View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17288_high_81 (Length: 205)
Name: NF17288_high_81
Description: NF17288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17288_high_81 |
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Alignment Details
Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 42998063 - 42997889
Alignment:
| Q |
15 |
attatactctccaaccttataaaaaagagaatgaattctttatgcaattactagtacttcaaaaattggatgtatttgtcagattgctttgaagtgccaa |
114 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
42998063 |
attatattctccaaccttataaaaaagagaatgaattctttatgcaattactagtacttcaaaaattggatgtatttgtgagattgctttgaagtgccaa |
42997964 |
T |
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| Q |
115 |
cgtgaaaaaatataaagggtgtccaagatgagcttccattcttccacggatacaatacattaggatctgtatctc |
189 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42997963 |
cgtgaaaaaatataaagggtgtccatgatgagcttccattcttccacggatacaatacattaggatctgtatctc |
42997889 |
T |
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