View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17283_high_12 (Length: 243)
Name: NF17283_high_12
Description: NF17283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17283_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 39620457 - 39620677
Alignment:
| Q |
19 |
ccatagaccaaagcttgtaaaagaacatacgaaatttcgattagagcctgcatgaaaatatgaagattggattataaagaaacatagataccgaagcaag |
118 |
Q |
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| T |
39620457 |
ccatagaccaaagcttgtaaaagaacatacgaaatttcgattagagcctgcatgaaaatatgaagattggattataaagaaacatagataccgaagcaag |
39620556 |
T |
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| Q |
119 |
tcatttatttatatgagaatataagtaaagactaaagaaaaccacttgcctgaccaaaagcatatgccagaggagaatacattctggcagcattttccct |
218 |
Q |
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| T |
39620557 |
tcatttatttatatgagaatataagtaaagactaaagaaaaccacttgcctgaccaaaagcatatgccagtggagaatacattctggcagcattttccct |
39620656 |
T |
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| Q |
219 |
atagaaaactgctctctctgc |
239 |
Q |
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| T |
39620657 |
atagaaaactgctctctctgc |
39620677 |
T |
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