291 ttacatctttccataaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 31126381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 46580515 - 46580704
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  46580515 caaacaaatcatattttacaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaatcaatgagaattattt 46580614  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46580615 ttacatctttccatg-aacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 46580704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 53020162 - 53020352
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  53020162 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaactaatgagaattattt 53020261  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  53020262 ttacatctttccataaaacttattccaagaagaacacaaaaaattataactcaaatcactaaatgttagttttcttaataagtgtgaatta 53020352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 28793140 - 28793331
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaa-ttaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatt 191  Q
    ||||||||| |||||||| ||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28793140 caaacaaatcatcttttctaatgtaaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 28793239  T
Q  192 tttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28793240 tttacatctttccatgaaatttattccaaggataacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 28793331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 37324225 - 37324034
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  37324225 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgtttccctttttattttctccataatttttaaccaatgagaattattt 37324126  T
Q  193 ttacatctttccacg-aaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| | ||||||||| ||| || |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  37324125 ttacatctttccatgaaaacttatttcaaagataacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaatta 37324034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 46296218 - 46296027
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46296218 caaacaaatcatcttttccgatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 46296119  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaa-aaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  46296118 ttacatctttccatgaaacttattccaaggagaacacaaaaaaattatacctcaaatcactaaccgttagttttcttaataagtgtgaatta 46296027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 32322380 - 32322190
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||| ||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  32322380 caaacaaattatctttttcaatgtaaaattaaatacaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattattt 32322281  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  32322280 ttgcatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaatta 32322190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 49068030 - 49068220
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49068030 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattattt 49068129  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||   ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  49068130 ttacatctttccatgaaacttatttataggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataaatgtgaatta 49068220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 1335089 - 1335279
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||    
T  1335089 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaataaaaattattt 1335188  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||| |||||| || ||||| ||||||||||||||||||||||||||    
T  1335189 ttacatctttccatgaaacttattccaaggagaacacaaaaaataatatctcaaaacactaagtattagttttcttaataagtgtgaatta 1335279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 43575936 - 43576126
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||    
T  43575936 caaacaaatcatcttttctaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgataattattt 43576035  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||    
T  43576036 ttacatctttccatgaaacttattcgaaggagaacacaaaaaatcatacctcaaatcactaagtgttaattttcttaataagtatgaatta 43576126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 51426598 - 51426788
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  51426598 caaacaaatcatcttttctaatgtaaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattattt 51426697  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||| |||||| ||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||| || |||||    
T  51426698 ttacatctttccatgaaatttattctaagaagaacacaaaaaattatacctcaaatcactaaatgttagtttttttaataagcgtaaatta 51426788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 93 - 270
Target Start/End: Original strand, 52252015 - 52252192
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| || |||| |||||||| || ||||||||||||||||||||||||| ||||||||||||| |    
T  52252015 caaacaaatcatcttttccaatgtaaaattaaatgcaagttacatttaatttgttctcttttttattttctccataatttttaatcaatgagaattatat 52252114  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaa 270  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  52252115 ttacatctttccatgaaacttattccaagaagaacacaaaaaattatacttcaaatcactaagtgttagttttcttaa 52252192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 93 - 266
Target Start/End: Original strand, 45781376 - 45781549
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||    
T  45781376 caaacaaatcatcttttccaatgtaaaattaaattcaagttgcatttaatttgttctcatttttatcttctccataatttttaaccaatgagaattattt 45781475  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttc 266  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||    
T  45781476 ttacatctttccatgaaacttattctaaagagaacacaaaaaattatacatcaaatcactaagtgttagttttc 45781549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 36 - 283
Target Start/End: Complemental strand, 16739352 - 16739116
Alignment:
Q  36 tttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatgcaaattgc 135  Q
    |||||||||||||||||||||||||| | ||       ||||||||||||       ||||||||| ||||||||||||||||||||||||     ||||    
T  16739352 tttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatatttttt-caaacaaatcatcttttccaatgtaaaattaaat-----ttgc 16739259  T
Q  136 attcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||    
T  16739258 atttaatttgttttcctttttattttctccataatttttaaccaatgagaattatttttatatctttccatgaaacttattccaaggagaacacaacaaa 16739159  T
Q  236 ttatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||     | ||||||||||||||||||||||||||||    
T  16739158 ttatacctcaaat-----aatgttagttttcttaataagtgtgaatta 16739116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 132 - 283
Target Start/End: Complemental strand, 45347815 - 45347664
Alignment:
Q  132 ttgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaa 231  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45347815 ttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaa 45347716  T
Q  232 aaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||| ||||||||||||| |||||||||||||||||||||| | |||||||    
T  45347715 aaaatcatacctcaaatcactaagtgttagttttcttaataaatatgaatta 45347664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 51255165 - 51255355
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  51255165 caaacaaatcatcttttccaatctaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaactaatgagaattattt 51255264  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||| |||||| |||||||||| | |||||||||||||||||||||| ||| || | || ||||||||||||||||||| | |||||||    
T  51255265 ttacatatttccatgaaacttatttctaggagaacacaaaaaattatacttcatattactacgtgttagttttcttaataaatatgaatta 51255355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 34022625 - 34022768
Alignment:
Q  140 aatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattat 239  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  34022625 aatttgttctcctttttattttctctataatttttaaccaatgagaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattat 34022724  T
Q  240 acctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  34022725 acctcaaatcactaagtattagttttcttaataagtgtgaatta 34022768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 93 - 233
Target Start/End: Original strand, 23513546 - 23513686
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  23513546 caaacaaaacatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattattt 23513645  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaa 233  Q
    ||||||||||||| |||||||||| ||| ||||||||||||    
T  23513646 ttacatctttccatgaaacttatttcaaagagaacacaaaa 23513686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 104 - 282
Target Start/End: Complemental strand, 36189136 - 36188958
Alignment:
Q  104 tcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttc 203  Q
    |||||||||| |||||||||||||||||||||||||||||||||  |||||||||||| | || |||  ||||||||||||||||  |||||| ||||||    
T  36189136 tcttttccaaagtaaaattaaatgcaaattgcattcaatttgttcacctttttattttattcacaatcattaaccaatgagaattggttttacttctttc 36189037  T
Q  204 cacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    || |||||||||| ||||||||| |||||||| |||||||||||| | |  || |||| ||||||||||||||||||||    
T  36189036 catgaaacttatttcaaggagaatacaaaaaactatacctcaaattactgtgttttagatttcttaataagtgtgaatt 36188958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 98 - 282
Target Start/End: Original strand, 51309397 - 51309581
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||  ||||| |||| ||||||||||  ||||||||| |||||| ||| ||||    
T  51309397 aaataatcttttctaaattaaaattaaatgcaaattgcattcaatttgttcccctttctattctctccataatcattaaccaataagaattgtttataca 51309496  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||||  | || || ||  |||||||||||| ||||||||    
T  51309497 tctttctatgaaacttattccaagaagaacacaaaaaattatacctcaaactactatgtttttattttcttaataaatgtgaatt 51309581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 94 - 283
Target Start/End: Original strand, 46820029 - 46820203
Alignment:
Q  94 aaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttt 193  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||               |||||||||     
T  46820029 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccata---------------gaattattta 46820113  T
Q  194 tacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||| |||| ||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  46820114 tacatctttccatgaaatttattccgagaagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataaatgtgaatta 46820203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 52172151 - 52172028
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  52172151 caaacaaatcatctttttcaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaatcattt 52172052  T
Q  193 ttacatctttccacgaaacttatt 216  Q
    |||||||||| ||  |||||||||    
T  52172051 ttacatcttttcataaaacttatt 52172028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 13541258 - 13541343
Alignment:
Q  95 aacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaa 180  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  13541258 aacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttttcctttttattttctctataatttttaaccaa 13541343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 149 - 282
Target Start/End: Original strand, 30612213 - 30612346
Alignment:
Q  149 tcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaat 248  Q
    ||||||||||||| ||||||||  |||||||||||||||| |||||||||||||| | |||||| |||  || ||||||| ||||||||||| || ||||    
T  30612213 tcctttttattttttccataatcattaaccaatgagaattgtttttacatctttctatgaaactcattttaaagagaacataaaaaattatatcttaaat 30612312  T
Q  249 cattaagtgttagttttcttaataagtgtgaatt 282  Q
     | ||  | || ||||||||||||||||||||||    
T  30612313 tactatatttttgttttcttaataagtgtgaatt 30612346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 118 - 282
Target Start/End: Complemental strand, 26725104 - 26724940
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||| ||||||||| |||||| |||  | ||  || |||||||||||||||   |||||||||| |||| ||||||||||||  ||  ||||||||||    
T  26725104 aaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctcagaaaacttattc 26725005  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||| || ||||||||||||||||| ||||||  |||  | |||||||||||||||||| ||||||    
T  26725004 caaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttaataagtatgaatt 26724940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 118 - 274
Target Start/End: Original strand, 34105541 - 34105697
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||| |||||||||| |||||||| | |||| |||| ||| ||||||  ||||||||| |||||| ||||||||||||||||  |||||||||     
T  34105541 aaattaaatgtaaattgcattgaatttgttctgctttctattctcttcataatcattaaccaataagaattgtttttacatctttccataaaacttatta 34105640  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataag 274  Q
    |||| | || |||||||| ||||||| |||  | || || || ||||||||||||||    
T  34105641 caagaataaaacaaaaaactataccttaaactactatgtttttgttttcttaataag 34105697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 279
Target Start/End: Complemental strand, 8097143 - 8096970
Alignment:
Q  106 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 205  Q
    |||||||| | ||||||||||||||| ||||||||||||| | ||  ||| |||||||| ||||    |||||||||| ||||||||||||||||| | |    
T  8097143 ttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttccta 8097044  T
Q  206 cgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
      ||||||||| |||||| ||||||| ||| |||    ||||  | || || ||||||||||||||||||||||    
T  8097043 taaaacttatttcaaggataacacaagaaactatgttgcaaactactatgttttagttttcttaataagtgtga 8096970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 37042532 - 37042369
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| ||||||||   || ||||||| |||| |||||||||||| | |  |||||| |    
T  37042532 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttt 37042433  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  37042432 tccaacgaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 37042369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 50651152 - 50650989
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  |||||||||||||||||    ||  |||||| |||| |||||||||||| | |  |||||| |    
T  50651152 taaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttt 50651053  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || ||||||||||| ||||  ||||||  ||| || ||||||||||||||||||||||    
T  50651052 tgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttttcttaataagtgtga 50650989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 275
Target Start/End: Complemental strand, 7886750 - 7886573
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||| ||||||||| ||||||||||||| | ||  ||| |||||||| |||| |  |||||||||| |||| ||||||||    
T  7886750 aaatcatcttttccaaagaaaaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttaca 7886651  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagt 275  Q
    |||||| |  ||| ||||| |||| | ||||||| ||| |||  | ||||  | || || ||||||||||||||||||    
T  7886650 tctttctataaaatttatttcaagaataacacaagaaactatgtcacaaactactatgttttagttttcttaataagt 7886573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 21214231 - 21214363
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    |||||||||||   ||||||||||||||| ||||||||||||| | || ||||||||||||| |||||     |||||||| |||| |||||||||||||    
T  21214231 atcttttccaaatgaaaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatcttt 21214330  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaa 235  Q
    | |  ||||||||| |||  | |||||||||||    
T  21214331 ctataaaacttatttcaaaaataacacaaaaaa 21214363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 23514554 - 23514610
Alignment:
Q  227 cacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  23514554 cacacaaaattatacctcaaatcaataagtgttagttttcttaataaatgtgaatta 23514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 194
Target Start/End: Original strand, 46303528 - 46303624
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattttt 194  Q
    ||||| ||||||| || | |||||||||||||||||||||| |||||||| | |||  |||||||||||||||  ||||||||| |||||| |||||    
T  46303528 aaatagtcttttctaaagaaaaattaaatgcaaattgcatttaatttgttattcttcctattttctccataatcattaaccaataagaatttttttt 46303624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 13541347 - 13541402
Alignment:
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  13541347 acaaaaaattatacctcaaattactaagtgttaattttcttaataagtgtgaatta 13541402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 35963161 - 35963324
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    ||||||||||||||||||||||| |||||  | ||  ||| |||||||||||||    |||||||| | |||| ||||| |||||| | |  |||||| |    
T  35963161 taaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctataaaactttt 35963260  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |||||  | ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  35963261 tccaaacaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 35963324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 276
Target Start/End: Complemental strand, 22479187 - 22479009
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||     |||||||| || | ||||||||    
T  22479187 aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttaca 22479088  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    |||| | |  ||||||||| ||| || ||||||||||| |||    ||||  | || || |||||||||||||||||||    
T  22479087 tcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataagtg 22479009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 231
Target Start/End: Complemental strand, 30454857 - 30454725
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||| | ||  ||| |||||||| ||||    |||||||| | |||| ||||||||    
T  30454857 aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttaca 30454759  T
Q  198 tctttccacgaaacttattccaaggagaacacaa 231  Q
    |||||| |  ||||||||| |||||| |||||||    
T  30454758 tctttctataaaacttatttcaaggataacacaa 30454725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 103 - 279
Target Start/End: Original strand, 10114901 - 10115077
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    ||||||||||| | ||||||||| ||||| ||||||||||||| | |  |||| |||||||| |||||     |||||||| |||| ||||||||||||     
T  10114901 atcttttccaaaggaaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttc 10115000  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | |  ||||||||| ||| || || ||||||||||||    ||||  | || || ||||||||||||||||||||||    
T  10115001 ctataaaacttatttcaaagataatacaaaaaattatgttacaaactactatgttttagttttcttaataagtgtga 10115077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 20847383 - 20847265
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| |||||||||| |  ||  ||| ||||||||||||||   | |||||||| |||| |||  ||||||| | | |||||||||    
T  20847383 taaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatgaaacttat 20847284  T
Q  216 tccaaggagaacacaaaaa 234  Q
    ||||| || ||||||||||    
T  20847283 tccaaagaaaacacaaaaa 20847265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 26208084 - 26208186
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||||||||| ||| |||||||||||||   | ||||||||||| |||||   ||||  ||| || |||||||||||||||||||    
T  26208084 ccaatgaaaattgtttttacatcttaccatgaaacttattccagacaaaacacaaaaaactatactctaaattcttatgttttagttttcttaataagtg 26208183  T
Q  277 tga 279  Q
    |||    
T  26208184 tga 26208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 280
Target Start/End: Original strand, 31292672 - 31292778
Alignment:
Q  174 taaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 273  Q
    |||||||||| |||| |||||||||||| |||   |||| ||||||||||||||| || ||||||||| |||||| |  | || |||||||| | |||||    
T  31292672 taaccaatgaaaattgtttttacatcttcccatagaactaattccaaggagaacaaaagaaattatacttcaaattaccatgttttagttttttcaataa 31292771  T
Q  274 gtgtgaa 280  Q
    |||||||    
T  31292772 gtgtgaa 31292778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 38401365 - 38401507
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    ||||||||||||||||   ||||||||||||||| | |||| |||||  | || |||| |||||||| ||||||    |||||||| |||||||||||||    
T  38401365 aaataatcttttccaaaagaaaattaaatgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttaca 38401464  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattata 240  Q
    |||  | |  ||||||||| ||| || ||||||||||| ||||    
T  38401465 tctccctataaaacttatttcaaagataacacaaaaaactata 38401507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 2994551 - 2994479
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||    
T  2994551 aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataat 2994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 279
Target Start/End: Original strand, 10014259 - 10014435
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    ||||||||||| | ||||||||| ||||| ||||||||||||  | |  ||||||||||||| |||||     |||||||| |||| ||||||||||||     
T  10014259 atcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttc 10014358  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | |  ||||||||| ||| || || ||||| ||||||    ||||  | || || ||||||||||||||||||||||    
T  10014359 ctataaaacttatttcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagtgtga 10014435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 279
Target Start/End: Original strand, 10252001 - 10252177
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    ||||||||||| | ||||||||| ||||| ||||||||||||| | |  |||| |||||||| |||||     |||||||| |||| ||||||||||||     
T  10252001 atcttttccaaaggaaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttc 10252100  T
Q  203 ccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | |  ||||||||| ||| || || ||||| ||||||    ||||  | || || ||||||||||||||||||||||    
T  10252101 ctataaaacttatttcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagtgtga 10252177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 22456141 - 22456069
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||    
T  22456141 aaattatcttttccaaaggaaaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataat 22456069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 47444106 - 47444034
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||    
T  47444106 aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataat 47444034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 14752323 - 14752160
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  ||| ||||| |||||||    ||  |||||| |||| |||||||||||| | |  ||  || |    
T  14752323 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaatttttt 14752224  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || |||||||||||||||||  |||||  ||| || |||||||||| |||||||||||    
T  14752223 tccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttctaaataagtgtga 14752160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 221
Target Start/End: Complemental strand, 23209393 - 23209290
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    ||||||||||||||||||||||| | |||| ||| ||| ||||||||  ||| |  |||||||| | |||||||||| |||||||| |  |||||||||     
T  23209393 aaattaaatgcaaattgcattcattatgttctccctttcattttctctctaactaataaccaataaaaattattttttcatctttctataaaacttattt 23209294  T
Q  218 caag 221  Q
    ||||    
T  23209293 caag 23209290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 34194873 - 34194976
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| |||||||| |||| | ||  ||| |||||||| ||||    |||||||||| |||| ||||||||    
T  34194873 aaattatcttttccaaaggaaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttaca 34194972  T
Q  198 tctt 201  Q
    ||||    
T  34194973 tctt 34194976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 41476390 - 41476287
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaag-tgttagttttcttaataagt 275  Q
    ||||||| ||||||||||||||||||| |  |||||| || ||| || ||||||||||| |||||  |||||  ||| | | ||||||||||||||||||    
T  41476390 ccaatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatgtttttagttttcttaataagt 41476291  T
Q  276 gtga 279  Q
    ||||    
T  41476290 gtga 41476287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 37075030 - 37075128
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagt 275  Q
    ||||||| |||| | |||||||||| | |  |||||| |||||| || ||||||||||||||||| ||||||  ||| || |||||||| |||||||||    
T  37075030 ccaatgaaaattgtgtttacatcttcctataaaactttttccaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttttttaataagt 37075128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 25242292 - 25242239
Alignment:
Q  117 aaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    ||||||||| ||||| ||||||||||||||| || ||||||||||||| |||||    
T  25242292 aaaattaaacgcaaagtgcattcaatttgttctcttttttattttctctataat 25242239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 36546612 - 36546717
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| ||||  ||||||||||| | | ||||||| |||||| || || |||||||| |||||   ||||  ||| || |||||||||||||||||||    
T  36546612 ccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaatttttatgttttagttttcttaataagtg 36546711  T
Q  277 tgaatt 282  Q
    ||||||    
T  36546712 tgaatt 36546717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 36561703 - 36561598
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| ||||  ||||||||||| | | ||||||| |||||| || || |||||||| |||||   ||||  ||| || |||||||||||||||||||    
T  36561703 ccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaatttttatgttttagttttcttaataagtg 36561604  T
Q  277 tgaatt 282  Q
    ||||||    
T  36561603 tgaatt 36561598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 2927359 - 2927462
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaat-tatacctcaaatcattaagtgttagttttcttaataagt 275  Q
    ||||||| ||||||||||||||||| |||  ||||||||||||| || || ||||||||  ||| |  |||||  ||| || |||||||||||||||| |    
T  2927359 ccaatgaaaattatttttacatcttcccataaaacttattccaaagaaaatacaaaaaaactatgctacaaattcttatgttttagttttcttaataaat 2927458  T
Q  276 gtga 279  Q
    ||||    
T  2927459 gtga 2927462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 16033094 - 16032987
Alignment:
Q  124 aatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaagga 223  Q
    |||||||| ||||||||||||| | ||  ||| ||||| || |||| |  |||||||||| |||| |||||||||||| | |  ||||||||| ||||||    
T  16033094 aatgcaaagtgcattcaatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaacttatttcaagga 16032995  T
Q  224 gaacacaa 231  Q
     |||||||    
T  16032994 taacacaa 16032987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 46557216 - 46557166
Alignment:
Q  185 aattatttttacatctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    ||||||||||||||||| ||| ||||||||||| || || |||||||||||    
T  46557216 aattatttttacatcttcccatgaaacttattctaaagaaaacacaaaaaa 46557166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 46711712 - 46711610
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    |||||||  ||| |||||||||||| | |  |||||| || ||| || |||||||||||||||||  |||||  ||| || || ||||||||||||||||    
T  46711712 ccaatgaatattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttcgttttcttaataagtg 46711613  T
Q  277 tga 279  Q
    |||    
T  46711612 tga 46711610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 54464902 - 54464848
Alignment:
Q  225 aacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||||| |||||    
T  54464902 aacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 54464848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 1335025 - 1335058
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  1335025 tcatattctttgtctcaaaatataagcaaaaaag 1335058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 49067028 - 49067061
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  49067028 tcatattctttgtctcaaaatataagcaaaaaag 49067061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 53270306 - 53270406
Alignment:
Q  178 caatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    |||||| |||||||||| |||||||| | ||||||| || ||| || ||||||||||| |||||  |||||  ||| || ||| |||||||||| |||||    
T  53270306 caatgaaaattattttttcatctttctatgaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt-ttaattttcttaatgagtgt 53270404  T
Q  278 ga 279  Q
    ||    
T  53270405 ga 53270406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 3084279 - 3084163
Alignment:
Q  132 ttgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaa 231  Q
    ||||||| |||||||| | | | | |||||||||||||    ||||||||||  ||| |||||||||||| |||  ||||| |||  |||||| ||||||    
T  3084279 ttgcatttaatttgtttttcctctcattttctccataacaaataaccaatgaatattgtttttacatcttcccataaaactaattttaaggaggacacaa 3084180  T
Q  232 aaaattatacctcaaat 248  Q
     ||||||||| ||||||    
T  3084179 gaaattatacttcaaat 3084163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 23513482 - 23513514
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaa 60  Q
    ||||||| |||||||||||||||||||||||||    
T  23513482 tcatattctttgtctcaaaatataagcaaaaaa 23513514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 26641317 - 26641285
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaa 60  Q
    ||||||| |||||||||||||||||||||||||    
T  26641317 tcatattctttgtctcaaaatataagcaaaaaa 26641285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 28793081 - 28793109
Alignment:
Q  33 ttatttgtctcaaaatataagcaaaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  28793081 ttatttgtctcaaaatataagcaaaaaag 28793109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 54725717 - 54725665
Alignment:
Q  117 aaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataa 169  Q
    |||||||||| |||| ||||||||||||| | || ||||||||||||| ||||    
T  54725717 aaaattaaatacaaagtgcattcaatttgctctcttttttattttctcaataa 54725665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 8e-90; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 28 - 284
Target Start/End: Original strand, 40219971 - 40220228
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| ||||       |||||||||||        |||||||||| ||||||||||||||||||||||||    
T  40219971 tcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattat-gttttttcaaacaaata-tcttttccaatgtaaaattaaatg 40220068  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40220069 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaac 40220168  T
Q  228 acaaaaaattatacctcaaatc---attaagtgttagttttcttaataagtgtgaattac 284  Q
    ||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||    
T  40220169 acaaaaaattatacctcaaatcactactaagtgttagttttcttaataagtgtgaattac 40220228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 44875093 - 44875347
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| | ||       |||||||||||        ||||||||| |||||||||||||||||||||||||    
T  44875093 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattat-gttttttcaaacaaatcatcttttccaatgtaaaattaaatg 44875191  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  44875192 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattctaaggagaac 44875291  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  44875292 acaaaaatttatacctcaaatcactaagtgttagttttcttagtaagtgtgaatta 44875347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 23874009 - 23873819
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||    
T  23874009 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcttttttattttctccataatttttaaccaatgaaaattattt 23873910  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23873909 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 23873819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 38942623 - 38942433
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  38942623 caaacaaatcattttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattattt 38942524  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38942523 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 38942433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 43656219 - 43656029
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  43656219 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttcttcataatttttaaccaatgaaaattattt 43656120  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43656119 ttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 43656029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 28 - 279
Target Start/End: Original strand, 25990662 - 25990912
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| | ||       |||||||||||        ||||||||| |||||||||||||||||||||||||    
T  25990662 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattat-gttttttcaaacaaatcatcttttccaatgtaaaattaaatg 25990760  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  25990761 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatatttccatgaaacttattccaaggagaac 25990860  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  25990861 acaaaaaattatacctcaaatcactaagtgttagttttcttaataaatgtga 25990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 28916697 - 28916507
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  28916697 caaacaaatcatcttttccaatataaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattattt 28916598  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28916597 ttacatctttccatgaaacttattccaagaagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 28916507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 40935795 - 40935605
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40935795 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 40935696  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  40935695 ttacatctttccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataaatgtgaatta 40935605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 18036522 - 18036712
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  18036522 caaacaaatcatcttttccaaagtaaaattaaatgcaaattgcattcaatttattctcctttttattttcttcataatttttaaccaatgagaattattt 18036621  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18036622 ttacatcttttcatgaaacttattccaagaagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtatgaatta 18036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 18852201 - 18852391
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  18852201 caaacaaattattttttccaatgtaaaattaaatgcaaattgcattcaatttgttcccctttttattttctccataatttttaaccaatgagaattattt 18852300  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  18852301 ttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaactgttagctttcttaataagtgtgaatta 18852391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 31970491 - 31970301
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31970491 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 31970392  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||    
T  31970391 ttacatctttccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttaatcttcttaataagtgtgaatta 31970301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 46949299 - 46949489
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  46949299 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgtattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattattt 46949398  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  46949399 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataaatgtgaatta 46949489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 26907271 - 26907083
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||  |||||||    
T  26907271 caaacaaattatctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaacga--attattt 26907174  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26907173 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtattagttttcttaataagtgtgaatta 26907083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 29488726 - 29488916
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  29488726 caaacaaataatattttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatttttt 29488825  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  29488826 ttatatcttttcatgaaacttattccaaggagaacacaacaaattatacctcaaatcactaagtgttcgttttcttaataagtgtgaatta 29488916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 40960656 - 40960466
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40960656 caaacaaatcatctttttcaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 40960557  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||| |||||||||    
T  40960556 ttacatctttccatgaaacttattccaaggagaacacaaaaaatcatgcctcaaatcactaagtgttagttttcttaataaatgtgaatta 40960466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 28017636 - 28017824
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  28017636 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgataattattt 28017735  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| |||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28017736 ttacatctttccatgaaacttatttcaaggag--tacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 28017824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 15285782 - 15285971
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  15285782 caaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctctttttt-ttttctccataatttttaaccaatgagaattattt 15285880  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  15285881 ttacatatttccatgaaacttatttcaaggagaacacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaatta 15285971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 49924397 - 49924587
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| || |||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  49924397 caaacaaatcatcttttccaatgtaaaattaaatgcaagttacatttaatttgttctcctttttattttcttcatgatttttaaccaatgagaattattt 49924496  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49924497 ttacatctttccatgaaacttatttcaagaagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 49924587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 9127957 - 9128211
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| | ||       ||||||||||||       ||||||||| ||||||| |||||||||||||||||    
T  9127957 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatatttttt-caaacaaatcatctttttcaatgtaaaattaaatg 9128055  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
     |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||    
T  9128056 taaattgcattcaatttatttacctttttattttctccataatttttaaccaatgagaattatttttacatctttccattaaatttatttcaaggagaac 9128155  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  9128156 acaaaaaagtatacctcaaatcactaagtgttaattttcttaataagtgtgaatta 9128211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 35941819 - 35942009
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| |||||| |||||||     
T  35941819 caaacaaatcatctttttcaatgtaaaattaaatacaaattgcattcaatttgttctcttttttattttctccataatttttaatcaatgaaaattatta 35941918  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||  ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35941919 ttacatctttccataaaacttatttcaaggagagcacaaaaaattatacctcaaataattaagtgttagttttcttaataagtgtgaatta 35942009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 15311156 - 15311345
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||  ||||||| |||||||||||||||||||  ||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  15311156 caaacaaaacatctttttcaatgtaaaattaaatgcag-ttgtattcaatttgttctcctttttattttctctataatttttaaccaatgagaattattt 15311254  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||  |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15311255 ttatttctttccatgaaacttattccaaggagaatacaaaaaattatacctcaaatcattaagtattagttttcttaataagtgtgaatta 15311345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 45358058 - 45357869
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||| ||  ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  45358058 caaacaaatcatcttttccaatgtaaaattaaatacatgttgcatttaatttgttcacctttttattttctccataatttttaaccaatgagaattattt 45357959  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  45357958 ttacatatttccatgaaacttattccaaag-gaacacaaaaaattatacctcaaatcactaagtgttagttgtcttaataagtgtgaatta 45357869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 18913528 - 18913337
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaat-gagaattatt 191  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| |||||||| ||||||||| ||| ||||||||||    
T  18913528 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttatgttctccatgatttttaactaattgagaattatt 18913429  T
Q  192 tttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  18913428 tttacatcttttcatgaaacttattccgaggagaacacaaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaatta 18913337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 93 - 284
Target Start/End: Original strand, 47996932 - 47997123
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  47996932 caaacaaatcatcttttccaatgtaaaattaaatacaaattgtattcaatttgttctcctttttattttctccataatttttaactaatgagaattattt 47997031  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattac 284  Q
    ||| |||||||||  ||||||| | |||| | |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  47997032 ttatatctttccaaaaaacttacttcaagaaaaacacaaaaaataatacctcaaatcactaaatgttagttttcttaataagtgtgaattac 47997123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 26479717 - 26479907
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||| |||| |||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  26479717 caaacaaatcatcttttccaatgtaaaattcaatgaaaattgcattcaatatgttctcctttttattttctctatagtttttaaccaatgagaattattt 26479816  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||| ||||||  |||||||||  |||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  26479817 ttacatttttccataaaacttattttaaggagaacacaaaaaattatacctcaaatcactaaatgttagtttttttaataagtgtgaatta 26479907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 39026428 - 39026238
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| || ||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  39026428 caaataaatcatattttccaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaataagaattattt 39026329  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||    
T  39026328 ttacatctttccatgaaacttatttcaagaagaacacaaaaaattatacatcaaatcaccaagtgttagttttcttaataaatgtgaatta 39026238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 30 - 283
Target Start/End: Original strand, 35189116 - 35189370
Alignment:
Q  30 atattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatgca 129  Q
    ||||| |||||||||||||||||||||||||| | ||       | |||||||||        ||||||||||||||||| |||||||||||||| | ||    
T  35189116 atattctttgtctcaaaatataagcaaaaaagaccaacttttatggtattattatgtttttttcaaacaaataatctttttcaatgtaaaattaactaca 35189215  T
Q  130 aattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacac 229  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||| ||||||     
T  35189216 aattgcattcaatgtgttctcctctttattttctccataatttttaaccaatgaaaattatttttacatatttccatgaaacttatttcaagaagaacat 35189315  T
Q  230 aaaaaattatacctcaaatcattaagtgttag-ttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||||| | |||||||||| |||||||||||| |||||||||    
T  35189316 aaaaaattatacctcaaattactaagtgttagtttttcttaataaatgtgaatta 35189370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 95 - 283
Target Start/End: Complemental strand, 6848486 - 6848302
Alignment:
Q  95 aacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattttt 194  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6848486 aacaaatcatcttttccaatctaaaattaaatgcaaattgcattcaatgcgttatcctttttattttctccataatttttaaccaatgagaattattttt 6848387  T
Q  195 acatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |   ||||||| |||||||||| ||||||||||||||||||| ||||||||||||| ||| | |||||||| ||||||| |||||||||    
T  6848386 a---ctttccatgaaacttatttcaaggagaacacaaaaaatcatacctcaaatcactaattattagtttt-ttaataaatgtgaatta 6848302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 4529165 - 4529344
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||  |||||||||||||    
T  4529165 caaataaatcattttttccaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttgttttctccataatttttaacagatgagaattattt 4529264  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||           |||||||||||| |||||||||||||||||||||||| |||||||    
T  4529265 ttacatctttccatgaaacttattccaaggagaac-----------tacctcaaatcactaagtgttagttttcttaataagtatgaatta 4529344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 116 - 280
Target Start/End: Original strand, 35884212 - 35884376
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    ||||||||||||||||||||||| ||| |||| | |||||||||||||| |||||||||||||||||| |||||||||||||||||||||  ||| ||||    
T  35884212 taaaattaaatgcaaattgcattaaatgtgttcttctttttattttctctataatttttaaccaatgaaaattatttttacatctttccataaaatttat 35884311  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
    | |||  |||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||    
T  35884312 ttcaaaaagaacacaaaaaattatacctcaaattactaagagttagttttcttaataaatgtgaa 35884376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 107 - 280
Target Start/End: Original strand, 36383920 - 36384093
Alignment:
Q  107 tttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccac 206  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| |||| |||||| |||||||||     
T  36383920 tttccaaagtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataataattagccaatgataattgtttttatatctttccat 36384019  T
Q  207 gaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
    |||| |||||||||  | |||||||||||||||| ||||||| || | || |||  ||||||||||||||||||    
T  36384020 gaaatttattccaaaaataacacaaaaaattatatctcaaattataatgttttaactttcttaataagtgtgaa 36384093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 52984999 - 52985101
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||||||||| ||  |||||||||||||| || ||||||||||| |||||  |||||  ||| || |||||||||||||||||||    
T  52984999 ccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaattcttatgtattagttttcttaataagtg 52985098  T
Q  277 tga 279  Q
    |||    
T  52985099 tga 52985101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 41063728 - 41063833
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||| ||| | ||||||||||||||| ||||||||||||||| ||  ||| |||||||| ||||    |||||||||| |||||||||||||    
T  41063728 aaattatctttttcaaagaaaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttaca 41063827  T
Q  198 tctttc 203  Q
    ||||||    
T  41063828 tctttc 41063833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 44056458 - 44056377
Alignment:
Q  115 gtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttac 196  Q
    |||||||||||||||| |||||||| ||||  | ||||| ||||||||||||||||  |||||||||||||||| |||||||    
T  44056458 gtaaaattaaatgcaatttgcattccattttctctccttcttattttctccataatcattaaccaatgagaattgtttttac 44056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 15959796 - 15959633
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |    
T  15959796 taaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 15959697  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || |||||||||||||||||  |||||  ||| || |||||||||||||||| |||||    
T  15959696 ttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataaatgtga 15959633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 279
Target Start/End: Complemental strand, 24728781 - 24728619
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| |||| |||||  | ||  ||||||||| ||||||||   |  ||||||| |||| |||||||||||| ||| |||||||||||    
T  24728781 aaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccatgaaacttattc 24728682  T
Q  218 caaggagaacacaaaaaat-tatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
     || || |||||||||||  ||| |  |||||  ||| || ||||||||||||||||||||||    
T  24728681 gaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtga 24728619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 235
Target Start/End: Complemental strand, 25185478 - 25185341
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||||| || |||| |||||||| |||||     |||||||| | || |||| |||    
T  25185478 aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcaca 25185379  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    |||| | |  ||||||||| ||| || |||||||||||    
T  25185378 tcttcctataaaacttatttcaaagataacacaaaaaa 25185341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 268
Target Start/End: Complemental strand, 3861849 - 3861699
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    ||||||||||||||||||  ||| ||||| || ||||||  ||||| | ||||||   || ||||||| |||| |||||||||||||| |  ||||||||    
T  3861849 taaaattaaatgcaaattatatttaattt-ttctcctttc-atttttttcataatcaatagccaatgaaaattgtttttacatctttcaataaaacttat 3861752  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttctt 268  Q
    || || || |||| |||||||||||| |||||| |||| || |||||||||||    
T  3861751 tctaaagaaaacataaaaaattatacttcaaattattatgttttagttttctt 3861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 37735537 - 37735414
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| ||||||||||  | || |||  ||||||||||||||   || ||||| | |||| ||||||| |||| ||| |||||||||||    
T  37735537 aaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccatgaaacttattc 37735438  T
Q  218 caaggagaacacaaaaaattatac 241  Q
    ||| || || |||||||| |||||    
T  37735437 caaagaaaatacaaaaaactatac 37735414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 106 - 280
Target Start/End: Original strand, 7190651 - 7190825
Alignment:
Q  106 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 205  Q
    |||||||| || |||||||||||||||||| || |||||| | ||| | | |||||||| ||||    |||| |||   |||||||||||||||||| ||    
T  7190651 ttttccaaagtgaaattaaatgcaaattgcctttaatttgctctccctctcattttctctataacaaataactaatataaattatttttacatcttttca 7190750  T
Q  206 cgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
       |||| ||| |||||||||||||| ||| |||||   |||| || | || |||||||| ||||||||||||||    
T  7190751 ttgaactaatttcaaggagaacacaagaaactatactctaaattatcatgttttagtttttttaataagtgtgaa 7190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 118 - 280
Target Start/End: Original strand, 42724101 - 42724263
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    ||||||||||||||||||||| |||||| | ||| | | ||||||| |||||    |||| ||| | |||| ||||||||||||  |  |||||| |||     
T  42724101 aaattaaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattgtttttacatcttctcgtgaaactaattt 42724200  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
    |||| |||||| || ||| ||||| |||||| || | || |||||||||||| ||||||||||    
T  42724201 caagaagaacagaagaaactatacttcaaatgataatgttttagttttcttagtaagtgtgaa 42724263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 44148931 - 44148829
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||||||||| ||| |||||||||||||| || ||||||||||| ||| |  |||||  ||| |  ||||||||| |||||||||    
T  44148931 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcgtaataagtg 44148832  T
Q  277 tga 279  Q
    |||    
T  44148831 tga 44148829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 279
Target Start/End: Original strand, 3076302 - 3076463
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| |||| |||||  | ||  ||||||||| |||||||    |  ||||||| ||||||||||||||||| |||  ||||||||||    
T  3076302 aaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccataaaacttattc 3076401  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |||  | ||||||||||| ||| |  |||||  ||| |  ||| ||||||||||||||||||    
T  3076402 caaataaaacacaaaaaactatgctacaaattcttatgctttaattttcttaataagtgtga 3076463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 7397693 - 7397830
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||| | |  |||| |||||||| |||||     |||||||| |||| ||||||||    
T  7397693 aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttaca 7397792  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    |||| | |  ||| ||||| ||| || |||||||||||    
T  7397793 tcttcctataaaatttatttcaaagataacacaaaaaa 7397830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 15912193 - 15912310
Alignment:
Q  106 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 205  Q
    |||||||| | ||||||||||||||| ||||||||||||| | ||||||| ||||||||  ||||    || |||||| |||| |||||||||||| | |    
T  15912193 ttttccaaagaaaaattaaatgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttccta 15912292  T
Q  206 cgaaacttattccaagga 223  Q
      ||||||||| ||||||    
T  15912293 taaaacttatttcaagga 15912310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 44510386 - 44510321
Alignment:
Q  105 cttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    ||||||||| | ||||||||||||||| ||||||||||||| | ||||||| |||||||| |||||    
T  44510386 cttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataat 44510321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 13291781 - 13291909
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 202  Q
    |||||||||||||  ||| ||||||||||||||| ||| |||| |  || || ||||||||| |||| |  |||| ||||  |||| || || |||||||    
T  13291781 atcttttccaatgagaaaataaatgcaaattgcactcattttggtcccccttatattttctcaataactaataacaaatgcaaattgttcttgcatcttt 13291880  T
Q  203 ccacgaaacttattccaaggagaacacaa 231  Q
    | | ||||||||||||||||| |||||||    
T  13291881 ctatgaaacttattccaaggataacacaa 13291909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 13351686 - 13351770
Alignment:
Q  117 aaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctt 201  Q
    |||| |||||||||| ||||||||||||||| ||||||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  13351686 aaaactaaatgcaaagtgcattcaatttgttctccttttcattttctctataatcaactaccaatgaaaattgtttttacatctt 13351770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 279
Target Start/End: Complemental strand, 39555742 - 39555579
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| |||||||| |  | ||  ||| ||||| |||||||    || ||||||| |||| |||||||||||||| |  |||||| |    
T  39555742 taaaattaaatgcaaattacattcaatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 39555643  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | ||| || ||||||||||  |||||  |||||  ||| || ||| ||||||||||||||||||    
T  39555642 ttcaaagaaaacacaaaaacctatactccaaattcttatgttttaattttcttaataagtgtga 39555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 231
Target Start/End: Complemental strand, 51339072 - 51338938
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtc-ctttttattttctccataatttttaaccaatgagaattatttttac 196  Q
    |||| ||||||||||| |  ||||||||||||| ||||||| | | |||| || ||||  |||||||| |||| |  |||||||||| ||||  ||||||    
T  51339072 aaatcatcttttccaaagagaaattaaatgcaatttgcatttactatgttttctctttcaattttctctataactaataaccaatgaaaattgattttac 51338973  T
Q  197 atctttccacgaaacttattccaaggagaacacaa 231  Q
    ||||||| | |||||||||| ||| || |||||||    
T  51338972 atctttctatgaaacttatttcaaagacaacacaa 51338938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 231
Target Start/End: Complemental strand, 51840670 - 51840536
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtc-ctttttattttctccataatttttaaccaatgagaattatttttac 196  Q
    |||| ||||||||||| |  ||||||||||||| ||||||| | | |||| || ||||  |||||||| |||| |  |||||||||| ||||  |||||     
T  51840670 aaatcatcttttccaaagagaaattaaatgcaatttgcatttactatgttttctctttcaattttctctataactaataaccaatgaaaattgattttat 51840571  T
Q  197 atctttccacgaaacttattccaaggagaacacaa 231  Q
    ||||||| | |||||||||||||| || |||||||    
T  51840570 atctttctatgaaacttattccaaagataacacaa 51840536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 280
Target Start/End: Complemental strand, 52841599 - 52841437
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    ||||||| ||||||||||| ||| |||| | | | ||| |||||| | |||| |  |||||||||| |||| |||| ||||||||| | ||||||||||     
T  52841599 aaattaagtgcaaattgcaatcattttgctcttcctttcattttccctataactaataaccaatgaaaattgttttaacatctttctatgaaacttattt 52841500  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
     ||||| || |||| ||| |||||  ||||  |||  || |||||||||||||||| ||||||    
T  52841499 taaggataagacaagaaactatactacaaactattgtgttttagttttcttaataaatgtgaa 52841437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 279
Target Start/End: Original strand, 2126045 - 2126206
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |  |||||| |||    
T  2126045 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 2126144  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||| || ||||||||||| ||||   |||||  ||| || |||||||||||||||| |||||    
T  2126145 caaagaaaacacaaaaaactatattccaaattcttatgttttagttttcttaataaatgtga 2126206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 231
Target Start/End: Complemental strand, 5858545 - 5858412
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||| ||| | ||||||||||||||| ||||||||||||| | ||  ||| |||||||| ||||    || ||||||| |||| |||||| |    
T  5858545 aaattatctttttcaaaggaaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttata 5858446  T
Q  198 tctttccacgaaacttattccaaggagaacacaa 231  Q
    |||| | |  ||||||||| |||||| |||||||    
T  5858445 tcttcctataaaacttatttcaaggataacacaa 5858412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 33369558 - 33369718
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | ||  ||| ||||| |||||||    || ||||||| |||| |||||||||||    |  |||||| |    
T  33369558 taaaattaaatgcaaattacattcaattttctctc--tttcattttttccataaccaatagccaatgaaaattgtttttacatctcat-ataaaactttt 33369654  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  33369655 tccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 33369718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 16661502 - 16661569
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtccttttt-attttctc 164  Q
    |||| ||||||| ||||  ||||||||||||||| ||||||||||||||| || ||||| ||||||||    
T  16661502 aaattatctttttcaatagaaaattaaatgcaaagtgcattcaatttgttctcttttttcattttctc 16661569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 24190566 - 24190637
Alignment:
Q  208 aaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |||||| |||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  24190566 aaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 24190637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 2459955 - 2459913
Alignment:
Q  190 tttttacatctttccacgaaacttattccaaggagaacacaaa 232  Q
    |||||||||||| ||  ||||||||||||||||||||||||||    
T  2459955 tttttacatcttcccctgaaacttattccaaggagaacacaaa 2459913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 10558910 - 10558796
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||| ||||| |||| ||||| || ||  ||  ||||||||||||||   || ||||||| |||| |||||||||||| |||  ||| ||||||    
T  10558910 aaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccataaaaattattc 10558811  T
Q  218 caaggagaacacaaa 232  Q
    ||| || ||||||||    
T  10558810 caaagaaaacacaaa 10558796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 32983266 - 32983165
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| ||||||||||||   |  |||||| |||||| || ||||||||||| ||||| || |||  ||| || |||||||||||||||||||    
T  32983266 ccaatgaaaattgtttttacatcttcttataaaactt-ttccaaagaaaacacaaaaaactatacttccaatttttatgttttagttttcttaataagtg 32983168  T
Q  277 tga 279  Q
    |||    
T  32983167 tga 32983165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 46803758 - 46803708
Alignment:
Q  185 aattatttttacatctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    |||| |||||||||||||| | |||||||||| |||||| |||||||||||    
T  46803758 aattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaa 46803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 6848550 - 6848517
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  6848550 tcatattctttgtctcaaaatataagcaaaaaag 6848517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 7468027 - 7467958
Alignment:
Q  208 aaacttattccaaggagaacacaaaaaatta-tacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    |||||| |||||| || |||||||||||||| ||| ||||||  ||| || |||||||||||||||||||    
T  7468027 aaactttttccaaagaaaacacaaaaaattattacttcaaattcttatgttttagttttcttaataagtg 7467958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 15285718 - 15285751
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  15285718 tcatattctttgtctcaaaatataagcaaaaaag 15285751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 28120911 - 28120826
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctt 201  Q
    |||||||||||||||||| ||||||||||  | ||  ||| ||||| ||||||||   || ||||||| |||| ||||||||||||    
T  28120911 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatctt 28120826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 46949235 - 46949268
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||| ||||||||||||||||||||||||||    
T  46949235 tcatattctttgtctcaaaatataagcaaaaaag 46949268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 30701522 - 30701418
Alignment:
Q  135 cattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaa 234  Q
    ||||||||||| | || |||| |||||||| |||||     |||||||| ||||||||| ||||||| | |  ||||||||| ||| || ||||||||||    
T  30701522 cattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaaaa 30701423  T
Q  235 attat 239  Q
    |||||    
T  30701422 attat 30701418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 35941755 - 35941787
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaa 60  Q
    ||||||| |||||||||||||||||||||||||    
T  35941755 tcatattctttgtctcaaaatataagcaaaaaa 35941787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 7e-84; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 10227826 - 10228080
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| | ||       |||||||||||        ||||||||| |||||||||||| ||||||||||||    
T  10227826 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattat-gtttttccaaacaaatcatcttttccaatataaaattaaatg 10227924  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  10227925 caaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcgatgaaacttatttcaaggagaac 10228024  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10228025 actaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 10228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 12278684 - 12278873
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12278684 caaacaaatcattttttcaaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 12278783  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12278784 ttacaactttccatgaaacttattctaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatt 12278873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 29 - 283
Target Start/End: Complemental strand, 17722051 - 17721798
Alignment:
Q  29 catattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatgc 128  Q
    |||||| |||||||||||||||||||||||||| | ||       |||||||||||        |||| |||| || |||||||||||||||||||||||    
T  17722051 catattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattat-gttttttcaaagaaatcatattttccaatgtaaaattaaatgc 17721953  T
Q  129 aaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaaca 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  17721952 aaattgcattcaatttgttctcctttttattttctccataatttttaacaaatgagaattatttttacatgtttccatgaaacttattccaaggagaaca 17721853  T
Q  229 caaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17721852 caaaaaattatacctcaaatcactaagtattagttttcttaataagtgtgaatta 17721798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 30766424 - 30766614
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||| |||| || |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  30766424 caaagaaattatttttttcaatgtaaaattaaatgcaaattgcattgaatttgttctcctttttattttctccataatttttaactaatgagaattattt 30766523  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  30766524 ttacatctttccatgaaacttattccaaggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaatta 30766614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 30949113 - 30949303
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  30949113 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctctataatttttaaccaatgagaattattt 30949212  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  30949213 ttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcaataaatgttagttttgttaataagtgtgaatta 30949303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 93 - 272
Target Start/End: Original strand, 17598271 - 17598450
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||    
T  17598271 caaacaaatcttcttttccaatgtaaaattaaatgcaaattgcattcaatttattctcttttttattttctccataatttttaaccaatgagaattattt 17598370  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaata 272  Q
    |||||||||||||  ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17598371 ttacatctttccataaaatttattccaaagagaacacaaaaaattatacctcaaatcattaagtgttaattttcttaata 17598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 374077 - 374267
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  374077 caaacaaatcatattttccgatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctctataatttttaaccaatgaaaattattt 374176  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
     |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||| |||||||| ||||||| |||||||||    
T  374177 atacatctttccatgaaacttattctaaggagaacacaaaaaattatacctcaaataactaagtattagtttttttaataaatgtgaatta 374267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 93 - 283
Target Start/End: Complemental strand, 31887300 - 31887110
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||||||||||||||| | ||||||||    
T  31887300 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcttttttattttctccataatttttaaccaataaaaattattt 31887201  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||| ||||||||||  ||  | |||||||||||| |||  |||||||| | |||||||||||| ||||||||||| |||||    
T  31887200 ttacatctttccatgaaacttattaaaaaaaaaacacaaaaaatcatatatcaaatcactgagtgttagttttattaataagtgtaaatta 31887110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 93 - 255
Target Start/End: Original strand, 33756234 - 33756396
Alignment:
Q  93 caaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt 192  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  33756234 caaacaaatcatttttttcaatgtaaaattaaatgcaaattgcattcaatttgtcctccttttcattttctccataatttttaaccaatgagaattattt 33756333  T
Q  193 ttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaag 255  Q
    |||||||||| ||  ||||||| | ||||||||||| ||||||| ||||||||||||| ||||    
T  33756334 ttacatctttgcataaaacttacttcaaggagaacaaaaaaaataatacctcaaatcactaag 33756396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 103 - 282
Target Start/End: Complemental strand, 32882862 - 32882681
Alignment:
Q  103 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataattttta--accaatgagaattatttttacatct 200  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||  ||| |||||| |||  || |||||||||| |||||||||||    
T  32882862 atcttttccaaagtaaaattaaatgcaaatcgcattcaatttgttctcctttctattccctctataattattataactaatgagaattgtttttacatct 32882763  T
Q  201 ttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||||| ||||||||||  | | |||||||||||||||||||||||||  |  | || || ||||||||||||||||||||||    
T  32882762 ttccatgaaacttattttatgaagaacacaaaaaattatacctcaaactacaatgtttttgttttcttaataagtgtgaatt 32882681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 5121539 - 5121445
Alignment:
Q  189 atttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5121539 atttttacatctttccatgaaacttattttaaggagaacacaaaaaactatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 5121445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 115 - 282
Target Start/End: Original strand, 21963957 - 21964124
Alignment:
Q  115 gtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaactta 214  Q
    ||||||||||||| ||||| ||| ||||||||| || |||||||||||||||| ||   |||||||| | |||||||||||||||||||||  |||||||    
T  21963957 gtaaaattaaatgtaaatttcatacaatttgttctcttttttattttctccatgatcaataaccaataaaaattatttttacatctttccataaaactta 21964056  T
Q  215 ttccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 282  Q
    ||  |||||||||||||||||||||| ||| ||| | || || |||||||| ||| ||||||||||||    
T  21964057 ttttaaggagaacacaaaaaattatatctctaattactatgttttagttttattagtaagtgtgaatt 21964124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 4987928 - 4988065
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||| ||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||     |||||||| |||||||||||||    
T  4987928 aaattatctttttcaaaggaaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttaca 4988027  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    |||| | |  ||||||||| ||| || |||||||||||    
T  4988028 tcttcctataaaacttatttcaaagataacacaaaaaa 4988065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 7274970 - 7274868
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 276  Q
    ||||||| |||| |||||||||||| ||| |||||||||||||| || || |||||||| ||| |  |||||  ||| || |||||||||||||||||||    
T  7274970 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaatacaaaaaactatgctacaaattcttatgttttagttttcttaataagtg 7274871  T
Q  277 tga 279  Q
    |||    
T  7274870 tga 7274868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 4031972 - 4032109
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| |||||||| || | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||     |||||||| |||| ||||||||    
T  4031972 aaattatcttttcaaagggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttaca 4032071  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    |||| | |  ||||||||| ||| || |||||||||||    
T  4032072 tcttccgataaaacttatttcaaagataacacaaaaaa 4032109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 279
Target Start/End: Complemental strand, 35129212 - 35129047
Alignment:
Q  115 gtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattattt-ttacatctttccacgaaactt 213  Q
    ||||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    |||||||||| |||| ||| ||||||||| | |  ||||||    
T  35129212 gtaaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaactt 35129113  T
Q  214 attccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
     |||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  35129112 tttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 35129047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 5822121 - 5822026
Alignment:
Q  185 aattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 280  Q
    |||| |||||||||||||| | |||||||||||||| || ||||||| |||||||||  ||||  || |  | |||||||||||||||||||||||    
T  5822121 aattgtttttacatctttctatgaaacttattccaaagataacacaagaaattatactacaaactataatattttagttttcttaataagtgtgaa 5822026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 16524384 - 16524501
Alignment:
Q  117 aaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttatt 216  Q
    ||||||||||||||| ||||||||||||||| | ||||| |||||||| |||||     |||||||| |||| |||||||||||| | |  |||||||||    
T  16524384 aaaattaaatgcaaagtgcattcaatttgttct-cttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 16524482  T
Q  217 ccaaggagaacacaaaaaa 235  Q
     ||| || |||||||||||    
T  16524483 tcaaagataacacaaaaaa 16524501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 277
Target Start/End: Complemental strand, 11082401 - 11082240
Alignment:
Q  116 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttat 215  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||  | |  |||||| |    
T  11082401 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 11082302  T
Q  216 tccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 277  Q
    ||||| || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||    
T  11082301 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 11082240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 3888412 - 3888484
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataat 170  Q
    |||| ||||||| ||| | ||||||||||||||| ||||||||||||||| || |||| |||||||| |||||    
T  3888412 aaattatctttttcaaaggaaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataat 3888484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 5881926 - 5881783
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| |  | ||||||||||| || |||| | | || | ||| ||| |||||||| ||||||  |||||||| | |||| ||||||||    
T  5881926 aaatcatcttttccaaagagagattaaatgcaatttccatttattatgctatccctttcattttctctataattaataaccaattaaaattgtttttaca 5881827  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaattatac 241  Q
    |||||| | |||||||| ||||| || |||| || |||||||||    
T  5881826 tctttctatgaaacttagtccaaagataacagaagaaattatac 5881783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 7764089 - 7764144
Alignment:
Q  178 caatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaa 233  Q
    |||||| |||||||||||||| |||| | |||| ||||||||||||||||||||||    
T  7764089 caatgaaaattatttttacatttttcaatgaaatttattccaaggagaacacaaaa 7764144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 279
Target Start/End: Original strand, 21542427 - 21542586
Alignment:
Q  120 attaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattcca 219  Q
    |||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||| | |||| |||||||||||| | |  |||||| |||||    
T  21542427 attaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttcca 21542526  T
Q  220 aggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    | || ||||||||||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  21542527 aagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 21542586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 12278618 - 12278653
Alignment:
Q  26 tttcatattatttgtctcaaaatataagcaaaaaag 61  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12278618 tttcatattctttgtctcaaaatataagcaaaaaag 12278653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 12461583 - 12461498
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttc 203  Q
    ||||||||| |||||| ||||||||||  ||||  || ||||||||||||||    || ||||||| |||| ||||||||||||||    
T  12461583 aaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttc 12461498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 279
Target Start/End: Complemental strand, 17751894 - 17751737
Alignment:
Q  122 taaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaag 221  Q
    |||||||||||| |||||||||| || ||  ||  ||||||||||||||   || |||||||| | | ||||||||| |||  |  ||||||| || ||     
T  17751894 taaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacattttttaaaaaaacttaatctaaa 17751795  T
Q  222 gagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    || ||||||||||| |||||  |||||  |||  | ||| ||||||||||||||||||    
T  17751794 gaaaacacaaaaaactatactccaaattcttatattttaattttcttaataagtgtga 17751737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 30766360 - 30766392
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaa 60  Q
    ||||||| |||||||||||||||||||||||||    
T  30766360 tcatattctttgtctcaaaatataagcaaaaaa 30766392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 30794287 - 30794191
Alignment:
Q  177 ccaatgagaattatttttacatctttccacgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 273  Q
    ||||||| || | |||||||||||| | |  |||||||||||||  | |||| |||||||||||| ||||||  |||  | ||||||||||||||||    
T  30794287 ccaatgaaaaatgtttttacatcttcctataaaacttattccaaataaaacataaaaaattatacttcaaattcttatattttagttttcttaataa 30794191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 150; Significance: 4e-79; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 4545 - 4798
Alignment:
Q  28 tcatattatttgtctcaaaatataagcaaaaaaggctaannnnnnngctattattatannnnnnncaaacaaataatcttttccaatgtaaaattaaatg 127  Q
    ||||||| |||||||||||||||||||||||||| | ||       |||||||||||        ||||||||| |||||| ||||| ||||||||||||    
T  4545 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattat-gtttttccaaacaaatcatcttt-ccaatataaaattaaatg 4642  T
Q  128 caaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaaggagaac 227  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  4643 caaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcgatgaaacttatttcaaggagaac 4742  T
Q  228 acaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 283  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4743 actaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatta 4798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 3155 - 3292
Alignment:
Q  98 aaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttaca 197  Q
    |||| ||||||||||| | ||||||| ||||||| ||||||||||||||| || |||| |||||||| |||||     |||||||  |||| |||||| |    
T  3155 aaattatcttttccaaagcaaaattatatgcaaagtgcattcaatttgttttctttttcattttctctataatcaactaccaatggaaattgtttttaga 3254  T
Q  198 tctttccacgaaacttattccaaggagaacacaaaaaa 235  Q
    |||| | |  ||||||||| ||| || |||||||||||    
T  3255 tcttcctataaaacttatttcaaagataacacaaaaaa 3292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 275
Target Start/End: Original strand, 157801 - 157958
Alignment:
Q  118 aaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattc 217  Q
    |||||||||||||||| |||| |||||  | ||  ||||||||| |||||||    |  ||||||| |||| |||||||||||  ||| |||||||||||    
T  157801 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccatgaaacttattc 157900  T
Q  218 caaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagt 275  Q
    ||| || ||||||||||| ||| |  |||||  ||| |  ||||||||||||||||||    
T  157901 caaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagt 157958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 1831 - 1699
Alignment:
Q  104 tcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttc 203  Q
    |||||| ||| || ||| ||||| ||||||||||| |||||||||||| | | |||||||    |||    ||||||||| || | |||||||||||| |    
T  1831 tctttttcaaagtgaaactaaatacaaattgcatttaatttgttgtccctctcattttctaacaaat----aaccaatgaaaaatgtttttacatcttcc 1736  T
Q  204 cacgaaacttattccaaggagaacacaaaaaattata 240  Q
    || |||||| |||||||||| ||||||| ||||||||    
T  1735 catgaaactaattccaaggaaaacacaataaattata 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 44835 - 44764
Alignment:
Q  208 aaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 279  Q
    |||||| |||||| || ||||||||||| |||||  ||||| |||| || |||||||||||||||| |||||    
T  44835 aaactttttccaaagaaaacacaaaaaaatatactccaaattattatgttttagttttcttaataaatgtga 44764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University