View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17290_low_1 (Length: 938)
Name: NF17290_low_1
Description: NF17290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17290_low_1 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-101; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 706 - 921
Target Start/End: Complemental strand, 13410622 - 13410408
Alignment:
| Q |
706 |
tcatttaaattaccttcagggtgagtttcctctcaatttcattgcattttgattttttccaaatttctattcccaaaccttaactccttttgaacacaaa |
805 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
13410622 |
tcatttaaattaccttcagggtgagtttcctctcaatttcattgcattttgattttttccaaatttctattcccaaaccttaacttcgtttgaacacaaa |
13410523 |
T |
 |
| Q |
806 |
ttttgatgtttcatatactctacttttctggcttcttataggaacaagtttcagcctttgaatgatccataagtaaacaaaacactgcaatcccttggag |
905 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13410522 |
ttttgatgtttcagatactctacttttctgg-ttcttatatgaacaagtttcagcctttgaatgatccataagtaaacaaaacactgcaattccttggag |
13410424 |
T |
 |
| Q |
906 |
gggcagaccttagtct |
921 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
13410423 |
gggcagaccttagtct |
13410408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 503 - 705
Target Start/End: Complemental strand, 13410847 - 13410646
Alignment:
| Q |
503 |
ttatgcttatagaattcacaagtattctgaagcgcagtggtaaatggtttcttggatggattataaatggcatattacttcaaaaagtaagatattctaa |
602 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13410847 |
ttatgcttatagaattcacaagtattctgaagcgcagtggtaaatggtttcttggataaattataaatggcatattacttcaaaaagtaagatattctaa |
13410748 |
T |
 |
| Q |
603 |
ctcaattcttttatctgcatattttatcactcttggtttcaaaattaacttgttttctctcgtccactttccttgaaacatccatctttaatgccaccat |
702 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
13410747 |
ctcaattcttttatctgcatattttatcactcttggttac-aaattaacttgttttctctcgtccactttccttgaaacatccatcttgaatgccaccgt |
13410649 |
T |
 |
| Q |
703 |
cta |
705 |
Q |
| |
|
||| |
|
|
| T |
13410648 |
cta |
13410646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 23680524 - 23680408
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||| || ||||||||| ||||||||| |
|
|
| T |
23680524 |
ttttttacggtgcacgctacccaatgtcacttttatcgtgattttatgaagctggaaattctaacttttacctagacgtacttttttgaactttccacca |
23680425 |
T |
 |
| Q |
139 |
gtattccaaacacatac |
155 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
23680424 |
gtattccaaacacatac |
23680408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 160; Significance: 9e-85; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 706 - 921
Target Start/End: Original strand, 3276313 - 3276526
Alignment:
| Q |
706 |
tcatttaaattaccttcagggtgagtttcctctcaatttcattgcattttgattttttccaaatttctattcccaaaccttaactccttttgaacacaaa |
805 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
3276313 |
tcatttaaattaccttcagggtgagtttcctctcaatttcattgcatttt-attgcttccaaatttttattcccaaaccataactccttttgaacacaaa |
3276411 |
T |
 |
| Q |
806 |
ttttgatgtttcatatactctacttttctggcttcttataggaacaagtttcagcctttgaatgatccataagtaaacaaaacactgcaatcccttggag |
905 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
3276412 |
ttttgatgtttcagatactctacttttctgg-ttcttacatgaacaagtttcaacctttgaatgatccataagtaaacaaaacgctgcaattccttggag |
3276510 |
T |
 |
| Q |
906 |
gggcagaccttagtct |
921 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
3276511 |
gggcagaccttagtct |
3276526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 569 - 705
Target Start/End: Original strand, 3276153 - 3276289
Alignment:
| Q |
569 |
atggcatattacttcaaaaag-taagatattctaactcaattcttttatctgcatattttatcactcttggtttcaaaattaacttgttttctctcgtcc |
667 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| |
|
|
| T |
3276153 |
atggcatattacttcaaaaaggtaagatattctaactcaattcttttatctgcatattttatcactcttggttac-aaattaacttgttttctctcttcc |
3276251 |
T |
 |
| Q |
668 |
actttccttgaaacatccatctttaatgccaccatcta |
705 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3276252 |
actttccttgaaacatccatctttaatgccacaatcta |
3276289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 23357025 - 23357142
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
23357025 |
tttttcacggtgcacgctacccaatatcacttttactatgattttatgaagctgaaaattccagcttttgcctaaaagtgcttttttgagctttccaccg |
23357124 |
T |
 |
| Q |
139 |
gtattccaaacacatact |
156 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
23357125 |
gtattccaaacacatact |
23357142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 32891543 - 32891659
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagt-gcttttttgagctttccacc |
137 |
Q |
| |
|
|||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||| | || | |||||| |||||| |||| |
|
|
| T |
32891543 |
tttttcacggtgcacgttttccaatgtc--ttttaccgtgattttatgaagctggaaattccagcttttgcctaaacgtgggtttttttagctttgcacc |
32891640 |
T |
 |
| Q |
138 |
cgtattccaaacacatact |
156 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
32891641 |
ggtattccaaacacatact |
32891659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 113; Significance: 1e-56; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 278 - 465
Target Start/End: Complemental strand, 11102029 - 11101845
Alignment:
| Q |
278 |
gaaaatggagaataaagttaaataactttcaccagtaatgaaactcgttggtgacggtgtgcacatgcacaccctttactttgaaaaataatcttataaa |
377 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
11102029 |
gaaaatggagaataaagttaaatctgtttcactagtaatgaaactcgttggtgatggtgtgcacatgcacac--tttactctgaaaaataatcttataa- |
11101933 |
T |
 |
| Q |
378 |
tcttattttatgttttatctcgaccgtctaagcaatatagttttccatccttttatcaatattatcatttatggacacacaagctatg |
465 |
Q |
| |
|
||||||||||||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
11101932 |
tcttattttatgttttatctccattgtctcagcaatatagttttccatctgtttatcaatattatcatctatagacacacaagctatg |
11101845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 440242 - 440356
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
440242 |
tttttcacggtgcacgctacccaatatcacttttactgtgattttatgaagctggaaattccagcttttgcctaaaagtgcttttttgagctttccaccg |
440341 |
T |
 |
| Q |
139 |
gtattccaaacacat |
153 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
440342 |
gtattccaaacacat |
440356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 4656065 - 4655948
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
4656065 |
tttttcacggtgcacgctacataatgtcacttttacagtgattttatgaagctgaaaattccagattttgcctaaaagtgcttttttgagctttccaccg |
4655966 |
T |
 |
| Q |
139 |
gtattccaaacacatact |
156 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4655965 |
gtattccaaacacatact |
4655948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 3504514 - 3504630
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3504514 |
ttttttacggtgcacgctacccaatgtcacttttactatgattttatgaagctgaaaatctcagcttttgcctagaagtgcttttttgagctttccaccg |
3504613 |
T |
 |
| Q |
139 |
gtattccaaacacatac |
155 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3504614 |
gtattccaaacacatac |
3504630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 12200545 - 12200475
Alignment:
| Q |
38 |
atttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttg |
108 |
Q |
| |
|
|||||| |||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12200545 |
attttttacggtgtacgttttccaatgtcacttttaccgtgactttatgaagctggaaattccagcttttg |
12200475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 11103527 - 11103473
Alignment:
| Q |
157 |
gagtggtttaactatttatcactgtgatagggcaatggttaagtttttagtctta |
211 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
11103527 |
gagtggtttagccatttatcactgtgatagggaaatggttcggtttttagtctta |
11103473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 11102064 - 11102034
Alignment:
| Q |
217 |
ttgtatgaaagtatttccttgatagtaatat |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
11102064 |
ttgtatgaaagtatttccttgatagtaatat |
11102034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 107; Significance: 4e-53; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 15796568 - 15796682
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15796568 |
tttttcacggtgcacgctacccaatatcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccg |
15796667 |
T |
 |
| Q |
139 |
gtattccaaacacat |
153 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
15796668 |
gtattccaaacacat |
15796682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 4324566 - 4324452
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4324566 |
tttttcacggtgcacgctacccaatatcacttttactgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccg |
4324467 |
T |
 |
| Q |
139 |
gtattccaaacacat |
153 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
4324466 |
gtattccaaacacat |
4324452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 100; Significance: 6e-49; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 32645503 - 32645618
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
32645503 |
tttttcacggtgcacgctatccaatgtcacttttaccgtgattttatgaagctggaaattccaacttttgcctagacgtgcttttttgagctttccaccg |
32645602 |
T |
 |
| Q |
139 |
gtattccaaacacata |
154 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
32645603 |
gtattccaaacacata |
32645618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 24607615 - 24607730
Alignment:
| Q |
43 |
tcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgc--ttttttgagctttccacccgt |
140 |
Q |
| |
|
||||||| |||||| |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||| ||||| |||| || |
|
|
| T |
24607615 |
tcacggttcacgcttcccaatgttacttttaccgtgactttatgaagctgaaaattccagcttttgcctagacgtgcgttttttttggctttgcaccggt |
24607714 |
T |
 |
| Q |
141 |
attccaaacacatact |
156 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
24607715 |
attccaaacacatact |
24607730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 51811221 - 51811273
Alignment:
| Q |
62 |
atgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctaga |
114 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||| |||||| |||||| |
|
|
| T |
51811221 |
atgtcacttttaccgtgactttatgaagctagaaattccggctttttcctaga |
51811273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 99; Significance: 2e-48; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 31104215 - 31104101
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31104215 |
tttttcacggtgcacgctacccaatatcacttttactgtgattttatgaagctggaaattccagcttttgcttagaagtgcttttttgagctttccaccg |
31104116 |
T |
 |
| Q |
139 |
gtattccaaacacat |
153 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
31104115 |
gtattccaaacacat |
31104101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 43603725 - 43603842
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgcttttttgagctttccaccc |
138 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
43603725 |
tttttcacgatgcacgctatccaatgtcacttttagcgtgattttatgaagctggaaattccagcttttgcctaaaagtgcttttttgagctttccaccg |
43603824 |
T |
 |
| Q |
139 |
gtattccaaacacatact |
156 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
43603825 |
gtatttcaaacacatact |
43603842 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 28133715 - 28133752
Alignment:
| Q |
68 |
cttttaccgtgattttatgaagctggaaattccagctt |
105 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
28133715 |
cttttaccgtgattttatgaagctggaaactctagctt |
28133752 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 5e-34; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 2025770 - 2025888
Alignment:
| Q |
39 |
tttttcacggtgcacgctacccaatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtg-cttttttgagctttccacc |
137 |
Q |
| |
|
|||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||||||| |||||||| |||| ||| |||||||||||||||||| |
|
|
| T |
2025770 |
tttttcacggtgcacgttactcaatatcacttttactgtgattttatgaagctggaaattcctgcttttgcttagacgtgttttttttgagctttccacc |
2025869 |
T |
 |
| Q |
138 |
cgtattccaaacacatact |
156 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
2025870 |
ggtattccaaacacatact |
2025888 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 471 - 529
Target Start/End: Original strand, 45531790 - 45531848
Alignment:
| Q |
471 |
gttagacatatatcttataattgtacctcatgttatgcttatagaattcacaagtattc |
529 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
45531790 |
gttagacatatatcttataattgtacctcatgtcatgcttatagaattcacaagtattc |
45531848 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 39238019 - 39238084
Alignment:
| Q |
60 |
caatgtcacttttaccgtgattttatgaagctggaaattccagcttttgcctagaagtgctttttt |
125 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||| |||| |||||||||||||||| |||| ||||| |
|
|
| T |
39238019 |
caatgtgacttttaccgtgactttatgaagctgaaaataccagcttttgcctagacgtgcattttt |
39238084 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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