View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17287_low_20 (Length: 482)

Name: NF17287_low_20
Description: NF17287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17287_low_20
NF17287_low_20
[»] chr7 (59 HSPs)
chr7 (25-248)||(28105499-28105718)
chr7 (344-466)||(28105313-28105435)
chr7 (170-247)||(24389137-24389214)
chr7 (175-248)||(45010961-45011034)
chr7 (177-248)||(17102348-17102419)
chr7 (170-245)||(42019598-42019673)
chr7 (169-247)||(6253791-6253869)
chr7 (170-248)||(17886842-17886920)
chr7 (170-248)||(48788801-48788879)
chr7 (175-248)||(5457264-5457337)
chr7 (170-247)||(10936146-10936223)
chr7 (170-247)||(27396628-27396705)
chr7 (170-246)||(40380036-40380112)
chr7 (170-246)||(43123175-43123251)
chr7 (177-248)||(27396954-27397025)
chr7 (175-246)||(37657194-37657265)
chr7 (170-243)||(27992060-27992133)
chr7 (170-247)||(28469009-28469086)
chr7 (170-247)||(32298776-32298853)
chr7 (170-247)||(47945356-47945433)
chr7 (170-247)||(47950786-47950863)
chr7 (175-247)||(2640177-2640249)
chr7 (177-248)||(20426689-20426760)
chr7 (189-248)||(28469379-28469438)
chr7 (175-246)||(42362450-42362521)
chr7 (177-247)||(17102019-17102089)
chr7 (175-241)||(40379774-40379840)
chr7 (177-246)||(10935794-10935863)
chr7 (177-246)||(42731419-42731488)
chr7 (177-245)||(6253472-6253540)
chr7 (170-246)||(13386099-13386175)
chr7 (175-246)||(18670220-18670291)
chr7 (189-247)||(6571012-6571070)
chr7 (179-245)||(23181355-23181421)
chr7 (177-243)||(37656855-37656921)
chr7 (179-244)||(24388821-24388886)
chr7 (199-248)||(42731800-42731849)
chr7 (175-247)||(22871634-22871706)
chr7 (199-247)||(29141557-29141605)
chr7 (177-245)||(32299064-32299132)
chr7 (169-245)||(34799509-34799585)
chr7 (189-248)||(20425476-20425535)
chr7 (189-247)||(19204488-19204546)
chr7 (177-247)||(27991738-27991808)
chr7 (169-247)||(34793903-34793981)
chr7 (199-248)||(29144363-29144412)
chr7 (169-245)||(1960226-1960302)
chr7 (199-247)||(30127440-30127488)
chr7 (199-243)||(42019978-42020022)
chr7 (170-225)||(17885649-17885704)
chr7 (200-247)||(32053142-32053189)
chr7 (175-246)||(33808323-33808394)
chr7 (170-244)||(19204810-19204884)
chr7 (200-245)||(47946856-47946901)
chr7 (200-245)||(47952286-47952331)
chr7 (199-246)||(2640559-2640607)
chr7 (175-219)||(5455854-5455898)
chr7 (292-320)||(28105426-28105454)
chr7 (180-248)||(43266626-43266694)
[»] chr2 (46 HSPs)
chr2 (170-248)||(39498631-39498709)
chr2 (170-243)||(6588686-6588759)
chr2 (170-247)||(16099376-16099453)
chr2 (170-247)||(37895346-37895423)
chr2 (170-247)||(44044113-44044190)
chr2 (177-248)||(25231207-25231278)
chr2 (170-248)||(39423867-39423945)
chr2 (170-248)||(44045354-44045432)
chr2 (177-247)||(45556111-45556181)
chr2 (175-248)||(15848445-15848518)
chr2 (178-247)||(36382487-36382556)
chr2 (170-247)||(36755440-36755517)
chr2 (170-246)||(6658199-6658275)
chr2 (170-246)||(25230102-25230178)
chr2 (177-248)||(11163382-11163453)
chr2 (177-247)||(15848087-15848157)
chr2 (170-244)||(36480070-36480144)
chr2 (186-247)||(2318878-2318939)
chr2 (186-247)||(3555249-3555310)
chr2 (179-248)||(6657876-6657945)
chr2 (170-235)||(13692572-13692637)
chr2 (170-242)||(44713799-44713871)
chr2 (175-246)||(10713080-10713151)
chr2 (175-246)||(30729621-30729692)
chr2 (177-248)||(36382159-36382230)
chr2 (170-248)||(34448147-34448225)
chr2 (179-244)||(36479719-36479785)
chr2 (177-246)||(16099055-16099124)
chr2 (170-247)||(45556399-45556476)
chr2 (170-246)||(11163054-11163130)
chr2 (170-246)||(21370554-21370630)
chr2 (177-244)||(10712725-10712792)
chr2 (189-248)||(44714132-44714190)
chr2 (180-245)||(2318160-2318224)
chr2 (194-247)||(34447812-34447865)
chr2 (170-246)||(9076419-9076495)
chr2 (201-243)||(37895730-37895772)
chr2 (177-246)||(22051352-22051421)
chr2 (170-246)||(3556361-3556437)
chr2 (194-246)||(6307094-6307145)
chr2 (199-246)||(39423515-39423562)
chr2 (177-247)||(8710825-8710895)
chr2 (189-227)||(14900821-14900859)
chr2 (189-239)||(39498317-39498367)
chr2 (177-247)||(43742035-43742105)
chr2 (189-245)||(36755094-36755150)
[»] chr1 (78 HSPs)
chr1 (175-246)||(24009575-24009646)
chr1 (170-248)||(36694280-36694358)
chr1 (170-248)||(36710381-36710459)
chr1 (175-248)||(13914066-13914139)
chr1 (170-246)||(47999123-47999199)
chr1 (170-248)||(30711679-30711757)
chr1 (170-248)||(37578190-37578268)
chr1 (170-248)||(43759174-43759252)
chr1 (170-247)||(5735063-5735140)
chr1 (170-247)||(6367914-6367991)
chr1 (170-247)||(17661851-17661927)
chr1 (175-248)||(42533022-42533095)
chr1 (170-239)||(49723078-49723147)
chr1 (170-246)||(46899061-46899137)
chr1 (177-248)||(23209686-23209757)
chr1 (179-246)||(34464449-34464516)
chr1 (175-246)||(34850422-34850493)
chr1 (175-245)||(35152687-35152757)
chr1 (177-246)||(6367562-6367631)
chr1 (179-248)||(34464810-34464879)
chr1 (170-247)||(48779471-48779548)
chr1 (170-246)||(183221-183297)
chr1 (170-246)||(26024744-26024820)
chr1 (175-247)||(40772816-40772888)
chr1 (177-248)||(19017988-19018059)
chr1 (175-246)||(34849011-34849082)
chr1 (177-248)||(35473629-35473700)
chr1 (175-245)||(13300261-13300331)
chr1 (170-248)||(19322890-19322968)
chr1 (170-247)||(1103813-1103890)
chr1 (175-248)||(5734008-5734080)
chr1 (170-243)||(19323244-19323317)
chr1 (199-248)||(19515817-19515866)
chr1 (177-246)||(40772507-40772576)
chr1 (177-245)||(13914426-13914494)
chr1 (175-243)||(40435348-40435416)
chr1 (176-247)||(7820953-7821024)
chr1 (175-246)||(14879315-14879386)
chr1 (171-246)||(31197065-31197140)
chr1 (177-248)||(41098731-41098802)
chr1 (170-248)||(1841810-1841888)
chr1 (175-245)||(4960541-4960611)
chr1 (189-247)||(25647883-25647941)
chr1 (194-248)||(35152341-35152395)
chr1 (177-243)||(46163033-46163099)
chr1 (170-243)||(40210373-40210446)
chr1 (170-247)||(46899952-46900029)
chr1 (179-248)||(47999453-47999522)
chr1 (199-247)||(17662231-17662279)
chr1 (175-243)||(17692542-17692610)
chr1 (199-247)||(19017628-19017676)
chr1 (199-243)||(24009922-24009966)
chr1 (170-246)||(32917612-32917688)
chr1 (199-247)||(37578573-37578621)
chr1 (170-242)||(41099085-41099157)
chr1 (199-246)||(6518177-6518224)
chr1 (199-246)||(30711327-30711374)
chr1 (177-248)||(36694607-36694678)
chr1 (177-248)||(36710708-36710779)
chr1 (169-248)||(51015631-51015710)
chr1 (177-247)||(26024422-26024492)
chr1 (170-247)||(7821306-7821382)
chr1 (199-244)||(42248475-42248520)
chr1 (177-248)||(183550-183622)
chr1 (175-247)||(17691218-17691290)
chr1 (199-243)||(23209365-23209408)
chr1 (170-244)||(40439541-40439615)
chr1 (179-237)||(14878980-14879038)
chr1 (177-231)||(32917275-32917329)
chr1 (169-247)||(51019700-51019778)
chr1 (199-244)||(40210751-40210796)
chr1 (199-247)||(7231630-7231678)
chr1 (170-241)||(4960861-4960932)
chr1 (177-248)||(40714800-40714871)
chr1 (200-242)||(1103463-1103505)
chr1 (199-248)||(44522145-44522194)
chr1 (177-246)||(49955347-49955416)
chr1 (345-381)||(52414820-52414856)
[»] chr8 (64 HSPs)
chr8 (170-248)||(33357496-33357574)
chr8 (170-248)||(1425051-1425129)
chr8 (177-247)||(13186059-13186129)
chr8 (170-248)||(13186411-13186489)
chr8 (170-244)||(40317966-40318040)
chr8 (170-247)||(8316652-8316729)
chr8 (170-247)||(20386782-20386859)
chr8 (170-246)||(20385568-20385644)
chr8 (170-246)||(38956024-38956100)
chr8 (175-246)||(30459371-30459442)
chr8 (175-246)||(31608870-31608941)
chr8 (170-248)||(23663543-23663621)
chr8 (177-247)||(40318323-40318393)
chr8 (170-243)||(38862915-38862988)
chr8 (177-246)||(39071676-39071745)
chr8 (179-247)||(22915719-22915787)
chr8 (170-246)||(34685610-34685685)
chr8 (170-248)||(4994655-4994733)
chr8 (170-248)||(7295279-7295357)
chr8 (177-247)||(8316947-8317017)
chr8 (170-248)||(12198948-12199026)
chr8 (170-244)||(12272920-12272994)
chr8 (170-248)||(12443376-12443454)
chr8 (170-244)||(34177322-34177396)
chr8 (199-248)||(16388581-16388630)
chr8 (175-248)||(34060487-34060560)
chr8 (170-247)||(36928828-36928905)
chr8 (175-247)||(31608526-31608597)
chr8 (175-247)||(34061685-34061757)
chr8 (187-246)||(4406029-4406088)
chr8 (169-248)||(7313356-7313435)
chr8 (177-248)||(23663873-23663944)
chr8 (177-248)||(23698603-23698674)
chr8 (177-247)||(4995016-4995085)
chr8 (176-246)||(5960046-5960116)
chr8 (186-248)||(39072009-39072071)
chr8 (189-246)||(16388897-16388954)
chr8 (177-246)||(38955703-38955772)
chr8 (189-248)||(12273224-12273283)
chr8 (169-247)||(7306398-7306476)
chr8 (189-247)||(10749879-10749937)
chr8 (202-248)||(36186448-36186494)
chr8 (170-246)||(23698308-23698385)
chr8 (170-246)||(2534695-2534771)
chr8 (170-242)||(36186105-36186177)
chr8 (194-246)||(42803594-42803646)
chr8 (170-245)||(30712069-30712143)
chr8 (170-245)||(30719846-30719920)
chr8 (194-244)||(9065667-9065717)
chr8 (170-236)||(22915399-22915465)
chr8 (180-246)||(38862618-38862684)
chr8 (175-244)||(12199263-12199332)
chr8 (175-244)||(12443691-12443760)
chr8 (199-248)||(34176443-34176491)
chr8 (177-245)||(1425381-1425448)
chr8 (199-247)||(9065751-9065799)
chr8 (170-245)||(7294103-7294177)
chr8 (177-248)||(7983426-7983497)
chr8 (207-245)||(4405700-4405738)
chr8 (189-246)||(2535921-2535978)
chr8 (199-248)||(11761838-11761887)
chr8 (199-248)||(35756582-35756630)
chr8 (199-240)||(43181533-43181574)
chr8 (177-237)||(25124572-25124632)
[»] chr6 (37 HSPs)
chr6 (170-248)||(12080988-12081066)
chr6 (170-248)||(30726111-30726189)
chr6 (170-248)||(33647303-33647381)
chr6 (170-247)||(3059608-3059685)
chr6 (175-248)||(8090284-8090357)
chr6 (175-247)||(33517891-33517963)
chr6 (170-247)||(21627712-21627789)
chr6 (170-248)||(681080-681158)
chr6 (170-244)||(11434804-11434878)
chr6 (170-248)||(20651008-20651086)
chr6 (175-246)||(12407508-12407579)
chr6 (177-248)||(30337447-30337518)
chr6 (170-248)||(13379834-13379912)
chr6 (177-247)||(21628072-21628142)
chr6 (170-248)||(30804213-30804291)
chr6 (177-243)||(33517537-33517603)
chr6 (170-247)||(679865-679942)
chr6 (175-248)||(12408528-12408601)
chr6 (194-246)||(15115339-15115391)
chr6 (170-246)||(30337770-30337846)
chr6 (177-248)||(3059255-3059326)
chr6 (177-248)||(26463177-26463248)
chr6 (170-247)||(11393156-11393233)
chr6 (170-247)||(17734195-17734272)
chr6 (170-247)||(20651999-20652076)
chr6 (170-246)||(15116584-15116660)
chr6 (199-244)||(12080638-12080683)
chr6 (177-246)||(30725760-30725828)
chr6 (177-245)||(17734522-17734590)
chr6 (199-243)||(22617886-22617930)
chr6 (187-246)||(26464568-26464627)
chr6 (194-247)||(8089442-8089495)
chr6 (199-244)||(8418417-8418461)
chr6 (179-248)||(29810797-29810866)
chr6 (199-248)||(30803859-30803908)
chr6 (177-248)||(28498384-28498455)
chr6 (192-248)||(15913920-15913976)
[»] chr5 (79 HSPs)
chr5 (170-248)||(14194421-14194499)
chr5 (177-247)||(6150453-6150523)
chr5 (186-248)||(6150788-6150850)
chr5 (170-244)||(19892310-19892384)
chr5 (170-248)||(28770867-28770945)
chr5 (170-247)||(11762069-11762146)
chr5 (170-247)||(16083295-16083372)
chr5 (170-247)||(42265734-42265811)
chr5 (170-246)||(5024019-5024095)
chr5 (170-246)||(17202751-17202827)
chr5 (170-246)||(27587467-27587543)
chr5 (170-245)||(19517959-19518034)
chr5 (170-248)||(28269420-28269498)
chr5 (170-248)||(29646360-29646438)
chr5 (170-244)||(35512466-35512540)
chr5 (170-247)||(3528872-3528949)
chr5 (170-243)||(11047789-11047861)
chr5 (170-243)||(11740690-11740763)
chr5 (180-245)||(18247087-18247152)
chr5 (170-247)||(18247428-18247505)
chr5 (170-247)||(32242594-32242670)
chr5 (170-247)||(39453651-39453728)
chr5 (180-248)||(5993887-5993955)
chr5 (170-245)||(16156856-16156931)
chr5 (177-248)||(20814494-20814565)
chr5 (189-248)||(38475370-38475429)
chr5 (176-243)||(43159172-43159239)
chr5 (177-247)||(11761748-11761818)
chr5 (194-247)||(16157231-16157284)
chr5 (199-248)||(20840531-20840580)
chr5 (177-246)||(27587148-27587217)
chr5 (170-246)||(186771-186847)
chr5 (179-247)||(18670201-18670269)
chr5 (170-241)||(8322756-8322827)
chr5 (179-246)||(28771199-28771266)
chr5 (177-248)||(35512146-35512217)
chr5 (170-245)||(38442419-38442494)
chr5 (177-244)||(39453302-39453369)
chr5 (177-243)||(5024377-5024443)
chr5 (170-247)||(6301895-6301970)
chr5 (170-248)||(13963181-13963259)
chr5 (170-248)||(20814134-20814211)
chr5 (170-248)||(24547175-24547253)
chr5 (177-247)||(24547484-24547554)
chr5 (175-245)||(35920229-35920299)
chr5 (170-248)||(37991197-37991275)
chr5 (189-246)||(3529213-3529270)
chr5 (199-248)||(20840818-20840867)
chr5 (170-243)||(21257513-21257586)
chr5 (199-248)||(32242240-32242289)
chr5 (177-246)||(35920543-35920612)
chr5 (179-243)||(13362589-13362653)
chr5 (170-246)||(38475033-38475109)
chr5 (170-233)||(5994241-5994304)
chr5 (189-248)||(13962862-13962921)
chr5 (170-247)||(6301545-6301619)
chr5 (177-247)||(17202398-17202468)
chr5 (199-244)||(19892689-19892734)
chr5 (175-243)||(5835783-5835851)
chr5 (199-247)||(21265523-21265571)
chr5 (199-243)||(27937380-27937424)
chr5 (200-248)||(28269762-28269809)
chr5 (200-244)||(37992670-37992714)
chr5 (170-245)||(11741869-11741944)
chr5 (177-248)||(14194782-14194852)
chr5 (189-244)||(16082979-16083034)
chr5 (213-248)||(27937053-27937088)
chr5 (175-240)||(5256369-5256433)
chr5 (186-247)||(5835622-5835683)
chr5 (175-243)||(18670507-18670575)
chr5 (213-248)||(13362248-13362283)
chr5 (216-247)||(42265890-42265921)
chr5 (170-243)||(10684290-10684362)
chr5 (214-247)||(11047437-11047470)
chr5 (211-248)||(35855624-35855661)
chr5 (199-247)||(186419-186466)
chr5 (170-222)||(21265167-21265219)
chr5 (199-239)||(24204978-24205018)
chr5 (171-247)||(40150167-40150243)
[»] chr4 (75 HSPs)
chr4 (170-248)||(10781836-10781914)
chr4 (170-248)||(51692871-51692949)
chr4 (170-248)||(24349672-24349750)
chr4 (177-247)||(46661273-46661343)
chr4 (170-248)||(52909605-52909683)
chr4 (170-247)||(1179152-1179229)
chr4 (170-247)||(10780712-10780789)
chr4 (170-247)||(10974321-10974398)
chr4 (170-243)||(11108192-11108265)
chr4 (170-246)||(18831669-18831745)
chr4 (177-247)||(5368946-5369016)
chr4 (170-248)||(24411700-24411778)
chr4 (170-248)||(35027996-35028074)
chr4 (170-248)||(36008842-36008920)
chr4 (170-247)||(13058334-13058411)
chr4 (170-247)||(24350784-24350861)
chr4 (170-246)||(147319-147395)
chr4 (170-246)||(7452155-7452231)
chr4 (179-247)||(23613308-23613376)
chr4 (170-245)||(15507674-15507749)
chr4 (175-246)||(23613635-23613706)
chr4 (177-248)||(34765739-34765810)
chr4 (176-243)||(54086698-54086765)
chr4 (170-248)||(148107-148185)
chr4 (180-246)||(14802097-14802163)
chr4 (177-247)||(24711110-24711180)
chr4 (190-248)||(24711452-24711510)
chr4 (170-248)||(34765378-34765456)
chr4 (170-248)||(50418666-50418744)
chr4 (170-248)||(55867466-55867544)
chr4 (170-243)||(37248557-37248630)
chr4 (170-243)||(43155532-43155605)
chr4 (175-247)||(1178056-1178127)
chr4 (175-247)||(35028355-35028427)
chr4 (176-244)||(44967071-44967139)
chr4 (189-248)||(7451832-7451891)
chr4 (177-248)||(13058035-13058106)
chr4 (177-244)||(15508032-15508098)
chr4 (189-248)||(39539289-39539348)
chr4 (177-248)||(44967397-44967468)
chr4 (170-245)||(49879208-49879283)
chr4 (177-248)||(50418996-50419067)
chr4 (177-248)||(51692551-51692622)
chr4 (176-247)||(53129505-53129576)
chr4 (177-247)||(14801735-14801805)
chr4 (177-247)||(18831348-18831418)
chr4 (170-247)||(17355924-17356001)
chr4 (179-244)||(17356283-17356348)
chr4 (186-247)||(48528484-48528545)
chr4 (176-244)||(16006151-16006219)
chr4 (199-247)||(53129887-53129935)
chr4 (175-246)||(55866111-55866180)
chr4 (177-244)||(37248238-37248305)
chr4 (199-248)||(35508621-35508670)
chr4 (170-243)||(37976156-37976229)
chr4 (199-248)||(37976534-37976583)
chr4 (199-244)||(53701814-53701859)
chr4 (177-245)||(52909254-52909322)
chr4 (189-244)||(24411360-24411415)
chr4 (189-248)||(43155867-43155926)
chr4 (189-244)||(54087066-54087121)
chr4 (189-248)||(54435468-54435527)
chr4 (177-247)||(40387466-40387536)
chr4 (177-247)||(52573585-52573655)
chr4 (172-248)||(36009167-36009244)
chr4 (186-247)||(53702167-53702227)
chr4 (214-247)||(54713615-54713648)
chr4 (170-246)||(5369219-5369295)
chr4 (199-247)||(11448110-11448158)
chr4 (350-386)||(35232532-35232568)
chr4 (177-248)||(27068908-27068979)
chr4 (189-227)||(27934551-27934589)
chr4 (199-248)||(41583612-41583661)
chr4 (201-238)||(49879559-49879596)
chr4 (346-378)||(37210121-37210153)
[»] chr3 (52 HSPs)
chr3 (175-245)||(35712045-35712115)
chr3 (170-248)||(40758462-40758540)
chr3 (177-246)||(40758147-40758216)
chr3 (170-247)||(33689381-33689457)
chr3 (170-246)||(3850479-3850555)
chr3 (170-246)||(36418040-36418116)
chr3 (177-248)||(33689738-33689809)
chr3 (175-242)||(41558239-41558306)
chr3 (189-248)||(42342789-42342848)
chr3 (170-245)||(53757075-53757150)
chr3 (170-248)||(19740921-19740999)
chr3 (170-244)||(43384635-43384709)
chr3 (169-247)||(53856408-53856486)
chr3 (199-244)||(9292245-9292290)
chr3 (177-246)||(9294317-9294386)
chr3 (175-248)||(23458336-23458409)
chr3 (199-248)||(40033837-40033886)
chr3 (175-248)||(41558006-41558079)
chr3 (180-245)||(51994248-51994313)
chr3 (179-247)||(19741253-19741321)
chr3 (199-247)||(26463967-26464015)
chr3 (175-239)||(40033526-40033590)
chr3 (176-248)||(51993962-51994034)
chr3 (177-248)||(2796177-2796248)
chr3 (180-247)||(2796459-2796526)
chr3 (170-237)||(23457988-23458055)
chr3 (175-240)||(9368658-9368723)
chr3 (189-246)||(34142589-34142646)
chr3 (194-243)||(36150530-36150579)
chr3 (170-243)||(36417691-36417764)
chr3 (175-243)||(26463635-26463703)
chr3 (179-243)||(42343092-42343156)
chr3 (170-248)||(9367739-9367817)
chr3 (207-245)||(41989575-41989613)
chr3 (170-247)||(3849030-3849107)
chr3 (170-243)||(46475133-46475205)
chr3 (169-246)||(53856015-53856092)
chr3 (199-243)||(46474818-46474862)
chr3 (199-243)||(53756747-53756791)
chr3 (177-247)||(43384282-43384352)
chr3 (179-248)||(13948778-13948847)
chr3 (170-226)||(42855657-42855713)
chr3 (175-243)||(55052295-55052363)
chr3 (189-248)||(1079592-1079651)
chr3 (178-245)||(23276343-23276410)
chr3 (177-247)||(3469199-3469269)
chr3 (170-243)||(21783403-21783474)
chr3 (199-248)||(23272822-23272871)
chr3 (175-248)||(41988582-41988655)
chr3 (189-246)||(55052619-55052675)
chr3 (199-247)||(25107212-25107260)
chr3 (177-237)||(29685950-29686010)
[»] scaffold0707 (1 HSPs)
scaffold0707 (175-247)||(6436-6508)
[»] scaffold0031 (2 HSPs)
scaffold0031 (177-246)||(68965-69034)
scaffold0031 (170-246)||(69317-69393)
[»] scaffold0075 (2 HSPs)
scaffold0075 (170-248)||(14427-14505)
scaffold0075 (199-246)||(14771-14818)
[»] scaffold0005 (2 HSPs)
scaffold0005 (180-246)||(37564-37630)
scaffold0005 (177-247)||(37922-37992)
[»] scaffold0020 (2 HSPs)
scaffold0020 (170-243)||(139993-140066)
scaffold0020 (177-248)||(139670-139741)
[»] scaffold0775 (1 HSPs)
scaffold0775 (170-248)||(4960-5038)
[»] scaffold0007 (2 HSPs)
scaffold0007 (179-248)||(1767-1836)
scaffold0007 (194-247)||(2117-2170)
[»] scaffold0295 (1 HSPs)
scaffold0295 (199-247)||(2510-2558)
[»] scaffold0128 (1 HSPs)
scaffold0128 (175-243)||(19860-19928)
[»] scaffold0771 (1 HSPs)
scaffold0771 (179-248)||(918-987)
[»] scaffold0328 (1 HSPs)
scaffold0328 (189-248)||(11509-11568)
[»] scaffold1130 (1 HSPs)
scaffold1130 (346-383)||(290-327)


Alignment Details
Target: chr7 (Bit Score: 154; Significance: 2e-81; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 25 - 248
Target Start/End: Complemental strand, 28105718 - 28105499
Alignment:
Q  25 gaaggaacatgtgtttttttatttttatttgagtggggtgttggaattaggctatannnnnnnnnnaggcccgtgcattttagaggccgggcttgattga 124  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  28105718 gaaggaacatgtgtttttta--ttttatttgagtggggtgttggaattaggctatatttttttt--aggcccgtgcattttagaggccgggcttgattga 28105623  T
Q  125 gctgtttaaacttccccaaggccgggcttgactgagctattcactgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaa 224  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  28105622 gctgtttacacttccccaaggccgggcttgactgatctattcactgttttcaaggattagtgaatacagggacaaatttttaaacgacccttaattgcaa 28105523  T
Q  225 ggatgaaatacatatttaagccta 248  Q
    ||||||||||||||||||||||||    
T  28105522 ggatgaaatacatatttaagccta 28105499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 344 - 466
Target Start/End: Complemental strand, 28105435 - 28105313
Alignment:
Q  344 ctaaaagacacttaaaaaggaacggaggaattattatttaaataattaatatttttcttatacaccaaacatgatctcacgtcattatttgttgtttctt 443  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28105435 ctaaaagacatttaaaaaggaacggaggaattattatttaaataattaatatttttcttatacaccaaacatgatctcacatcattatttgttgtttctt 28105336  T
Q  444 gcttcaatcccacacgtcctatt 466  Q
    |||||||||||||||||||||||    
T  28105335 gcttcaatcccacacgtcctatt 28105313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 24389137 - 24389214
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24389137 gtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 24389214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 45010961 - 45011034
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45010961 caaggattagcgaatacatgaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 45011034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 17102348 - 17102419
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  17102348 aggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 17102419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 42019673 - 42019598
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| |||||||||| |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  42019673 gtttgcaaggattagcgaatacatggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagc 42019598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 6253791 - 6253869
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6253791 tgtttgcaaggattagcgaatacaaggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 6253869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 17886842 - 17886920
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||  |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17886842 gtttgcaaggattaacgaatacatggatcaatttttaaatgatccctaattgcaaggatgaaatacatatttaagccta 17886920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 48788879 - 48788801
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  48788879 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaagaatgaaatacatatttaagccta 48788801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 5457264 - 5457337
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||  ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5457264 caaggattaacgaatacaaggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 5457337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 10936146 - 10936223
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  10936146 gtttgcaaggattagcgaatacaaggaccaatttttaaacaacccctaattgcaaggatgaaatacatatttaagcct 10936223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 27396705 - 27396628
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| |||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  27396705 gtttgcaaggattagcgaatacatggaccaatttttaaacggcccctaattacaaggatgaaatacatatttaagcct 27396628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 40380036 - 40380112
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||| | |||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  40380036 gtttgcaaggattggcgaatacatggaccaatttttaaacgactcctaattgcaaggatgaaatacatatttaagcc 40380112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 43123251 - 43123175
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||||||||||| |||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  43123251 gtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaattgcagggacgaaatacatatttaagcc 43123175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 27396954 - 27397025
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27396954 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 27397025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 37657194 - 37657265
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||  ||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37657194 caaggattaacgaatacagggatcaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 37657265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 27992060 - 27992133
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  27992060 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 27992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 28469086 - 28469009
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||| |||||| ||||| | |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28469086 gtttgcaaagattagcgaatataaggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 28469009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 32298853 - 32298776
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| | ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  32298853 gtttgcaaggattagcgaatacagggaccagtttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 32298776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 47945433 - 47945356
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||||| || ||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  47945433 gtttgcaaggattagcgaatacatgaaccaatttttaaacgatccccaattgcaacgatgaaatacatatttgagcct 47945356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 47950863 - 47950786
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||||| || ||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  47950863 gtttgcaaggattagcgaatacatgaaccaatttttaaacgatccccaattgcaacgatgaaatacatatttgagcct 47950786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 2640249 - 2640177
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| ||||||| | || ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  2640249 caaggattagcgaatacaggtaccaatttttaaacgacccctaattgtaaggatgaaatacatatttaagcct 2640177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 20426689 - 20426760
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| ||||||| |||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  20426689 aggattagcgaatacagggaccaatttttaaacgacctctaattgcagggatgaaatacatatttaagccta 20426760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 28469379 - 28469438
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28469379 tacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 28469438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 42362521 - 42362450
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||  ||||||| |||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  42362521 caaggattaacgaatacaaggaccaatttttaaacgacacctaattgcaaggatgaaatacatatttaagcc 42362450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 17102089 - 17102019
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  17102089 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 17102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 40379840 - 40379774
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatattt 241  Q
    |||||||||| |||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  40379840 caaggattagcgaatacaaagaccaatttttaaacgacccctaattgcaaggatgaaatacatattt 40379774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 10935863 - 10935794
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  10935863 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacacatttaagcc 10935794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 42731488 - 42731419
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  42731488 aggattagcgattacaaggaccaatttttaaacgacccctaattgcaaggatgagatacatatttaagcc 42731419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 6253540 - 6253472
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  6253540 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagc 6253472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 13386099 - 13386175
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||| | |||| ||||||||||||| ||||||||||||| || |||||||||||||||||    
T  13386099 gtttgcaaggattagcgaatatagggaccaatttttaaacgacccctaattgcaagtattaaatacatatttaagcc 13386175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 18670220 - 18670291
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||  ||||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||||    
T  18670220 caaggattaacgaatacagggaccattttttaaacgacccctaattgcaaggattaaatacatatttaagcc 18670291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 6571070 - 6571012
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6571070 tacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 6571012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 23181355 - 23181421
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||| || ||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  23181355 gattagcgattacatggaccaatatttaaacgacccctaattgcaatgatgaaatacatatttaagc 23181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 37656921 - 37656855
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||| || ||||  ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  37656921 aggattagcgattacagagaccaatttttaaacgattcctaattgcaaggatgaaatacatatttaa 37656855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 24388886 - 24388821
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||||| |||||||  ||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  24388886 gattagcgaatacagagaccaatttttaaacgacccataattgcaaggatgaaatacatatttaag 24388821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 42731800 - 42731849
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  42731800 aatttttaaacgacccctaattacaaggatgaaatacatatttaagccta 42731849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 22871634 - 22871706
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||  | |||| |||| |||||||||| || |||||||||||||||| ||||||||||||||||||    
T  22871634 caaggattagctattacagggaccaatttttaaatgacccctaattgcaaggatcaaatacatatttaagcct 22871706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 29141557 - 29141605
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  29141557 aatttttaaacgacctctaattgcaaggatgaaatacatatttaagcct 29141605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 32299064 - 32299132
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||| || |||| |||| |||||||||||||  ||||||||||||||| ||||||||||||||||    
T  32299064 aggattagcgattacagggaccaatttttaaacgactcctaattgcaaggatcaaatacatatttaagc 32299132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 34799509 - 34799585
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||| ||||||||||||| | || |||| ||||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  34799509 tgtttgcaaggattagtgattgcaaggaccaatttttaaacgacccctatttgcagggatcaaatacatatttaagc 34799585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 20425535 - 20425476
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||| || |||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  20425535 tacatgaaccaatttttaaatgatccctaattgcagggatgaattacatatttaagccta 20425476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 19204546 - 19204488
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||| ||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  19204546 tacagggaccaatttttaaacgacccctaatttcaaggatcaaatacatatttaagcct 19204488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 27991808 - 27991738
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||  ||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  27991808 aggattagcgattacagggatcaatttctaaacgacccctaattgcaaggatcaaatacatatttaagcct 27991738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 34793981 - 34793903
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||| ||||||||| ||| | || |||| ||||||||||||| ||||| ||||| |||| ||||||||||||||||||    
T  34793981 tgtttgcaaggattattgattgcaaggaccaatttttaaacgacccctatttgcagggataaaatacatatttaagcct 34793903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 29144363 - 29144412
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  29144363 aatttttaaacgacccctaattgcagggacgaaatacatatttaagccta 29144412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 1960226 - 1960302
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||| ||||||||||||||| || |||| || |||||| ||| ||||| ||||| |||| ||||||||||||||||    
T  1960226 tgtttgcaaggattagtgaatgcaaggaccaaattttaagcgacccctatttgcagggatcaaatacatatttaagc 1960302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 30127488 - 30127440
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  30127488 aatttttaaacgatccctaattgcagggattgaatacatatttaagcct 30127440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 42019978 - 42020022
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    ||||||||||| | |||||||||||||||||||||||||||||||    
T  42019978 aatttttaaacaacccctaattgcaaggatgaaatacatatttaa 42020022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 17885704 - 17885649
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaag 225  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  17885704 gtttgcaaggattagagaatacagggaccaatttttaaacgacccctaattgcaag 17885649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 32053189 - 32053142
Alignment:
Q  200 atttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||||| || ||||| ||||||||||||||||||||||||||    
T  32053189 atttttaaacgacccataattacaaggatgaaatacatatttaagcct 32053142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 33808394 - 33808323
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||| |||||||  ||| |||||||||||||  | ||||| |||| ||||||||||||||||||||    
T  33808394 caaggattagcgaatacagagaccaatttttaaacgacgcgtaatttcaagaatgaaatacatatttaagcc 33808323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 19204810 - 19204884
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||||||||| || |||||| || ||||||||||| | ||||||||| |||||| |||| ||||||||||    
T  19204810 gtttgcaaggattagcgattacatgaaccaatttttaaaccacccctaattgtaaggatcaaattcatatttaag 19204884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 47946856 - 47946901
Alignment:
Q  200 atttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  47946856 atttttaaacgattcctaattacaaggataaaatacatatttaagc 47946901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 47952286 - 47952331
Alignment:
Q  200 atttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  47952286 atttttaaacgattcctaattacaaggataaaatacatatttaagc 47952331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 2640559 - 2640607
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacat-atttaagcc 246  Q
    ||||||||||||| ||||||||  ||||||||||||||| |||||||||    
T  2640559 aatttttaaacgacccctaattataaggatgaaatacataatttaagcc 2640607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 5455898 - 5455854
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaat 219  Q
    |||||||||| ||||||| |||| ||||||||||||| |||||||    
T  5455898 caaggattagagaatacagggaccaatttttaaacgacccctaat 5455854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 28105454 - 28105426
Alignment:
Q  292 ctatgcttctaattgcttactaaaagaca 320  Q
    |||||||||||||||||||||||||||||    
T  28105454 ctatgcttctaattgcttactaaaagaca 28105426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 43266626 - 43266694
Alignment:
Q  180 attagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||| || ||||||||| |||||||||| ||  |||||||||||||| |||| ||||  |||||||||    
T  43266626 attagcgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 43266694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 39498631 - 39498709
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39498631 gtttgcaaggattagcgaatacatggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagccta 39498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 6588759 - 6588686
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  6588759 gtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 6588686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 16099376 - 16099453
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  16099376 gtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 16099453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 37895423 - 37895346
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  37895423 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 37895346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 44044190 - 44044113
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||||||||||||| |||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||    
T  44044190 gttttcaaggattagtgaatacagggaccaatttttaaaccacccctaattgcagggatcaaatacatatttaagcct 44044113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 25231207 - 25231278
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  25231207 aggattagcgaatacatggaccaatttttaaacgacccctaattgcagggattaaatacatatttaagccta 25231278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 39423867 - 39423945
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||| | |||  ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39423867 gtttgcaaggattagcgaatatagggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 39423945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 44045354 - 44045432
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  44045354 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaagccta 44045432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 45556181 - 45556111
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45556181 aggattagcgattacagggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagcct 45556111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 15848445 - 15848518
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| ||||||||  || ||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  15848445 caaggattagcgaatacataaaccaatttttaaacgacccctaattgcaaggatgaaatacttatttaagccta 15848518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 36382487 - 36382556
Alignment:
Q  178 ggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||| ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  36382487 ggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 36382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 36755440 - 36755517
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| || || | |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36755440 gtttgcaaggattagcgattatagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 36755517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 6658199 - 6658275
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| | |||||||||||||| |||||||||||||||||    
T  6658199 gtttgcaaggattagcgaatacagggaccaatttttaaacgacctctaattgcaaggatcaaatacatatttaagcc 6658275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 25230178 - 25230102
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  25230178 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcagggattaaatacatatttaagcc 25230102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 11163382 - 11163453
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  11163382 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 11163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 15848157 - 15848087
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  15848157 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatataagcct 15848087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 36480070 - 36480144
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||||||||| ||||| | |||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  36480070 gtttgcaaggattagcgaatatagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaag 36480144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 2318878 - 2318939
Alignment:
Q  186 gaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  2318878 gaatacatgaaccaatttttaaacgacccctaattggaaggatgaaatacatatttaagcct 2318939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 3555310 - 3555249
Alignment:
Q  186 gaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3555310 gaatacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 3555249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 6657945 - 6657876
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||| |||| |||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  6657945 gattagtgattacagggaccaatttttaaacgaccccaaattgcaaggatcaaatacatatttaagccta 6657876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 13692572 - 13692637
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatac 235  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  13692572 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatac 13692637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 44713871 - 44713799
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatattta 242  Q
    |||| |||||||||| |||||||| ||| ||||||||||||| || ||||| |||||||||||||||||||||    
T  44713871 gtttgcaaggattagcgaatacattgaccaatttttaaacgacccttaattacaaggatgaaatacatattta 44713799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 10713080 - 10713151
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||| |||||||   || ||||||||||||| || |||||||||||||||||||||||||||||||    
T  10713080 caaggattagcgaatacagaaaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcc 10713151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 30729692 - 30729621
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||| ||||| | |||| |||||||||||||   ||||||||||||||||||||||||||||||||    
T  30729692 caaggattagcgaatatagggaccaatttttaaacgacgtctaattgcaaggatgaaatacatatttaagcc 30729621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 36382230 - 36382159
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || || | |||| ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  36382230 aggattagcgattatagggaccaatttttaaacgaaccctaattgcaaggatgaaatacatacttaagccta 36382159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 34448147 - 34448225
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||  ||||| | |||| ||||||||||| | ||||||||||||||||||||||||| ||||||||||    
T  34448147 gtttgcaaggattaacgaatatagggaccaatttttaaacaacccctaattgcaaggatgaaatacatgtttaagccta 34448225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 36479785 - 36479719
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgc-aaggatgaaatacatatttaag 244  Q
    |||||| || ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  36479785 gattagcgattacatggaccaatttttaaacgacccctaattgcaaaggatgaaatacatatttaag 36479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 16099124 - 16099055
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||||| |||| |||| |||||||||| || ||||||||||||| || |||||||||||||||||    
T  16099124 aggattagtgattacagggaccaatttttaaatgacccctaattgcaagaatcaaatacatatttaagcc 16099055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 45556399 - 45556476
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||| |||||| |||||||  ||| ||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  45556399 gtttgcaaagattagcgaatacagcgaccaatttttaaacgacccctaattacaaggatcaaatacatatttaagcct 45556476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 11163130 - 11163054
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |  ||||||||| ||| |||||||||||||||||    
T  11163130 gtttgcaaggattagcgaatacagggaccaatttttaaacgacctttaattgcaaagatcaaatacatatttaagcc 11163054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 21370554 - 21370630
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||  |||||||||||  ||||||||||||| |  ||||| |||||||||||||||||||||||||    
T  21370554 gtttgcaaggattaacgaatacatggatcaatttttaaacgacctataattacaaggatgaaatacatatttaagcc 21370630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 10712792 - 10712725
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    ||||||| ||| || | |||| ||||||||||||| |||||||||||||||||||||||||| |||||    
T  10712792 aggattaatgattataaggaccaatttttaaacgaaccctaattgcaaggatgaaatacatacttaag 10712725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 44714132 - 44714190
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||| ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  44714132 tacagggactaatttttaaacgacccctaattgcaaggatgaaa-acatatttaagccta 44714190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 2318224 - 2318160
Alignment:
Q  180 attagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||| || ||||| ||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  2318224 attagcgattacatagaccaatttttaaacta-ccctaattgcaaggatgaaatacatatttaagc 2318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 34447865 - 34447812
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| || |||||||| ||||||||||||||||||||||||||    
T  34447865 ggaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagcct 34447812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 9076419 - 9076495
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||  ||||||   ||| ||||||||||||| ||||||||||||| || |||||||||||||||||    
T  9076419 gtttgcaaggattaacgaatacggagaccaatttttaaacgacccctaattgcaagaataaaatacatatttaagcc 9076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 37895730 - 37895772
Alignment:
Q  201 tttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  37895730 tttttaaacgacccataattgcaaggatgaaatacatatttaa 37895772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 22051352 - 22051421
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || ||||  ||| ||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  22051352 aggattagcgattacagagactaatttttaaacaacctctaattgcaagaatgaaatacatatttaagcc 22051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 3556361 - 3556437
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||  || ||||  ||| ||||||||||||| || ||||||||||||||||||  |||||||||||    
T  3556361 gtttgcaaggattaacgattacagagaccaatttttaaacgacccataattgcaaggatgaaatgtatatttaagcc 3556437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 6307094 - 6307145
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| ||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  6307094 ggaccaatttttaaacgaccactaattgcaag-atgaaatacatatttaagcc 6307145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 39423562 - 39423515
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||||||| || ||||| |||||||||||||| ||||||||||    
T  39423562 aatttttaaacgacccgtaattacaaggatgaaatacgtatttaagcc 39423515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 8710825 - 8710895
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || ||||||||| |||||||||| ||  |||||||||||||| |||| ||||  ||||||||    
T  8710825 aggattagcgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 8710895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 14900821 - 14900859
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaagga 227  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  14900821 tacagggacaaatttttaaacgacccctaattgcaagga 14900859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 39498367 - 39498317
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatat 239  Q
    |||| |||| ||||||||||||| |||||||| ||||||| ||||||||||    
T  39498367 tacagggaccaatttttaaacgacccctaattacaaggatcaaatacatat 39498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 43742035 - 43742105
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||| ||| ||||||||| |||||||||| || | | ||||||| ||| |||||||||||| ||||||    
T  43742035 aggattaatgattacatggaccaatttttaaatgacctccaattgcagggacgaaatacatattgaagcct 43742105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 36755150 - 36755094
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||| || ||||||||||||| | ||||||  || ||||||||||||||||||||    
T  36755150 tacatgaaccaatttttaaacgacctctaattataaagatgaaatacatatttaagc 36755094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 24009646 - 24009575
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24009646 caaggattagtgaatacaaggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 24009575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 36694358 - 36694280
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36694358 gtttgcaaggattagcgaatacatagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 36694280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 36710459 - 36710381
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36710459 gtttgcaaggattagcgaatacatagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 36710381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 13914139 - 13914066
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  13914139 caaggattagcgaatacatggactaatttttaaacgacccctaattgcaaggatgaaatacacatttaagccta 13914066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 47999199 - 47999123
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  47999199 gtttgcaaggattagcgaatacagggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagcc 47999123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 30711679 - 30711757
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30711679 gtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 30711757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 37578268 - 37578190
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  37578268 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaaccta 37578190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 43759174 - 43759252
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43759174 gtttgcaaggattagcgaatacagggaccgatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 43759252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 5735063 - 5735140
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||||| || |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  5735063 gtttgcaaggattagcgaatacatgaaccaatttttaaacgattcctaattgcagggatgaaatacatatttaagcct 5735140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 6367914 - 6367991
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  6367914 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 6367991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 17661927 - 17661851
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17661927 gtttgcaaggattagcgaataca-ggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 17661851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 42533095 - 42533022
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  42533095 caaggattaacgaatacatggactaatttttaaacgacccctaattgcaaggatgaaatacatatttaaaccta 42533022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 49723078 - 49723147
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatat 239  Q
    |||| |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  49723078 gtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatat 49723147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 46899137 - 46899061
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||| ||||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  46899137 gtttgcaagaattagcgaatacatggaccaatttttaaacgacccctaattgcatggatgaaatacatatttaagcc 46899061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 23209686 - 23209757
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23209686 aggattagcgattacaaggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 23209757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 34464516 - 34464449
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34464516 gattagcgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 34464449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 34850422 - 34850493
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  34850422 caaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggattaaatacatatttaagcc 34850493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 35152687 - 35152757
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||||| |||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  35152687 caaggattagcgaatacagagactaatttttaaacgacccctaattgcaaggatgaaatacatatttaagc 35152757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 6367631 - 6367562
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6367631 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 6367562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 34464810 - 34464879
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||| || ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  34464810 gattagcgattacatggaccaatttttaaacaacccctaattgcaaggatgaaatacatatttaagccta 34464879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 48779471 - 48779548
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||||||||||  ||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  48779471 gtttgcaaggattagcaaatacatggactaatttttaagcgactcctaattgcaaggatgaaatacatatttaagcct 48779548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 183297 - 183221
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  183297 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgtaaggatcaaatacatatttaagcc 183221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 26024744 - 26024820
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| || |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26024744 gtttgcaaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 26024820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 40772816 - 40772888
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| ||||||| ||||  ||||| |||||| |||||||||||||||||||||||||||||||||||    
T  40772816 caaggattagcgaatacagggaccgattttcaaacgacccctaattgcaaggatgaaatacatatttaagcct 40772888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 19017988 - 19018059
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| |||||||||||| ||||||||||||| |  ||||||||||||| |||||||||||||||||||    
T  19017988 aggattagcgaatacatggaccaatttttaaacgacctgtaattgcaaggataaaatacatatttaagccta 19018059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 34849082 - 34849011
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||| ||||||| |||| |||||||||| || |||||||||||||||| |||||||||||||||||    
T  34849082 caaggattagcgaatacagggaccaatttttaaaagacccctaattgcaaggattaaatacatatttaagcc 34849011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 35473700 - 35473629
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  35473700 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggattaaatacatatttaagccta 35473629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 13300261 - 13300331
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||||||||||||||||  ||| |||||||||||||  ||||||||||| ||||||||||||||||||||    
T  13300261 caaggattagtgaatacagagaccaatttttaaacgacgcctaattgcaatgatgaaatacatatttaagc 13300331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 19322968 - 19322890
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||||| || ||||||||||||| || |||||  ||||||||||||||||||||||||||    
T  19322968 gtttgcaaggattagcgaatacatgaacgaatttttaaacgacccgtaattataaggatgaaatacatatttaagccta 19322890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 1103813 - 1103890
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |  ||||||||||||||||||| ||||||||||||    
T  1103813 gtttgcaaggattagcgaatacagggaccaatttttaaacgacctttaattgcaaggatgaaatatatatttaagcct 1103890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 5734080 - 5734008
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| || |||||| || ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  5734080 caaggattagcgattacatg-accaatttttaaacgacccctaattgcaaggacgaaatacatatttaagccta 5734008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 19323244 - 19323317
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| ||||||||| || |||||||||||||||| ||||| |||| |||||||||||||||||    
T  19323244 gtttgcaaggattagcgaatacatgaacgaatttttaaacgatccataattacaagaatgaaatacatatttaa 19323317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 19515866 - 19515817
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19515866 aatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 19515817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 40772576 - 40772507
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || |||| |||| ||||||||||||| || |||||||||||||||||||||||||||||||    
T  40772576 aggattagcgattacagggaccaatttttaaacgacccataattgcaaggatgaaatacatatttaagcc 40772507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 13914426 - 13914494
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||| || ||||||||| ||||||||||| | | |||||||||||||||||||||||||||||||    
T  13914426 aggattagcgattacatggaccaatttttaaacaacctctaattgcaaggatgaaatacatatttaagc 13914494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 40435416 - 40435348
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||||  |||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  40435416 caaggattaacgaatacaatgaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 40435348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 7821024 - 7820953
Alignment:
Q  176 aaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||| || |||| |||| |||| ||||| || |||||||||||||||||||||||||||||||||||    
T  7821024 aaggattagcgattacagggactaattattaaaggacccctaattgcaaggatgaaatacatatttaagcct 7820953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 14879315 - 14879386
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||| ||||| |  ||| |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  14879315 caaggattagcgaatatagagaccaatttttaaacgatccctaattgcaatgatgaaatatatatttaagcc 14879386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 31197140 - 31197065
Alignment:
Q  171 ttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||| |||||||  |||||||  |||||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  31197140 ttttccaggattaacgaatacagagacaaatttttaaatgacccctaattgcagggatgaaatacatatttaagcc 31197065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 41098802 - 41098731
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || ||||  ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  41098802 aggattagcgattacagagaccaatttttaaacgacccctaattgcaagaatgaaatacatatttaagccta 41098731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 1841810 - 1841888
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||  ||||||||||||| |||| ||| |||||||||||||||||||||| ||||    
T  1841810 gtttgcaaggattagcgaatacagggaacaatttttaaacgacccctcattacaaggatgaaatacatatttaaaccta 1841888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 4960611 - 4960541
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||||| |||||||  ||  ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  4960611 caaggattagcgaatacaaagagcaatttttaaacgacccctaattgcaatgatgaaatacatatttaagc 4960541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 25647941 - 25647883
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  25647941 tacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 25647883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 35152395 - 35152341
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  35152395 ggaccaatttttaaacgacctctaattgcaaggatgaaatacatatttaagccta 35152341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 46163099 - 46163033
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||| || ||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  46163099 aggattagcgattacatggaccaatttttaaacgacccctaattacaatgatgaaatacatatttaa 46163033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 40210446 - 40210373
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| |||||||  ||| || |||||||||| | |||||||||||||||||||||||||||||    
T  40210446 gtttgcaaggattagcgaatacaaagaccaaattttaaacgaccactaattgcaaggatgaaatacatatttaa 40210373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 46899952 - 46900029
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||| ||||| |||||||| ||| |||||||||| || || |||||||| |||||||||||||||||||||||    
T  46899952 gtttgcaagaattagcgaatacattgaccaatttttaaatgacccttaattgcatggatgaaatacatatttaagcct 46900029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 47999453 - 47999522
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||| || |||| |||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  47999453 gattagcgattacagggaccaatttttaaacgacccctaattacaaggatcaaatacatatttaagccta 47999522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 17662231 - 17662279
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  17662231 aatttttaaacgaccccaaattgcaaggatgaaatacatatttaagcct 17662279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 17692542 - 17692610
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||||| ||  ||| ||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  17692542 caaggattagcgataacagggaccgatttttaaacgacccctaattgcaaggatgaaatacatatttaa 17692610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 19017676 - 19017628
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19017676 aatttttaaacaacccctaattgcaaggatgaaatacatatttaagcct 19017628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 24009922 - 24009966
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  24009922 aatttttaaacgatccctaattgcaaggatgaaatacaaatttaa 24009966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 32917612 - 32917688
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||  |||||||  ||| ||||||||||||| || |||||||||| ||||||||||||||||||||    
T  32917612 gtttgcaaggattaacgaatacagagaccaatttttaaacgacccttaattgcaagaatgaaatacatatttaagcc 32917688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 37578573 - 37578621
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37578573 aatttttaaacgacccccaattgcaaggatgaaatacatatttaagcct 37578621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 41099085 - 41099157
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatattta 242  Q
    |||| |||||||||| |||||||  ||| ||||||||||||| | ||||||| ||||||||||||||||||||    
T  41099085 gtttgcaaggattagcgaatacagagaccaatttttaaacgaccactaattgtaaggatgaaatacatattta 41099157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 6518177 - 6518224
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  6518177 aatttttaaacgacccctaattgcaaggatgaaatatatatttaagcc 6518224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 30711374 - 30711327
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  30711374 aatttttaaacaacccctaattgcaaggatgaaatacatatttaagcc 30711327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 36694607 - 36694678
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || ||||  ||| ||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  36694607 aggattagcgattacagagaccaatttttaaacaacacctaattgcaaggatgaaatacatatttaagccta 36694678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 36710708 - 36710779
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || ||||  ||| ||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  36710708 aggattagcgattacagagaccaatttttaaacaacacctaattgcaaggatgaaatacatatttaagccta 36710779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 51015710 - 51015631
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||| ||||||||||||| | || |||| ||||||||||||| ||||| ||||| |||| || ||||||||||||||||    
T  51015710 tgtttgcaaggattagtgattgcaaggaccaatttttaaacgacccctatttgcagggatcaattacatatttaagccta 51015631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 26024492 - 26024422
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || ||||  ||| ||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  26024492 aggattagcgattacagagaccaatttttaaacgacccctaattgcaagaatcaaatacatatttaagcct 26024422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 7821306 - 7821382
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||||| || ||||||||||||| |  ||||||||| |||||||| |||||||||||||    
T  7821306 gtttgcaaggattagcgaatacatg-accaatttttaaacgacctttaattgcaatgatgaaatgcatatttaagcct 7821382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 42248520 - 42248475
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||    
T  42248520 aatttttaaacgaccactaattgcaaggatgaaatacatatttaag 42248475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 183550 - 183622
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccc-taattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| ||| ||||| ||||||| |||||||||||||||||||    
T  183550 aggattagcgattacagggaccaatttttaaacgaccccctaattacaaggatcaaatacatatttaagccta 183622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 17691290 - 17691218
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| || |||| |||| ||||||||||||| ||||| ||| ||||| |||||||||||| ||||||    
T  17691290 caaggattagcgattacagggaccaatttttaaacgacccctacttgtaaggacgaaatacatattaaagcct 17691218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 23209408 - 23209365
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  23209408 aatttttaaacga-ccctaattgcaaggatgaaatacatatttaa 23209365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 40439541 - 40439615
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccct-aattgcaaggatgaaatacatatttaag 244  Q
    |||| |||||||||| |||||||||  ||| ||||||||||| || | ||||||||||||||||||||||||||||    
T  40439541 gtttgcaaggattagcgaatacatgatcaa-tttttaaacgacccattaattgcaaggatgaaatacatatttaag 40439615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 14879038 - 14878980
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacat 237  Q
    |||||| || |||||| || ||||||||||||| |||||||||||||||| ||||||||    
T  14879038 gattagcgattacatgaaccaatttttaaacgacccctaattgcaaggataaaatacat 14878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 32917329 - 32917275
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaa 231  Q
    |||||||| || |||| |||| |||||||||||||| ||||||||||||||||||    
T  32917329 aggattagcgattacagggaccaatttttaaacgattcctaattgcaaggatgaa 32917275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 51019700 - 51019778
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||| ||| ||||||||| | || |||| ||||||||||||| ||||| ||||| |||| || |||||||||||||||    
T  51019700 tgtttgcaaagattagtgattgcaaggaccaatttttaaacgacccctatttgcagggatcaattacatatttaagcct 51019778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 40210751 - 40210796
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||    
T  40210751 aatttttaaacggcccctaattgcaatgatgaaatacatatttaag 40210796  T

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Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 7231630 - 7231678
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||||||  ||||||| ||||||| ||||||||||||||||||    
T  7231630 aatttttaaacgactcctaattacaaggataaaatacatatttaagcct 7231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 4960861 - 4960932
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatattt 241  Q
    |||| |||||||||| ||||||  |||| ||||||||||||| | |||||||| || |||||| ||||||||    
T  4960861 gtttgcaaggattagcgaatacggggaccaatttttaaacgacctctaattgctagtatgaaaaacatattt 4960932  T

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Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 40714800 - 40714871
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || ||||||||| |||||||||| ||  |||||||||||||| |||| ||||  |||||||||    
T  40714800 aggattagcgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 40714871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 1103505 - 1103463
Alignment:
Q  200 atttttaaacgatccctaattgcaaggatgaaatacatattta 242  Q
    |||||||||||| | |||||||||| |||||||||||||||||    
T  1103505 atttttaaacgacctctaattgcaaagatgaaatacatattta 1103463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 44522194 - 44522145
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| |||||||||||||| ||| |||| ||||| |||||||||    
T  44522194 aatttttaaatgatccctaattgcagggacgaaacacatacttaagccta 44522145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 49955416 - 49955347
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || |||| |||| |||||||||| ||| |||||||||||||| |||| ||||  |||||||    
T  49955416 aggattagcgattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 49955347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 52414856 - 52414820
Alignment:
Q  345 taaaagacacttaaaaaggaacggaggaattattatt 381  Q
    ||||||||||||||||||||||||||| | |||||||    
T  52414856 taaaagacacttaaaaaggaacggagggagtattatt 52414820  T

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Target: chr8 (Bit Score: 59; Significance: 8e-25; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 33357574 - 33357496
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33357574 gtttgcaaggattagcgaatacatggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 33357496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 1425129 - 1425051
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  1425129 gtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaaaccta 1425051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 13186129 - 13186059
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13186129 aggattagcgattacatgaaccaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 13186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 13186411 - 13186489
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||||| || ||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  13186411 gtttgcaaggattagcgaatacatgaaccaatttttaaacgacccctaattgcaaggatgaaatatatatttaagccta 13186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 40318040 - 40317966
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40318040 gtttgcaaggattagcgaatacagagacaaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 40317966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 8316729 - 8316652
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  8316729 gtttgcaaggattaacgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaagcct 8316652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 20386782 - 20386859
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  20386782 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 20386859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 20385644 - 20385568
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  20385644 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 20385568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 38956024 - 38956100
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  38956024 gtttacaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 38956100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 30459442 - 30459371
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||||||||||||| ||| |||||||||||||  |||||||| ||||||||||||||||||||||||    
T  30459442 caaggattagtgaatacatagactaatttttaaacgacgcctaattgtaaggatgaaatacatatttaagcc 30459371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 31608870 - 31608941
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||| |||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||||||    
T  31608870 caaggattagcgaatacatggaccaatttttaaacgacccttaattgcaaggatgaaatacttatttaagcc 31608941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 23663621 - 23663543
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||  ||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  23663621 gtttccaaggattaacgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaagccta 23663543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 40318323 - 40318393
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || ||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  40318323 aggattagcgattacatggactaatttttaaacaacccctaattgcaaggatgaaatacatatttaagcct 40318393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 38862915 - 38862988
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| |||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  38862915 gtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 38862988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 39071745 - 39071676
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39071745 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 39071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 22915719 - 22915787
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  22915719 gattagcgattacatggaccaatttttaaacgatccctagttgcaaggatcaaatacatatttaagcct 22915787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 34685610 - 34685685
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| | || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  34685610 gtttgcaaggattagcgaatacaag-accaatttttaaacgatccctaattgcaaggataaaatacatatttaagcc 34685685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 4994733 - 4994655
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||  ||  ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  4994733 gtttccaaggattagcgaatacagagatcaatttttaaacaatccctaattgcaacgatgaaatacatatttaagccta 4994655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 7295279 - 7295357
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| ||||  ||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  7295279 gtttgcaaggattagcgaatacagggaccgatttttaaacgatccataattgcaaggataaaatacatatttaaaccta 7295357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 8316947 - 8317017
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  8316947 aggattagcgattacaaggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 8317017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 12199026 - 12198948
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| || || | |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  12199026 gtttgcaaggattagcgattatagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 12198948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 12272994 - 12272920
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||||||||| || ||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  12272994 gtttgcaaggattagcgattacagagaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaag 12272920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 12443454 - 12443376
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| || || | |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  12443454 gtttgcaaggattagcgattatagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 12443376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 34177322 - 34177396
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||| ||| |||||||||||||||||||    
T  34177322 gtttacaaggattagcgaatacaaggaccaatttttaaacgacccctaattacaaagatgaaatacatatttaag 34177396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 16388630 - 16388581
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16388630 aatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 16388581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 34060560 - 34060487
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| || ||||||||| |||||||||||||    |||||||||||||||||||||||||||||||||    
T  34060560 caaggattagcgattacatggaccaatttttaaacgacgtttaattgcaaggatgaaatacatatttaagccta 34060487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 36928828 - 36928905
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||||||||||  ||||||| ||| ||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  36928828 gtttgcaaggattagcaaatacatagaccaatttttaaacgatatctaattgcaacgatgaaatacatatttaagcct 36928905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 31608597 - 31608526
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| |||||||||  ||| |||||||||||||||||||| |||||||||||||||| |||||||||    
T  31608597 caaggattagcgaatacatgatcaa-tttttaaacgatccctaattacaaggatgaaatacatgtttaagcct 31608526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 34061685 - 34061757
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| |||||||||||  |||||||||||||   ||||||||||||||| |||||||||||||||||    
T  34061685 caaggattagcgaatacatggatcaatttttaaacgacgtctaattgcaaggatgcaatacatatttaagcct 34061757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 4406029 - 4406088
Alignment:
Q  187 aatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||||| ||||||||||| | |||||||| |||||||||||||||||||||||||    
T  4406029 aatacatggaccaatttttaaacaacccctaattacaaggatgaaatacatatttaagcc 4406088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 7313356 - 7313435
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||| ||||||||||||| | || |||| ||||||||||||| ||||| ||||| |||| |||||||||||||||||||    
T  7313356 tgtttgcaaggattagtgattgcaaggaccaatttttaaacgacccctatttgcagggatcaaatacatatttaagccta 7313435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 23663873 - 23663944
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || ||||  ||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  23663873 aggattagcgattacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 23663944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 23698603 - 23698674
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  23698603 aggattagcgattacagggaccaatttttaaacgacccctaattacaaggatcaaatacatatttaagccta 23698674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 4995016 - 4995085
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| |||||||||| || |||||||||||||||||||||||||||||||||||    
T  4995016 aggattagcgattaca-ggaccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagcct 4995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 5960116 - 5960046
Alignment:
Q  176 aaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||| || |||| |||  ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  5960116 aaggattagcgattacagggagcaatttttaatcgatccctaattgcaaggatgaaatacatgtttaagcc 5960046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 39072009 - 39072071
Alignment:
Q  186 gaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||| |||| ||||||||||||| || | |||||||||||||||||||||||||||||||    
T  39072009 gaatacagggaccaatttttaaacgacccttgattgcaaggatgaaatacatatttaagccta 39072071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 16388897 - 16388954
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||| || |||||||||| || ||||||||||||||||||||||||||||||||||    
T  16388897 tacatgaaccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagcc 16388954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 38955772 - 38955703
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || ||||  ||| ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  38955772 aggattagcgattacaatgaccaatttttaaacgatccccaattgcaaggatcaaatacatatttaagcc 38955703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 12273224 - 12273283
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  12273224 tacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaaaccta 12273283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 7306476 - 7306398
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||| |||| |||||||| | || |||| ||||||||||||| ||||| ||||| |||| ||||||||||||||||||    
T  7306476 tgtttgcaagaattagtgattgcaaggaccaatttttaaacgacccctatttgcagggatcaaatacatatttaagcct 7306398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 10749879 - 10749937
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||| |||||||||| |||||||||||||||||| |||| ||||||| ||||||    
T  10749879 tacatggaccaatttttaaatgatccctaattgcaaggacgaaacacatattaaagcct 10749937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 36186448 - 36186494
Alignment:
Q  202 ttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| || |||||||||||||||||||||||||||||||||    
T  36186448 ttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 36186494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 23698385 - 23698308
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccc-taattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||| ||||| || |||| |||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  23698385 gtttgcaagaattagcgattacagggactaatttttaaacgaccccctaattgcaaggatcaaatacatatttaagcc 23698308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 2534771 - 2534695
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| || |||||| || ||||||||||||| || |||||||| ||  ||||||||||||||||||    
T  2534771 gtttgcaaggattagcgattacatgtaccaatttttaaacgacccataattgcagggtcgaaatacatatttaagcc 2534695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 36186177 - 36186105
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatattta 242  Q
    |||| |||||||||| ||||||| |||| || ||||||| || |||||||| ||| |||||||||||||||||    
T  36186177 gtttgcaaggattagcgaatacagggaccaaattttaaaagacccctaattacaaagatgaaatacatattta 36186105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 42803594 - 42803646
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||||||   ||||||||||||||||||||||||||||||||    
T  42803594 ggaccaatttttaaacgacttctaattgcaaggatgaaatacatatttaagcc 42803646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 30712069 - 30712143
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| ||||||||||  |||||| |||| ||||||||||||  ||||||| |||||||| ||||||||||||||||    
T  30712069 gtttgcaaggattagcaaataca-ggaccaatttttaaacggcccctaatcgcaaggatcaaatacatatttaagc 30712143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 30719846 - 30719920
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| ||||||||||  |||||| |||| ||||||||||||  ||||||| |||||||| ||||||||||||||||    
T  30719846 gtttgcaaggattagcaaataca-ggaccaatttttaaacggcccctaatcgcaaggatcaaatacatatttaagc 30719920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 9065717 - 9065667
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| ||||||||||||| |||||||| ||| |||||||||||||||||||    
T  9065717 ggaccaatttttaaacgacccctaattacaaagatgaaatacatatttaag 9065667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 22915465 - 22915399
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaataca 236  Q
    |||| |||||||||| || ||||||||| |||||||||| |||| ||||||||||| || |||||||    
T  22915465 gtttgcaaggattagcgattacatggaccaatttttaaatgatctctaattgcaagaatcaaataca 22915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 38862684 - 38862618
Alignment:
Q  180 attagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||| || |||||| | ||| |||||||||  || |||||||||||||||||||||||||||||||    
T  38862684 attagcgattacatgaaaaaaattttaaacggcccttaattgcaaggatgaaatacatatttaagcc 38862618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 12199263 - 12199332
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||||||||| || |||| |||| |||||||||||||  |||||||  |||||| |||||||||||||||    
T  12199263 caaggattagcgattacaaggaccaatttttaaacgactcctaattataaggatcaaatacatatttaag 12199332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 12443691 - 12443760
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||||||||| || |||| |||| |||||||||||||  |||||||  |||||| |||||||||||||||    
T  12443691 caaggattagcgattacaaggaccaatttttaaacgactcctaattataaggatcaaatacatatttaag 12443760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 34176491 - 34176443
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  34176491 aatttttaaacga-ccataattgcaaggatgaaatacatatttaaaccta 34176443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 1425381 - 1425448
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||||||||| |||| |||| ||||||||||||| | |||||| ||||||| ||||| ||||||||||    
T  1425381 aggattagtgattaca-ggaccaatttttaaacgacctctaattacaaggatcaaatatatatttaagc 1425448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 9065751 - 9065799
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||  | ||||||||||||||||| |||||||||||||||||    
T  9065751 aatttttaaataacccctaattgcaaggatggaatacatatttaagcct 9065799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 7294177 - 7294103
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| |||||||||| ||||| |  ||  ||||||||||||| | ||||||||||| |||||||||||||||||||    
T  7294177 gtttacaaggattagcgaatatagagatcaatttttaaacgacctctaattgcaag-atgaaatacatatttaagc 7294103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 7983497 - 7983426
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| |||||||||| ||  |||||||||||||| |||| ||||| |||||||||    
T  7983497 aggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacataattaagccta 7983426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 4405738 - 4405700
Alignment:
Q  207 aacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  4405738 aacgacccctaattgcaagaatgaaatacatatttaagc 4405700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 2535921 - 2535978
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||| |||||||||| || ||||||||||| ||| |||||||||||| |||||    
T  2535921 tacagggaccaatttttaaatgacccctaattgcagggacgaaatacatattaaagcc 2535978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 11761887 - 11761838
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||  ||||||||||||| |||||||| ||||||| |||||||    
T  11761887 aatttttaaataatccctaattgcagggatgaaaaacatattaaagccta 11761838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 35756630 - 35756582
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| || ||||||||||| | ||||||||||||||||||||||    
T  35756630 aatttttaaatgacccctaattgcatg-atgaaatacatatttaagccta 35756582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 43181533 - 43181574
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatt 240  Q
    |||||||||||||||||||||| ||| || ||||||||||||    
T  43181533 aatttttaaacgatccctaattacaaagacgaaatacatatt 43181574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 25124632 - 25124572
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacat 237  Q
    |||||||| || ||||||||| |||||||||| ||  |||||||||||| | |||||||||    
T  25124632 aggattagcgattacatggactaatttttaaatgacgcctaattgcaagaacgaaatacat 25124572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 12080988 - 12081066
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  12080988 gtttgcaaggattagcgaatacagggacaaatttttaaacgactcctaattgcaaggatgaaatacatatttaagccta 12081066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 30726111 - 30726189
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30726111 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 30726189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 33647303 - 33647381
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33647303 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 33647381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 3059608 - 3059685
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3059608 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 3059685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 8090284 - 8090357
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  8090284 caaggattagtgaatacaaggaccaatttttaaacgacccctaattgcaaggatgtaatacatatttaagccta 8090357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 33517891 - 33517963
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33517891 caaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 33517963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 21627789 - 21627712
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| |||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  21627789 gtttgcaaggattagcgaatacatggatcaatttttaaacgatccttaattacaaggatgaaatacatatttaagcct 21627712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 681080 - 681158
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||  ||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  681080 gtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 681158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 11434878 - 11434804
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| ||| |||||| |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  11434878 gtttgcaacgattagcgaatacatggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaag 11434804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 20651086 - 20651008
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| | || ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  20651086 gtttgcaaggattagcgaatacaggaaccaatttttaaacgatccctaattgcagggatcaaatacatatttaagccta 20651008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 12407579 - 12407508
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||| |||||||  ||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  12407579 caaggattagcgaatacagagaccaatttttaaacgatccttaattgtaaggatgaaatacatatttaagcc 12407508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 30337518 - 30337447
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  30337518 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 30337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 13379834 - 13379912
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||| ||||| ||||||| |||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  13379834 gtttgcaagaattagcgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaagccta 13379912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 21628072 - 21628142
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  21628072 aggattagcgattacagggaccaatttttaagcgacccctaattgcaaggatgaaatacatatttaagcct 21628142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 30804213 - 30804291
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||| ||||| ||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  30804213 gtttgcaagaattagcgaatacagggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaatccta 30804291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 33517603 - 33517537
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||| || |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  33517603 aggattagcgattacagggaccaatttttaaacgatccctaattacaaggatgaaatacatatttaa 33517537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 679942 - 679865
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| |||||||  ||| ||||||||||||| || ||||||||||||| ||||||||||||||||||    
T  679942 gtttgcaaggattagcgaatacagagaccaatttttaaacgacccttaattgcaaggatcaaatacatatttaagcct 679865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 12408528 - 12408601
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| ||||||| |||| || |||||||| | ||||||||| ||||||||||||||||||||||||||    
T  12408528 caaggattagcgaatacaaggaccaacttttaaacaacccctaattgtaaggatgaaatacatatttaagccta 12408601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 15115391 - 15115339
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15115391 ggaccaatttttaaacgatctctaattgcaaggatgaaatacatatttaagcc 15115339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 30337770 - 30337846
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| || |||| |||| |||||||||| || |||||||||||||||| |||||||||||||||||    
T  30337770 gtttgcaaggattagcgattacagggaccaatttttaaatgacccctaattgcaaggatcaaatacatatttaagcc 30337846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 3059326 - 3059255
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||||||||||  |||||||||| || |||||||||||||||||||||||||||| ||||    
T  3059326 aggattagcgattacatggacaatattttaaacgacccttaattgcaaggatgaaatacatatttaaaccta 3059255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 26463248 - 26463177
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||  ||||||| |||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  26463248 aggattaacgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaagccta 26463177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 11393156 - 11393233
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||  |||| ||||||||||||| |||||||| ||| ||||||||||||| ||||||||    
T  11393156 gtttgcaaggattagcgaatacggggaccaatttttaaacgacccctaattacaaagatgaaatacatacttaagcct 11393233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 17734272 - 17734195
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||||||||||  | |||| | || ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  17734272 gtttgcaaggattagcaattacaagaaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 17734195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 20651999 - 20652076
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||||||||||| |||  ||||||||||||| || |||||||| | || ||||||||||||||||||    
T  20651999 gtttgcaaggattagtgaatacagggatcaatttttaaacgacccataattgcaggaattaaatacatatttaagcct 20652076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 15116584 - 15116660
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| || |||  |||| ||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  15116584 gtttgcaaggattagcgattacgaggaccaatttttaaacgacccctaattgcaaggacgaaatacatattaaagcc 15116660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 12080683 - 12080638
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  12080683 aatttttaaacgacccctaattgcaaggatgaaatacaaatttaag 12080638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 30725828 - 30725760
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || ||||  ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  30725828 aggattagcgattacagagaccaatttttaaacga-ccctaattgcaagaatgaaatacatatttaagcc 30725760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 17734522 - 17734590
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||| || ||||||||  ||||||||||||| || |||||| |||||| ||||||||||||||||    
T  17734522 aggattagcgattacatggatcaatttttaaacgacccataattgtaaggatcaaatacatatttaagc 17734590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 22617930 - 22617886
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  22617930 aatttttaaacgactcctaattgcaaggatgaaatacatatttaa 22617886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 26464568 - 26464627
Alignment:
Q  187 aatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||| |||| | |||||||| || ||||||||||| ||||||||||||||||||||||    
T  26464568 aatacagggaccattttttaaatgacccctaattgcagggatgaaatacatatttaagcc 26464627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 8089495 - 8089442
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||||||||||||| ||||||||||| ||| | |||||||||||||||||    
T  8089495 ggaccaatttttaaacgacccctaattgcagggaggtaatacatatttaagcct 8089442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 8418417 - 8418461
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||    
T  8418417 aatttttaaacgattcctaattgcaaggatg-aatacatatttaag 8418461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 29810797 - 29810866
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||| |||| |||| |||||||||| || ||||||||||| ||| |||| ||||||| |||||||    
T  29810797 gattagtgattacaaggaccaatttttaaatgagccctaattgcagggacgaaacacatattaaagccta 29810866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 30803908 - 30803859
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| ||||    
T  30803908 aatttttaaacgacacctagttgcaaggatgaaatacatatttaacccta 30803859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 28498384 - 28498455
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| |||||||||| || ||||||||||| ||| |||| ||||||| |||||||    
T  28498384 aggattagcgattacaaggaccaatttttaaatgagccctaattgcagggacgaaacacatattaaagccta 28498455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 15913920 - 15913976
Alignment:
Q  192 atggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||||||| || || |||||||||||| |||| ||||  |||||||||    
T  15913920 atggacaaatttttaaatgacccttaattgcaaggacgaaacacatcattaagccta 15913976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 8e-25; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 14194499 - 14194421
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14194499 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 14194421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 6150523 - 6150453
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||| |||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6150523 aggattagtgattacatgaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 6150453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 6150788 - 6150850
Alignment:
Q  186 gaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6150788 gaatacatggactaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 6150850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 19892384 - 19892310
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  19892384 gtttgcaaggattaacgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 19892310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 28770945 - 28770867
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  28770945 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 28770867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 11762069 - 11762146
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  11762069 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 11762146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 16083295 - 16083372
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||| ||| || |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16083295 gtttgcaaggattagcgaatatatgaaccaatttttaaacgatccttaattgcaaggatgaaatacatatttaagcct 16083372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 42265811 - 42265734
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  42265811 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcagggatgaaatacatatttaagcct 42265734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 5024095 - 5024019
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||||| |  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5024095 gtttgcaaggattagcgaatacatgtatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 5024019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 17202751 - 17202827
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  17202751 gtttgcaaggattagcgaatacagggaccgatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 17202827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 27587467 - 27587543
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  27587467 gtttgcaaggattagcgaatacaaggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 27587543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 19517959 - 19518034
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| ||| |||||| |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  19517959 gtttgcaaagattagcgaatacatggactaatttttaaactacccctaattgcaaggatgaaatacatatttaagc 19518034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 28269498 - 28269420
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||  |||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  28269498 gtttgcaaggattagcgaatactgggaccaatttttaaacgacccctaattgcaatgatgaaatacatatttaagccta 28269420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 29646438 - 29646360
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||||||| |||||||||| || |||||||| ||||||| |||||||||||||||||||    
T  29646438 gtttgcaaggattagcgaatacatggaccaatttttaaaagacccctaattacaaggataaaatacatatttaagccta 29646360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 35512466 - 35512540
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||||||| | ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35512466 gtttgcaaggattggcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 35512540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 3528949 - 3528872
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||||||||||  |||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  3528949 gtttgcaaggattagcaaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 3528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 11047789 - 11047861
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||    
T  11047789 gtttgcaaggattagtgaatacatg-accaatttttaaacgacccctacttgcaaggatgaaatacatatttaa 11047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 11740763 - 11740690
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| ||||| |||||  ||||||||||||| |||||||||||||||||||||||||||||||    
T  11740763 gtttgcaaggattagcgaatatatggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 11740690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 18247152 - 18247087
Alignment:
Q  180 attagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  18247152 attagcgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagc 18247087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 18247428 - 18247505
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| |||||||  ||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  18247428 gtttgcaaggattagcgaatacagagaccaaattttaaacgacccctaattgcaaggatgaaatacatatttaagcct 18247505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 32242594 - 32242670
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  32242594 gtttgcaaggattagcgaataca-ggactaatttttaaacaacccctaattgcaaggatgaaatacatatttaagcct 32242670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 39453651 - 39453728
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||| |||||| ||||||| |||| |||||||||| || |||||||||||||||||||||||||||||||||||    
T  39453651 gtttgcaaagattagcgaatacagggaccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagcct 39453728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 5993955 - 5993887
Alignment:
Q  180 attagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||| || |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5993955 attagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 5993887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 16156931 - 16156856
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| |||||||||  |||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  16156931 gtttgcaaggattaacgaatacatagaccaatttttaaacgacccctaattgcaagtatgaaatacatatttaagc 16156856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 20814494 - 20814565
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || ||||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20814494 aggattagcgattacagtgaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 20814565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 38475370 - 38475429
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  38475370 tacatggaccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaagccta 38475429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 43159172 - 43159239
Alignment:
Q  176 aaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    ||||||||| |||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  43159172 aaggattagcgaatacaacgaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 43159239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 11761818 - 11761748
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  11761818 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 11761748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 16157231 - 16157284
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16157231 ggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 16157284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 20840580 - 20840531
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20840580 aatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 20840531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 27587217 - 27587148
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  27587217 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 27587148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 186771 - 186847
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| ||| ||||||  |||||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  186771 gtttgcaaagattagcaaatacagggaccaatttttaaacgacctctaattgcaaggatgaaatacatatttaagcc 186847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 18670269 - 18670201
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||| || |||| |||| ||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  18670269 gattagcgattacagggaccaatttttaaacgacccctacttgcaaggatgaaatacatatttaagcct 18670201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 8322756 - 8322827
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatattt 241  Q
    |||| |||||||||  ||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||    
T  8322756 gtttgcaaggattaacgaatacggggaccaatttttaaacgacccctaattgcaaggatgaaatacatattt 8322827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 28771199 - 28771266
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||| || ||||||||| ||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  28771199 gattagcgattacatggaccaatttttaaacgacccctaattacaaggatcaaatacatatttaagcc 28771266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 35512217 - 35512146
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  35512217 aggattagcgattacagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaaaccta 35512146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 38442419 - 38442494
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| |||||||||  ||||||| | ||  |||||||||||| |||||||||||||||||||||||||||||||||    
T  38442419 gtttgcaaggattaacgaatacaagaacccatttttaaacgacccctaattgcaaggatgaaatacatatttaagc 38442494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 39453369 - 39453302
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||||||| || ||||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  39453369 aggattagcgattacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 39453302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 5024377 - 5024443
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||| || ||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  5024377 aggattagcgattacaatgaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 5024443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 6301895 - 6301970
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||  ||||||| |||| ||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  6301895 gtttgcaaggattaacgaatacaaggaccaatttttaaacgacccctaattgcaa--atgaaatacatatttaagcct 6301970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 13963181 - 13963259
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||  |||||||| ||| ||||||||||||| || ||||| ||||||||||||| |||||||||||||    
T  13963181 gtttgcaaggattaacgaatacatagaccaatttttaaacgacccataattacaaggatgaaatatatatttaagccta 13963259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 20814211 - 20814134
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| | || ||||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  20814211 gtttgcaaggattagcgaatacaag-accaatttttaaacgacctctaattgtaaggatgaaatacatatttaagccta 20814134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 24547253 - 24547175
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| || |||| |||| ||||||| ||||| |||||||||||||||| || ||||||||||||||||    
T  24547253 gtttgcaaggattagcgattacagggaccaattttttaacgacccctaattgcaaggatcaagtacatatttaagccta 24547175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 24547484 - 24547554
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || || | |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  24547484 aggattagcgattataaggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 24547554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 35920299 - 35920229
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||  || ||| ||||||||||||||||    
T  35920299 caaggattagcgaatacattgaccaatttttaaacgatccctaattaaaatgatcaaatacatatttaagc 35920229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 37991275 - 37991197
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||  ||||||| |||| ||||||||||||| ||||||||||| ||||||| | ||||||||||||||    
T  37991275 gtttgcaaggattaacgaatacagggaccaatttttaaacgacccctaattgcagggatgaatttcatatttaagccta 37991197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 3529213 - 3529270
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  3529213 tacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 3529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 20840818 - 20840867
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  20840818 aatttttaaacgacccctaattgtaaggatgaaatacatatttaagccta 20840867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 21257513 - 21257586
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| |||||||  | | ||||||||||||| ||||||||||| |||||||||||||||||||    
T  21257513 gtttgcaaggattagcgaatacagtgtccaatttttaaacgacccctaattgcagggatgaaatacatatttaa 21257586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 32242289 - 32242240
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  32242289 aatttttaaacgacccctaattgcaaggatgaaatacatatttaacccta 32242240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 35920543 - 35920612
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||| | |||||||||||||||||||||    
T  35920543 aggattagcgattacagggaccaatttttaaacgacccctaattgctatgatgaaatacatatttaagcc 35920612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 13362589 - 13362653
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||| || |||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  13362589 gattagcgattacaaggaccaatttttaaacgacccctaattgcaatgatgaaatacatatttaa 13362653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 38475109 - 38475033
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| |||||||||||| |||||||||| || |  ||||||| | |||||||||||||||||||||    
T  38475109 gtttgcaaggattagcgaatacatggaccaatttttaaatgacctttaattgctatgatgaaatacatatttaagcc 38475033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 5994241 - 5994304
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaat 233  Q
    |||| |||||||||| ||||||||| || ||||||||||||| || ||||||||||||||||||    
T  5994241 gtttgcaaggattagcgaatacatgaaccaatttttaaacgacccttaattgcaaggatgaaat 5994304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 13962921 - 13962862
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  13962921 tacagggaccaatttttaaacgacccctaattgcaaggataaaatatatatttaagccta 13962862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 6301619 - 6301545
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| || |||||||||  |||||||||||||||||||||    
T  6301619 gtttgcaaggattagcgaatacaaggaccaatttttaaacga-ccataattgcaa--atgaaatacatatttaagcct 6301545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 17202468 - 17202398
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || ||||  ||| ||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  17202468 aggattagcgattacagtgaccaatttttaaacgacccctaattggaaggatgaaatatatatttaagcct 17202398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 19892689 - 19892734
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||    
T  19892689 aatttttaaacgacctctaattgcaaggatgaaatacatatttaag 19892734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 5835783 - 5835851
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||||| |||||||   || ||||||||||| |  ||||||||||||||||||||||||||||||    
T  5835783 caaggattagcgaatacagaaaccaatttttaaacaactcctaattgcaaggatgaaatacatatttaa 5835851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 21265523 - 21265571
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||    
T  21265523 aatttttaaacgacccttaattgtaaggatgaaatacatatttaagcct 21265571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 27937380 - 27937424
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    ||||||||||||| || ||||||||||||||||||||||||||||    
T  27937380 aatttttaaacgacccataattgcaaggatgaaatacatatttaa 27937424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 28269762 - 28269809
Alignment:
Q  200 atttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  28269762 atttttaaacgacccctaattgcaag-atgaaatacatatttaagccta 28269809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 37992670 - 37992714
Alignment:
Q  200 atttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||    
T  37992670 atttttaaacgacccctaattgcatggatgaaatacatatttaag 37992714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 11741869 - 11741944
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| ||| |||||| |||||||  |||  ||||||||| || |||||||| ||||||||||||||||||||||||    
T  11741869 gtttgcaaagattagcgaatacagagaccgatttttaaatgacccctaattacaaggatgaaatacatatttaagc 11741944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 14194782 - 14194852
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||| | ||||||| ||| ||||||||||| |||||||| ||||||||||| |||| ||||||||||    
T  14194782 aggattagtaattacatggccaa-tttttaaacgacccctaattacaaggatgaaagacatttttaagccta 14194852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 16083034 - 16082979
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||| ||||||||||| | ||||||||| ||||||||||||||||||||||    
T  16083034 tacagggactaatttttaaacaacccctaattggaaggatgaaatacatatttaag 16082979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 27937088 - 27937053
Alignment:
Q  213 ccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||||||||||||||||||||||||||    
T  27937088 ccctaattgcaaggatgaaatacatatttaagccta 27937053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 5256369 - 5256433
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatt 240  Q
    ||||||||||| | ||||| ||| ||||||||||||| ||||||||||||||| || |||||||||    
T  5256369 caaggattagtcattacattgaccaatttttaaacga-ccctaattgcaaggacgagatacatatt 5256433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 5835683 - 5835622
Alignment:
Q  186 gaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||| | || ||||||||||||||||||||||  ||  |||||||||||||||||||||    
T  5835683 gaatacaagaaccaatttttaaacgatccctaattaaaaaaatgaaatacatatttaagcct 5835622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 18670507 - 18670575
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||| | |||||||  ||| |||||||||||||| | ||||| |||||| |||||||||||||||    
T  18670507 caaggattggcgaatacagagaccaatttttaaacgattcataattacaaggaagaaatacatatttaa 18670575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 13362283 - 13362248
Alignment:
Q  213 ccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13362283 ccctaattgcaaggatgaaatacatatttaaaccta 13362248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 247
Target Start/End: Original strand, 42265890 - 42265921
Alignment:
Q  216 taattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||||||||||||||||||||||    
T  42265890 taattgcaaggatgaaatacatatttaagcct 42265921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 10684290 - 10684362
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||||||||||  | |  ||||||||||||| |  ||||||||| ||||||||||||||||||    
T  10684290 gtttgcaaggattagtgaatacg-gaatcaatttttaaacgacctttaattgcaaagatgaaatacatatttaa 10684362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 11047470 - 11047437
Alignment:
Q  214 cctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||| ||||||||||||||||||||    
T  11047470 cctaattgcaagggtgaaatacatatttaagcct 11047437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 35855624 - 35855661
Alignment:
Q  211 atccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  35855624 atccctaattgaaaggatgaaatacatagttaagccta 35855661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 186466 - 186419
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||| |||||||| ||| ||||||||| ||||||||||||    
T  186466 aatttttaaacgacccctaatttcaa-gatgaaataaatatttaagcct 186419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 21265219 - 21265167
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgc 222  Q
    |||| ||||||||||  ||||||||||| ||||||||||||| | ||||||||    
T  21265219 gtttgcaaggattagcaaatacatggaccaatttttaaacgacctctaattgc 21265167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 24204978 - 24205018
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatat 239  Q
    ||||||||||||| |||||||||||| ||| ||||||||||    
T  24204978 aatttttaaacgacccctaattgcaaagataaaatacatat 24205018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 40150167 - 40150243
Alignment:
Q  171 ttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||| |||||||  || |||| |||| |||||| ||| || ||||||||||||||| |||| ||||||| ||||||    
T  40150167 ttttctaggattaacgattacagggaccaattttaaaatgacccctaattgcaaggacgaaacacatattaaagcct 40150243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 8e-25; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 10781836 - 10781914
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  10781836 gtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 10781914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 51692871 - 51692949
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51692871 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 51692949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 24349750 - 24349672
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  24349750 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 24349672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 46661273 - 46661343
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||| |||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46661273 aggattagtaaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 46661343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 52909605 - 52909683
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  52909605 gtttgcaaggattagcgaatacatagaccaatttttaaatgatccataattgcaaggatgaaatacatatttaagccta 52909683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 1179152 - 1179229
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| |||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  1179152 gtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaagataaaatacatatttaagcct 1179229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 10780789 - 10780712
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| |||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  10780789 gtttgcaaggattagcgaatgcatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 10780712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 10974398 - 10974321
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| |||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  10974398 gtttgcaaggattagcgaatgcatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 10974321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 11108192 - 11108265
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| ||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  11108192 gtttgcaaggattagcgaatacaaggatcaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 11108265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 18831669 - 18831745
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| ||| |||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18831669 gtttgcaatgattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 18831745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 5369016 - 5368946
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5369016 aggattagcgattacaaggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagcct 5368946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 24411700 - 24411778
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| |||  ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  24411700 gtttgcaaggattagcgaatacagggatcaatttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 24411778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 35028074 - 35027996
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| | || ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  35028074 gtttgcaaggattagcgaatacaggaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaaccta 35027996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 36008920 - 36008842
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| ||| |||||| ||||||| |||| |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  36008920 gtttgcaatgattagcgaatacagggaccaatttttaaacgatccctaattacaaggatcaaatacatatttaagccta 36008842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 13058334 - 13058411
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  13058334 gtttgcaaggattagcgaatacagggaccaatttttaaacgaccccttattgcaaggatcaaatacatatttaagcct 13058411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 24350784 - 24350861
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||| |||| || |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  24350784 gtttgcaaggattagcgaatgcagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 24350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 147395 - 147319
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  147395 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgtagggatgaaatacatatttaagcc 147319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 7452155 - 7452231
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| |||||||  ||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  7452155 gtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 7452231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 23613376 - 23613308
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||| || ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  23613376 gattagcgattacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 23613308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 15507749 - 15507674
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| |||||||||| ||||| | |||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  15507749 gtttgcaaggattagcgaatatagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagc 15507674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 23613635 - 23613706
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||||| ||||||| |||  ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  23613635 caaggattagcgaatacagggatcaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 23613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 34765739 - 34765810
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  34765739 aggattagcgattacatgaaccaatttttaaacgacccctaattgcaaggataaaatacatatttaagccta 34765810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 54086765 - 54086698
Alignment:
Q  176 aaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    ||||||||| |||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  54086765 aaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 54086698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 148107 - 148185
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||  ||||| | |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  148107 gtttgcaaggattaacgaataaagggaccaatttttaaacgacccctaattgcagggatgaaatacatatttaagccta 148185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 14802097 - 14802163
Alignment:
Q  180 attagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||| |||||||||||    
T  14802097 attagcgaatacaaggaccaatttttaaacgatctctaattgcaaggatgaaatatatatttaagcc 14802163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 24711180 - 24711110
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  24711180 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 24711110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 24711452 - 24711510
Alignment:
Q  190 acatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  24711452 acatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 24711510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 34765456 - 34765378
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||||| ||||  |||||||||||| || ||||||||||||| |||||||||||||||||||    
T  34765456 gtttgcaaggattagcgaatacaaggaccgatttttaaacgacccttaattgcaaggataaaatacatatttaagccta 34765378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 50418744 - 50418666
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||  || |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  50418744 gtttgcaaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 50418666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 55867466 - 55867544
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||  || ||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  55867466 gtttgcaaggattaacgattacatggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaagccta 55867544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 37248557 - 37248630
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| || |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  37248557 gtttgcaaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 37248630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 43155605 - 43155532
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| || ||||||||||||| ||||||||||||||    
T  43155605 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatcaaatacatatttaa 43155532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 1178127 - 1178056
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| ||||||||| || ||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  1178127 caaggattagcgaatacatg-accaatttttaaacgacctctaattacaaggatgaaatacatatttaagcct 1178056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 35028355 - 35028427
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| ||| | |||||| ||||||||||  | |||||||||||||||||||||||||||||||||||    
T  35028355 caaggattagcgaacatatggaccaatttttaaaatacccctaattgcaaggatgaaatacatatttaagcct 35028427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 44967139 - 44967071
Alignment:
Q  176 aaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    ||||||||| |||||||  ||| ||||||||||||| |||||||||||||||| |||||||||||||||    
T  44967139 aaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaag 44967071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 7451891 - 7451832
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  7451891 tacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 7451832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 13058106 - 13058035
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || ||||  ||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  13058106 aggattagcgattacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 13058035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 15508032 - 15508098
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||||||| || |||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  15508032 aggattagcgattacaaggacaa-tttttaaacgacccctaattgcaaggatgaaatacatatttaag 15508098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 39539289 - 39539348
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||| ||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  39539289 tacattgaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 39539348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 44967397 - 44967468
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  44967397 aggattagcgattacagggaccaatttttaaacgacctctaattgcaaggatcaaatacatatttaagccta 44967468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 49879283 - 49879208
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| ||||||||||  | |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  49879283 gtttgcaaggattagcaattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagc 49879208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 50418996 - 50419067
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || || | |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  50418996 aggattagcgattagagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 50419067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 51692622 - 51692551
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || ||||| ||  ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  51692622 aggattagcgattacatagatcaatttttaaacgacctctaattgcaaggatgaaatacatatttaagccta 51692551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 53129576 - 53129505
Alignment:
Q  176 aaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||  ||||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  53129576 aaggattagcaaatacatgaccaattttttaaacgatccctaattgcaatgataaaatacatatttaagcct 53129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 14801805 - 14801735
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || ||||  ||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  14801805 aggattagcgattacaaagaccaatttttaaacgactcctaattgcaaggatgaaatacatatttaagcct 14801735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 18831418 - 18831348
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| ||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  18831418 aggattagcgattacagggaccaatttttaaacgacccctaattgtaaggatcaaatacatatttaagcct 18831348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 17356001 - 17355924
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||| |||||| |||||||   || |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  17356001 gtttgcaaagattagcgaatacagcaaccaatttttaaacgactcctaattgcaaggatgaaatacatatttaagcct 17355924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 17356283 - 17356348
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||||| ||||||| |||| ||||||||||||| || |||||| ||||||||||||||||||||||    
T  17356283 gattagcgaatacagggaccaatttttaaacgacccgtaattggaaggatgaaatacatatttaag 17356348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 48528545 - 48528484
Alignment:
Q  186 gaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||  ||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  48528545 gaatacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 48528484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 16006151 - 16006219
Alignment:
Q  176 aaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    ||||||||| |||||||  ||| ||||||||||||| ||||||||||||| || |||||||||||||||    
T  16006151 aaggattagcgaatacagagaccaatttttaaacgacccctaattgcaagaatcaaatacatatttaag 16006219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 53129887 - 53129935
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  53129887 aatttttaaacgacccctgattgcaaggatgaaatacatatttaagcct 53129935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 55866180 - 55866111
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||||||||||||   || ||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  55866180 caaggattagtgaatacaa--accaatttttaaacgacccctaattgcagggacgaaatacatatttaagcc 55866111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 37248305 - 37248238
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||| | |||||||||||||||    
T  37248305 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggttcaaatacatatttaag 37248238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 35508621 - 35508670
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  35508621 aatttttaaacgacccctaattgcaatgataaaatacatatttaagccta 35508670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 37976229 - 37976156
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| ||| |||||| ||||||| | || | ||||||||||| | |||||||||||||||||||||||||||||    
T  37976229 gtttgcaaagattagcgaatacaggaaccagtttttaaacgacctctaattgcaaggatgaaatacatatttaa 37976156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 37976534 - 37976583
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  37976534 aatttttaaacgacccctaattgccatgatgaaatacatatttaagccta 37976583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 53701859 - 53701814
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||    
T  53701859 aatttttaaacgacccctaattgcaaggatgaaatagatatttaag 53701814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 52909322 - 52909254
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||| || ||||  ||| ||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  52909322 aggattagcgattacagtgaccaatttttgaacgacccctaattgcaaagatgaaatacatatttaagc 52909254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 24411415 - 24411360
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||| ||||||||||| | |||||||||| |||||||||||||||||||||    
T  24411415 tacagggaccaatttttaaactacccctaattgctaggatgaaatacatatttaag 24411360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 43155867 - 43155926
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||| ||||||||||||| ||||||||  |||||| |||||||||||||||||||    
T  43155867 tacagggaccaatttttaaacgacccctaattataaggatcaaatacatatttaagccta 43155926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 54087066 - 54087121
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||| ||||||||||||| |||||||| ||| |||||||||||||||||||    
T  54087066 tacagggaccaatttttaaacgacccctaattacaatgatgaaatacatatttaag 54087121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 54435468 - 54435527
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||  |||||||||||||  |||||||||||| | ||||||||||||||||||||    
T  54435468 tacatggatcaatttttaaacgacacctaattgcaagcacgaaatacatatttaagccta 54435527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 40387536 - 40387466
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| ||||||| |||| |||||||||| |  ||||||||||| |||||||| ||||||| ||||||    
T  40387536 aggattagcgaatacagggaccaatttttaaatggcccctaattgcagggatgaaacacatattaaagcct 40387466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 52573585 - 52573655
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||| ||||||||| |||||||||| ||  |||||||||||||| |||| ||||  ||||||||    
T  52573585 aggattagtgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 52573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 36009167 - 36009244
Alignment:
Q  172 tttcaaggattagtgaatacatggacaaatttttaaacgatccc-taattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||  || |||| |||| ||||||||||||| ||| ||||| ||||||| |||||||||||||||||||    
T  36009167 tttccaggattaacgattacagggaccaatttttaaacgaccccctaattacaaggatcaaatacatatttaagccta 36009244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 53702167 - 53702227
Alignment:
Q  186 gaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||| || ||||||||||| | | |||||||||| ||||||||||||||||||||||    
T  53702167 gaatacatg-accaatttttaaacaacctctaattgcaaagatgaaatacatatttaagcct 53702227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 54713648 - 54713615
Alignment:
Q  214 cctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||||||||||||||||||||||||    
T  54713648 cctaattgcaaggatgaaatacatatttaagcct 54713615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 5369219 - 5369295
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||  |||| || |||| ||||||||||||| ||||| ||  |||||| |||||||||||||||||    
T  5369219 gtttgcaaggattaacgaatgcagggaccaatttttaaacgacccctacttataaggatcaaatacatatttaagcc 5369295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 11448110 - 11448158
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||| |||||||| || ||| |||||||||||||||||||    
T  11448110 aatttttaaacgacccctaattacagggacgaaatacatatttaagcct 11448158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 35232532 - 35232568
Alignment:
Q  350 gacacttaaaaaggaacggaggaattattatttaaat 386  Q
    |||||||||||||||||||||||| ||||||||||||    
T  35232532 gacacttaaaaaggaacggaggaagtattatttaaat 35232568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 27068979 - 27068908
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| |||||||||| ||| |||||||||||||| |||| ||||  |||||||||    
T  27068979 aggattagcgattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatccttaagccta 27068908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 27934589 - 27934551
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaagga 227  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  27934589 tacagggacaaatttttaaacgacccctaattgcaagga 27934551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 41583612 - 41583661
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| || ||||||||||| |||||||| ||||||| |||||||    
T  41583612 aatttttaaatgacccctaattgcagggatgaaacacatattaaagccta 41583661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 49879559 - 49879596
Alignment:
Q  201 tttttaaacgatccctaattgcaaggatgaaatacata 238  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  49879559 tttttaaacgacccctaattgcaaggatcaaatacata 49879596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 37210121 - 37210153
Alignment:
Q  346 aaaagacacttaaaaaggaacggaggaattatt 378  Q
    |||||||||||||||||||||||||||| ||||    
T  37210121 aaaagacacttaaaaaggaacggaggaagtatt 37210153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 35712115 - 35712045
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  35712115 caaggattagcgaatacatggaccaatttttaaatgatccctaattgcaaggatgaaatacatatttaagc 35712045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 40758462 - 40758540
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||| ||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  40758462 gtttgcaaggattagcgaatacatagaccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagccta 40758540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 40758216 - 40758147
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40758216 aggattagcgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 40758147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 33689457 - 33689381
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||| ||||| ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33689457 gtttgcaagaattagcgaatacatg-accaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 33689381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 3850479 - 3850555
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||  ||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  3850479 gtttccaaggattatcgaatacagggaccaatttttaaacgacccctaattgcagggatgaaatacatatttaagcc 3850555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 36418040 - 36418116
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| | || ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  36418040 gtttgcaaggattagcgaatacaggaaccaatttttaaacgacccctaattacaaggatgaaatacatatttaagcc 36418116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 33689738 - 33689809
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||||| || ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  33689738 aggattagcgattacatgaaccaatttttaaacgacccctaattgcaaagatgaaatacatatttaagccta 33689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 41558239 - 41558306
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatattta 242  Q
    |||||||||| |||||||||||  ||||||||||||| ||||||||||| ||||||||||||||||||    
T  41558239 caaggattagcgaatacatggattaatttttaaacgacccctaattgcagggatgaaatacatattta 41558306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 42342848 - 42342789
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  42342848 tacatggaccaatttttaaacgacccctaattgtaaggatgaaatacatatttaagccta 42342789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 53757075 - 53757150
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||| |||||||||| |||||||||||| |||||||||||||   ||||||||||| |||||||||||||||||||    
T  53757075 gtttgcaaggattagcgaatacatggaccaatttttaaacgacttctaattgcaagaatgaaatacatatttaagc 53757150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 19740999 - 19740921
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| || |||| |||| ||||||||||||||||||||||||| | || |||||||||||||||||||    
T  19740999 gtttgcaaggattagcgattacagggaccaatttttaaacgatccctaattgcatgaatcaaatacatatttaagccta 19740921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 43384635 - 43384709
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    |||| |||||||||  ||||| |  |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43384635 gtttgcaaggattaacgaatatagagacaaatttttaaacgattcctaattgcaaggatgaaatacatatttaag 43384709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 53856408 - 53856486
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||| |||||||||||||||||| |||| ||||||||| ||| ||||| ||||| |||| ||||||||||||||||||    
T  53856408 tgtttgcaaggattagtgaatacaaggaccaatttttaagcgacccctatttgcagggatcaaatacatatttaagcct 53856486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 9292290 - 9292245
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaag 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9292290 aatttttaaacgatccctaattgcaaggatgaaatacatatttaag 9292245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 9294317 - 9294386
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||||||| || || | |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9294317 aggattagcgattatagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 9294386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 23458336 - 23458409
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| || ||||  ||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  23458336 caaggattagcgattacagagaccaatttttaaacgacccataattgcaaggatgaaatacatatttaagccta 23458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 40033837 - 40033886
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40033837 aatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 40033886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 41558079 - 41558006
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||||| ||||||| | || ||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  41558079 caaggattagcgaatacaagtaccaatttttaaacgacccataattgcaagaatgaaatacatatttaagccta 41558006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 51994248 - 51994313
Alignment:
Q  180 attagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||| || |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  51994248 attagcgattacaaggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagc 51994313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 19741253 - 19741321
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||| || |||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  19741253 gattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 19741321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 26463967 - 26464015
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26463967 aatttttaaacgatctctaattgcaaggatgaaatacatatttaagcct 26464015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 40033590 - 40033526
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatat 239  Q
    |||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||| ||||    
T  40033590 caaggattagcgaatacatggatcaatttttaaacgatccttaattgcaaggatgaaatatatat 40033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 51994034 - 51993962
Alignment:
Q  176 aaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||| ||||||| |||| ||||||||||||| | |||||||||| ||| |||||||||||||||||||    
T  51994034 aaggattagcgaatacagggaccaatttttaaacgacctctaattgcaaagatcaaatacatatttaagccta 51993962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 2796248 - 2796177
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| |||||||||| || |||||||||||||||| |||||||||||||||||||    
T  2796248 aggattagcgattacagggaccaatttttaaatgacccctaattgcaaggatcaaatacatatttaagccta 2796177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 2796459 - 2796526
Alignment:
Q  180 attagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||| |||||||||||| ||||||||||| |  |||||||||||||||||| |||||||||||||||    
T  2796459 attagcgaatacatggaccaatttttaaacaactcctaattgcaaggatgaagtacatatttaagcct 2796526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 23458055 - 23457988
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacat 237  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| || ||||||||||||||||||||||    
T  23458055 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaatacat 23457988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 9368658 - 9368723
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatt 240  Q
    ||||||||| ||| |||| |||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  9368658 caaggattaatgattacagggaccaatttttaaacgacccctaattgcaaggacgaaatacatatt 9368723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 34142589 - 34142646
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  34142589 tacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 34142646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 36150579 - 36150530
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  36150579 ggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 36150530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 36417764 - 36417691
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| ||||||| |||| ||||||||||||| |||||||| ||||||||||| |||| |||||    
T  36417764 gtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattacaaggatgaaagacatgtttaa 36417691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 26463703 - 26463635
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||||  ||||||| |||  ||||||||||||| || ||||||||||||||||||||||||||||    
T  26463703 caaggattaccgaatacaaggatcaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 26463635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 42343092 - 42343156
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||| |||||||||||  ||||||||||||| || ||||| ||||||||||||||||||||||    
T  42343092 gattagcgaatacatggatcaatttttaaacgacccttaattacaaggatgaaatacatatttaa 42343156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 9367817 - 9367739
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| |||||||  ||| | ||||||||||| ||||||||| | |||| |||||||||||||||||||    
T  9367817 gtttgcaaggattagcgaatacagagaccattttttaaacgacccctaattgtagggattaaatacatatttaagccta 9367739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 41989575 - 41989613
Alignment:
Q  207 aacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41989575 aacgatccctaattgcaaggatgaaatacatatttaagc 41989613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 3849107 - 3849030
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| |||||||||  ||||||| |||| |||||||||||||  |||||||||| ||||||| | |||||||||||||    
T  3849107 gtttgcaaggattaacgaatacagggaccaatttttaaacgactcctaattgcagggatgaatttcatatttaagcct 3849030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 46475133 - 46475205
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| ||||||| | |  ||||||||||||| ||||||||| |||||||||||||||||||||    
T  46475133 gtttgcaaggattagcgaataca-gtatcaatttttaaacgacccctaattgtaaggatgaaatacatatttaa 46475205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 53856092 - 53856015
Alignment:
Q  169 tgttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||| |||| |||||||||| || |||| ||||||||| ||| ||||| ||||| |||| |||||||||||||||||    
T  53856092 tgtttgcaagaattagtgaatgcaaggaccaatttttaagcgacccctatttgcagggatcaaatacatatttaagcc 53856015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 46474862 - 46474818
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  46474862 aatttttaaacgacccctaattgcaaagatgaaatacatatttaa 46474818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 53756791 - 53756747
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  53756791 aatttttaaacgacccctaattgcaaagatgaaatacatatttaa 53756747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 43384352 - 43384282
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || |||| |||| |||||||||| ||||| ||||||||| |||| ||||||||||| |||||    
T  43384352 aggattagcgattacagggaccaatttttaaaggatccgtaattgcaaagatggaatacatatttcagcct 43384282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 13948847 - 13948778
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||| || ||||||||| |||||||||| ||| |||||||||||||| |||| ||||  |||||||||    
T  13948847 gattagcgattacatggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 13948778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 42855657 - 42855713
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaagg 226  Q
    |||| |||||||||| |||||||||||| |||||||||| ||  |||||||||||||    
T  42855657 gtttgcaaggattagcgaatacatggactaatttttaaatgacgcctaattgcaagg 42855713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 55052363 - 55052295
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||||| |||||||  ||| |||||||| |||| ||||||||  |||||| ||||||||||||||    
T  55052363 caaggattagcgaatacagagaccaatttttagacgacccctaattataaggatcaaatacatatttaa 55052295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 1079592 - 1079651
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||| |||||||||| || ||||||||||| |||||||| ||||||| |||||||    
T  1079592 tacagggaccaatttttaaatgacccctaattgcagggatgaaacacatattaaagccta 1079651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 23276343 - 23276410
Alignment:
Q  178 ggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagc 245  Q
    ||||||| || |||| |||| |||||||||| || ||||||||||| |||||||| ||||||| ||||    
T  23276343 ggattagcgattacagggaccaatttttaaatgacccctaattgcagggatgaaacacatattaaagc 23276410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 3469269 - 3469199
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    ||||||||||| ||||||||| |||||||||| ||  ||||||||||| || |||| ||||  ||||||||    
T  3469269 aggattagtgattacatggactaatttttaaatgacgcctaattgcaaagacgaaacacatcattaagcct 3469199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 21783474 - 21783403
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||||||||| ||||||| | || |||||  |||||| || ||||| ||||||||||||||||||||||    
T  21783474 gtttgcaaggattagcgaatacaggaaccaattt--aaacgacccttaattacaaggatgaaatacatatttaa 21783403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 23272871 - 23272822
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||||  ||||||||||||| |||||||| ||||||| |||||||    
T  23272871 aatttttaaataatccctaattgcagggatgaaagacatattaaagccta 23272822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 41988655 - 41988582
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| ||||||||||||| |||| |||||||||| || || || ||  ||||| ||||||||||||||| ||||    
T  41988655 caagaattagtgaatacagggaccaatttttaaatgacccttatttataaggaggaaatacatatttaaaccta 41988582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 55052619 - 55052675
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||| ||||||||||  | |||||||| ||||||| |||||||||||||||||    
T  55052619 tacatggaccaatttttaaaa-acccctaattacaaggatcaaatacatatttaagcc 55052675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 25107260 - 25107212
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| || ||||||||||| |||||||| ||||| ||||||||    
T  25107260 aatttttaaatgacccctaattgcagggatgaaacacatacttaagcct 25107212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 29686010 - 29685950
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacat 237  Q
    |||||||| || |||| |||| |||||||||| ||  |||||||||||||| |||||||||    
T  29686010 aggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaatacat 29685950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 6436 - 6508
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6436 caaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 6508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 69034 - 68965
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||||| |||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  69034 aggattagtgattacagggaccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagcc 68965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 69317 - 69393
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    |||| |||||||||| ||||||| |||| |||||||||||||   ||||||||||||||||||||||||||||||||    
T  69317 gtttgcaaggattagcgaatacagggaccaatttttaaacgacatctaattgcaaggatgaaatacatatttaagcc 69393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 14505 - 14427
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||| || ||| |||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  14505 gtttgcaaggattagcgaataaatagactaatttttaaacgactcctaattgcaatgatgaaatacatatttaagccta 14427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 14771 - 14818
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  14771 aatttttaaacgacccctaattgcaaggatgaaattcatatttaagcc 14818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 37630 - 37564
Alignment:
Q  180 attagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 246  Q
    ||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||| |||||||||||    
T  37630 attagcgaatacaaggaccaatttttaaacgatctctaattgcaaggatgaaatatatatttaagcc 37564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 37922 - 37992
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||||| || ||||  ||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  37922 aggattagcgattacaaagaccaatttttaaacgactcctaattgcaaggatgaaatacatatttaagcct 37992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 139993 - 140066
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||| |||| ||||||||||||| |||| ||||||||||| | |||||||||||||||| ||||||||||||||    
T  139993 gtttgcaagaattagtgaatacagggaccaatttttaaacaacccctaattgcaaggatcaaatacatatttaa 140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 139741 - 139670
Alignment:
Q  177 aggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||||| || |||| |||| ||||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  139741 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaatccta 139670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 5038 - 4960
Alignment:
Q  170 gttttcaaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||| |||||||||| ||||| | |||  ||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  5038 gtttgcaaggattagcgaatatagggatcaatttttaaacgacccctaattgtagggatgaaatacatatttaagccta 4960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 1836 - 1767
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||| || |||| |||| ||||||| ||||| |||||||||||||||| |||||||||||||||||||    
T  1836 gattagcgattacagggaccaattttttaacgacccctaattgcaaggatcaaatacatatttaagccta 1767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 2117 - 2170
Alignment:
Q  194 ggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  2117 ggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 2170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 2510 - 2558
Alignment:
Q  199 aatttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 247  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  2510 aattttaaaacgatccctaattgcaagaatgaaatacatatttaagcct 2558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 19928 - 19860
Alignment:
Q  175 caaggattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 243  Q
    |||||||||| ||  ||| |||| ||||||||||||| || |||||||||||| |||||||||||||||    
T  19928 caaggattagcgatcacagggaccaatttttaaacgacccataattgcaaggacgaaatacatatttaa 19860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 987 - 918
Alignment:
Q  179 gattagtgaatacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    |||||| || ||||||||| |||||||||| ||| |||||||||||||| |||| ||||  |||||||||    
T  987 gattagcgattacatggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 11509 - 11568
Alignment:
Q  189 tacatggacaaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccta 248  Q
    ||||||||| |||||||||| ||  ||||||||||||||||||| ||||  |||||||||    
T  11509 tacatggactaatttttaaatgacgcctaattgcaaggatgaaacacatcattaagccta 11568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 383
Target Start/End: Complemental strand, 327 - 290
Alignment:
Q  346 aaaagacacttaaaaaggaacggaggaattattattta 383  Q
    |||||||||||||||||||||||||||| || ||||||    
T  327 aaaagacacttaaaaaggaacggaggaagtactattta 290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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