View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17290_low_3 (Length: 571)

Name: NF17290_low_3
Description: NF17290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17290_low_3
NF17290_low_3
[»] chr3 (16 HSPs)
chr3 (1-554)||(24691542-24692095)
chr3 (4-554)||(24640344-24640882)
chr3 (3-534)||(24675442-24675966)
chr3 (40-301)||(24713763-24714025)
chr3 (123-325)||(24686296-24686498)
chr3 (58-325)||(24718956-24719225)
chr3 (31-198)||(24652352-24652519)
chr3 (362-468)||(24677803-24677908)
chr3 (362-534)||(24719233-24719415)
chr3 (391-483)||(24686534-24686626)
chr3 (57-190)||(24632644-24632778)
chr3 (5-84)||(24686216-24686295)
chr3 (67-195)||(24654561-24654689)
chr3 (18-168)||(24682890-24683041)
chr3 (362-457)||(24714057-24714151)
chr3 (43-109)||(24717081-24717148)
[»] chr4 (1 HSPs)
chr4 (6-53)||(4037570-4037617)


Alignment Details
Target: chr3 (Bit Score: 554; Significance: 0; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 554; E-Value: 0
Query Start/End: Original strand, 1 - 554
Target Start/End: Original strand, 24691542 - 24692095
Alignment:
Q  1 cattaaaaagaatcatcccagcgatatgagaaaaacagattgcataatgtggcttcaggtttgccgaactctgcaaataatacaagtattaactaccata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24691542 cattaaaaagaatcatcccagcgatatgagaaaaacagattgcataatgtggcttcaggtttgccgaactctgcaaataatacaagtattaactaccata 24691641  T
Q  101 tttcgaaacagttgcaatgaattgtaagttcttcatgctccttaagtacaatgacagaccaattattaaatccataaattgtgagaaaagaaaaacataa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24691642 tttcgaaacagttgcaatgaattgtaagttcttcatgctccttaagtacaatgacagaccaattattaaatccataaattgtgagaaaagaaaaacataa 24691741  T
Q  201 ttgtaaaatatacatgaaaaatgaccagatatgtgaatgagaagcaagaaaaaggaatgatctagtactaaaattgtaggtttcagacaaatctagtctc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24691742 ttgtaaaatatacatgaaaaatgaccagatatgtgaatgagaagcaagaaaaaggaatgatctagtactaaaattgtaggtttcagacaaatctagtctc 24691841  T
Q  301 ttaaattaccgaaattaaaaaatgaaattagtcttaaggtaaatgaaaatctagtcctggtaattgaaaatcatcgacactgtaaggcctttttggatcg 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24691842 ttaaattaccgaaattaaaaaatgaaattagtcttaaggtaaatgaaaatctagtcctggtaattgaaaatcatcgacactgtaaggcctttttggatcg 24691941  T
Q  401 gtcaatctagtcatcgatatctaatatggtcgagaatttttaatttcagggatatattaaaattttgtcaattgcaggacaaatcccttgccatttcgtg 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24691942 gtcaatctagtcatcgatatctaatatggtcgagaatttttaatttcagggatatattaaaattttgtcaattgcaggacaaatcccttgccatttcgtg 24692041  T
Q  501 aaatccatattggttttacgaggtgcatggactttgatgacatattagtctaat 554  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24692042 aaatccatattggttttacgaggtgcatggactttgatgacatattagtctaat 24692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 4 - 554
Target Start/End: Original strand, 24640344 - 24640882
Alignment:
Q  4 taaaaagaatcatcccagcgatatgagaaaaacagattgcataatgtggcttcaggtttgccgaactctgcaaataatacaagtattaactaccatattt 103  Q
    ||||||||||||||||  ||||| | ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| |||    
T  24640344 taaaaagaatcatccctacgataggtgaaaaacaggttgcataatgtcgcttcaggtttgctgaactctgcaaataatacatgtattaactaccattttt 24640443  T
Q  104 cgaaacagttgcaatgaattgtaagttcttcatgctccttaagtacaatgacagaccaattattaaatccataaattgtgagaaaagaaaaacat-aatt 202  Q
    ||||||||||| ||| |||||||| ||||||| |||||||||||||| ||||| |||| ||||||||||| |||||||||| ||||||||||||| ||||    
T  24640444 cgaaacagttggaattaattgtaaattcttcacgctccttaagtacagtgacaaaccacttattaaatccctaaattgtgataaaagaaaaacatgaatt 24640543  T
Q  203 gtaaaatatacatgaaaaatgaccagatatgtgaatgagaagcaagaaaaaggaatgatctagtactaaaattgtaggtttcagacaaatctagtctctt 302  Q
    | |||||||||||||||| |||||||||| || ||||||||||| |  ||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  24640544 gcaaaatatacatgaaaactgaccagataagtcaatgagaagcaggtgaaaggaatgatttagtactaaatttgtaggtttcagacaaatctattctctt 24640643  T
Q  303 aaattaccgaaattaaaaaatgaaattagtcttaaggtaaatgaaaatctagtcctggtaattgaaaatcatcgacactgtaaggcctttttggatcggt 402  Q
    ||||||||||||||||||||||| ||||| |||||||||                     ||||||| || ||| |||||||||||| ||||||||| ||    
T  24640644 aaattaccgaaattaaaaaatgatattagccttaaggta---------------------attgaaattcctcggcactgtaaggcc-ttttggatcagt 24640721  T
Q  403 caatctagtcatcgatatctaatatggtcgagaatttttaatttcagggatatattaaaattttgtcaattgcaggaca---------aatcccttgcca 493  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||         ||||||||||||    
T  24640722 caatctaatcattaatatctaatatggttgagaatttttaatttcagggatatatcaaaattttgttaattgcaggacaaatcttcctaatcccttgcca 24640821  T
Q  494 tttcgtgaaatccatattggttttacgaggtgcatggactttgatgacatattagtctaat 554  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24640822 tttcgtgaaatccatattggttttacgaggtgcaaggactttgatgacatattagtctaat 24640882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 3 - 534
Target Start/End: Original strand, 24675442 - 24675966
Alignment:
Q  3 ttaaaaagaatcatcccagcgatatgagaaaaacagattgcataatgtggcttcaggtttgccgaactctgcaaataatacaagtattaactaccatatt 102  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||    
T  24675442 ttaaaaagaatcatcccagctatatgagaaaaacaggctgcataatgtggcttcaggtttgctgaactctgcaaataatacacgtattaactaccatttt 24675541  T
Q  103 tcgaaacagttgcaatgaattgtaagttcttcatgctccttaagtacaatgacagaccaattattaaatccataaattgtgaga----aaagaaaaacat 198  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| | |||||||||||||| ||||||||||||    ||| ||||||||    
T  24675542 tcgaaacagtttcaatgaattgtaagttcttcacgctcctcaagtacaatgacaaatcaattattaaatccctaaattgtgagacaaaaaaaaaaaacat 24675641  T
Q  199 -aattgtaaaatatacatgaaaaatgaccagatatgtgaatgagaagcaagaaaaaggaatgatctagtactaaaattgtaggtttcagacaaatctagt 297  Q
     ||||| || | |||||||||||||||||||||| |||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||||||    
T  24675642 gaattgcaagaaatacatgaaaaatgaccagataagtgaatgagaagcaggtaaaaggaatgatttagtcctaaaattgtaggtttcagacaaatctagt 24675741  T
Q  298 ctcttaaattaccgaaattaaaaaatgaaattagtcttaaggtaaatgaaaatctagtcctggtaattgaaaatcatcgacactgtaaggcctttttgga 397  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||                     ||||||||||||| ||  | |||||||||||| |||    
T  24675742 ctcttaaattaccgaaattcaaaaatgagattagccttaaggt---------------------aattgaaaatcattgatgccgtaaggcctttt-gga 24675819  T
Q  398 tcggtcaatctagtcatcgatatctaatatggtcgagaatttttaatttcagggatatattaaaattttgtcaattgcaggacaa---------atccct 488  Q
    || |||||||||||||| ||||||||||||| ||||| |||||| ||||||||||||| |  ||||||||| | |||||||||||         ||||||    
T  24675820 tctgtcaatctagtcattgatatctaatatgatcgagcattttttatttcagggatatgtcgaaattttgttagttgcaggacaaatcttccttatccct 24675919  T
Q  489 tgccatttcgtgaaatccatattgg-ttttacgaggtgcatggactt 534  Q
    ||||| || ||||||| |||||||| |||||||||||||||||||||    
T  24675920 tgccaatttgtgaaattcatattggtttttacgaggtgcatggactt 24675966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 40 - 301
Target Start/End: Original strand, 24713763 - 24714025
Alignment:
Q  40 ttgcataatgtggcttcaggtttgccgaactctgcaaataatacaagtattaactaccatatttcgaaacagttgcaatgaattgtaagttcttcatgct 139  Q
    ||||||||| | |||| | |||||| |||||||||| || |||||||||| ||||||||| |||||||||  ||||| | || ||||| |||||| ||||    
T  24713763 ttgcataatattgcttgatgtttgctgaactctgcatattatacaagtatcaactaccatttttcgaaacccttgcactaaaatgtaaattcttcctgct 24713862  T
Q  140 ccttaagtacaatgacagaccaattattaaatccataaattgtgagaaaagaaaaacat-aattgtaaaatatacatgaaaaatgaccagatatgtgaat 238  Q
    | ||||| | |||| || |||||||||||||||| |||||||||||||||||| || || ||| | |||| ||||||||||| |||||||||| ||||||    
T  24713863 cattaagaataatggcaaaccaattattaaatccctaaattgtgagaaaagaataagatgaatagcaaaaaatacatgaaaagtgaccagataagtgaat 24713962  T
Q  239 gagaagcaagaaaaaggaatgatctagtactaaaattgtaggtttcagacaaatctagtctct 301  Q
    |||||||  | ||||| |||||| |||  ||||||||| ||||||||||||||||||||||||    
T  24713963 gagaagctggtaaaagaaatgatttagccctaaaattgcaggtttcagacaaatctagtctct 24714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 123 - 325
Target Start/End: Original strand, 24686296 - 24686498
Alignment:
Q  123 tgtaagttcttcatgctccttaagtacaatgacagaccaattattaaatccataaattgtgagaaaagaaaaacata-attgtaaaatatacatgaaaaa 221  Q
    ||||| |||||||||||| | ||| ||||||||| |||||| |||||| || ||||||||||||||||||||||||  |||| ||||  |||||||||||    
T  24686296 tgtaaattcttcatgctcgtcaagaacaatgacaaaccaataattaaaaccctaaattgtgagaaaagaaaaacatgtattgcaaaaagtacatgaaaaa 24686395  T
Q  222 tgaccagatatgtgaatgagaagcaagaaaaaggaatgatctagtactaaaattgtaggtttcagacaaatctagtctcttaaattaccgaaattaaaaa 321  Q
    |||||||||| |||||||||||||| | ||||||| | || |||| ||||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  24686396 tgaccagataagtgaatgagaagcaggtaaaagga-taatttagtcctaaatttgtaggtttcagacaaatctaatctcttaaattaccgaaactaaaaa 24686494  T
Q  322 atga 325  Q
    ||||    
T  24686495 atga 24686498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 58 - 325
Target Start/End: Original strand, 24718956 - 24719225
Alignment:
Q  58 ggtttgccgaactctgcaaataatacaagtattaactaccatatttcgaaacagttgcaatgaattgtaagttcttcatgctccttaagtacaatgacag 157  Q
    ||||||| |||||||||| |||||||| |||||||||||||| ||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||     
T  24718956 ggtttgctgaactctgcatataatacatgtattaactaccattttttgaaatagttgcaatgaattgtaaattcttcatgctcctcaagtacaatgacaa 24719055  T
Q  158 accaattattaaatccataaattgtgagaaa-agaaaaacat-aattgtaaaatatacatgaaaaatgaccagatatgtg-aatgagaagcaagaaaaag 254  Q
    |||||||||||||||| |||||||| | |||  | |||| || ||||| |||| ||||| ||||||||| |||||| ||| ||||||||      |||||    
T  24719056 accaattattaaatccctaaattgtaaaaaatggtaaaatatgaattgcaaaaaatacaagaaaaatgatcagatacgtgaaatgagaaatggataaaag 24719155  T
Q  255 gaatgatctagtactaaaattgtaggtttcagacaaatctagtctcttaaattaccgaaattaaaaaatga 325  Q
     || ||| |||| ||||| || ||||| | |||| ||||||| |||||||||||||||||||  |||||||    
T  24719156 aaacgatttagtcctaaacttttaggtgtgagac-aatctagactcttaaattaccgaaattctaaaatga 24719225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 24652352 - 24652519
Alignment:
Q  31 aaaaacagattgcataatgtggcttcaggtttgccgaactctgcaaataatacaagtattaactaccatatttcgaaacagttgcaatgaattgtaagtt 130  Q
    |||||||| ||||||||| | |||| |  ||||| ||||||||||||||||||| ||||||||||| || || ||||||||||||||||||| |||  ||    
T  24652352 aaaaacaggttgcataatattgcttgatttttgctgaactctgcaaataatacatgtattaactacaattttacgaaacagttgcaatgaatcgtacatt 24652451  T
Q  131 cttcatgctccttaagtacaatgacagaccaattattaaatccataaattgtgagaaaagaaaaacat 198  Q
    ||||  |||| | ||| ||| ||| | ||||| |||| || || |||||||||||||||||| |||||    
T  24652452 cttctggctcatcaagaacagtgaaaaaccaactattcaacccctaaattgtgagaaaagaataacat 24652519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 362 - 468
Target Start/End: Original strand, 24677803 - 24677908
Alignment:
Q  362 aattgaaaatcatcgacactgtaaggcctttttggatcggtcaatctagtcatcgatatctaatatggtcgagaatttttaatttcagggatatattaaa 461  Q
    |||||||| || |||||||| ||||||||||| |||||| |||| ||||||| ||||||||||||||  |||||||||| |||||||||||||||| |||    
T  24677803 aattgaaattcctcgacactataaggcctttt-ggatcgatcaacctagtcaccgatatctaatatgaccgagaattttgaatttcagggatatatcaaa 24677901  T
Q  462 attttgt 468  Q
    |||||||    
T  24677902 attttgt 24677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 534
Target Start/End: Original strand, 24719233 - 24719415
Alignment:
Q  362 aattgaaaatcatcgacactgtaaggcctttttggatcggtcaatctagtcatcgatatctaatatggtcgagaatttttaatttcagggatatattaaa 461  Q
    |||||||| || | ||||| |||||||||||||  |||| |||| |||||||  |||||| ||||||  |||||||||| |||||||||||||||| |||    
T  24719233 aattgaaattccttgacaccgtaaggcctttttttatcgatcaagctagtcactgatatcaaatatgaccgagaattttgaatttcagggatatatcaaa 24719332  T
Q  462 attttgtcaattgcaggaca---------aatcccttgccatttcgtgaaatccatattgg-ttttacgaggtgcatggactt 534  Q
    ||||| | | ||||||||||         ||||||||||||||| ||||||||| |||||| |||| | ||||||||||||||    
T  24719333 attttcttagttgcaggacaaaacttcctaatcccttgccattttgtgaaatccgtattggttttttcaaggtgcatggactt 24719415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 391 - 483
Target Start/End: Original strand, 24686534 - 24686626
Alignment:
Q  391 ttttggatcggtcaatctagtcatcgatatctaatatggtcgagaatttttaatttcagggatatattaaaattttgtcaattgcaggacaaa 483  Q
    |||||||||| ||||||||||||  ||||||||||||| ||||||||||| |||| || ||||||||| ||||||||| | ||||||||||||    
T  24686534 ttttggatcgatcaatctagtcactgatatctaatatgatcgagaattttcaattccaaggatatattgaaattttgttagttgcaggacaaa 24686626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 24632644 - 24632778
Alignment:
Q  57 aggtttgccgaactctgcaaataatacaagtatt-aactaccatatttcgaaacagttgcaatgaattgtaagttcttcatgctccttaagtacaatga- 154  Q
    |||||||| ||||||||||||||||||| || || ||||||||| |||||||||  |||||||  | ||||| |||||||||||  | ||| ||| |||     
T  24632644 aggtttgctgaactctgcaaataatacatgtgttaaactaccatttttcgaaacccttgcaatctaatgtaaattcttcatgct-atcaagaacagtgat 24632742  T
Q  155 cagaccaattattaaatccataaattgtgagaaaag 190  Q
     | ||| |||||||||||| ||||||||||||||||    
T  24632743 aaaaccgattattaaatccctaaattgtgagaaaag 24632778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 24686216 - 24686295
Alignment:
Q  5 aaaaagaatcatcccagcgatatgagaaaaacagattgcataatgtggcttcaggtttgccgaactctgcaaataataca 84  Q
    |||||||| ||| ||||||||| ||||||||||| ||||||||| | |||| | |||||| ||| |||||||||||||||    
T  24686216 aaaaagaaccattccagcgatacgagaaaaacaggttgcataatattgcttgatgtttgctgaattctgcaaataataca 24686295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 195
Target Start/End: Original strand, 24654561 - 24654689
Alignment:
Q  67 aactctgcaaataatacaagtattaa-ctaccatatttcgaaacagttgcaatgaattgtaagttcttcatgctccttaagtacaatgacagaccaatta 165  Q
    |||||||||||||||||| | ||||| ||| ||||  || |||   ||||||||||  | || |||||||||||| | ||| ||||||||| ||||||||    
T  24654561 aactctgcaaataatacatgcattaaactatcatagctccaaatcattgcaatgaaaagaaaattcttcatgctcttcaagaacaatgacaaaccaatta 24654660  T
Q  166 ttaaatccataaattgtgagaaaagaaaaa 195  Q
    |||||||| |||||||| || |||||||||    
T  24654661 ttaaatcc-taaattgtaagcaaagaaaaa 24654689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 24682890 - 24683041
Alignment:
Q  18 ccagcgatatgagaaaaacagattgcataatgtggcttcaggtttgccgaactctgcaaataatacaagtattaa-ctaccatatttcgaaacagttgca 116  Q
    |||||||| ||||||||||||   |||||||||  ||  | ||||||  |||||||||||||||||| | ||||| ||||||||  || |||   |||||    
T  24682890 ccagcgatttgagaaaaacaggacgcataatgttactcgatgtttgcataactctgcaaataatacatgcattaaactaccatagctccaaatcattgca 24682989  T
Q  117 atgaattgtaagttcttcatgctccttaagtacaatgacagaccaattatta 168  Q
    |||||  | || |||||||||||| | ||| ||||||||| |||||||||||    
T  24682990 atgaaaagaaaattcttcatgctcatcaagaacaatgacaaaccaattatta 24683041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 457
Target Start/End: Original strand, 24714057 - 24714151
Alignment:
Q  362 aattgaaaatcatcgacactgtaaggcctttttggatcggtcaatctagtcatcgatatctaatatggtcgagaatttttaatttcagggatatat 457  Q
    |||||||||||||| ||||  ||||||||||| |||||   |||||||||||  ||||||||||||| | ||||||||| ||| ||||| ||||||    
T  24714057 aattgaaaatcatcaacaccataaggcctttt-ggatccaccaatctagtcactgatatctaatatgattgagaattttcaatatcaggtatatat 24714151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 24717081 - 24717148
Alignment:
Q  43 cataatgtggcttcaggtttgccgaactctgcaaataatacaagtat-taactaccatatttcgaaac 109  Q
    |||||| | |||| |||||||| ||||||||||||||||||| ||||  ||||||||| |||||||||    
T  24717081 cataatattgcttgaggtttgctgaactctgcaaataatacatgtatcaaactaccatttttcgaaac 24717148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 4037617 - 4037570
Alignment:
Q  6 aaaagaatcatcccagcgatatgagaaaaacagattgcataatgtggc 53  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  4037617 aaaagaatcatcccaacgatatgagaaaaacaggttgcataatgtggc 4037570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University