View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17288_low_16 (Length: 533)
Name: NF17288_low_16
Description: NF17288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17288_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 413; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 1 - 512
Target Start/End: Original strand, 37813891 - 37814402
Alignment:
| Q |
1 |
tgataactgaagtagatatgctggctaatgaagatatatacctgcaatgaatacagagatgacaacaacagtcatgatagccctcagtgcatttacacca |
100 |
Q |
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||||||||||| || ||||||| ||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| || ||||||| ||||| |
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| T |
37813891 |
tgataactgaaatatatatgctagctaatgaaagtatatacctgcattgaattcagagatgacaacaacagtcatgatagcccacattgcattttcacca |
37813990 |
T |
|
| Q |
101 |
acttgatcaaagagaggactcaaaatgtaacgaagtgataccaaaacaagtgagattcctacagtgatgctatgatccatcttcttaatatcatggtcac |
200 |
Q |
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| T |
37813991 |
acttgatcaaagagaggattcaaaatgtaaagaagtgataccaaaacaagtgagattcctactttgatgctatgaaccatcttcttaatatcatggtcac |
37814090 |
T |
|
| Q |
201 |
tttttatttgcttattatttttgtcctttgggttggaagtaattggaacaaaggataagnnnnnnnnnnnnncaagatgggtatttgtttcattcttcat |
300 |
Q |
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| T |
37814091 |
tttttatttgcttattatttttgtcctttgggttggaagtaattggaacaaaggataagtttttatttttttcaagatgggtatttgtttcattcttcat |
37814190 |
T |
|
| Q |
301 |
ttgagcaatattgttgtcgttgttgttgttatcttcttcatttgcaatggatattacatgacttgattccattttgtctttattccccctctttttattt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37814191 |
ttgagcaatattgttgtcgttgttgttgttatcttcttcatttgcaatggatattacatgacttgattccattttgtctttattccccctctttttattt |
37814290 |
T |
|
| Q |
401 |
tccctttcacttggactgtgaccaagtcattctcttggggaacccctatttatactaagcaatgtgagtggagattgataaggtttaacttgggaagtat |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37814291 |
tccctttcacttggactgtgaccaagtcattctcttggggaacccctatttatactaagcaatgtgagtggagattgataaggtttaacttgggaagtat |
37814390 |
T |
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| Q |
501 |
cattaggcatgg |
512 |
Q |
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| T |
37814391 |
cattaggcatgg |
37814402 |
T |
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