View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17290_low_10 (Length: 278)
Name: NF17290_low_10
Description: NF17290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17290_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 45557250 - 45557520
Alignment:
| Q |
1 |
tctggcttcatcttcaccaattttgttgagagacttaatttcccatactttgttaacatcactaaaatccatgctagcagcagctggtatgaaaaaacta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45557250 |
tctggcttcatcttcaccaattttgttgagagacttaatttcccatactttgttaacatcactaaaatccatgctagcagcagctggtatgaaaaaacta |
45557349 |
T |
|
| Q |
101 |
ccaaatcaaaagtcaagaatcacgttgtgatgtgttagcaaatatttgcaagcttataaaataaatcatgtaatacaaaatcaatttattataaacctaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45557350 |
ccaaatcaaaagtcaagaatcacgttgtgatgtgttagcaaatatttgcaagcttataaaataaatcatgtaatacaaaatcaatttattataaacctaa |
45557449 |
T |
|
| Q |
201 |
gaatgagttatcatagtataagtttgattctattctatttctatgactacaaagcacaaacccttcttctc |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45557450 |
gaatgagttatcatagtataagtttgattctattctatttctatgactacaaagcacaaacccttcttctc |
45557520 |
T |
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