View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17288_low_14 (Length: 555)

Name: NF17288_low_14
Description: NF17288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17288_low_14
NF17288_low_14
[»] chr1 (55 HSPs)
chr1 (80-417)||(4428704-4429060)
chr1 (455-539)||(4429100-4429184)
chr1 (8-78)||(25934675-25934745)
chr1 (1-78)||(10577676-10577753)
chr1 (430-538)||(4440314-4440422)
chr1 (7-78)||(32461394-32461465)
chr1 (7-78)||(41597411-41597482)
chr1 (1-79)||(12918986-12919064)
chr1 (1-78)||(37598872-37598949)
chr1 (8-84)||(47989556-47989632)
chr1 (8-83)||(46348319-46348394)
chr1 (8-78)||(18337377-18337447)
chr1 (8-78)||(40917808-40917878)
chr1 (1-77)||(29163323-29163399)
chr1 (14-77)||(1486646-1486709)
chr1 (8-78)||(9828103-9828173)
chr1 (8-78)||(22515828-22515898)
chr1 (8-78)||(51410073-51410143)
chr1 (1-74)||(5898211-5898284)
chr1 (1-78)||(30749881-30749958)
chr1 (1-78)||(30771332-30771409)
chr1 (8-77)||(42359391-42359460)
chr1 (14-78)||(31015091-31015155)
chr1 (16-78)||(6427531-6427593)
chr1 (8-78)||(40258874-40258944)
chr1 (309-390)||(4440175-4440256)
chr1 (13-77)||(16297223-16297287)
chr1 (1-65)||(40181912-40181976)
chr1 (148-215)||(4440004-4440071)
chr1 (15-78)||(6414932-6414995)
chr1 (7-78)||(36906055-36906125)
chr1 (1-78)||(52903290-52903364)
chr1 (8-78)||(1815305-1815375)
chr1 (8-74)||(9629834-9629900)
chr1 (12-78)||(18556386-18556452)
chr1 (8-78)||(21032265-21032335)
chr1 (36-78)||(36878542-36878584)
chr1 (1-75)||(39130711-39130785)
chr1 (43-81)||(48415664-48415702)
chr1 (9-78)||(27965941-27966010)
chr1 (30-78)||(15765828-15765876)
chr1 (8-67)||(6612112-6612171)
chr1 (8-78)||(34741894-34741964)
chr1 (28-78)||(1704936-1704986)
chr1 (8-78)||(5944342-5944412)
chr1 (36-78)||(6574053-6574095)
chr1 (8-77)||(11412709-11412779)
chr1 (8-78)||(31694640-31694710)
chr1 (8-78)||(38078602-38078672)
chr1 (25-78)||(34712324-34712377)
chr1 (38-78)||(10572535-10572575)
chr1 (1-49)||(21530730-21530778)
chr1 (7-78)||(32899937-32900009)
chr1 (42-78)||(35702543-35702579)
chr1 (30-78)||(45534131-45534179)
[»] chr2 (35 HSPs)
chr2 (5-78)||(24009340-24009413)
chr2 (8-78)||(36096305-36096375)
chr2 (1-78)||(20242668-20242745)
chr2 (8-78)||(34784912-34784982)
chr2 (8-77)||(2438661-2438730)
chr2 (9-78)||(26769571-26769640)
chr2 (1-78)||(28596510-28596587)
chr2 (8-78)||(30717460-30717530)
chr2 (8-78)||(35056927-35056997)
chr2 (8-78)||(37419802-37419872)
chr2 (1-78)||(34993923-34994000)
chr2 (9-77)||(19942314-19942382)
chr2 (14-78)||(41843500-41843564)
chr2 (23-78)||(18054717-18054772)
chr2 (8-66)||(12224271-12224329)
chr2 (8-78)||(18840954-18841024)
chr2 (8-78)||(38117100-38117170)
chr2 (13-78)||(11223794-11223858)
chr2 (14-78)||(42511323-42511387)
chr2 (8-71)||(5040782-5040845)
chr2 (8-78)||(15972921-15972991)
chr2 (8-78)||(32749755-32749825)
chr2 (8-78)||(37559025-37559095)
chr2 (1-60)||(5367233-5367292)
chr2 (1-75)||(37411188-37411262)
chr2 (9-78)||(27084318-27084387)
chr2 (43-79)||(18255944-18255980)
chr2 (8-79)||(23354581-23354652)
chr2 (8-78)||(22084757-22084830)
chr2 (15-77)||(15657930-15657992)
chr2 (8-77)||(23354926-23354995)
chr2 (8-78)||(44860379-44860449)
chr2 (29-78)||(34006931-34006980)
chr2 (30-78)||(10535686-10535734)
chr2 (15-67)||(14996171-14996222)
[»] chr8 (38 HSPs)
chr8 (8-78)||(34450962-34451032)
chr8 (1-78)||(43737752-43737829)
chr8 (2-78)||(3951477-3951553)
chr8 (14-78)||(26902105-26902169)
chr8 (9-78)||(29447040-29447109)
chr8 (1-78)||(33405325-33405402)
chr8 (1-77)||(926730-926806)
chr8 (1-77)||(3025592-3025668)
chr8 (8-78)||(22652035-22652105)
chr8 (8-78)||(29510234-29510304)
chr8 (8-75)||(5813640-5813707)
chr8 (1-77)||(20679337-20679413)
chr8 (1-71)||(126295-126365)
chr8 (8-78)||(15816059-15816129)
chr8 (8-78)||(18964238-18964308)
chr8 (8-78)||(36450695-36450765)
chr8 (14-78)||(8343381-8343445)
chr8 (14-78)||(16641910-16641974)
chr8 (7-79)||(24205748-24205820)
chr8 (8-76)||(40332239-40332307)
chr8 (15-78)||(6065587-6065650)
chr8 (3-74)||(31109463-31109534)
chr8 (5-78)||(37283756-37283826)
chr8 (8-78)||(21465471-21465541)
chr8 (8-78)||(28745557-28745627)
chr8 (8-78)||(29447503-29447573)
chr8 (1-78)||(14134740-14134817)
chr8 (19-67)||(22943301-22943349)
chr8 (15-78)||(4673355-4673418)
chr8 (7-78)||(11803317-11803388)
chr8 (36-78)||(13436911-13436953)
chr8 (8-78)||(18407767-18407837)
chr8 (8-54)||(26915200-26915246)
chr8 (1-78)||(4786279-4786356)
chr8 (42-79)||(13009422-13009459)
chr8 (1-78)||(24413500-24413577)
chr8 (14-78)||(39820482-39820546)
chr8 (14-74)||(22197676-22197736)
[»] chr3 (45 HSPs)
chr3 (1-78)||(13845466-13845543)
chr3 (1-78)||(35222979-35223056)
chr3 (1-78)||(40993276-40993353)
chr3 (8-78)||(20503513-20503583)
chr3 (8-78)||(55401123-55401193)
chr3 (1-60)||(2941599-2941658)
chr3 (8-78)||(41961580-41961650)
chr3 (8-77)||(4987222-4987291)
chr3 (1-78)||(8789489-8789568)
chr3 (8-77)||(28918049-28918120)
chr3 (8-78)||(10955000-10955073)
chr3 (14-80)||(15864886-15864952)
chr3 (21-79)||(15999950-16000008)
chr3 (8-78)||(25064966-25065036)
chr3 (14-78)||(27505305-27505369)
chr3 (15-78)||(34185053-34185116)
chr3 (8-66)||(7171549-7171607)
chr3 (8-78)||(14209172-14209242)
chr3 (1-78)||(18426990-18427067)
chr3 (160-216)||(9344001-9344057)
chr3 (14-78)||(14216957-14217021)
chr3 (14-78)||(14223086-14223150)
chr3 (13-77)||(29508503-29508567)
chr3 (9-80)||(37077418-37077490)
chr3 (1-72)||(3631725-3631796)
chr3 (3-78)||(4466541-4466616)
chr3 (1-80)||(24633341-24633419)
chr3 (8-78)||(15796224-15796294)
chr3 (1-78)||(8842370-8842447)
chr3 (5-78)||(11252021-11252094)
chr3 (14-78)||(10690193-10690257)
chr3 (8-52)||(14832158-14832202)
chr3 (20-75)||(11666015-11666070)
chr3 (11-78)||(26492146-26492213)
chr3 (7-78)||(55213020-55213091)
chr3 (36-78)||(4990913-4990955)
chr3 (8-77)||(25775557-25775624)
chr3 (28-78)||(40052380-40052430)
chr3 (1-77)||(24204983-24205059)
chr3 (30-78)||(1389908-1389956)
chr3 (7-78)||(25074841-25074913)
chr3 (7-78)||(27903684-27903756)
chr3 (35-79)||(34910392-34910436)
chr3 (4-40)||(45451597-45451633)
chr3 (18-78)||(49651717-49651777)
[»] chr5 (45 HSPs)
chr5 (1-75)||(30098982-30099056)
chr5 (8-78)||(6401557-6401627)
chr5 (8-78)||(21814320-21814390)
chr5 (8-78)||(21576686-21576756)
chr5 (1-78)||(42029793-42029870)
chr5 (1-77)||(30502330-30502406)
chr5 (1-77)||(30542673-30542749)
chr5 (4-76)||(39268541-39268613)
chr5 (8-78)||(21522809-21522879)
chr5 (8-78)||(21533375-21533445)
chr5 (8-78)||(21542089-21542159)
chr5 (8-77)||(21190998-21191067)
chr5 (1-78)||(43564922-43564999)
chr5 (1-83)||(17123089-17123170)
chr5 (8-78)||(39698600-39698670)
chr5 (15-76)||(19452998-19453059)
chr5 (14-78)||(31084382-31084446)
chr5 (14-77)||(43001859-43001922)
chr5 (1-66)||(26312810-26312875)
chr5 (1-78)||(28588615-28588692)
chr5 (8-76)||(18592132-18592200)
chr5 (14-78)||(30098391-30098455)
chr5 (15-78)||(14873577-14873640)
chr5 (8-67)||(15382533-15382592)
chr5 (8-78)||(7677764-7677834)
chr5 (1-47)||(23012380-23012426)
chr5 (8-77)||(19579760-19579829)
chr5 (13-74)||(21194068-21194129)
chr5 (13-78)||(27932288-27932353)
chr5 (17-77)||(23015926-23015986)
chr5 (7-78)||(16304367-16304438)
chr5 (30-77)||(41995534-41995581)
chr5 (8-78)||(3966562-3966632)
chr5 (28-78)||(23289999-23290049)
chr5 (19-77)||(24238603-24238661)
chr5 (30-72)||(32426832-32426874)
chr5 (8-78)||(32766873-32766943)
chr5 (13-75)||(36642696-36642757)
chr5 (8-78)||(42893408-42893478)
chr5 (30-75)||(4105329-4105374)
chr5 (15-78)||(19820329-19820389)
chr5 (1-78)||(32630676-32630753)
chr5 (27-71)||(17088358-17088402)
chr5 (42-78)||(35017125-35017161)
chr5 (14-78)||(40000494-40000558)
[»] chr6 (40 HSPs)
chr6 (8-78)||(18367895-18367965)
chr6 (8-78)||(16488520-16488590)
chr6 (8-78)||(34595182-34595252)
chr6 (14-78)||(17327591-17327655)
chr6 (14-77)||(12696383-12696446)
chr6 (8-76)||(32978842-32978910)
chr6 (1-79)||(9658920-9658999)
chr6 (8-78)||(8365449-8365519)
chr6 (8-78)||(10339055-10339125)
chr6 (8-78)||(28152146-28152216)
chr6 (1-78)||(13789195-13789272)
chr6 (1-78)||(13797814-13797891)
chr6 (1-78)||(33001230-33001307)
chr6 (14-78)||(31384984-31385048)
chr6 (8-78)||(4877991-4878060)
chr6 (1-76)||(7996325-7996396)
chr6 (1-76)||(8022405-8022476)
chr6 (8-78)||(16766756-16766826)
chr6 (12-78)||(17841530-17841596)
chr6 (8-78)||(28715343-28715413)
chr6 (1-78)||(7378020-7378097)
chr6 (1-36)||(30851641-30851676)
chr6 (8-78)||(34446618-34446689)
chr6 (8-78)||(7248417-7248487)
chr6 (20-78)||(8776909-8776967)
chr6 (8-78)||(9107300-9107370)
chr6 (30-78)||(4388150-4388198)
chr6 (1-77)||(7265535-7265611)
chr6 (43-78)||(10649371-10649406)
chr6 (8-78)||(8714039-8714109)
chr6 (4-78)||(13364646-13364720)
chr6 (8-78)||(24645529-24645599)
chr6 (24-78)||(31959214-31959268)
chr6 (1-78)||(13360314-13360390)
chr6 (1-78)||(32511607-32511684)
chr6 (30-78)||(7938170-7938218)
chr6 (9-76)||(8389411-8389478)
chr6 (7-59)||(9522949-9523001)
chr6 (14-78)||(9629448-9629512)
chr6 (14-74)||(24138485-24138545)
[»] chr4 (43 HSPs)
chr4 (8-78)||(5414102-5414172)
chr4 (8-78)||(23292927-23292997)
chr4 (8-79)||(30982807-30982878)
chr4 (1-78)||(19097836-19097912)
chr4 (8-78)||(12323968-12324038)
chr4 (8-74)||(49431074-49431140)
chr4 (9-78)||(24613631-24613700)
chr4 (8-78)||(46083921-46083991)
chr4 (1-78)||(12895215-12895292)
chr4 (14-78)||(3947702-3947766)
chr4 (13-79)||(848015-848081)
chr4 (8-78)||(2361916-2361986)
chr4 (8-78)||(19482727-19482797)
chr4 (8-78)||(19500788-19500858)
chr4 (8-78)||(28964189-28964259)
chr4 (8-78)||(34306745-34306815)
chr4 (21-78)||(715546-715603)
chr4 (21-78)||(752872-752929)
chr4 (14-78)||(36635384-36635448)
chr4 (25-76)||(28084589-28084640)
chr4 (19-78)||(29205527-29205586)
chr4 (8-78)||(53381531-53381602)
chr4 (8-78)||(16073442-16073512)
chr4 (16-78)||(32273462-32273524)
chr4 (9-78)||(8423659-8423728)
chr4 (14-79)||(14465005-14465070)
chr4 (1-78)||(35157926-35158003)
chr4 (18-78)||(18966567-18966627)
chr4 (43-82)||(4383449-4383488)
chr4 (3-78)||(4672026-4672101)
chr4 (8-75)||(12797282-12797349)
chr4 (3-78)||(23861370-23861445)
chr4 (8-78)||(24343560-24343631)
chr4 (8-78)||(22234820-22234890)
chr4 (8-74)||(30838269-30838335)
chr4 (16-78)||(35161092-35161154)
chr4 (21-78)||(3064869-3064926)
chr4 (8-77)||(4157197-4157266)
chr4 (8-77)||(4157484-4157553)
chr4 (28-77)||(22440559-22440608)
chr4 (1-34)||(54580008-54580041)
chr4 (42-78)||(5775305-5775341)
chr4 (1-37)||(36509074-36509110)
[»] chr7 (35 HSPs)
chr7 (1-78)||(18212974-18213051)
chr7 (14-78)||(5409772-5409836)
chr7 (14-78)||(9778559-9778623)
chr7 (3-78)||(32287404-32287479)
chr7 (8-78)||(598256-598326)
chr7 (8-78)||(24339701-24339771)
chr7 (1-78)||(15680850-15680927)
chr7 (1-76)||(39138485-39138560)
chr7 (8-78)||(21880200-21880270)
chr7 (1-78)||(20549832-20549909)
chr7 (14-78)||(32093955-32094020)
chr7 (14-78)||(43027405-43027469)
chr7 (11-78)||(25822717-25822784)
chr7 (8-78)||(21864856-21864926)
chr7 (8-78)||(33994260-33994330)
chr7 (9-78)||(7438766-7438835)
chr7 (21-78)||(29763130-29763187)
chr7 (14-78)||(1433513-1433577)
chr7 (7-78)||(7133213-7133285)
chr7 (36-76)||(8842282-8842322)
chr7 (14-74)||(13770750-13770810)
chr7 (11-78)||(4794951-4795018)
chr7 (16-78)||(17852056-17852118)
chr7 (1-67)||(26733345-26733411)
chr7 (36-78)||(35862027-35862069)
chr7 (1-50)||(5835288-5835337)
chr7 (14-79)||(20545184-20545249)
chr7 (1-78)||(22484066-22484143)
chr7 (8-77)||(26033392-26033461)
chr7 (1-70)||(41918906-41918975)
chr7 (14-78)||(2334314-2334378)
chr7 (30-78)||(6490786-6490834)
chr7 (8-40)||(9933332-9933364)
chr7 (1-68)||(12278876-12278943)
chr7 (30-78)||(28155624-28155672)
[»] scaffold0623 (1 HSPs)
scaffold0623 (11-78)||(5926-5993)
[»] scaffold0306 (1 HSPs)
scaffold0306 (8-77)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (8-77)||(21804-21873)
[»] scaffold0652 (1 HSPs)
scaffold0652 (8-78)||(403-473)
[»] scaffold0003 (1 HSPs)
scaffold0003 (8-78)||(241653-241723)
[»] scaffold0380 (1 HSPs)
scaffold0380 (8-78)||(8649-8719)
[»] scaffold0083 (1 HSPs)
scaffold0083 (8-78)||(45471-45541)
[»] scaffold0053 (1 HSPs)
scaffold0053 (8-78)||(8846-8916)
[»] scaffold0019 (1 HSPs)
scaffold0019 (8-78)||(71784-71854)
[»] scaffold0004 (1 HSPs)
scaffold0004 (13-79)||(92875-92941)
[»] scaffold0361 (1 HSPs)
scaffold0361 (13-78)||(14580-14645)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-76)||(70319-70394)
[»] scaffold0512 (1 HSPs)
scaffold0512 (8-78)||(4977-5047)
[»] scaffold0475 (1 HSPs)
scaffold0475 (8-78)||(3356-3426)
[»] scaffold0450 (1 HSPs)
scaffold0450 (8-78)||(8565-8635)
[»] scaffold0793 (1 HSPs)
scaffold0793 (21-78)||(4822-4879)
[»] scaffold0044 (1 HSPs)
scaffold0044 (8-72)||(53239-53303)
[»] scaffold0136 (1 HSPs)
scaffold0136 (8-78)||(3779-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (8-78)||(2987-3057)
[»] scaffold0036 (1 HSPs)
scaffold0036 (8-77)||(9678-9747)
[»] scaffold0227 (1 HSPs)
scaffold0227 (34-78)||(15045-15089)
[»] scaffold0154 (1 HSPs)
scaffold0154 (8-78)||(13472-13542)
[»] scaffold0057 (1 HSPs)
scaffold0057 (8-78)||(24083-24154)
[»] scaffold0008 (1 HSPs)
scaffold0008 (8-77)||(263303-263372)
[»] scaffold0697 (1 HSPs)
scaffold0697 (1-49)||(1685-1733)


Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-150; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 80 - 417
Target Start/End: Original strand, 4428704 - 4429060
Alignment:
Q  80 tttcacccatttatgcgccttctcatcaagcctaaacaccttaatccaaaaaacactgtcaccactagcaaaacctaaaaactcataaatgaccactagc 179  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428704 tttcacccatttacgcgccttctcatcaagcctaaacaccttaatccaaaaaacactgtcaccactagcaaaacctaaaaactcataaatgaccactagc 4428803  T
Q  180 aacaacttgccctcactctccactaagaattttttgttaccaccaagaacaggttcaaaatcagattcaggtggttcagccactaaccaagcattcaagt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4428804 aacaacttgccctcactctccactaagaattttttgttaccaccaagaagaggttcagaatcagattcaggtggttcagccactaaccaagcattcaagt 4428903  T
Q  280 catcca--------------gtcttaccaattctattgatagcataaggccgccttttgaaaatgcagatgtctcccaagtacatagacatatcaggaat 365  Q
    ||||||              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428904 catccagtccaacagtaattgtcttaccaattctattgatagcataaggccgccttttgaaaatgcagatgtctcccaagtacatagacatatcaggaat 4429003  T
Q  366 cacattcc-----aatgttcatctccgttgcatttcaccaatattgattttggggca 417  Q
    ||||||||     ||||||||||||||||||| || |||||||||||||||||||||    
T  4429004 cacattccaatgtaatgttcatctccgttgcagttaaccaatattgattttggggca 4429060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 539
Target Start/End: Original strand, 4429100 - 4429184
Alignment:
Q  455 tcttttcggggtaaatatagtgatagggcaatctttgttcgctgtgaataatgtaatcatgtcctaattgaagtacacaaagttg 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  4429100 tcttttcggggtaaatatagtgatagggcaatctttgttcgctgtgaataatgtaatcatttactaattgaagtacacaaagttg 4429184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 25934675 - 25934745
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25934675 gtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 25934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10577753 - 10577676
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10577753 attatatgtgtcgggggcggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 430 - 538
Target Start/End: Original strand, 4440314 - 4440422
Alignment:
Q  430 ttttctttgcacgtgacagcaacgatcttttcggggtaaatatagtgatagggcaatctttgttcgctgtgaataatgtaatcatgtcctaattgaagta 529  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| | | || ||| |||||||||||| |||||||||||||| |||||||| |||||    
T  4440314 ttttctttgcacgtgacagcaacgatcttttcagggtaaacatagtcacatggtaatatttgttcgctgtcaataatgtaatcatttcctaattcaagta 4440413  T
Q  530 cacaaagtt 538  Q
    || ||||||    
T  4440414 cataaagtt 4440422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 32461465 - 32461394
Alignment:
Q  7 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  32461465 tgtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcata 32461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 41597482 - 41597411
Alignment:
Q  7 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  41597482 tgtgtccgtgtcggacacgacacgtgtctgacacggggatacgctttatccaaggagtgtctgtgcttcata 41597411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12918986 - 12919064
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||||||    
T  12918986 attatatgtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcatat 12919064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37598872 - 37598949
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| ||||||||||||||||||||||||||| ||||  ||||||||||| |||| ||||||||||||||||||||    
T  37598872 attataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcata 37598949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 47989556 - 47989632
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatattttca 84  Q
    |||||||||||||||||||||| |||||||||  ||||||||||| |||| |||||||||||||||||||| |||||    
T  47989556 gtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatagtttca 47989632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 46348394 - 46348319
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatattttc 83  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||| |||| ||| |||||||||||||||| ||||    
T  46348394 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatagtttc 46348319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 18337377 - 18337447
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| ||||||||| ||||| |||||| |||| |||| ||||||||||||||||||||    
T  18337377 gtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcata 18337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 40917808 - 40917878
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| |||| |||| |||||||||||||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29163399 - 29163323
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| || |||  || ||||| ||||||||||    
T  29163399 attatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 1486709 - 1486646
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||| |||||||||    
T  1486709 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 9828103 - 9828173
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||| ||||||||||||||| ||||| |||||||| || |||| ||||||||||||||||||||    
T  9828103 gtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 22515898 - 22515828
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||| | || ||||| | ||||||||| |||| ||||||||||||||||||||    
T  22515898 gtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 22515828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 51410073 - 51410143
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||| || ||||| | ||||||||| ||||||||||| | |||||||||||    
T  51410073 gtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcata 51410143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5898284 - 5898211
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 74  Q
    |||||||| ||||||||| |||||||||||||||  |||| |||||||| || |||| ||||||||||||||||    
T  5898284 attatatgcgtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30749881 - 30749958
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||| |||| |||| | |||||||||| |||||||||    
T  30749881 attatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatgcttcata 30749958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30771332 - 30771409
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||| |||| |||| | |||||||||| |||||||||    
T  30771332 attatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatgcttcata 30771409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 42359460 - 42359391
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||||||| |||  ||||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  42359460 gtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 31015091 - 31015155
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||  || ||||||||||    
T  31015091 gtgtcggacacgacacgtgtctgacatcgggacacgcctaatccaaggaggatcagtgcttcata 31015155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 6427531 - 6427593
Alignment:
Q  16 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||| ||||| ||||||||||| |||  | ||||||||||||||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcata 6427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 40258944 - 40258874
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||||||||| |||| |||||  |||||||||| |||| |||||||||| |||||||||    
T  40258944 gtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 4440175 - 4440256
Alignment:
Q  309 ataaggccgccttttgaaaatgcagatgtctcccaagtacatagacatatcaggaatcacattccaatgttcatctccgttg 390  Q
    ||||||||||| |||||||| |||||||||  ||||||  ||||||||||||| |||||||  ||||  |||||||||||||    
T  4440175 ataaggccgccctttgaaaacgcagatgtcaaccaagtttatagacatatcagtaatcacacaccaaatttcatctccgttg 4440256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 16297287 - 16297223
Alignment:
Q  13 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||||||  ||||| |||||  |||||||||| |||| |||||||||||||||||||    
T  16297287 ggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40181912 - 40181976
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtg 65  Q
    ||||||||| |||||||||||||| |||||||||  |||| ||||||||||| |||| |||||||    
T  40181912 attatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 4440004 - 4440071
Alignment:
Q  148 caaaacctaaaaactcataaatgaccactagcaacaacttgccctcactctccactaagaattttttg 215  Q
    ||||||||||| ||||||| ||| ||||| ||| ||||   |||||||||||||||||||||||||||    
T  4440004 caaaacctaaacactcatagatgtccactcgcagcaacgcaccctcactctccactaagaattttttg 4440071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 6414995 - 6414932
Alignment:
Q  15 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||| | |||||   | |||| ||||||||||||||||||||    
T  6414995 tgtcggacacgacacgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgcttcata 6414932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 36906055 - 36906125
Alignment:
Q  7 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||||||||||||| || ||||||||| ||||||| ||| || ||| ||||||||||||||||||    
T  36906055 tgtgtcagtgtcggacacgacccgcgtctgacactgggacacacctaatgcaa-gagtgtccgtgcttcata 36906125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 52903290 - 52903364
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||    ||||| ||||| |||||||| ||||| | | ||||||||||||||||||    
T  52903290 attatatgtgtcggtgtcggacacg---tgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcata 52903364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 1815305 - 1815375
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||||||||| |||| ||||| ||||||||||| |||  ||||||| ||||| ||||||    
T  1815305 gtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcata 1815375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 9629900 - 9629834
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 74  Q
    |||||| ||||||||||||||| |||| ||||| |||||||| ||  |||||| |||||||||||||    
T  9629900 gtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 18556452 - 18556386
Alignment:
Q  12 cggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| ||| |||||||| || ||||| ||||||||||| |||| || |||||||||||||||||    
T  18556452 cggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcata 18556386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 21032265 - 21032335
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| |||||||||||||||| ||||| ||||  | || |||||| |||||||||||||| ||||||||||    
T  21032265 gtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 36878542 - 36878584
Alignment:
Q  36 gacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  36878542 gacacggggacacgcctaatcccaggagtgtccgtgcttcata 36878584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39130785 - 39130711
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 75  Q
    |||||||||||||||||||||||| |||||||   ||||  ||||||||| | |||||| |||||||| ||||||    
T  39130785 attatatgtgtcggtgtcggacacaacacgtgctcgacattgggacacgcttaatccaaagagtgtccatgcttc 39130711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 48415702 - 48415664
Alignment:
Q  43 ggacacgccttatccaaggagtgtccgtgcttcatattt 81  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  48415702 ggacacgcctaatccaaggagtgtccgtgcttcatattt 48415664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 27966010 - 27965941
Alignment:
Q  9 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| ||||| |||||| | |||| ||||||| ||||||||||| |||| |||||||||| |||||||||    
T  27966010 tgtccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgaggagtgtccatgcttcata 27965941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 15765828 - 15765876
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||||||||| |||| | ||||||||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcata 15765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 6612171 - 6612112
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 67  Q
    |||||| |||||||||||| | ||||| |||||  |||||||||| ||||||||||||||    
T  6612171 gtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 34741894 - 34741964
Alignment:
Q  8 gtgtcggtgtcggacacgaca-cgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| |||||| ||||||||| |||||| |||||||| |||||||| |||| | ||||||||||||||||||    
T  34741894 gtgttggtgtctgacacgacaacgtgtccgacacggg-acacgcctaatccgaagagtgtccgtgcttcata 34741964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 1704986 - 1704936
Alignment:
Q  28 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| ||||| | ||||||||| ||||||||||||||| |||||||||    
T  1704986 acgtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcata 1704936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 5944342 - 5944412
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| || ||||||| |||| |||| ||||| |||| |||||| |||| |||||||| |||||||||||    
T  5944342 gtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcata 5944412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 6574053 - 6574095
Alignment:
Q  36 gacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||    
T  6574053 gacactgggacacgcctaatccaaggagtgaccgtgcttcata 6574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 11412779 - 11412709
Alignment:
Q  8 gtgtcggtgtcggacacga-cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||| |||||| | || ||||| |||||  ||||| ||||||||| |||||||||||||||||||    
T  11412779 gtgtcggtgttggacaccaacatgtgtccgacactaggacatgccttatcctaggagtgtccgtgcttcat 11412709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 31694710 - 31694640
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| |||| | |  ||||| || |||||||| |||  ||||||||||||||||||||    
T  31694710 gtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcata 31694640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 38078672 - 38078602
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||| |||   ||||  |||||||||| |||| |||||| | |||||||||||    
T  38078672 gtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcata 38078602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 34712377 - 34712324
Alignment:
Q  25 gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||  |||| |||||||| || || ||||||||||||||||||||||    
T  34712377 gacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcata 34712324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 10572575 - 10572535
Alignment:
Q  38 cacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  10572575 cacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21530730 - 21530778
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 49  Q
    |||||| |||||||||||||||||||||| |||| |||||  |||||||    
T  21530730 attataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 32899937 - 32900009
Alignment:
Q  7 tgtgtcggtgtcggaca-cgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| |||| | |||| ||||| ||||||| ||| |||| |||| ||||| |||||||||    
T  32899937 tgtgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcata 32900009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 35702579 - 35702543
Alignment:
Q  42 gggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcata 35702543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 45534179 - 45534131
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||  |||||||||||||||| ||||||||  ||||||||||    
T  45534179 gtgtctgacatagggacacgccttatccgaggagtgtttgtgcttcata 45534131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 24009340 - 24009413
Alignment:
Q  5 tatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24009340 tatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 24009413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 36096375 - 36096305
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  36096375 gtgtcgatgtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgcttcata 36096305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20242745 - 20242668
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||| ||||||||||    
T  20242745 attatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcata 20242668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 34784982 - 34784912
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  34784982 gtgtcggtatcggacacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcata 34784912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  2438730 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 26769571 - 26769640
Alignment:
Q  9 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  26769571 tgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcata 26769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28596510 - 28596587
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| ||||||||||||||||||||||||||| |||||  |||||| ||| |||| ||||||||||||||||||||    
T  28596510 attataagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 30717530 - 30717460
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||||||||||||||||||  ||||| |||| |||||| |||||||||||||||||||||||||    
T  30717530 gtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcata 30717460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 35056927 - 35056997
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| |||||||  |||||||| |||  ||||||||||||||||||||    
T  35056927 gtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcata 35056997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 37419802 - 37419872
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||  |||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34994000 - 34993923
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||| |||||| |||||||| ||||| ||||| ||||||||||| || |||||||||| |||||||||||    
T  34994000 attatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcata 34993923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  9 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| |||| |||||||||| ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 41843500 - 41843564
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  41843500 gtgtcggacgcgacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcata 41843564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 18054772 - 18054717
Alignment:
Q  23 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  18054772 acgacacgtgtctgacacggaaacacgccttatccaaggaatgtccgtgcttcata 18054717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 12224271 - 12224329
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 66  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||    
T  12224271 gtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 18841024 - 18840954
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||||||||| |||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  18841024 gtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 18840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 38117170 - 38117100
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| |||||||||||| ||||||||| ||||| ||||||||||| |||| ||| ||||||||||||||||    
T  38117170 gtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcata 38117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 11223858 - 11223794
Alignment:
Q  13 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||  ||||||||||||||||||||    
T  11223858 ggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 11223794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 42511387 - 42511323
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||||||| ||||| |||||||| || |||| ||||||||||||||||||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcata 42511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 5040782 - 5040845
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 71  Q
    ||||||||||||||||||||| ||||| ||| | |||||||||||  |||||||||||||||||    
T  5040782 gtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtccgtg 5040845  T

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Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 15972921 - 15972991
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||| | ||||||| ||| |||| | || |||||||||||||||    
T  15972921 gtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcata 15972991  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 32749825 - 32749755
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| ||||||||  |||| ||||| ||||| ||||||||||||||| |||||||||||| ||||||||    
T  32749825 gtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcata 32749755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 37559025 - 37559095
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||  |||||||||| ||||| || |||||| | |||| ||||||||||||||||||||    
T  37559025 gtgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcata 37559095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5367233 - 5367292
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaag 60  Q
    ||||||||||||||||||||||||||||| | || ||| | ||||||||||| |||||||    
T  5367233 attatatgtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37411262 - 37411188
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 75  Q
    ||||||||||||| ||||| ||||||| |||||| ||||| |||||||||||  ||| ||||||| | |||||||    
T  37411262 attatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgcctagtccgaggagtgcctgtgcttc 37411188  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 27084318 - 27084387
Alignment:
Q  9 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||  |||| | ||||||||| |||  |||||||||  |||||||||    
T  27084318 tgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcata 27084387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 18255980 - 18255944
Alignment:
Q  43 ggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    |||||||||| ||||||||||||||||||||||||||    
T  18255980 ggacacgcctaatccaaggagtgtccgtgcttcatat 18255944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 23354652 - 23354581
Alignment:
Q  8 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    ||||||| ||||||||| |||  |||||||||||||| |||||||| |||| ||||||||||||| |||||||    
T  23354652 gtgtcggggtcggacaccgaccggtgtctgacacggg-acacgcctaatccgaggagtgtccgtggttcatat 23354581  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 22084830 - 22084757
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctga---cacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||||||||| ||||||||||||   ||| ||||||||||| |||| | ||||||| ||||||||||    
T  22084830 gtgtcagtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatccgatgagtgtctgtgcttcata 22084757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 15657930 - 15657992
Alignment:
Q  15 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||| ||||||||||| ||| | |||||||||||  ||| |||||||||| ||||||||    
T  15657930 tgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 23354995 - 23354926
Alignment:
Q  8 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||| || |||||| ||| ||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  23354995 gtgtcggggttggacaccgacccgtgtctgacacggg-acacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 44860379 - 44860449
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| ||||| |||||||||| ||||| ||||  ||||||| ||| || | ||||||||||||||||||||    
T  44860379 gtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 34006980 - 34006931
Alignment:
Q  29 cgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||| || |||| ||| || ||||||||||||||||||||||    
T  34006980 cgtgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcata 34006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 10535734 - 10535686
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||  |||||||||| |||| |||||||| |||||||||||    
T  10535734 gtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcata 10535686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 14996222 - 14996171
Alignment:
Q  15 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 67  Q
    |||||||||| ||||||||||||||| || |||||||| |||| |||||||||    
T  14996222 tgtcggacac-acacgtgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 7e-32; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 34451032 - 34450962
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34451032 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 34450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 43737829 - 43737752
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43737829 attatatgtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 3951553 - 3951477
Alignment:
Q  2 ttatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  3951553 ttatatgtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcata 3951477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 26902169 - 26902105
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  26902169 gtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgcttcata 26902105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 29447109 - 29447040
Alignment:
Q  9 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||| |||||||||||  |||||||||| |||| ||||||||||||||||||||    
T  29447109 tgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33405402 - 33405325
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||| || |||||| ||||||||||||| ||||    
T  33405402 attatatgtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccata 33405325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 926806 - 926730
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||| ||||||||||||||| ||||||||||| ||||| |||||| || |||||| |||||||||||||||||||    
T  926806 attataagtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3025592 - 3025668
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||| ||||| ||||||||||||||||||||||||||| | |||||| || |||| |||||||||||||||||||    
T  3025592 attataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 22652035 - 22652105
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| || |||| ||||||||||||||||||||    
T  22652035 gtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 29510304 - 29510234
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  29510304 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 29510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 5813640 - 5813707
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 75  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| ||   |||||||||||||||||    
T  5813640 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20679413 - 20679337
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||| ||||||||||| ||| | ||||||||| ||||| ||||||||||||| || |||||||||| ||||||||    
T  20679413 attataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 126365 - 126295
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 71  Q
    |||||||||||| |||||||||||||||||||||  | || |||||||| || |||| |||||||||||||    
T  126365 attatatgtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 15816129 - 15816059
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| ||||||||||||||||||  || ||||| ||||||||||| |||| || |||||||||||||||||    
T  15816129 gtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 18964238 - 18964308
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| || | ||||||||| ||||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  18964238 gtgtcggcgttgaacacgacacctgtctaacacggagacacgccttatccgaggagtgtctgtgcttcata 18964308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 36450765 - 36450695
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| ||||||||||||||| |||||| |||||  |||||||||| |||| ||||||||| ||||||||||    
T  36450765 gtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcata 36450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 8343381 - 8343445
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||||||||||||| ||||| ||||||||||| |||| | ||||||| ||||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcata 8343445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 16641974 - 16641910
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||| |||||| |||| ||||||| ||| |||| ||||||||| ||||||||||    
T  16641974 gtgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcata 16641910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 24205820 - 24205748
Alignment:
Q  7 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    ||||||||||||| |||| || | |||||||||| || |||||||| |||| ||||||||||||| |||||||    
T  24205820 tgtgtcggtgtcgaacacaacgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcatat 24205748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 40332239 - 40332307
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    |||||||||| ||||||||||||||||  |||| ||||| ||||| |||| ||||||||||||| ||||    
T  40332239 gtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 6065650 - 6065587
Alignment:
Q  15 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||| |||| ||||| || |||||| | || ||||||||||||||||||||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcata 6065587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 31109534 - 31109463
Alignment:
Q  3 tatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 74  Q
    |||||||||| |||||||||| |   ||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  31109534 tatatgtgtcagtgtcggacatgtgtcgtgtatgacactgggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 37283826 - 37283756
Alignment:
Q  5 tatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||| |||||||||||||||||   || |||||||| || |||| ||||||| ||||||||||||    
T  37283826 tatgtgtcggtgtgggacacgacacgtgtct---accgggacacgtctaatccgaggagtgcccgtgcttcata 37283756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 21465471 - 21465541
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| |||||||||||||||||||||  |||| |||| |||||| ||   ||||||||||||||||||||    
T  21465471 gtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcata 21465541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 28745557 - 28745627
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||| |||| | ||| | |||| | || || ||||||||||||||||||||||    
T  28745557 gtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcata 28745627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 29447503 - 29447573
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||||||| ||||| ||||| |||||| | || |||  ||||||||||||||||||||    
T  29447503 gtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcata 29447573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14134740 - 14134817
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| ||||||||||  |||||||||||||| | |||  |||||||||| || | ||||||||||||| ||||||    
T  14134740 attatatatgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcata 14134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 22943349 - 22943301
Alignment:
Q  19 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 67  Q
    |||||||||||||||| ||||| ||||||||||| |||| |||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 4673418 - 4673355
Alignment:
Q  15 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||| | | || ||||| || |||||||| |||||||||||||| ||||||||||    
T  4673418 tgtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcata 4673355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 11803317 - 11803388
Alignment:
Q  7 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||| ||| ||||||| |||| ||||| || ||||| || |||| ||||||||||||||||||||    
T  11803317 tgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcata 11803388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 13436953 - 13436911
Alignment:
Q  36 gacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||    
T  13436953 gacaccgggacacgcctaatccaaggagtgtctgtgcttcata 13436911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 18407767 - 18407837
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| || |||||||||||| |||| |||||  |||||||||| ||   ||||||||||||||||||||    
T  18407767 gtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcata 18407837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 26915246 - 26915200
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctta 54  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||    
T  26915246 gtgtcggtgtcggacacgatacgtgtcagacattgggacacgcctta 26915200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4786356 - 4786279
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| |||||| ||||  || |  | |||| | ||||| ||| ||||||||||||||||||    
T  4786356 attatatgtgtcggtgtcggatacgacatgtgttcgataacgagacatggcttattcaaagagtgtccgtgcttcata 4786279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 13009459 - 13009422
Alignment:
Q  42 gggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  13009459 gggacacgcctaatccaaggagcgtccgtgcttcatat 13009422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24413577 - 24413500
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| ||||| |||||||||||||  ||||||  |||  |||||||| || |||| || |||||||||||||||||    
T  24413577 attataagtgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcata 24413500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 39820482 - 39820546
Alignment:
Q  14 gtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||| |||||| |||||||| |||||||| |||| || |||||||||||||||||    
T  39820482 gtgtcggacaccgacgcgtgtccgacacggg-acacgcctaatccgagaagtgtccgtgcttcata 39820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 22197736 - 22197676
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 74  Q
    |||||||||| |||||||||| ||||| ||  ||||||| |||  ||||||||||||||||    
T  22197736 gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctt 22197676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 3e-31; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13845543 - 13845466
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13845543 attatatgtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcata 13845466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 35222979 - 35223056
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  35222979 attatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcata 35223056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40993353 - 40993276
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |||| |||||||||| |||||||||    
T  40993353 attatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcata 40993276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 20503513 - 20503583
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  20503513 gtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 20503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 55401123 - 55401193
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  55401123 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2941599 - 2941658
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaag 60  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  2941599 attatatgtgtcggtgtcggacacgacacgtgtctgacatggggatatgccttatccaag 2941658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 41961650 - 41961580
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcata 41961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 4987291 - 4987222
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| |||| |||||||||||| ||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8789568 - 8789489
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacg--tgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||||||   |||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  8789568 attatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 28918049 - 28918120
Alignment:
Q  8 gtgtcggtgtcg--gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||  ||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||    
T  28918049 gtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 10955000 - 10955073
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaagg---agtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||   |||||||||||||||||    
T  10955000 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 10955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 15864886 - 15864952
Alignment:
Q  14 gtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatatt 80  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  15864886 gtgtcggacaccgacacgtgtctgacacggg-acacgcctaatccaaagagtgtccgtgcttcatatt 15864952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 16000008 - 15999950
Alignment:
Q  21 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcatat 15999950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 25064966 - 25065036
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| |||||||||||||||||||||||||||| ||||||||  |||||| |||||||| |||||| ||||    
T  25064966 gtgttggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgttcgtgctccata 25065036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 27505305 - 27505369
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||||||||||||| ||||| |||||| |||| |||| ||||||||||||||||||||    
T  27505305 gtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcata 27505369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 34185116 - 34185053
Alignment:
Q  15 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| |||| ||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  34185116 tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 7171549 - 7171607
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 66  Q
    |||| |||||||||||||||||||||| ||||| | ||||||||| |||||||||||||    
T  7171549 gtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 14209172 - 14209242
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||  ||||  |||| || ||| ||||||| |||||||||||||||||    
T  14209172 gtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcata 14209242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18426990 - 18427067
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| ||||||||||||| |||||||||||| | ||| ||||||| ||| |||  ||||||||||||| ||||||    
T  18426990 attatatatgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcata 18427067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 9344001 - 9344057
Alignment:
Q  160 actcataaatgaccactagcaacaacttgccctcactctccactaagaattttttgt 216  Q
    ||||||||||| |||||||||||||||  ||||| ||||| ||||||||||||||||    
T  9344001 actcataaatgtccactagcaacaactctccctctctctcgactaagaattttttgt 9344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 14216957 - 14217021
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||  ||||| ||||||| ||| |||| || |||||||||||||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 14223086 - 14223150
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||  ||||| ||||||| ||| |||| || |||||||||||||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 29508503 - 29508567
Alignment:
Q  13 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||||||||  ||| ||||| |||||||| || ||||||| ||||||||||||||||    
T  29508503 ggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 37077418 - 37077490
Alignment:
Q  9 tgtcggtgtcggacacg-acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatatt 80  Q
    ||||||||||| ||||| || | |||| ||||||||||||| ||| ||||||||| |||||||||||||||||    
T  37077418 tgtcggtgtcgtacacggacgcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcatatt 37077490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3631725 - 3631796
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 72  Q
    |||||||||| | |||||||||||||||| |||| |||||  ||||||||||  ||| ||||||||||||||    
T  3631725 attatatgtgccagtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 4466616 - 4466541
Alignment:
Q  3 tatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||| |||||||||| || | | ||||| ||||| |||||||| ||||| | ||||||||||||||||||||    
T  4466616 tatatgtgccggtgtcggatacaagatgtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcata 4466541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24633419 - 24633341
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatatt 80  Q
    ||||||||||||||||| ||||||||||| ||||| |||| || |||||||| || | | ||||| ||||||||||||||    
T  24633419 attatatgtgtcggtgttggacacgacacttgtctaacaccggtacacgcctaattcga-gagtgcccgtgcttcatatt 24633341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 15796294 - 15796224
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| |||||||||||| |||||||||  |||| || |||||||| |||||| |||||| |||||||||||    
T  15796294 gtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcata 15796224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8842370 - 8842447
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| |||||||||| |||||||||| |||  || |  | ||||||||| |||| ||||||||||||||||||||    
T  8842370 attatatatgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcata 8842447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 11252021 - 11252094
Alignment:
Q  5 tatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||| ||||| ||||||||| | ||  || |||||||| |||| ||||||||| ||||||||||    
T  11252021 tatgtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcata 11252094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 10690257 - 10690193
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||| |||| |||  ||||||||||    
T  10690257 gtgtcggacacaacacgtgtctgacacggcgacacacctaatccgaggaatgtatgtgcttcata 10690193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 14832158 - 14832202
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcct 52  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacacgcct 14832202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 11666015 - 11666070
Alignment:
Q  20 gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 75  Q
    |||||||||||||||||| |  || |||||||| || |||||||||||||||||||    
T  11666015 gacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtccgtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 26492213 - 26492146
Alignment:
Q  11 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||| ||||||||||   |||||| || |||| |||| |||||| ||||||||    
T  26492213 tcggtgtcggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcata 26492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 55213020 - 55213091
Alignment:
Q  7 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||| ||| ||||||||| ||||| | ||||||| | ||||||| ||| |||||||| ||||    
T  55213020 tgtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatccaagaagtatccgtgctacata 55213091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 4990955 - 4990913
Alignment:
Q  36 gacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||||||||| |||| ||||||||||||||||||||    
T  4990955 gacacgtggacacgcctaatccgaggagtgtccgtgcttcata 4990913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 25775557 - 25775624
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||||   |||||| |||||  |||||||||| |||| |||||||| ||||||||||    
T  25775557 gtgtcggtgtcggacacg--tcgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 40052380 - 40052430
Alignment:
Q  28 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| ||||| ||||||||||| |||| |||||||| |||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcata 40052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24205059 - 24204983
Alignment:
Q  1 attatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||| |||||| |||||||||| ||| |||||| |||||  |||||||||| || | |||||||||||||||||||    
T  24205059 attataagtgtcg-tgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 1389908 - 1389956
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| |||||  ||||| |||| |||||||||||||||||||||||||    
T  1389908 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 25074841 - 25074913
Alignment:
Q  7 tgtgtcggtgtcggacacga-cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||| ||||| | | |||||| ||||| ||||||| ||| |||| |||||||| |||||||||||    
T  25074841 tgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 25074913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 27903684 - 27903756
Alignment:
Q  7 tgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||| || ||| |||||||||||| ||  || |||| |||| || |||||||||||||||||    
T  27903684 tgtgtcggtgtcggataccgacgcgtgtctgacactggatcatgcctaatccgagaagtgtccgtgcttcata 27903756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 34910392 - 34910436
Alignment:
Q  35 tgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    |||||| |||||||| || |||| |||||||||||||||||||||    
T  34910392 tgacaccgggacacgtctaatccgaggagtgtccgtgcttcatat 34910436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 45451597 - 45451633
Alignment:
Q  4 atatgtgtcggtgtcggacacgacacgtgtctgacac 40  Q
    |||||||||||||||||||||||||| |||| |||||    
T  45451597 atatgtgtcggtgtcggacacgacacatgtccgacac 45451633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 49651777 - 49651717
Alignment:
Q  18 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||| | || ||||| ||||||| ||| |||| || |||||||||||||||||    
T  49651777 cggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcata 49651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30099056 - 30098982
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 75  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30099056 attatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 6401557 - 6401627
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6401557 gtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 21814320 - 21814390
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  21814320 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcata 21814390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 21576756 - 21576686
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  21576756 gtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcata 21576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42029793 - 42029870
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| ||||||||||||||||||| |||||| ||||  |||||||||||||| |||||||||||||| |||||    
T  42029793 attatatgtatcggtgtcggacacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcatcata 42029870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30502406 - 30502330
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||| ||| ||||||||||    
T  30502406 attatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30542749 - 30542673
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||| ||| ||||||||||    
T  30542749 attatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 39268613 - 39268541
Alignment:
Q  4 atatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    |||||||||||||| |||||||||| ||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  39268613 atatgtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 21522809 - 21522879
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||||| |||||||||||| |||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21522879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 21533375 - 21533445
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||||| |||||||||||| |||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 21542089 - 21542159
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||| ||||||||| |||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 21191067 - 21190998
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||| ||||||||| ||| | ||||||||||| |||| |||||||||||||||||||    
T  21191067 gtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43564922 - 43564999
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| ||||||||||||||||||||| ||||| ||| | ||||||||||| |||| || |||||||||||||||||    
T  43564922 attataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcata 43564999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17123089 - 17123170
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatattttc 83  Q
    ||||||| ||||||||| |||||||| || |||| |||||||| |||||||| |||| |||||||||||||||||||| ||||    
T  17123089 attatatatgtcggtgttggacacgaaacatgtccgacacggg-acacgcctaatccgaggagtgtccgtgcttcatagtttc 17123170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 39698600 - 39698670
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| || || ||||| | ||||||||| |||| ||||||||||||||||||||    
T  39698600 gtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 39698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 19453059 - 19452998
Alignment:
Q  15 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    ||||||||||||||| ||||| |||||| || ||||||||||||||||| ||||||||||||    
T  19453059 tgtcggacacgacacatgtctcacacggagatacgccttatccaaggagcgtccgtgcttca 19452998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 31084382 - 31084446
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| ||||| |||||| |||| |||| ||||||||||||| ||||||    
T  31084382 gtgtcggacacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcata 31084446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 43001859 - 43001922
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||||||||||||  ||||  |||||||||| |||| |||||||||||||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26312810 - 26312875
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 66  Q
    ||||||||| |||||||||||||||| |||||||||||||  |||||| ||| |||| ||||||||    
T  26312810 attatatgtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28588692 - 28588615
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||||||||||||||||||||| | ||||||||  |||||||| | |||| | |||||||| |||||||||    
T  28588692 attataggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcata 28588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 18592132 - 18592200
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    ||||||||||||||||| ||||||||||||||  |||||||| || || | | ||||||||||||||||    
T  18592132 gtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 30098391 - 30098455
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| |||||  |||||| ||| |||| |||| |||||||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcata 30098455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 14873577 - 14873640
Alignment:
Q  15 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||| | |||||||||  |||| ||||||||||| |||| ||||||||||||||||||||    
T  14873577 tgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 15382533 - 15382592
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 67  Q
    |||||||||| ||||||||||| |||| ||||| ||||||||||| |||| |||||||||    
T  15382533 gtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 7677764 - 7677834
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||||| ||| |||| ||||| ||||||||||| |||| ||||| ||| ||||||||||    
T  7677764 gtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcata 7677834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23012426 - 23012380
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggaca 47  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  23012426 attatatgtgtcggtgttggacacgacacatgtctgacaccgggaca 23012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 19579760 - 19579829
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||| |||||||||||||||  ||||| |||| ||||||||||| |||| |||||||| |||| |||||    
T  19579760 gtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 21194129 - 21194068
Alignment:
Q  13 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 74  Q
    ||||| ||||||||||| |||| ||||| ||| ||||||| |||| ||||||||||||||||    
T  21194129 ggtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctt 21194068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 27932288 - 27932353
Alignment:
Q  13 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||| |||||  |||||||||| || | ||||||||  ||||||||||    
T  27932288 ggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcata 27932353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 23015986 - 23015926
Alignment:
Q  17 tcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||| ||||| ||||  ||||||||||| |||| ||||||||||| |||||||    
T  23015986 tcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 16304438 - 16304367
Alignment:
Q  7 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| || |||||||||||||||| | ||||| | |||||| || |||| |||| |||||||||||||||    
T  16304438 tgtgtcagtatcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcata 16304367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 41995534 - 41995581
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||| |||||| |||||||||| |||| |||||||||||||||||||    
T  41995534 gtgtcggacacgaggacacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 3966562 - 3966632
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||||||||| ||| |||||  |||  |||||||| || |||| ||||||||||||||||||||    
T  3966562 gtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 23290049 - 23289999
Alignment:
Q  28 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||| |||||||| || ||||||| | |||||||||||||||    
T  23290049 acgtgtctgacaccgggacacgtctaatccaagcaatgtccgtgcttcata 23289999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 24238661 - 24238603
Alignment:
Q  19 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||  |||| |||||| || | |||| |||||||||||||||||||    
T  24238661 ggacacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 32426874 - 32426832
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgc 72  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||    
T  32426874 gtgtctaacacggggatacgccttatccgaggagtgtccgtgc 32426832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 32766943 - 32766873
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||| | |||||||||||| |||||  ||| ||| || |||  ||||||||||||||||||||    
T  32766943 gtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcata 32766873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 36642757 - 36642696
Alignment:
Q  13 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 75  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||   ||||||||| |||||||    
T  36642757 ggtgtcggacacgacacgtgtccgacac-gggacacgcctaattggaggagtgtcggtgcttc 36642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 42893408 - 42893478
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||| ||||||||| |||||  |||||||||| ||   |||||||||| |||||||||    
T  42893408 gtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcata 42893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 4105329 - 4105374
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 75  Q
    |||||||| || ||||||||||| |||| |||||||||||||||||    
T  4105329 gtgtctgatactgggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 19820389 - 19820329
Alignment:
Q  15 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||   |||| ||||| ||||||||||| |||  ||||||||||||||||||||    
T  19820389 tgtcggacacgac---tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcata 19820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32630753 - 32630676
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||| |||||||| |||||||||||| ||||  | ||||| ||| || | |||||||||  |||||||||    
T  32630753 attatatgtgtcagtgtcggatacgacacgtgtccgacattgagacacacctaattcgaggagtgtctatgcttcata 32630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 17088358 - 17088402
Alignment:
Q  27 cacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 71  Q
    |||||||| ||||| ||||||||||| |||| |||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 35017125 - 35017161
Alignment:
Q  42 gggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  35017125 gggacacgcctaatccgaggagtgtccgtgcttcata 35017161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 40000558 - 40000494
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| || ||||| ||| ||||||| | |||||| ||||||  ||||||||||||||||||||    
T  40000558 gtgtcgtacgcgacatgtgcctgacaccgagacacgtcttatctgaggagtgtccgtgcttcata 40000494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 18367895 - 18367965
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18367895 gtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 18367965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 16488590 - 16488520
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  16488590 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcata 16488520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 34595182 - 34595252
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||    
T  34595182 gtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcata 34595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 17327655 - 17327591
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcata 17327591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 12696383 - 12696446
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  12696383 gtgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 32978910 - 32978842
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    |||||||||||||||||||||| |||| ||||| |||||||| || |||||||||||||||||||||||    
T  32978910 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9658920 - 9658999
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctta-tccaaggagtgtccgtgcttcatat 79  Q
    ||||||| |||||||||  ||||||||||||||||||||| || |||||||| | |||||||||||||||||||||||||    
T  9658920 attatatttgtcggtgttagacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcatat 9658999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 8365519 - 8365449
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcata 8365449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 10339125 - 10339055
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||| |||  ||||||||||||||||||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 10339055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 28152146 - 28152216
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||| |||| |||||||| |||||||||||    
T  28152146 gtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcata 28152216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13789195 - 13789272
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| ||  ||||||||| ||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||    
T  13789195 attatatgtatcaatgtcggacatgacacgtgtctgacatggggatacgccttattcaaggagtgttcgtgcttcata 13789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13797814 - 13797891
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| ||  ||||||||| ||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||    
T  13797814 attatatgtatcaatgtcggacatgacacgtgtctgacatggggatacgccttattcaaggagtgttcgtgcttcata 13797891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33001307 - 33001230
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||||||||||||||||| |  | |||||| |||||| ||||||  ||||||||||    
T  33001307 attatatgtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcata 33001230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 31384984 - 31385048
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| ||||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||||    
T  31384984 gtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 4877991 - 4878060
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||| |||| ||||| || |||||||| |||| ||||||||||||||||||||    
T  4877991 gtgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcata 4878060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7996396 - 7996325
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    |||||||| ||||||||||    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  7996396 attatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8022405 - 8022476
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    |||||||| ||||||||||    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  8022405 attatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 16766756 - 16766826
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||| |||| | || |||||||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcata 16766826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 17841596 - 17841530
Alignment:
Q  12 cggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| ||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  17841596 cggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 28715343 - 28715413
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| || | || ||||| |||||||||||    
T  28715343 gtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcata 28715413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7378020 - 7378097
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||||| |  || ||||| |||||||| || |||  || |||||||||||||||||    
T  7378020 attatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcata 7378097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 30851641 - 30851676
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctg 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  30851641 attatatgtgtcggtgtcggacacgacacgtgtctg 30851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 34446618 - 34446689
Alignment:
Q  8 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||  |||| ||| ||| |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  34446618 gtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaaggagtgtccgtgcttcata 34446689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 7248417 - 7248487
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||| |||||| ||| ||||| ||||| |||||||| |  |||| ||||||||||||||||||||    
T  7248417 gtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcata 7248487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 8776967 - 8776909
Alignment:
Q  20 gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||| ||||| | ||||| ||| |||| ||||||||||||||||||||    
T  8776967 gacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcata 8776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 9107370 - 9107300
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| ||  ||||| ||||| ||||||| ||| |||| ||||||| ||||||||||||    
T  9107370 gtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcata 9107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 4388150 - 4388198
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||| ||||||||||||||| || |||||| ||||||||||    
T  4388150 gtgtctgacacgaggacacgccttatccgagaagtgtctgtgcttcata 4388198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7265611 - 7265535
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||||||||||||||| | || |||| ||||| || | | |||| |||| ||||| |||||||||||||    
T  7265611 attatatgtgtcggtgtcggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcat 7265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 78
Target Start/End: Original strand, 10649371 - 10649406
Alignment:
Q  43 ggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||| |||||||||||||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcata 10649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 8714039 - 8714109
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||| | || ||||  ||||||||||  |||| |||||||||  |||||||||    
T  8714039 gtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcata 8714109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 13364720 - 13364646
Alignment:
Q  4 atatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||| |||||||| || ||||||||||  ||||||| ||  ||| | ||||||| ||||||||||    
T  13364720 atatgtgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcata 13364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 24645529 - 24645599
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||||||||||||| |||||   |||||| || |||| | ||||||| ||||||||||    
T  24645529 gtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcata 24645599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 31959214 - 31959268
Alignment:
Q  24 cgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13360390 - 13360314
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| |||||||| ||||| |||  |||| ||||| | ||||||||| |||| | ||||||||||||||||||    
T  13360390 attatatgtttcggtgtcagacacaacaa-tgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcata 13360314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32511684 - 32511607
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||| ||||||||| ||||||  |||||||||  ||  ||||||| |||  ||||||||||||||||||||    
T  32511684 attataagtgttggtgtcggatacgacatatgtctgacatcggagcacgcctaatcggaggagtgtccgtgcttcata 32511607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 7938170 - 7938218
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  7938170 gtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcata 7938218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 8389478 - 8389411
Alignment:
Q  9 tgtcggtgtcggacacgacacg-tgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    |||||||||||||| | ||||| |||| ||||| ||||||| ||| |||| ||||||||||||||||||    
T  8389478 tgtcggtgtcggac-caacacggtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 9522949 - 9523001
Alignment:
Q  7 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 59  Q
    |||||||||||||||  ||||||||||| ||||| | ||||||||| ||||||    
T  9522949 tgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaa 9523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 9629448 - 9629512
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||| ||||| ||||| | |||||| || |||| |||||||||| |||||||||    
T  9629448 gtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcata 9629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 24138485 - 24138545
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 74  Q
    |||| ||||| |||||||||||||||| | |||| |||| |||| | ||||||||||||||    
T  24138485 gtgttggacatgacacgtgtctgacacagagacatgcctaatccgaagagtgtccgtgctt 24138545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 5414172 - 5414102
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  5414172 gtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcata 5414102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 23292997 - 23292927
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  23292997 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 30982878 - 30982807
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||| |||||| |||||||||||||||||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcatat 30982807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19097912 - 19097836
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  19097912 attatatttgtcggtgtcgaacatgacacgtgtctgacacggggacacgcctta-ccaaagagtgtctgtgcttcata 19097836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 12323968 - 12324038
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||| ||||||||| || |||||| |||| |||||||| ||||||||||||||||||||    
T  12323968 gtgtcggtgtcggacatgacacgtgtgtggcacgggaacacaccttatccgaggagtgtccgtgcttcata 12324038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 49431074 - 49431140
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 74  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||| |||||||||| |||||    
T  49431074 gtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctt 49431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 24613700 - 24613631
Alignment:
Q  9 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||| |||||||||||||||||||||  ||||||| || |||| ||||||||||||||||||||    
T  24613700 tgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcata 24613631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 46083991 - 46083921
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||    
T  46083991 gtgtcagtatcggacacgacacgtgtctgacgcggggacacgccttataagaggagtgtccatgcttcata 46083921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12895292 - 12895215
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| ||||||||||||||||||||| || || ||||  ||||||||||| |||| |||||||| |||||||||||    
T  12895292 attataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcata 12895215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 3947766 - 3947702
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| |||||  |||||| ||| |||| ||||||||||||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 848015 - 848081
Alignment:
Q  13 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    |||||||||||||| |||||||  |||| ||||||| ||| |||||||||||||||||| |||||||    
T  848015 ggtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttcatat 848081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 2361986 - 2361916
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||| |||||||||||| | ||||| ||| |||  | ||||||||||||||||||    
T  2361986 gtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcata 2361916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 19482727 - 19482797
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||| | |||||||||||||||| ||||| ||||||| ||| |||| |||||||| |||||||||||    
T  19482727 gtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 19482797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 19500858 - 19500788
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||  ||||| || | | ||||||| ||||||||||| |||||||||||||    
T  19500858 gtgtcggtgtcggacacgacacgcctctgataccgaggcacgcctaatccaaggagtatccgtgcttcata 19500788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 28964259 - 28964189
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| |||||||||||||||| | || ||||| ||||||||||| |||| |||||||||| |||||||||    
T  28964259 gtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcata 28964189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 34306815 - 34306745
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||| |||  |||| ||| |||||||||||    
T  34306815 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcata 34306745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 715603 - 715546
Alignment:
Q  21 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| |||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 752929 - 752872
Alignment:
Q  21 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| |||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 752872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 36635384 - 36635448
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||||||||| ||| ||||| ||||||||||| |||| | ||||||||||||||||||    
T  36635384 gtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcata 36635448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  25 gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 29205527 - 29205586
Alignment:
Q  19 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||| ||||| ||||||||||| |||| |||||||| |||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcata 29205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 53381602 - 53381531
Alignment:
Q  8 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| ||| ||| || ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 53381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 16073442 - 16073512
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||| || |||| |||||   ||||||||| |||| |||||||||| |||||||||    
T  16073442 gtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcata 16073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 32273524 - 32273462
Alignment:
Q  16 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||| || || ||||||||||| |  |||||||||||||| ||||||||||    
T  32273524 gtcggacacgacacgtatccgatacggggacacgacaaatccaaggagtgtcggtgcttcata 32273462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 8423728 - 8423659
Alignment:
Q  9 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||  |||| ||||| ||||||||||| |||  || ||||||||||| |||||    
T  8423728 tgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcata 8423659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 14465070 - 14465005
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    ||||| ||||||||||||||  ||||| |||||||| || |||  |||||||||||||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcatat 14465005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35158003 - 35157926
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| ||||||||||| |||||||||| ||||  |||| || |||||| | |||| || |||||||||||||||||    
T  35158003 attataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcata 35157926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 18966567 - 18966627
Alignment:
Q  18 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||| ||||||||| ||||  |||| |||||| ||| |||||||||||||||||||||    
T  18966567 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcata 18966627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 4383449 - 4383488
Alignment:
Q  43 ggacacgccttatccaaggagtgtccgtgcttcatatttt 82  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  4383449 ggacacgcctaatccgaggagtgtccgtgcttcatatttt 4383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 4672101 - 4672026
Alignment:
Q  3 tatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||| || | ||||||  ||||| || ||| | || |||||||||||||| ||||||||||    
T  4672101 tatatgtgtcggtgtcggatacaaaacgtgttcgacactggaacatgtctaatccaaggagtgtctgtgcttcata 4672026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 12797349 - 12797282
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 75  Q
    ||||||||||||||||||| || |||||||||| |||||| | || |||| |||| ||| ||||||||    
T  12797349 gtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 23861445 - 23861370
Alignment:
Q  3 tatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||| || ||||||| |||||| |||   ||||||||| || ||| |||||| |||||||||||    
T  23861445 tatatgtgtcggtgtcagatacgacacatgtctgtcaccaagacacgcctaattcaaagagtgttcgtgcttcata 23861370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 24343560 - 24343631
Alignment:
Q  8 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||| ||| |||||| ||||| |||||||||||  ||  ||||||||||||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcata 24343631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 22234890 - 22234820
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||||||||||||| |||||  ||||||  || |||| || ||||| |||||||||||    
T  22234890 gtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcata 22234820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 30838269 - 30838335
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 74  Q
    ||||| ||||||||| ||||||||||| |||||   ||||||||| | || ||||||||||||||||    
T  30838269 gtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 35161092 - 35161154
Alignment:
Q  16 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||| ||||| || |||| ||| |||| |  |||||||||||||||||    
T  35161092 gtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcata 35161154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 3064926 - 3064869
Alignment:
Q  21 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| |||| ||| | | ||||||||| |||| ||||||||||||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcata 3064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 4157197 - 4157266
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||||||||||||| |||| ||||| | || || ||| || | ||||||||| |||||||||    
T  4157197 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 4157484 - 4157553
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||||||||||||||||||||| |||| ||||| | || |||||| || | |||||||||  ||||||||    
T  4157484 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 22440608 - 22440559
Alignment:
Q  28 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||| |||||  |||||||||| |||| |||||||||||||||||||    
T  22440608 acgtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 54580041 - 54580008
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtc 34  Q
    |||||| |||||||||||||||||||||||||||    
T  54580041 attataagtgtcggtgtcggacacgacacgtgtc 54580008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 5775341 - 5775305
Alignment:
Q  42 gggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  5775341 gggacacgcctaatccgaggagtgtccgtgcttcata 5775305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36509110 - 36509074
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctga 37  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  36509110 attatatgtgtcggcgtcggacgcgacacgtgtctga 36509074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18213051 - 18212974
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  18213051 attatatgtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcata 18212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 5409836 - 5409772
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 5409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 9778559 - 9778623
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  9778559 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 32287479 - 32287404
Alignment:
Q  3 tatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| |||| ||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  32287479 tatatgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 598256 - 598326
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 24339701 - 24339771
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||| || ||||| ||||||||||| |||| ||||||| ||||||||||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcata 24339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15680850 - 15680927
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| ||||||||||||||||||||||||||| ||||| | |||||| || || | ||||||||||||||||||||    
T  15680850 attataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcata 15680927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39138485 - 39138560
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    ||||||| |||||||||||||||||| || ||||| ||||||||||||||||||||| | |||| || ||||||||    
T  39138485 attatatatgtcggtgtcggacacgatacatgtctaacacggggacacgccttatcccaagagtatctgtgcttca 39138560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 21880200 - 21880270
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||| |||| |||||  |||||||||| |||| || |||||||||||||||||    
T  21880200 gtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcata 21880270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20549832 - 20549909
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||| |||| |||| ||||  | ||||||||| |||| ||||||| ||||||||||||    
T  20549832 attatatgtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 32094020 - 32093955
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacac-ggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcata 32093955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 43027469 - 43027405
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||||||||||||| ||||| ||||||||||| |||| | ||||||||||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcata 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 25822717 - 25822784
Alignment:
Q  11 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| |||||||||||||||||||||||  |||||| |||| ||| |||||||||||||| ||||||    
T  25822717 tcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcata 25822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 21864856 - 21864926
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||||||||||||||||||| ||||| |||||||| || || | ||||||||| ||||||||||    
T  21864856 gtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcata 21864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 33994260 - 33994330
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||| |||||||||| ||||  |||| | ||||||||| ||||||||||||| |||| ||||||    
T  33994260 gtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcata 33994330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 7438766 - 7438835
Alignment:
Q  9 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||  ||||||||| |||  |||||  |||||||||| || ||||||||||||||||||||||    
T  7438766 tgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcata 7438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 29763187 - 29763130
Alignment:
Q  21 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||| ||||   |||||||||| |||| ||||||||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcata 29763130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 1433513 - 1433577
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||| |||| ||||| |||||  ||||||| || |||| ||||||||||||||||||||    
T  1433513 gtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcata 1433577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 7133285 - 7133213
Alignment:
Q  7 tgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||| ||| |||  ||||| ||||||||||||||    
T  7133285 tgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcata 7133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 8842322 - 8842282
Alignment:
Q  36 gacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  8842322 gacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 13770750 - 13770810
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 74  Q
    ||||||||||| ||||||||| ||||| || |||||||| |||| | ||||||||||||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 4794951 - 4795018
Alignment:
Q  11 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| ||||||||    ||||| || ||||||| |||||| ||||||||||    
T  4794951 tcggtgtcggacacgacacgtatctgacacctaaacacgtctaatccaagaagtgtctgtgcttcata 4795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 17852056 - 17852118
Alignment:
Q  16 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||| |||||||||| ||||| | ||||| ||| || | ||||||||||||||||||||    
T  17852056 gtcggacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcata 17852118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26733345 - 26733411
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 67  Q
    |||| |||||||||||||||||||||| | |||| || ||||| |||||||| |||| ||| |||||    
T  26733345 attaaatgtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccgaggggtgtc 26733411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 35862027 - 35862069
Alignment:
Q  36 gacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||| |||||||||| |||| ||||||||||||||||||||    
T  35862027 gacacgaggacacgcctaatccgaggagtgtccgtgcttcata 35862069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5835288 - 5835337
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 50  Q
    |||||||||||||||||| |||| |||| |||||||| || |||||||||    
T  5835288 attatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgc 5835337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 20545249 - 20545184
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    |||||| ||||||||| |||| ||||||||||||||  | || | ||||||||| |||||||||||    
T  20545249 gtgtcgtacacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcatat 20545184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22484066 - 22484143
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||| |||| ||||| |||| ||||  | |||| | || |||| || |||||||||||||||||    
T  22484066 attatatgtgtcggtgtcagacatgacacatgtccgacatcgagacatgtctgatccgagaagtgtccgtgcttcata 22484143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 26033461 - 26033392
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||| |||| |||||||||| || || | ||||| ||| |||| ||||||||||||| |||||    
T  26033461 gtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41918906 - 41918975
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgt 70  Q
    ||||||| ||||| ||||| ||||| || |||||||||||||  || ||| |||||| ||||||||||||    
T  41918906 attatatatgtcgttgtcgaacacggcaagtgtctgacacggaaacccgcattatccgaggagtgtccgt 41918975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 2334314 - 2334378
Alignment:
Q  14 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||| |||| ||||| |  ||||| || |||| ||||||||||||| ||||||    
T  2334314 gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcata 2334378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 6490786 - 6490834
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| ||||| ||||||||| | |||| ||||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcata 6490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 9933332 - 9933364
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacac 40  Q
    |||||||||||||||||||||| ||||||||||    
T  9933332 gtgtcggtgtcggacacgacacatgtctgacac 9933364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12278876 - 12278943
Alignment:
Q  1 attatatgtgtcggtgtcggacacga-cacgtgtctgacacggggacacgccttatccaaggagtgtcc 68  Q
    ||||||||||||| |||||||||| | | |||||||||||| ||||||| ||| |||| ||||||||||    
T  12278876 attatatgtgtcg-tgtcggacaccaacgcgtgtctgacaccgggacacacctaatcctaggagtgtcc 12278943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 28155624 - 28155672
Alignment:
Q  30 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| |||||  |||||||||| ||||||||| |||||||||||||||    
T  28155624 gtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcata 28155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 5993 - 5926
Alignment:
Q  11 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||    
T  5993 tcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgcctcata 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 13454 - 13523
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  13454 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

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Target: scaffold0152 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 21873 - 21804
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||||||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  21873 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

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Target: scaffold0652 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 473 - 403
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  473 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

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Target: scaffold0003 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 241653 - 241723
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 241723  T

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Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 8649 - 8719
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| |||| | |||||||||||||| ||||| |||| |||||| |||||||||||||||||||||||||    
T  8649 gtgtctgtgttgaacacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcata 8719  T

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Target: scaffold0083 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 45541 - 45471
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||||||||| | |||| |||| |||||| || ||| |||||||||||    
T  45541 gtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatccaaagattgtacgtgcttcata 45471  T

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Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 8846 - 8916
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||| |||  |||||| |||||||||||||    
T  8846 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcata 8916  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 71784 - 71854
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| ||||||||| ||||| |||||||| || |||| ||||||||| ||||||||||    
T  71784 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcata 71854  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 92875 - 92941
Alignment:
Q  13 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 79  Q
    ||||||||||||||||| |||| |||||  |||||||||| |||| |||||||||||||||||||||    
T  92875 ggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcatat 92941  T

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Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 14580 - 14645
Alignment:
Q  13 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||| ||||| | ||||||||| ||| ||||||||| |||||||||||    
T  14580 ggtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcata 14645  T

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Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 70319 - 70394
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 76  Q
    |||||| ||||||||||||||||||||||||||| |||||  ||||| |||| |||| | |||||| |||||||||    
T  70319 attataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

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Target: scaffold0512 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 5047 - 4977
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||| ||||  | |||| |||| |||| ||||||||| ||||||||||    
T  5047 gtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcata 4977  T

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Target: scaffold0475 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 3356 - 3426
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||| |||||||||| ||||||||   ||||| ||||||||||| |||| ||||||||||||||||||||    
T  3356 gtgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcata 3426  T

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Target: scaffold0450 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 8635 - 8565
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||| |||||||||| ||||||| ||||| || |||||||| || | ||||||||||||||||||||    
T  8635 gtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcata 8565  T

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Target: scaffold0793 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 4879 - 4822
Alignment:
Q  21 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||| |||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 4822  T

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Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 53239 - 53303
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 72  Q
    |||||||||||||||| |||||||||| ||||| ||||||||  | ||||||| |||||||||||    
T  53239 gtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 3849 - 3779
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||| ||||||||||||||||| |||| ||||  | ||||||||| |||| |||||||||| |||||||||    
T  3849 gtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcata 3779  T

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Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 2987 - 3057
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||| || ||||||||||||||  ||||| || |||||||| |||| ||||||||||||||| ||||    
T  2987 gtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccata 3057  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 9747 - 9678
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    |||| |||||| |||||||||| |||||||||  ||||||||  | |||| |||||||||||||||||||    
T  9747 gtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 15045 - 15089
Alignment:
Q  34 ctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||    
T  15045 ctgacacggggacacgccttatccgaggagtgtttgtgcttcata 15089  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 13472 - 13542
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||| |  ||||  |||| || ||| |||| |||||||||||| |||||||    
T  13472 gtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcata 13542  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 24083 - 24154
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtct--gacacggggacacgccttatccaaggagtgtccgtgcttcata 78  Q
    ||||||||||||||||| |||||||| |  ||||| || |||||||| |||| | ||||||||||||||||||    
T  24083 gtgtcggtgtcggacacaacacgtgtgtccgacactgg-acacgcctaatccgatgagtgtccgtgcttcata 24154  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 263372 - 263303
Alignment:
Q  8 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 77  Q
    ||||||||||| ||||||||||||||  || ||   ||||||||| |||| ||||||||||||| |||||    
T  263372 gtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1685 - 1733
Alignment:
Q  1 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 49  Q
    |||||| |||||||||||||||||||||| |||| |||||  |||||||    
T  1685 attataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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