View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17288_low_56 (Length: 285)
Name: NF17288_low_56
Description: NF17288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17288_low_56 |
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Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 264
Target Start/End: Original strand, 7432766 - 7433014
Alignment:
| Q |
16 |
atgaaatttgacatggtttgtgatgagatggtcccaatattgaatattgatacagttatagtgctaagagaattgggttgaaatggatgagcatgtgagt |
115 |
Q |
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| T |
7432766 |
atgaaatttgacatggtttgtgatgagatggtcccaatattgaatattgatacagttatagtgctaagagaattgggttgaaatggatgagcatgtgagt |
7432865 |
T |
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| Q |
116 |
gaaatgatggtagataagaatttagatttaatagagttatagaccaacgagattattagattagattataggtttctttttaagtggatagttggcctct |
215 |
Q |
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| T |
7432866 |
gaaatgatggtagataagaatttagatttaatagagttatagaccaacgagattattagattagattataggtttctttttaagtggatagttggcctct |
7432965 |
T |
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| Q |
216 |
cagccgataacttgtcatcatgtctcaaccaaggtagcacatatacttt |
264 |
Q |
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| T |
7432966 |
cagccgataacttgtcatcatgtctcaaccaaggtagcacatatacttt |
7433014 |
T |
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