View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17288_low_51 (Length: 312)
Name: NF17288_low_51
Description: NF17288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17288_low_51 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 86 - 306
Target Start/End: Original strand, 1441286 - 1441506
Alignment:
| Q |
86 |
tatttcatgttattatgtgatgagtccttgcgcttcataagcaagataaatataaattaggaaaatagggactgagttacttccacaataatcagtggca |
185 |
Q |
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| T |
1441286 |
tatttcatgttattatgtgatgagtccttgcgcttcataagcaagataaatataaattaggaaaatagggaccgagttacttccacaataatcagtggca |
1441385 |
T |
|
| Q |
186 |
cattaaaaactatcatcaaaccatcacaaaaataaaacccagatcataaaaattgatcattaggaaactctgttgctataataagaataattacttttca |
285 |
Q |
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| T |
1441386 |
cattaaaaactatcatcaaaccatcacaaaaataaaacccacatcatgaaaattgatcattaggaaactctgttgctataataagaataattacttttca |
1441485 |
T |
|
| Q |
286 |
gctttgttgacaagtttacaa |
306 |
Q |
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| T |
1441486 |
cctttgttgacaagttcacaa |
1441506 |
T |
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