View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17285_high_8 (Length: 402)
Name: NF17285_high_8
Description: NF17285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17285_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 8 - 385
Target Start/End: Complemental strand, 41378064 - 41377680
Alignment:
| Q |
8 |
ccaagaaaatatgaacttctttcctaagaataaatttgctccaaagcaacataaagatcata----------attgttgagttcaagtgtgagtgatcta |
97 |
Q |
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| T |
41378064 |
ccaataaaatatgaacttc---cctaagaataaatttggtccaaagcaacataaagatcatattaagagataattgttgagttcaagtgtgggtgattta |
41377968 |
T |
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| Q |
98 |
tctgacatcaactacgaatgatctaaatattcaatatataagacgcaactcatatacctatattggtgcaatgcagaatacggatataatgaaaaaagtg |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
41377967 |
tctgacatcaactacgaatgatctaaatattcaatatataagacgcaactcatatacctatattggtgcaatgcagaatacgggtataatgaaaaaagtg |
41377868 |
T |
|
| Q |
198 |
caaagggacctagacattggggtgatctcaaaagagaatgggcagcttgtaaaggggagatgcaatctccaattgatttgtcgagtgacagagtgagtgt |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41377867 |
caaagggacctagacattggggtgatctcaaaagagaatgggcagcttgtaaaggggagatgcaatctccaattgatttgtcgagtgacagagtgagtgt |
41377768 |
T |
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| Q |
298 |
gatgatcccagagtttggggagctaaagaggaactacaagcctcaacatgctactatatccaacaggggtcatgatgttgcagtaagt |
385 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41377767 |
gatgatcccagagtttggggatctaaagaggaactacaagcctcaacatgctactatatccaacaggggtcatgatgttgcagtaagt |
41377680 |
T |
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