View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1729-Insertion-9 (Length: 489)
Name: NF1729-Insertion-9
Description: NF1729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1729-Insertion-9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 449; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 8 - 489
Target Start/End: Original strand, 46848001 - 46848482
Alignment:
| Q |
8 |
ctactgtcacgttgccaccacaaaaacgaagtccaatttgttgatcatattttagatctcttttccttatgatgtgtctaaatggttcaatagaataaac |
107 |
Q |
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| T |
46848001 |
ctactgtcacgttgccaccacaaaaacgaagtccaatttgttgatcatattttagatctcttttccttatgatgtgtctaaatggttcaatagaataaaa |
46848100 |
T |
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| Q |
108 |
aaactcttttcttgccttctccaaatcataacaaggtagctcccacattgtttcttcataagaagaagatgaataagaaaaagagtgtttaccaactttt |
207 |
Q |
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| T |
46848101 |
aaactcttttcttgccttctccaaatcataacaaggtagctcccacattgtttcttcataagaagaagatgaataagaaaaagagtgtttaccaactttt |
46848200 |
T |
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| Q |
208 |
gtcttttcacccacaagaggcataggatcaaaccaaaatgactcttttttgaacaaatttgaatcataagtttcacaagtatcaacatcataaattaata |
307 |
Q |
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| T |
46848201 |
gtcttttcacccacaagaggcataggatcaaaccaaaatgactcttttttggacaaatttgaatcataagtttcacaagtatcaacatcataaattaata |
46848300 |
T |
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| Q |
308 |
tgttcagtggaatccatgattccaaagctttacgactactttcattcatatattcaagaacatattcttcaaaatccttagaaggtgagattttgaggct |
407 |
Q |
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| T |
46848301 |
tgttcagtggaatccatgattccaaagctttacgactactttcattcatatattcaagaacatattcttcaaaatccttagaaggtgagattttgaggct |
46848400 |
T |
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| Q |
408 |
atcccaacacatacaatccgttgtaagcttgattataattggccatgaatcattggannnnnnngatgcacccttattgcta |
489 |
Q |
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| T |
46848401 |
atcccaacacatacaatccgttgcaagcttgattataattggccatgaatcattggatttttttgatgcacccttattgcta |
46848482 |
T |
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