View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17287_high_55 (Length: 266)
Name: NF17287_high_55
Description: NF17287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17287_high_55 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 13 - 266
Target Start/End: Original strand, 28887409 - 28887662
Alignment:
| Q |
13 |
aatatccaaatccaaaaggaaaatgatcacctaggccaaatatgaccttggaataatgagtacatgacagtaatataatcatagttaattaattttctta |
112 |
Q |
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| T |
28887409 |
aatatccaaatccaaaaggaaaatgatcacctaggccaaatatgaccttggaataatgagtacatgacagtaatataatcatagttaattaattttctta |
28887508 |
T |
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| Q |
113 |
ctctaatttccataagctattcttagttgttattttctttataacatttcaatctttccgttaccaatattcatgcaaacggcaattgattccagatata |
212 |
Q |
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| T |
28887509 |
ctctaatttccataagctattcttagttgttattttctttataacatttcaatctttccgttaccaatattcatgcaaacggcaattgattccagatata |
28887608 |
T |
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| Q |
213 |
tatactccttt-aaaaaacattaacatatgtcattgtaaccaacttaacataatt |
266 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
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| T |
28887609 |
tatactcctttaaaaaaacattaacatatgtcattgtaaccaac-taacataatt |
28887662 |
T |
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