View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1728_high_4 (Length: 289)
Name: NF1728_high_4
Description: NF1728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1728_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 36 - 247
Target Start/End: Complemental strand, 2065382 - 2065171
Alignment:
| Q |
36 |
gtgaacagtgtatctctctttcttaaacaaaaaacctgaacacatttacttctgtacattcaatcaaataaattccatttccccaactccatccattaac |
135 |
Q |
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| T |
2065382 |
gtgaacagtgtatctctctttcttacacaaaaaacctgaacgcatttacttctgtacattcaatcaaataaattccatttccccaactccatccattaac |
2065283 |
T |
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| Q |
136 |
cttcaattcatggacccaattcctcacatgccactcacgtgccctctccctctcctatcctattttctcaaaccaaaacaaaattacacttaaaacattt |
235 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2065282 |
attcaattcatgtacccaattcctcacatgccactcacgtgccctctccctctcctatcctattttctcaaaccaaaacaaaattacacttaaaacattt |
2065183 |
T |
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| Q |
236 |
tcatgcacaaca |
247 |
Q |
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|||||||||||| |
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| T |
2065182 |
tcatgcacaaca |
2065171 |
T |
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