View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17289_high_10 (Length: 253)
Name: NF17289_high_10
Description: NF17289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17289_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 38053112 - 38052873
Alignment:
| Q |
1 |
aatgatcgtctgcgaaaaaatgcatgtttgagaatcaattaaattgattggatgagggtgattatttagaaatgaaatggaacatacggttttgccggca |
100 |
Q |
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| T |
38053112 |
aatgatcgtctgcgaaaaaatgcatgtgtgagaatcgattaaattgattggatgagggtgattatttagaaatgaaatggaacatacggttttgccggca |
38053013 |
T |
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| Q |
101 |
ccgttgggaccgacgattagggttaagggtttgaagaaggtgatgacgttcttgttttccgggtcgaaacttcggatgcctttgatcagcatcttgtcga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38053012 |
ccgttgggaccgacgattagggttaagggtttgaagaaggtgatgacgttcttgttttccgggtcgaaacttcggatgcctttgatcagcatcttgtcga |
38052913 |
T |
|
| Q |
201 |
ccgtactcatttttgcttccctccttttcttcgcttcttc |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
38052912 |
ccgtactcatttttgcttccctccttttcttcgcttcttc |
38052873 |
T |
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