View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17285_high_21 (Length: 244)
Name: NF17285_high_21
Description: NF17285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17285_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 32974056 - 32974267
Alignment:
| Q |
14 |
agagatgaaaaaatgtaacaaatgaataaattagagacgaagaggaacaacccataagaactcatctccctacctaaagggcataaggccatcggtgtca |
113 |
Q |
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| T |
32974056 |
agagatgaaaaaatgtaactaatgaataaattagagacgaagaggaacaacccataagaactcatctccctacctaaagggcattaggccatcggtgtca |
32974155 |
T |
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| Q |
114 |
agtgagtgtacaaataaagaagaatgtcaatggagaaattgaaagttagacgaaaatactagtcacaaaaggctacaatgaaaaggttgggattgattat |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32974156 |
agtgagtgtacaaataaagaagaatgtcaatggagaaattgaaagttagacgataatactagtcacaaaaggctacaatgaaaaggttgggattgattat |
32974255 |
T |
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| Q |
214 |
gatgaggtgttt |
225 |
Q |
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|||||||||||| |
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| T |
32974256 |
gatgaggtgttt |
32974267 |
T |
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