View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17287_high_76 (Length: 212)
Name: NF17287_high_76
Description: NF17287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17287_high_76 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 7523105 - 7522925
Alignment:
| Q |
16 |
aatatttaagggagaatattatcggataattcttcttattctacaactatagatgtttctgatatccgtcaaatgataataaatattcaaaattcaaatt |
115 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7523105 |
aatatttaagggagaatattatgggataattcttcttattctgcaactatagatgtttctgatatccgtcaaatgataataaatattcaaaattcaaatt |
7523006 |
T |
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| Q |
116 |
atctttgaagtttttatctttttcacattacttgttgttccgatatcattattcattgtattgtggagcaaccagtgtttc |
196 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7523005 |
atctttgaagtgtttatctttttcacattacttgttgttccgatatcattattcattgtattgtggagcaaccagtgtttc |
7522925 |
T |
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