View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17289_low_18 (Length: 219)
Name: NF17289_low_18
Description: NF17289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17289_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 10332970 - 10333156
Alignment:
| Q |
15 |
caaagggaaagaagatagagtgttcaaactaaacaaggctctatatagcttgaaatgagaacctagggcctagaatnnnnnnnttgacaaatgctttaag |
114 |
Q |
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| T |
10332970 |
caaagggaaagaagatagagtgttcaaactaaacaaggctctatatagcttgaaatgagaacctagggcctagaataaaaaaattgacaaatgctttaag |
10333069 |
T |
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| Q |
115 |
aaagaaggatttaagaaatgcattgttgagcatggagtgtatgtaaaaggaagagaagagactagtttacttatcgtatgcttgtat |
201 |
Q |
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| T |
10333070 |
aaagaaggatttaagaaatgcattgttgagcatggagtgtatgtaaaaggaagagaagagactagtttacttatcgtatgcttgtat |
10333156 |
T |
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