View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17292_high_2 (Length: 431)

Name: NF17292_high_2
Description: NF17292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17292_high_2
NF17292_high_2
[»] chr2 (41 HSPs)
chr2 (20-414)||(5700058-5700439)
chr2 (42-180)||(39284760-39284896)
chr2 (58-185)||(34139923-34140048)
chr2 (42-185)||(38312115-38312256)
chr2 (55-185)||(42362240-42362368)
chr2 (55-180)||(723901-724024)
chr2 (42-185)||(2334570-2334710)
chr2 (37-172)||(33162615-33162748)
chr2 (55-185)||(11151743-11151871)
chr2 (55-185)||(11690389-11690517)
chr2 (42-180)||(36318166-36318302)
chr2 (36-185)||(36773418-36773578)
chr2 (42-185)||(5723407-5723547)
chr2 (42-180)||(17057526-17057662)
chr2 (42-180)||(17085509-17085645)
chr2 (42-172)||(36988241-36988368)
chr2 (108-185)||(7815425-7815502)
chr2 (55-180)||(14633983-14634106)
chr2 (42-185)||(4503285-4503425)
chr2 (42-185)||(29867744-29867885)
chr2 (42-185)||(45099630-45099770)
chr2 (108-177)||(13121708-13121777)
chr2 (323-412)||(19261716-19261803)
chr2 (42-185)||(36205816-36205956)
chr2 (58-180)||(12123741-12123862)
chr2 (36-142)||(12632908-12633016)
chr2 (118-179)||(17450540-17450601)
chr2 (55-160)||(14202584-14202687)
chr2 (109-170)||(24885602-24885662)
chr2 (112-179)||(11049493-11049560)
chr2 (24-172)||(11067149-11067308)
chr2 (340-394)||(13266913-13266969)
chr2 (112-180)||(35447041-35447108)
chr2 (189-291)||(13266987-13267089)
chr2 (112-180)||(1631889-1631956)
chr2 (117-185)||(45726878-45726945)
chr2 (42-148)||(42020061-42020166)
chr2 (42-179)||(6595165-6595299)
chr2 (112-180)||(24397997-24398066)
chr2 (112-185)||(42288262-42288334)
chr2 (42-86)||(2837093-2837137)
[»] chr5 (37 HSPs)
chr5 (187-409)||(42954776-42954998)
chr5 (42-185)||(533644-533785)
chr5 (42-185)||(28750807-28750948)
chr5 (42-185)||(39468701-39468842)
chr5 (43-185)||(42426387-42426527)
chr5 (42-185)||(13488078-13488219)
chr5 (42-185)||(42428582-42428723)
chr5 (55-185)||(5887568-5887696)
chr5 (55-180)||(31182861-31182984)
chr5 (42-185)||(32636699-32636840)
chr5 (58-180)||(13239643-13239762)
chr5 (42-185)||(25412637-25412777)
chr5 (42-185)||(30683073-30683213)
chr5 (42-185)||(36074197-36074337)
chr5 (43-185)||(537901-538041)
chr5 (43-185)||(42310087-42310227)
chr5 (56-185)||(3075810-3075937)
chr5 (36-180)||(42926762-42926904)
chr5 (55-185)||(8566098-8566227)
chr5 (42-185)||(13342936-13343076)
chr5 (42-185)||(30182464-30182604)
chr5 (119-185)||(16641092-16641158)
chr5 (24-180)||(16451937-16452091)
chr5 (55-180)||(33831568-33831691)
chr5 (222-294)||(15026936-15027008)
chr5 (108-180)||(19806324-19806394)
chr5 (118-185)||(13695843-13695910)
chr5 (112-185)||(213409-213481)
chr5 (112-185)||(28278260-28278332)
chr5 (112-185)||(40147205-40147277)
chr5 (112-148)||(3325857-3325893)
chr5 (63-140)||(31300387-31300463)
chr5 (108-180)||(37439074-37439144)
chr5 (118-185)||(5057997-5058063)
chr5 (117-166)||(9049512-9049561)
chr5 (112-185)||(27637765-27637838)
chr5 (250-302)||(5232420-5232472)
[»] chr8 (54 HSPs)
chr8 (187-412)||(36315875-36316100)
chr8 (186-412)||(11364458-11364681)
chr8 (42-185)||(43036298-43036439)
chr8 (42-185)||(33352025-33352166)
chr8 (36-185)||(18141689-18141837)
chr8 (58-185)||(4731549-4731674)
chr8 (42-185)||(15212661-15212802)
chr8 (42-185)||(8153636-8153780)
chr8 (107-185)||(30291544-30291622)
chr8 (37-185)||(3303822-3303968)
chr8 (42-185)||(27811153-27811294)
chr8 (36-170)||(5689140-5689272)
chr8 (195-410)||(26998274-26998489)
chr8 (42-185)||(12702791-12702931)
chr8 (42-185)||(42498069-42498209)
chr8 (253-411)||(9617810-9617972)
chr8 (117-185)||(8965843-8965911)
chr8 (42-185)||(30143217-30143356)
chr8 (42-181)||(1746375-1746511)
chr8 (42-185)||(17982528-17982668)
chr8 (42-185)||(31218132-31218272)
chr8 (57-168)||(41365016-41365125)
chr8 (55-185)||(6598860-6598988)
chr8 (55-185)||(6674313-6674441)
chr8 (57-170)||(4162390-4162501)
chr8 (351-412)||(17011624-17011685)
chr8 (351-412)||(17545516-17545577)
chr8 (58-185)||(1292615-1292740)
chr8 (42-185)||(19945513-19945653)
chr8 (42-185)||(34254482-34254621)
chr8 (108-180)||(4743360-4743431)
chr8 (20-139)||(29796520-29796637)
chr8 (42-185)||(44303729-44303869)
chr8 (58-185)||(1345523-1345648)
chr8 (37-185)||(40320937-40321096)
chr8 (55-180)||(18106235-18106358)
chr8 (55-180)||(34256663-34256784)
chr8 (42-138)||(4733684-4733778)
chr8 (42-185)||(9765622-9765761)
chr8 (117-185)||(18655349-18655416)
chr8 (124-168)||(41366783-41366827)
chr8 (55-178)||(10929689-10929808)
chr8 (112-185)||(4283468-4283540)
chr8 (249-306)||(17011543-17011600)
chr8 (249-306)||(17545601-17545658)
chr8 (58-138)||(38863761-38863841)
chr8 (112-185)||(44353736-44353809)
chr8 (137-185)||(3772160-3772208)
chr8 (112-180)||(40221689-40221756)
chr8 (126-185)||(19491851-19491909)
chr8 (223-302)||(39721118-39721197)
chr8 (20-86)||(32902436-32902502)
chr8 (118-180)||(42435148-42435209)
chr8 (108-137)||(31513169-31513198)
[»] chr6 (28 HSPs)
chr6 (187-308)||(13436794-13436914)
chr6 (42-185)||(9183183-9183324)
chr6 (42-185)||(33211337-33211478)
chr6 (58-177)||(28137568-28137685)
chr6 (96-185)||(4045351-4045439)
chr6 (42-185)||(33160505-33160645)
chr6 (42-185)||(5406351-5406491)
chr6 (42-185)||(5410676-5410816)
chr6 (42-185)||(16452482-16452622)
chr6 (55-169)||(26954453-26954565)
chr6 (249-391)||(29181642-29181786)
chr6 (45-185)||(5413545-5413682)
chr6 (42-185)||(30834689-30834829)
chr6 (316-405)||(28983527-28983616)
chr6 (108-185)||(2171683-2171758)
chr6 (108-185)||(3039055-3039131)
chr6 (55-164)||(16567094-16567201)
chr6 (112-185)||(21593608-21593680)
chr6 (42-169)||(31404842-31404967)
chr6 (112-185)||(5043571-5043643)
chr6 (112-180)||(603237-603304)
chr6 (118-172)||(26830289-26830342)
chr6 (249-294)||(165904-165949)
chr6 (112-185)||(2973091-2973163)
chr6 (112-185)||(3808861-3808933)
chr6 (222-287)||(14003346-14003411)
chr6 (55-164)||(16568931-16569038)
chr6 (112-185)||(17762933-17763006)
[»] chr7 (59 HSPs)
chr7 (253-420)||(29346722-29346890)
chr7 (42-185)||(30024884-30025025)
chr7 (42-185)||(47674095-47674236)
chr7 (42-185)||(47676288-47676429)
chr7 (42-180)||(43864119-43864255)
chr7 (42-185)||(1113532-1113673)
chr7 (42-185)||(14069985-14070126)
chr7 (42-185)||(14380013-14380154)
chr7 (37-180)||(36574672-36574814)
chr7 (42-172)||(4253694-4253823)
chr7 (55-180)||(4538697-4538820)
chr7 (42-185)||(31733121-31733262)
chr7 (58-185)||(48491470-48491595)
chr7 (55-185)||(38671374-38671502)
chr7 (43-180)||(18126520-18126655)
chr7 (36-185)||(24526049-24526196)
chr7 (20-182)||(30843387-30843561)
chr7 (108-185)||(36146560-36146637)
chr7 (45-185)||(48489309-48489447)
chr7 (42-185)||(4586036-4586177)
chr7 (55-179)||(23343862-23343985)
chr7 (57-185)||(31105545-31105671)
chr7 (42-185)||(23554915-23555055)
chr7 (42-185)||(24514913-24515053)
chr7 (42-185)||(29990930-29991070)
chr7 (57-185)||(26417206-26417332)
chr7 (265-412)||(29367259-29367405)
chr7 (36-185)||(41317586-41317746)
chr7 (42-185)||(2761454-2761595)
chr7 (42-185)||(4178650-4178790)
chr7 (99-185)||(8153274-8153358)
chr7 (56-185)||(31518684-31518811)
chr7 (55-180)||(41649167-41649289)
chr7 (57-185)||(19502068-19502193)
chr7 (222-274)||(29292199-29292251)
chr7 (55-185)||(496135-496263)
chr7 (111-185)||(27347760-27347833)
chr7 (108-181)||(5514165-5514238)
chr7 (108-185)||(12098011-12098087)
chr7 (108-185)||(35853855-35853930)
chr7 (108-185)||(48408743-48408818)
chr7 (56-164)||(25615752-25615858)
chr7 (112-185)||(2361124-2361196)
chr7 (319-410)||(32471143-32471234)
chr7 (36-179)||(23565222-23565359)
chr7 (112-166)||(22328568-22328622)
chr7 (112-185)||(4508858-4508930)
chr7 (124-185)||(34310868-34310928)
chr7 (223-302)||(3756682-3756762)
chr7 (118-185)||(8359469-8359535)
chr7 (124-171)||(25767124-25767170)
chr7 (112-185)||(3258938-3259011)
chr7 (112-185)||(6431915-6431987)
chr7 (112-172)||(6360077-6360136)
chr7 (36-84)||(8153198-8153246)
chr7 (36-108)||(12098099-12098171)
chr7 (117-185)||(22269921-22269989)
chr7 (345-405)||(29293427-29293486)
chr7 (108-164)||(39731317-39731371)
[»] chr1 (54 HSPs)
chr1 (55-185)||(4552789-4552917)
chr1 (24-181)||(13138130-13138286)
chr1 (42-185)||(1833397-1833538)
chr1 (42-180)||(31659113-31659249)
chr1 (36-180)||(50169367-50169509)
chr1 (58-185)||(197060-197185)
chr1 (42-181)||(10925098-10925235)
chr1 (42-185)||(28223573-28223714)
chr1 (42-185)||(44455035-44455176)
chr1 (42-185)||(49918224-49918366)
chr1 (42-185)||(3156741-3156881)
chr1 (55-185)||(3847273-3847401)
chr1 (55-172)||(928142-928258)
chr1 (42-179)||(28220384-28220519)
chr1 (36-185)||(45644507-45644654)
chr1 (36-185)||(50167327-50167487)
chr1 (42-185)||(37503706-37503847)
chr1 (55-185)||(834319-834447)
chr1 (55-185)||(44650315-44650444)
chr1 (42-179)||(3189206-3189340)
chr1 (42-179)||(3198023-3198157)
chr1 (42-179)||(3206862-3206996)
chr1 (42-179)||(37560027-37560162)
chr1 (36-185)||(46064787-46064934)
chr1 (36-172)||(15820176-15820310)
chr1 (42-185)||(20762547-20762687)
chr1 (37-180)||(40122355-40122496)
chr1 (55-185)||(8550939-8551067)
chr1 (36-180)||(23555422-23555564)
chr1 (55-185)||(13659488-13659616)
chr1 (111-185)||(28265706-28265779)
chr1 (108-181)||(37282847-37282920)
chr1 (122-185)||(44646936-44646999)
chr1 (268-412)||(29274575-29274719)
chr1 (112-185)||(193555-193627)
chr1 (112-185)||(11348642-11348714)
chr1 (112-185)||(19754438-19754510)
chr1 (112-185)||(29136191-29136263)
chr1 (112-185)||(37033225-37033297)
chr1 (112-185)||(37879063-37879135)
chr1 (117-185)||(13547241-13547308)
chr1 (117-185)||(13549152-13549219)
chr1 (132-180)||(16455585-16455633)
chr1 (112-185)||(37168241-37168313)
chr1 (112-185)||(42298127-42298199)
chr1 (112-185)||(47115115-47115187)
chr1 (36-108)||(777099-777171)
chr1 (126-185)||(41360872-41360930)
chr1 (36-90)||(28265811-28265865)
chr1 (112-169)||(6808389-6808446)
chr1 (124-177)||(31925867-31925919)
chr1 (112-181)||(34603519-34603588)
chr1 (126-182)||(19752643-19752698)
chr1 (108-168)||(30476618-30476676)
[»] chr4 (59 HSPs)
chr4 (42-185)||(48142917-48143058)
chr4 (36-170)||(52467521-52467654)
chr4 (35-180)||(24968979-24969123)
chr4 (42-185)||(5429554-5429695)
chr4 (42-185)||(52082809-52082950)
chr4 (42-185)||(52095514-52095655)
chr4 (42-185)||(54200058-54200199)
chr4 (42-180)||(5207999-5208136)
chr4 (42-185)||(12739702-12739843)
chr4 (42-185)||(12747908-12748049)
chr4 (42-185)||(26175788-26175929)
chr4 (42-185)||(29254369-29254510)
chr4 (53-180)||(47038566-47038691)
chr4 (42-185)||(56178789-56178929)
chr4 (43-185)||(34570566-34570706)
chr4 (55-180)||(5871708-5871831)
chr4 (187-263)||(23407669-23407744)
chr4 (55-185)||(13009583-13009711)
chr4 (63-185)||(6542333-6542454)
chr4 (42-179)||(12745594-12745729)
chr4 (42-179)||(37740501-37740635)
chr4 (42-185)||(9927610-9927750)
chr4 (100-185)||(48893794-48893879)
chr4 (108-185)||(37229874-37229951)
chr4 (36-185)||(53345085-53345233)
chr4 (42-185)||(36994400-36994540)
chr4 (36-130)||(21704034-21704127)
chr4 (124-185)||(31474105-31474166)
chr4 (124-185)||(51337019-51337080)
chr4 (42-185)||(29999958-30000098)
chr4 (117-180)||(55085521-55085584)
chr4 (112-185)||(29056301-29056374)
chr4 (124-185)||(36463541-36463602)
chr4 (112-185)||(40632389-40632461)
chr4 (63-164)||(48142551-48142651)
chr4 (109-185)||(4587899-4587974)
chr4 (36-185)||(45687335-45687495)
chr4 (55-137)||(39593958-39594041)
chr4 (233-412)||(4578364-4578541)
chr4 (107-168)||(5349845-5349905)
chr4 (345-410)||(23406633-23406698)
chr4 (279-332)||(23407625-23407678)
chr4 (112-185)||(54882964-54883036)
chr4 (129-185)||(3913408-3913464)
chr4 (42-180)||(5370244-5370379)
chr4 (63-167)||(6677363-6677466)
chr4 (112-185)||(21688192-21688264)
chr4 (112-185)||(46703443-46703516)
chr4 (112-180)||(12119481-12119549)
chr4 (37-148)||(37755112-37755223)
chr4 (118-185)||(50673998-50674064)
chr4 (42-108)||(52093891-52093957)
chr4 (124-185)||(2209669-2209729)
chr4 (112-181)||(6655900-6655968)
chr4 (112-181)||(35662384-35662453)
chr4 (371-408)||(49272623-49272660)
chr4 (108-164)||(13992459-13992513)
chr4 (128-183)||(33089837-33089893)
chr4 (36-108)||(46147582-46147654)
[»] chr3 (57 HSPs)
chr3 (42-185)||(5236608-5236749)
chr3 (36-180)||(9666624-9666767)
chr3 (55-169)||(39153529-39153641)
chr3 (58-185)||(40734389-40734514)
chr3 (99-185)||(44700630-44700715)
chr3 (42-180)||(53921660-53921796)
chr3 (108-185)||(29196539-29196616)
chr3 (42-185)||(7762141-7762281)
chr3 (42-185)||(40735258-40735399)
chr3 (63-185)||(32890999-32891119)
chr3 (42-180)||(51398689-51398825)
chr3 (37-185)||(5373093-5373247)
chr3 (55-179)||(29810756-29810878)
chr3 (42-185)||(5260476-5260616)
chr3 (55-170)||(9581171-9581284)
chr3 (58-185)||(22835154-22835279)
chr3 (42-185)||(45095040-45095180)
chr3 (55-185)||(19684041-19684169)
chr3 (42-177)||(7764343-7764475)
chr3 (108-179)||(44331485-44331555)
chr3 (55-185)||(760735-760863)
chr3 (55-185)||(16498918-16499046)
chr3 (55-185)||(26386633-26386761)
chr3 (55-185)||(29682247-29682375)
chr3 (42-180)||(29812938-29813074)
chr3 (99-185)||(31314377-31314461)
chr3 (42-185)||(5258297-5258437)
chr3 (42-185)||(37408334-37408474)
chr3 (112-185)||(46860416-46860490)
chr3 (112-180)||(5434035-5434102)
chr3 (37-181)||(8166612-8166757)
chr3 (118-185)||(4569901-4569968)
chr3 (36-158)||(32744606-32744725)
chr3 (108-185)||(2075209-2075285)
chr3 (108-185)||(23392061-23392137)
chr3 (323-392)||(32756502-32756569)
chr3 (112-185)||(54593648-54593720)
chr3 (42-180)||(9636284-9636420)
chr3 (124-170)||(23410496-23410542)
chr3 (340-394)||(46506041-46506095)
chr3 (249-339)||(46506083-46506171)
chr3 (112-185)||(6095751-6095823)
chr3 (108-185)||(23198091-23198165)
chr3 (108-185)||(23200290-23200364)
chr3 (112-185)||(31340353-31340425)
chr3 (124-185)||(43401954-43402014)
chr3 (112-185)||(43403897-43403969)
chr3 (117-172)||(46173315-46173369)
chr3 (128-185)||(35138857-35138915)
chr3 (57-175)||(54739941-54740056)
chr3 (112-185)||(30236069-30236141)
chr3 (124-185)||(41819675-41819736)
chr3 (36-85)||(44700742-44700791)
chr3 (112-185)||(49199622-49199694)
chr3 (372-412)||(531231-531270)
chr3 (372-412)||(564186-564225)
chr3 (108-148)||(1313994-1314034)
[»] scaffold0066 (1 HSPs)
scaffold0066 (42-185)||(20567-20708)
[»] scaffold0006 (1 HSPs)
scaffold0006 (55-185)||(149249-149377)
[»] scaffold0016 (2 HSPs)
scaffold0016 (99-185)||(114535-114618)
scaffold0016 (42-108)||(114465-114531)
[»] scaffold1519 (1 HSPs)
scaffold1519 (42-185)||(792-931)
[»] scaffold0002 (1 HSPs)
scaffold0002 (42-180)||(434408-434543)
[»] scaffold0286 (1 HSPs)
scaffold0286 (124-185)||(11513-11573)
[»] scaffold0129 (1 HSPs)
scaffold0129 (83-159)||(19117-19191)
[»] scaffold0466 (1 HSPs)
scaffold0466 (117-180)||(7276-7338)
[»] scaffold0027 (1 HSPs)
scaffold0027 (258-394)||(16415-16548)
[»] scaffold0491 (1 HSPs)
scaffold0491 (108-180)||(11320-11389)
[»] scaffold0014 (1 HSPs)
scaffold0014 (117-185)||(80435-80502)


Alignment Details
Target: chr2 (Bit Score: 287; Significance: 1e-161; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 414
Target Start/End: Complemental strand, 5700439 - 5700058
Alignment:
Q  20 catgttttgaggaagacttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaa 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| ||||||||||||    
T  5700439 catgttttgaggaagacttcaggagagagaaattggggaaattaaaggaggtaactttagggttgaggatcattaatgatggttctcgttgggttgagaa 5700340  T
Q  120 acatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaagtgtaatgattcctaaaatttataatggaataaa 219  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  5700339 acatttgtaaacactttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaaatgtaataattcctaaaatttataatgaaataaa 5700240  T
Q  220 aatgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattgatgttcttcgtacatagaaacattaaggaaaag 319  Q
    ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||    
T  5700239 aataataatcgtgaattgattgtgaaatgaaaggtaaaattgatagattagaactcaattaaaattgatgttcttggtacatagaaacattaaaggaaag 5700140  T
Q  320 atagaagaagactaagtcataagactaagccattactcgactagagagtaccaaagggagagaggagagacttcaatcatttttcttcatacctt 414  Q
    |||||||||||||||||             |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5700139 atagaagaagactaagt-------------cattactctactagagagtaccaaagggagagaggagagacttcaatcatttttcttcatacctt 5700058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 39284760 - 39284896
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  39284760 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 39284857  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||| ||||||||||||| |||||||    
T  39284858 agtgaaaatcattgagtatcttgttcattggtgagattg 39284896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 34140048 - 34139923
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| |||||||||||||||| |||||| |||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| |||||||    
T  34140048 aaatcaaaggaggtaactttagggttgaaagtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgag 34139951  T
Q  158 tgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||| | ||||||||||||    
T  34139950 tgtcttgttcatttgtgagattgagaaa 34139923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 38312115 - 38312256
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||||| ||||||| |||||||||||||||| |||||||  || || || || |||||||| |||||| |||||||| ||| |||||||| |||    
T  38312115 gagagagaaatttgggaaatcaaaggaggtaactttagggttgaggttctttgattagagttctctt-gggttgggaaacatt-gtatacaccttgtgtg 38312212  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  38312213 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 38312256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 42362240 - 42362368
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  42362240 gggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 42362337  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  42362338 gagtgtcttgttcatttgtgagattgggaaa 42362368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 724024 - 723901
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||| ||| || || || ||||| ||||||||| |||||||| ||||||||||||||||| |||||| ||||    
T  724024 gggaaatcaaaggaggtaactttagggttgagggtctttgattagagttct-tttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 723927  T
Q  155 gagtgtcttgttcattggagagattg 180  Q
    |||||||||||||||| | |||||||    
T  723926 gagtgtcttgttcatttgtgagattg 723901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 2334710 - 2334570
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||  || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  2334710 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 2334614  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  2334613 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 2334570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 33162748 - 33162615
Alignment:
Q  37 ttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacctt 136  Q
    |||| |||||||||| | ||||||| ||||||||||| |||| ||||||| ||| || || ||||||||||| | |||| |||||||| |||||||||||    
T  33162748 ttcaagagagagaaacttgggaaatcaaaggaggtaattttagggttgagggtctttgattagggttctctt-gagttgggaaacatt-gtaaacacctt 33162651  T
Q  137 gggtgaatgaaaaacattgagtgtcttgttcattgg 172  Q
    |||||| |||||| ||| ||||||||||||||||||    
T  33162650 gggtgattgaaaatcatcgagtgtcttgttcattgg 33162615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 11151871 - 11151743
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  11151871 gggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 11151774  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||| ||||||||||||| || |||| ||||    
T  11151773 gagtctcttgttcattggtgaaattgggaaa 11151743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 11690389 - 11690517
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||| ||| || || |  |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  11690389 gggaaatcaaaggaggtaactttagggttgagggtctttgattatagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 11690486  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  11690487 gagtgtcttgttcatttgtgagattgggaaa 11690517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 36318302 - 36318166
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||  ||| || || || ||| |||| |||||| |||| ||| ||||||||||||||||    
T  36318302 gagagagaaacttgggaaatcaaaggaggtaactttagggttgaatgtctttgattagagttatctt-gggttgggaaatatt-gtaaacaccttgggtg 36318205  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||||||||||||||||| |||||||    
T  36318204 agtgaaaatcattgagtgtcttgttcattggtgagattg 36318166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 36773418 - 36773578
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt------------tgggttgagaaacat 123  Q
    ||||| |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |||||||||||            ||||||| |||||||    
T  36773418 cttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttgaggggttctcttgggttgggaaacat 36773517  T
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  36773518 t-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 36773578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 5723547 - 5723407
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||| ||||||| ||||  | ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  5723547 gagagagaaacttgggaaatcaaaggaggcaactttagggtttggggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 5723451  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||||||||    
T  5723450 agtgaaaatcattgagtgtcttgttcattggtgagattgagaaa 5723407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 17057662 - 17057526
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| |  |||||| || ||||||||||||| ||||||  ||| || || || |||||||| |||||| |||| ||| ||||||||||||||||    
T  17057662 gagagagaaaatttggaaatcaacggaggtaactttagggttgaaggtctttgattagagttctctt-gggttgggaaatatt-gtaaacaccttgggtg 17057565  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||||||||||||||||| |||||||    
T  17057564 agtgaaaatcattgagtgtcttgttcattggtgagattg 17057526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 17085645 - 17085509
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| |  |||||| || ||||||||||||| ||||||  ||| || || || |||||||| |||||| |||| ||| ||||||||||||||||    
T  17085645 gagagagaaaatttggaaatcaacggaggtaactttagggttgaaggtctttgattagagttctctt-gggttgggaaatatt-gtaaacaccttgggtg 17085548  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||||||||||||||||| |||||||    
T  17085547 agtgaaaatcattgagtgtcttgttcattggtgagattg 17085509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 36988368 - 36988241
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||| |||||||| |||||| | ||||||||||| ||||    
T  36988368 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctc-ttgggttgggaaaca-tagtaaacacctt-ggtg 36988272  T
Q  142 aatgaaaaacattgagtgtcttgttcattgg 172  Q
    | |||||| ||||||||||||||||||||||    
T  36988271 agtgaaaatcattgagtgtcttgttcattgg 36988241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 7815502 - 7815425
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||||| |||||||||||||||| ||||||||||||    
T  7815502 ttgggttgagaaacatttgtaaacaccttaggtgggtgaaaatcattgcgtgtcttgttcattggtgagattgagaaa 7815425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 14634106 - 14633983
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||||||||||||  |||||| ||  || || || ||||| ||||||||| |||||||| ||||||||||||||||| |||||| ||||    
T  14634106 gggaaatcaaaggaggtaactttagagttgagggtttttgattagagttct-tttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 14634009  T
Q  155 gagtgtcttgttcattggagagattg 180  Q
    |||||||||||||||| | |||||||    
T  14634008 gagtgtcttgttcatttgtgagattg 14633983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 4503425 - 4503285
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| ||  || || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  4503425 gagagagaaacttgggaaatcaaaggaagcaactttagggtttaggttctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 4503329  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||||||||||| ||||    
T  4503328 agtgaaaatcattgagtgtcttgttcattggagagattgggaaa 4503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 29867744 - 29867885
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| |  || ||| |||| |||||||| |  ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  29867744 gagagagaaactttgggaatcaaagaaggtaactattgggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 29867841  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  29867842 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 29867885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 45099630 - 45099770
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  45099630 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 45099726  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  45099727 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 45099770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 13121708 - 13121777
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagaga 177  Q
    |||||||| ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| ||||    
T  13121708 ttgggttgggaaacatttgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgaga 13121777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 412
Target Start/End: Original strand, 19261716 - 19261803
Alignment:
Q  323 gaagaagactaagtcataagactaagccattactcgactagagagtaccaaagggagagaggagagacttcaatcatttttcttcatacc 412  Q
    ||||||||||||||| ||||||| ||||||||||| |||| |||||| ||||||||||||||| ||||||  ||||||||||||||||||    
T  19261716 gaagaagactaagtc-taagacttagccattactctacta-agagtatcaaagggagagaggatagactttcatcatttttcttcatacc 19261803  T

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Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 36205956 - 36205816
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || |||||||| |||||| |||||||  ||||||||||||| ||    
T  36205956 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatg-gtaaacaccttgg-tg 36205860  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  36205859 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 36205816  T

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Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 12123862 - 12123741
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| |||| ||||||||||||||||||  ||| ||  | || |||||||| || ||| ||||||||| |||||||||||| ||| |||||| ||| |||    
T  12123862 aaatcaaagtaggtaactttaaggttgatggtctttggttagagttctcttagg-ttgggaaacatttataaacaccttggatgagtgaaaatcatcgag 12123764  T
Q  158 tgtcttgttcattggagagattg 180  Q
    ||||||||||||| |||||||||    
T  12123763 tgtcttgttcatttgagagattg 12123741  T

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Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 12633016 - 12632908
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt--tgggttgagaaacatttgtaaacac 133  Q
    ||||| |||||||||| | ||||||  ||||||| |||||||| ||||||| ||| |||||||| |||   ||  |||||||||||||||||||||||||    
T  12633016 cttcaagagagagaaacttgggaaaccaaaggagataactttagggttgagtgtctttaatgagagtttatttattgggttgagaaacatttgtaaacac 12632917  T
Q  134 cttgggtga 142  Q
    |||||||||    
T  12632916 cttgggtga 12632908  T

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Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 17450540 - 17450601
Alignment:
Q  118 aaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  17450540 aaacatttgcaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagatt 17450601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 14202687 - 14202584
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||| |||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| ||||||  |||    
T  14202687 gggaaatcaaatgaggtaactttatggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaattatt 14202590  T
Q  155 gagtgt 160  Q
    ||||||    
T  14202589 gagtgt 14202584  T

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Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 24885602 - 24885662
Alignment:
Q  109 tgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcatt 170  Q
    ||||||| |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  24885602 tgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatt 24885662  T

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Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 11049493 - 11049560
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    |||| |||||||||||||||||||||||| | |||||| ||||||||||||||||  |||| ||||||    
T  11049493 gttgggaaacatttgtaaacaccttgggtaagtgaaaatcattgagtgtcttgttttttggtgagatt 11049560  T

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Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 11067149 - 11067308
Alignment:
Q  24 ttttgaggaagacttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt------------tgg 111  Q
    ||||||||| | ||||| |||||||||| | ||||||| |||||||||||||||| ||||||  ||| || || | |||||||||            | |    
T  11067149 ttttgaggagggcttcaagagagagaaactagggaaatcaaaggaggtaactttatggttgattgtctttgattaaggttctcttgagggcttcgcttcg 11067248  T
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattgg 172  Q
    |||| |||||||| ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  11067249 gttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttattcattgg 11067308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 13266969 - 13266913
Alignment:
Q  340 aagactaagccattactcgactagag--agtaccaaagggagagaggagagacttca 394  Q
    ||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||    
T  13266969 aagactaagccgttactctactagagggagtaccaaagggagagaggagagacttca 13266913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 35447108 - 35447041
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| |||||||    
T  35447108 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg 35447041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 13267089 - 13266987
Alignment:
Q  189 taatgattcctaaaatttataatggaataaaaatgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattgat 288  Q
    |||||||||  |||||| | ||||||||||||  ||||||||  |||  ||| |  ||| ||||||  |||||||| |||||||||||||||||||||||    
T  13267089 taatgattctcaaaattgagaatggaataaaatggataattgcaaatcaattatggaatcaaaggttgaattgatatattagaactcaattaaaattgat 13266990  T
Q  289 gtt 291  Q
    |||    
T  13266989 gtt 13266987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 1631956 - 1631889
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||| |||||| |||||||||||||| | || |||||| ||| |||||||||||||||||| |||||||    
T  1631956 gttgggaaacaattgtaaacaccttgagagagtgaaaatcat-gagtgtcttgttcattggtgagattg 1631889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 45726878 - 45726945
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||| |||||||||||||||| || |||||| || |||||||||| |||||||| ||||||| ||||    
T  45726878 gaaacaattgtaaacaccttgggagagtgaaaatca-tgagtgtcttattcattggtgagattgggaaa 45726945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 42020166 - 42020061
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||||| |  |||| ||| ||||||| ||||||||| |||||  || |||| ||||||| ||| ||||| ||| ||||||||||| | ||||||    
T  42020166 gagagagaaatttgaaaaatcaaatgaggtaaatttaaggtttagagtatttgatgaaggttctc-ttgagttgataaatatttgtaaacatcgtgggtg 42020068  T
Q  142 aatgaaa 148  Q
    | |||||    
T  42020067 agtgaaa 42020061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 6595299 - 6595165
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| |  |||||| ||| |||||||||||| ||||||| ||| || || || |||||| ||||| || |||| | ||||||||| ||| || |    
T  6595299 gagagagaaacttaggaaatcaaatgaggtaactttagggttgagggtctttgattagagttctc-ttgggctgggaaa-aattgtaaaca-ctttggag 6595203  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    | ||| || ||||| |||||||||||||||| ||||||    
T  6595202 agtgagaatcattgggtgtcttgttcattggtgagatt 6595165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 24397997 - 24398066
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggt-gaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||| |||||| ||||||||||||| ||  || |||||| || ||||||||||||||||||| |||||||    
T  24397997 gttgggaaacaattgtaaacacctttggaagagtgaaaatcaatgagtgtcttgttcattggtgagattg 24398066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 42288334 - 42288262
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||  ||||||||||| |||||| ||||||| ||||    
T  42288334 gttgggaaacaattgtaaacaccttgggagagtgaaaatca-cgagtgtcttgtgcattggtgagattgggaaa 42288262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 2837137 - 2837093
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgag 86  Q
    |||||||||| | ||||||| ||||||||||| ||||||||||||    
T  2837137 gagagagaaacttgggaaatcaaaggaggtaattttaaggttgag 2837093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 5e-63; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 187 - 409
Target Start/End: Original strand, 42954776 - 42954998
Alignment:
Q  187 tgtaatgattcctaaaatttataatggaataaaaatgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattg 286  Q
    ||||||| || |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42954776 tgtaatggtttctaaaattgataatggaataaaa-tgataattgtgaattgattgtgaaatgaaaggtaaaattgatagattagaactcaattaaaattg 42954874  T
Q  287 atgttcttcgtacatagaaacattaaggaaaagatagaagaagact-aagtcataagactaagccattactcgactagagagtaccaaagggag--agag 383  Q
    |||||||  ||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||| | |||||||| ||||||||||  ||||    
T  42954875 atgttctaggtacataaaaacattaaagaaaagatagaagaagactaaagtc-taagacttagccattactctattagagagt-ccaaagggagaaagag 42954972  T
Q  384 gagagacttcaatcatttttcttcat 409  Q
    ||| |||||  |||||||||| ||||    
T  42954973 gagtgactttcatcatttttcatcat 42954998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 533644 - 533785
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||||| ||||||| |||||||||||||||| ||||| | ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  533644 gagagagaaatttgggaaatcaaaggaggtaactttagggttgggggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 533741  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| ||||| |||||||||||||||| ||||||| ||||    
T  533742 agtgaaaatcattgcgtgtcttgttcattggtgagattgggaaa 533785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 28750948 - 28750807
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| | ||||||||||||||    
T  28750948 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gaaaacaccttgggtg 28750851  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  28750850 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 28750807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 39468842 - 39468701
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| |||||||||||| |||    
T  39468842 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttcattagagttctctt-gggttgggaaacatt-gtaaacaccttgagtg 39468745  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||| | ||||||| ||||    
T  39468744 agtgaaaatcattgagtgtcttgttcattagtgagattgggaaa 39468701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 42426527 - 42426387
Alignment:
Q  43 agagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtga 142  Q
    ||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |  ||| |||||||| |||||||||||||||||    
T  42426527 agagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttaga-ttgggaaacatt-gtaaacaccttgggtga 42426430  T
Q  143 atgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
     ||||||  ||||||||||||||||||||| ||||||||||||    
T  42426429 gtgaaaattattgagtgtcttgttcattggtgagattgagaaa 42426387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 13488078 - 13488219
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| ||||||  ||||||| ||||||||||||||||    
T  13488078 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttggaaaacatt-gtaaacaccttgggtg 13488175  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | ||||||  |||||||||||||||||||||  |||||| ||||    
T  13488176 agtgaaaattattgagtgtcttgttcattggtaagattgggaaa 13488219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 42428723 - 42428582
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||| |||||||| ||||||  ||| || || || |||||||| |||||| |||| ||| ||||||||||||||||    
T  42428723 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttctctt-gggttgggaaatatt-gtaaacaccttgggtg 42428626  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  42428625 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 42428582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 5887696 - 5887568
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||| ||  || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  5887696 gggaaatcaaaggaggtaactttagggttgagggtatttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 5887599  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    || ||||||||||||| | ||||||||||||    
T  5887598 gaatgtcttgttcatttgtgagattgagaaa 5887568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 31182861 - 31182984
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||| ||||| |||||| ||||    
T  31182861 gggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttaggtgagtgaaaatcatt 31182958  T
Q  155 gagtgtcttgttcattggagagattg 180  Q
    |||||||||||||||| | |||||||    
T  31182959 gagtgtcttgttcatttgtgagattg 31182984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 32636699 - 32636840
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| |||||||||||||||| |||| || ||| || || || |||||||| |||| | |||||||| ||||||||||||||||    
T  32636699 gagagagaaacttgagaaatcaaaggaggtaactttagggttaagggtctttgattagagttctctt-gggtagtgaaacatt-gtaaacaccttgggtg 32636796  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| ||||||||||||| |||||||| ||||||| ||||    
T  32636797 agtgaaaatcattgagtgtcttattcattggtgagattgggaaa 32636840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 180
Target Start/End: Original strand, 13239643 - 13239762
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||| |||||| |||||||    
T  13239643 aaatcaaaggaggtaactttatggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgag 13239739  T
Q  158 tgtcttgttcattggagagattg 180  Q
    ||||||||||||||| |||||||    
T  13239740 tgtcttgttcattggtgagattg 13239762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 25412637 - 25412777
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||| ||| ||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  25412637 gagagagaaacttgggaaatcaaaggaggcaacattagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 25412733  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  25412734 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 25412777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 30683213 - 30683073
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| | ||||||||| |||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  30683213 gagagagaaacttgggaaatcagaggaggtaattttagggttgagggtctttgattagagttctctt-gggttgcgaaacatt-gtaaacaccttgg-tg 30683117  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||| | ||||||| ||||    
T  30683116 agtgaaaatcattgagtgtcttgttcatttgtgagattgggaaa 30683073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 36074337 - 36074197
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  36074337 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 36074241  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  36074240 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 36074197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 537901 - 538041
Alignment:
Q  43 agagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtga 142  Q
    ||||||||| | || |||| |||||||||||||||| ||||||| ||| || || || |||||||| || ||| |||||||  |||||||||||||||||    
T  537901 agagagaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-ggcttgggaaacatc-gtaaacaccttgggtga 537998  T
Q  143 atgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
     |||||| ||||| |||||||||||||| | ||||||| ||||    
T  537999 gtgaaaatcattgcgtgtcttgttcattagtgagattgggaaa 538041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 42310227 - 42310087
Alignment:
Q  43 agagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtga 142  Q
    ||||||||| | ||||||| |||||||||||||||| |||| |  ||| || || |||||||||||||| | || ||||||| |||||||  |||||| |    
T  42310227 agagagaaacttgggaaatcaaaggaggtaactttagggtttatggtctttgattagggttctctttggttgga-aaacatt-gtaaacattttgggtaa 42310130  T
Q  143 atgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
     |||||| |||||||||||||| ||||||| ||||||||||||    
T  42310129 gtgaaaatcattgagtgtcttgctcattggtgagattgagaaa 42310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 3075937 - 3075810
Alignment:
Q  56 ggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattg 155  Q
    |||||| |||||||||||||||| ||||||| ||| || || |  |||||||| |||||| |||||||| ||||||||||| | ||| |||||| |||||    
T  3075937 ggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctctt-gggttgggaaacatt-gtaaacacctttgatgagtgaaaatcattg 3075840  T
Q  156 agtgtcttgttcattggagagattgagaaa 185  Q
    ||||||| ||||||| | ||||||||||||    
T  3075839 agtgtctcgttcatttgtgagattgagaaa 3075810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 42926762 - 42926904
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||| ||| | ||||||| ||| |||||||||||| | ||||  ||| || || || |||||||| || ||| |||||||| ||||||||||    
T  42926762 cttcaagagagaaaaacttgggaaatcaaatgaggtaactttaggattgatggtctttgattagagttctctt-ggattgggaaacatt-gtaaacacct 42926859  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    ||||||| |||||| ||||||||||||||||| |||| |||||||    
T  42926860 tgggtgagtgaaaatcattgagtgtcttgttctttggtgagattg 42926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 8566227 - 8566098
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggt-tgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacat 153  Q
    ||||||| ||| |||||||||||| ||  |||| ||| || || || |||||||| |||||  |||||||| ||||||||||||||||| |||||| |||    
T  8566227 gggaaatcaaatgaggtaactttagggcatgagggtctttgattagagttctctt-gggttcggaaacatt-gtaaacaccttgggtgagtgaaaatcat 8566130  T
Q  154 tgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||||| | ||||||||||||    
T  8566129 tgagtgtcttgttcatttgtgagattgagaaa 8566098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 13342936 - 13343076
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || |||  | || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  13342936 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctctgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 13343032  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  13343033 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 13343076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 30182464 - 30182604
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| || | || ||| || || || |||||||| |||||| |||||||| | ||||||||||| ||    
T  30182464 gagagagaaacttgggaaatcaaaggaagcaactttagggattagggtctttgattagagttctctt-gggttgggaaacatt-gcaaacaccttgg-tg 30182560  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  30182561 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 30182604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 16641158 - 16641092
Alignment:
Q  119 aacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||    
T  16641158 aacatttgtaaacaccttgagtgagtgaaattcattaagtgtcttgttcattggcgagattgagaaa 16641092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 16451937 - 16452091
Alignment:
Q  24 ttttgaggaaga-cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaaca 122  Q
    |||||||||||| ||||| |||||  ||| | ||||||| |||||||||||||||| |||||||  || || || || |||||| |||||||  ||||||    
T  16451937 ttttgaggaagagcttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggatctttgattagagttctc-ttgggttcggaaaca 16452035  T
Q  123 tttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
     ||||||||||||| ||| | ||| || |||||||||||||||||||||  |||||||    
T  16452036 -ttgtaaacacctt-ggtaagtgacaatcattgagtgtcttgttcattgatgagattg 16452091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 33831568 - 33831691
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| ||| |||| |||| || ||| || || || |||||||| ||||||  ||||||| ||||||||||||||||| |||||| ||||    
T  33831568 gggaaatcaaaggagttaattttagggttaagggtctttgattagagttctctt-gggttggaaaacatt-gtaaacaccttgggtgagtgaaaatcatt 33831665  T
Q  155 gagtgtcttgttcattggagagattg 180  Q
    ||||||||| |||||| | |||||||    
T  33831666 gagtgtcttattcatttgtgagattg 33831691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 15026936 - 15027008
Alignment:
Q  222 tgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattgatgttctt 294  Q
    |||||||| | |||| ||| || ||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  15026936 tgataattttaaattaattattgaatgaagagtaaaattgatagattagaactcaattaaaattaatgttctt 15027008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 19806324 - 19806394
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||||||| |||||||| ||||||||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  19806324 ttgggttgggaaacatt-gtaaacaccttgggtgagtgaaat-cattgagtgtcttgttcattggtgagattg 19806394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 13695910 - 13695843
Alignment:
Q  118 aaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||||||| |||| |||||| |||||||| |||| ||| |||||||||||| ||||    
T  13695910 aaacatttgtaaacaccttgtgtgagtgaaaatcattgagtatctttttctttggagagattgggaaa 13695843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 213409 - 213481
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  213409 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 213481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 28278260 - 28278332
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||| ||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  28278260 gttgggaaacaattgtaaacacattgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 28278332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 40147205 - 40147277
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || || ||| ||| |||||||||||||||||| ||||||| ||||    
T  40147205 gttgggaaacaattgtaaacaccttgggagagtggaaatcat-gagtgtcttgttcattggtgagattgggaaa 40147277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 3325857 - 3325893
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaa 148  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3325857 gttgagaaacatttgtaaacaccttgggtgagtgaaa 3325893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 31300387 - 31300463
Alignment:
Q  63 aaaggaggtaactttaaggttgagagtcat--taatgagggttctctttgggttgagaaacatttgtaaacaccttgggt 140  Q
    |||||||||||||||||||||||| ||| |  || ||| ||||||| ||||||||||||||| |||||||||||||||||    
T  31300387 aaaggaggtaactttaaggttgagtgtctttgtagtga-ggttctc-ttgggttgagaaaca-ttgtaaacaccttgggt 31300463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 37439074 - 37439144
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||||||| |||||||| |||||||| |||| ||| |||||| ||||||||||||| |||||||| |||||||    
T  37439074 ttgggttgggaaacatt-gtaaacactttgg-tgagtgaaaatcattgagtgtcttattcattggtgagattg 37439144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 5057997 - 5058063
Alignment:
Q  118 aaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||| |||||||||||||||  || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  5057997 aaacaattgtaaacaccttggaagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 5058063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 9049561 - 9049512
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgtt 166  Q
    ||||||||||||||||| |||||||| | |||| || |||||||||||||    
T  9049561 gaaacatttgtaaacactttgggtgagtaaaaatcactgagtgtcttgtt 9049512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 27637838 - 27637765
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||| ||||||||||  || ||||||    ||||||||||||||||||| ||||||||||||    
T  27637838 gttgggaaacaattgtgaacaccttggaagagtgaaaattcatgagtgtcttgttcattggtgagattgagaaa 27637765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 5232472 - 5232420
Alignment:
Q  250 aaggtaaaattgatagattagaactcaattaaaattgatgttcttcgtacata 302  Q
    |||||||||||||||||| |||||||||||| | ||| |||| || |||||||    
T  5232472 aaggtaaaattgatagataagaactcaattatagttggtgtttttagtacata 5232420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 4e-48; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 187 - 412
Target Start/End: Original strand, 36315875 - 36316100
Alignment:
Q  187 tgtaatgattcctaaaatttataatggaataaaaatgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattg 286  Q
    |||||||||||  |||||| | |||| ||||||| |||||| ||| | | |||| || | | |||||||||||| |||| | |||||||||||||||||     
T  36315875 tgtaatgattctcaaaattgagaatgaaataaaattgataaatgtaattggattatttatttaaaggtaaaattaatagttgagaactcaattaaaattt 36315974  T
Q  287 atgttcttcgtacatagaaacattaaggaaaagatagaagaagactaagtcataagactaagccattactcgactagagagtaccaaagggagagaggag 386  Q
    |||||||| ||||||| ||||||||| ||||| ||||||||||| |||||| |||||||||  |||||||| ||||||||||| ||||||||||||||||    
T  36315975 atgttcttggtacatataaacattaaagaaaacatagaagaagattaagtcctaagactaaatcattactctactagagagtatcaaagggagagaggag 36316074  T
Q  387 agacttcaatcatttttcttcatacc 412  Q
    ||| ||  ||||||||||||| ||||    
T  36316075 agattttcatcatttttcttcctacc 36316100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 186 - 412
Target Start/End: Original strand, 11364458 - 11364681
Alignment:
Q  186 gtgtaatgattcctaaaatttataatggaataaaaatgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaatt 285  Q
    |||||||| ||||||||||| | ||||  |||||  |||||||||| ||||| || |||||| ||||||||||||||  ||||||||| |||||||||||    
T  11364458 gtgtaatggttcctaaaattgagaatgtgataaat-tgataattgtaaattgtttattaaatcaaaggtaaaattgagggattagaacccaattaaaatt 11364556  T
Q  286 gatgttcttcgtacatagaaacattaaggaaaagatagaagaagactaagtcataagac-taagccattactcgactagagagtaccaaagggagagagg 384  Q
    | ||||||| ||||||| |||    ||||||||||||||||||||| |||||  ||||| ||||||||||||| ||| ||||||||||||||| ||||||    
T  11364557 ggtgttcttagtacata-aaagggaaaggaaaagatagaagaagaccaagtcgaaagacttaagccattactctacttgagagtaccaaaggg-gagagg 11364654  T
Q  385 agagacttcaatcatttttcttcatacc 412  Q
    ||| || |   |||||||||||||||||    
T  11364655 agatac-tatgtcatttttcttcatacc 11364681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 43036298 - 43036439
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  43036298 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 43036395  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  43036396 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 43036439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 33352025 - 33352166
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||| ||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  33352025 gagagagaaacttgggaaatcaaagaaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 33352122  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  33352123 attgaaaatcattgagtgtcttgttcattggtgagattgggaaa 33352166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 18141689 - 18141837
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||||||| | || ||||  |||||||||| |||| ||||||| ||| || || ||||||||||| || ||| |||||||||||||||||||    
T  18141689 cttcaagagagagaaactaggaaaatcgaaggaggtaattttagggttgagggtctttgattagggttctcttagg-ttgggaaacatttgtaaacacct 18141787  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| || |||||| |||||||||||||||||||||| ||||||| ||||    
T  18141788 tgggcgagtgaaaatcattgagtgtcttgttcattggtgagattgtgaaa 18141837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 4731549 - 4731674
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| |||||||    
T  4731549 aaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgag 4731646  T
Q  158 tgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||| ||||||| ||||    
T  4731647 tgtcttgttcattggtgagattgggaaa 4731674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 15212661 - 15212802
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||| |||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  15212661 gagagagaaacttgggaaatcaaatgaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 15212758  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||| ||||||||||||||| ||||||| ||||    
T  15212759 agtgaaaatcattgaatgtcttgttcattggtgagattgggaaa 15212802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 8153636 - 8153780
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    ||||||||||||  |||||| ||||||||||| |||||||||||||||| || || |  ||||| ||||||||| |||||||||||| ||||||||| ||    
T  8153636 gagagagaaatttaggaaatcaaaggaggtaattttaaggttgagagtctttgattaatgttct-tttgggttgggaaacatttgtatacaccttggatg 8153734  T
Q  142 aatgaaaaacattga--gtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| ||||||  ||||| |||||||||| ||||||||||||    
T  8153735 agtgaaaatcattgagtgtgtcatgttcattggtgagattgagaaa 8153780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 30291544 - 30291622
Alignment:
Q  107 tttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  30291544 tttgggttgggaaacatttgtaaacaccttgggtgattgaaaatcattgagtgtcttgttcattggtgagattgagaaa 30291622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 37 - 185
Target Start/End: Complemental strand, 3303968 - 3303822
Alignment:
Q  37 ttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacctt 136  Q
    |||| |||||| ||| | ||||||| |||||||||||||||| ||||||| ||| || || ||||||||||| |||||| |||||||| |||||||||||    
T  3303968 ttcaagagagaaaaacttgggaaatcaaaggaggtaactttacggttgagggtctttgattagggttctctt-gggttgggaaacatt-gtaaacacctt 3303871  T
Q  137 gggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||| |||||| |||||||| ||||||| ||||| ||||||| ||||    
T  3303870 gagtgagtgaaaatcattgagtatcttgtttattggtgagattgggaaa 3303822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 27811153 - 27811294
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||||||| |||| ||||||| ||| || || || |||||||| || | || ||||||| ||||||||||||||||    
T  27811153 gagagagaaaattgggaaatcaaaggaggtaaatttagggttgagggtctttgattagagttctcttaggttgga-aaacatt-gtaaacaccttgggtg 27811250  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  27811251 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 27811294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 5689140 - 5689272
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||||||| | ||||||| ||||||| |||||||| ||||||| ||| || || |||||||||||  | ||| |||||||| ||||||||||    
T  5689140 cttcaagagagagaaactagggaaatcaaaggagataactttagggttgagggtctttgattagggttctcttgagtttg-gaaacatt-gtaaacacct 5689237  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcatt 170  Q
    ||||||| |||||| ||||||||||||||||||||    
T  5689238 tgggtgagtgaaaatcattgagtgtcttgttcatt 5689272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 410
Target Start/End: Complemental strand, 26998489 - 26998274
Alignment:
Q  195 ttcctaaaatttataatggaataaaaatgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattgatgttctt 294  Q
    ||||||||||| | |||| |||||||  ||||||||| |||||||| |||| | |||| ||||||||||||||  ||||||||| | | ||| |||||||    
T  26998489 ttcctaaaattgagaatgaaataaaatggataattgt-aattgattattaacttaaagataaaattgatagatc-gaactcaataatatttggtgttctt 26998392  T
Q  295 cgtacatagaa-acattaa-ggaaaagatagaagaagactaagtcataagactaagccattactcgactagagagtaccaaagggagagaggagagactt 392  Q
      ||||||||| | |  || |||||| | |||||||||||||||| ||| ||||||||||||||  |||||||||||| |||| |||||| ||||||||     
T  26998391 attacatagaagagagaaaaggaaaatacagaagaagactaagtcttaaaactaagccattactttactagagagtactaaagagagagaagagagactc 26998292  T
Q  393 caatcatttttcttcata 410  Q
      |||||||| |||||||    
T  26998291 tcatcattttacttcata 26998274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 12702931 - 12702791
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||||||| |||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  12702931 gagagagaaacttgggaaatcaaaggaggtaaatttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 12702835  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||| ||||||||||||||||| ||||||| ||||    
T  12702834 agtgaaaatcattaagtgtcttgttcattggtgagattgggaaa 12702791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 42498069 - 42498209
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |  |||||||| |||||| ||||| || ||||||||||||| ||    
T  42498069 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctctt-gggttgggaaacgtt-gtaaacaccttgg-tg 42498165  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  42498166 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 42498209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 411
Target Start/End: Original strand, 9617810 - 9617972
Alignment:
Q  253 gtaaaattgatagattagaactcaattaaaattgatgttcttcgtacatagaaacattaaggaaaagatagaagaagactaagt-cataagactaagcca 351  Q
    ||||||||||||| | |||||  |||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||| | || ||   |||| ||    
T  9617810 gtaaaattgatagttgagaaccgaattaaaattgatgtttttggtacatagaaatattaaagaaaagatagaagaagactaaatacaaaaacttaagtca 9617909  T
Q  352 ttactc----gactagagagtaccaaagggagagaggagagacttcaatcatttttcttcatac 411  Q
    ||||||     |||||||||||||| ||| |||||||| |||||||  ||||||||||||||||    
T  9617910 ttactccctatactagagagtaccacaggaagagaggaaagacttc-ttcatttttcttcatac 9617972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 8965911 - 8965843
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  8965911 gaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 8965843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 30143217 - 30143356
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||| |||||||| |||||| |||||||||| |||||||    
T  30143217 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctc-ttgggttgggaaaca-ttgtaaacacattgggtg 30143314  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| ||||  ||||||||||||||||  |||||| ||||    
T  30143315 agtgaaaatcatt--gtgtcttgttcattggccagattgggaaa 30143356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 1746511 - 1746375
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || ||||||||||| ||| |||||||| ||||||||||||| ||    
T  1746511 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtccttgattagagttctctttgg-ttgggaaacatt-gtaaacaccttgg-tg 1746415  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattga 181  Q
    | |||||| |||||||||||||||||||||| ||||||||    
T  1746414 agtgaaaatcattgagtgtcttgttcattggtgagattga 1746375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 17982528 - 17982668
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  17982528 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 17982624  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  17982625 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 17982668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 31218132 - 31218272
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  31218132 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 31218228  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  31218229 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 31218272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 168
Target Start/End: Complemental strand, 41365125 - 41365016
Alignment:
Q  57 gaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattga 156  Q
    ||||| ||| |||||||||||| ||||||| ||| || || || ||||| ||||||||| |||||||| ||||||||||||||||| |||||| ||||||    
T  41365125 gaaatcaaatgaggtaactttagggttgagggtctttgattagagttct-tttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattga 41365028  T
Q  157 gtgtcttgttca 168  Q
    ||||||||||||    
T  41365027 gtgtcttgttca 41365016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 6598860 - 6598988
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| |||||||| ||||||| ||| || || || |||||||| |||||| |||||||| |||||||||||| |||| |||||| ||||    
T  6598860 gggaaatcaaaggagataactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgagtgagtgaaaatcatt 6598957  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
     ||||||||||||||| | ||||||| ||||    
T  6598958 aagtgtcttgttcatttgtgagattgggaaa 6598988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 6674313 - 6674441
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| |||||||| ||||||| ||| || || || |||||||| |||||| |||||||| |||||||||||| |||| |||||| ||||    
T  6674313 gggaaatcaaaggagataactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgagtgagtgaaaatcatt 6674410  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
     ||||||||||||||| | ||||||| ||||    
T  6674411 aagtgtcttgttcatttgtgagattgggaaa 6674441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 4162390 - 4162501
Alignment:
Q  57 gaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattga 156  Q
    ||||||||| |||||||||||| ||||||| ||| || || ||||||||||| ||||||  ||||||| |||||||||||| | || |||||| ||||||    
T  4162390 gaaattaaaagaggtaactttagggttgagggtctttgattagggttctctt-gggttggaaaacatt-gtaaacaccttgagcgagtgaaaatcattga 4162487  T
Q  157 gtgtcttgttcatt 170  Q
    ||||||||||||||    
T  4162488 gtgtcttgttcatt 4162501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 17011624 - 17011685
Alignment:
Q  351 attactcgactagagagtaccaaagggagagaggagagacttcaatcatttttcttcatacc 412  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  17011624 attactctactagagagtaccaaagggagagaggagagacttgcatcatttttcttcatacc 17011685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 412
Target Start/End: Complemental strand, 17545577 - 17545516
Alignment:
Q  351 attactcgactagagagtaccaaagggagagaggagagacttcaatcatttttcttcatacc 412  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  17545577 attactctactagagagtaccaaagggagagaggagagacttgcatcatttttcttcatacc 17545516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 1292740 - 1292615
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| ||| |||||||||||| ||||||| ||| || || || ||||| ||||||||| |||||| | || |||||||||||||| ||||||  ||||||    
T  1292740 aaatcaaatgaggtaactttagggttgagggtctttgattagagttct-tttgggttgggaaacact-gtgaacaccttgggtgagtgaaaattattgag 1292643  T
Q  158 tgtcttgttcattggagagattgagaaa 185  Q
    |||||||||| |||| ||||||||||||    
T  1292642 tgtcttgttctttggtgagattgagaaa 1292615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 19945653 - 19945513
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||| ||| | ||||||| |||||| | ||||||| |||| |||||| || || || |||||||| |||| | |||||||| ||||||||||||| ||    
T  19945653 gagagacaaacttgggaaatcaaaggaagcaactttagggtttagagtctttgattagagttctctt-gggtcgggaaacatt-gtaaacaccttgg-tg 19945557  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  19945556 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 19945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 34254621 - 34254482
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||| ||||||| |||| || ||| || || || |||||||| |||||| || ||||| ||||||||||||| ||    
T  34254621 gagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctctt-gggttg-gagacatt-gtaaacaccttgg-tg 34254526  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  34254525 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 34254482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 4743431 - 4743360
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||||||| |||||||| |||||||||||||||||  ||||| |||||||||||||||||||||| |||||||    
T  4743431 ttgggttgggaaacatt-gtaaacaccttgggtgagcgaaaatcattgagtgtcttgttcattggtgagattg 4743360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 29796637 - 29796520
Alignment:
Q  20 catgttttgaggaagacttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaa 119  Q
    ||||||||||||| ||||||| |||||||||| | | ||||| |||||||||||||||| |||||||  || ||   |||||||||| |||||||| |||    
T  29796637 catgttttgagga-gacttcaagagagagaaacttgagaaatcaaaggaggtaactttagggttgaggatctttggcgagggttctc-ttgggttgggaa 29796540  T
Q  120 acatttgtaaacaccttggg 139  Q
    ||||||||||| | ||||||    
T  29796539 acatttgtaaatatcttggg 29796520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 44303729 - 44303869
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| ||||||   ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  44303729 gagagagaaacttgagaaatcaaaggaaacaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 44303825  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  44303826 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 44303869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 1345648 - 1345523
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| |||||| ||||||||| ||||||| ||  || || || |||||||| | |||| |||| ||| ||||||||||||||||| |||||| ||||||     
T  1345648 aaatcaaaggatgtaactttagggttgagggtttttgattagagttctctt-gagttgggaaatatt-gtaaacaccttgggtgagtgaaaatcattgaa 1345551  T
Q  158 tgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||| | ||||||| ||||    
T  1345550 tgtcttgttcatttgtgagattgggaaa 1345523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 40320937 - 40321096
Alignment:
Q  37 ttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt------------tgggttgagaaacatt 124  Q
    |||| |||||||||| | ||||||| |||||||||||||||  ||||||| ||| || || |||||||||||            || |||| ||||||||    
T  40320937 ttcaagagagagaaactagggaaatcaaaggaggtaactttcgggttgagggtctttgattagggttctcttgaggggttctcttgagttgggaaacatt 40321036  T
Q  125 tgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
     |||||||||||| |||| |||||| ||||||||||||||||||| || ||||||| ||||    
T  40321037 -gtaaacaccttgagtgactgaaaatcattgagtgtcttgttcataggtgagattgggaaa 40321096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 18106358 - 18106235
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||  ||||||| | | ||| ||| ||||| ||  ||||||| |||||| |||||||| ||||||||||||||||| ||||||   ||    
T  18106358 gggaaatcaaaggagagaactttaggatagagggtctttaattagatttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaattgtt 18106261  T
Q  155 gagtgtcttgttcattggagagattg 180  Q
    ||||||||||||||| || |||||||    
T  18106260 gagtgtcttgttcatcggtgagattg 18106235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 34256784 - 34256663
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||| ||||||| |||| || ||| || || || ||| |||| |||||| |||||||| ||||||||||||| ||  |||||| ||||    
T  34256784 gggaaatcaaaggaggcaactttagggtttagggtctttgattagagttatctt-gggttg-gaaacatt-gtaaacaccttgg-tgtgtgaaaatcatt 34256689  T
Q  155 gagtgtcttgttcattggagagattg 180  Q
    |||||||||||||||||| |||||||    
T  34256688 gagtgtcttgttcattggtgagattg 34256663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 4733684 - 4733778
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgg 138  Q
    |||||||||| | ||||||| ||| |||||||||||| ||||||| ||| || || || |||||| |||||||| |||||| |||||||||||||||    
T  4733684 gagagagaaacttgggaaatcaaaagaggtaactttagggttgagggtctttgattagagttctc-ttgggttgggaaaca-ttgtaaacaccttgg 4733778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 9765622 - 9765761
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaa-tgagggttctcttt-gggttgagaaacatttgtaaacaccttggg 139  Q
    |||||||||| | |||||   |||||||||||||| | ||||||| ||| || | ||||| |||||||  |||||| |||||||| ||||||||||||||    
T  9765622 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgagtgagg-ttctcttgagggttgggaaacatt-gtaaacaccttggg 9765719  T
Q  140 tgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||| |||||    |||||||||||||||||||| ||||||| ||||    
T  9765720 tgagtgaaa----ttgagtgtcttgttcattggtgagattgggaaa 9765761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 18655349 - 18655416
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||| |||||||||||||||| || |||||| ||| |||||| ||||||||||| ||||||||||||    
T  18655349 gaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgttttgttcattggtgagattgagaaa 18655416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 41366827 - 41366783
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttca 168  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  41366827 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttca 41366783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 10929689 - 10929808
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||| | ||| || || || |||||| |||||||| | |||| ||||||||||||||| | | |||||| ||||    
T  10929689 gggaaatcaaaggaggtaactttagggttg-gggtctttgattagagttctc-ttgggttg-ggaaca-ttgtaaacaccttggattagtgaaaatcatt 10929784  T
Q  155 gagtgtcttgttcattggagagat 178  Q
    ||||||||||||| |||| |||||    
T  10929785 gagtgtcttgttctttggtgagat 10929808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 4283468 - 4283540
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| ||||||||||||| || || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  4283468 gttgggaaacaattgtaaacaccttaggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 4283540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 17011543 - 17011600
Alignment:
Q  249 aaaggtaaaattgatagattagaactcaattaaaattgatgttcttcgtacatagaaa 306  Q
    |||| |||||||||||| | ||||| ||||||||||||| |||||| |||||||||||    
T  17011543 aaagataaaattgatagttgagaacccaattaaaattgaagttcttggtacatagaaa 17011600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 17545658 - 17545601
Alignment:
Q  249 aaaggtaaaattgatagattagaactcaattaaaattgatgttcttcgtacatagaaa 306  Q
    |||| |||||||||||| | ||||| ||||||||||||| |||||| |||||||||||    
T  17545658 aaagataaaattgatagttgagaacccaattaaaattgaagttcttggtacatagaaa 17545601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 38863761 - 38863841
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagg-gttctctttgggttgagaaacatttgtaaacaccttgg 138  Q
    |||| ||| ||| |||||||||||||||| ||| ||| ||||| |||||||| |||||| |||||||||||||||| |||||    
T  38863761 aaatcaaatgagctaactttaaggttgagtgtctttagtgaggagttctctt-gggttgggaaacatttgtaaacatcttgg 38863841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 44353736 - 44353809
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||| |||||||| | |||| |||||||| ||||||||||| | ||||||| ||||    
T  44353736 gttgggaaacaattgtaaacacattgggtgagtaaaaatcattgagtatcttgttcatttgtgagattgggaaa 44353809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 3772160 - 3772208
Alignment:
Q  137 gggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||| ||||||  ||||||||||||||||||||| ||||||||||||    
T  3772160 gggtgagtgaaaatgattgagtgtcttgttcattggtgagattgagaaa 3772208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 40221689 - 40221756
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||| |||||| |||||||||||||||| || |||||| || |||||||||||||| |||| |||||||    
T  40221689 gttgggaaacaattgtaaacaccttgggagagtgaaaatca-tgagtgtcttgttctttggtgagattg 40221756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 19491909 - 19491851
Alignment:
Q  126 gtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||| ||||||||| ||||||  ||||||||||||||||||||| ||||||| ||||    
T  19491909 gtaaacatcttgggtgagtgaaaat-attgagtgtcttgttcattggtgagattgggaaa 19491851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 39721118 - 39721197
Alignment:
Q  223 gataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattgatgttcttcgtacata 302  Q
    |||||| || |||||||| |||| | |||||||||||||| |||| |||||| | ||| | ||||||||||| |||||||    
T  39721118 gataatcgtaaattgattattaattcaaaggtaaaattgagagatgagaacttacttagagttgatgttcttagtacata 39721197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 32902502 - 32902436
Alignment:
Q  20 catgttttgaggaagacttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgag 86  Q
    ||||||||||||| | ||||| |||||||||| | ||||||| | | |||||||||||| |||||||    
T  32902502 catgttttgaggagggcttcaagagagagaaacttgggaaatcagatgaggtaactttagggttgag 32902436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 42435209 - 42435148
Alignment:
Q  118 aaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    ||||| |||||||||| ||||| || |||||| ||| |||||||||||||||||| |||||||    
T  42435209 aaacaattgtaaacactttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg 42435148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 137
Target Start/End: Original strand, 31513169 - 31513198
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttg 137  Q
    ||||||||||||||||||||||||||||||    
T  31513169 ttgggttgagaaacatttgtaaacaccttg 31513198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 6e-41; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 187 - 308
Target Start/End: Complemental strand, 13436914 - 13436794
Alignment:
Q  187 tgtaatgattcctaaaatttataatggaataaaaatgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattg 286  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  13436914 tgtaatggttcctaaaattgataatggaataaaa-tgataattgtgaattgattgtgaaatgaaaggtaaaattgatagattggaactcaattaaaattg 13436816  T
Q  287 atgttcttcgtacatagaaaca 308  Q
    |||||||  |||| ||||||||    
T  13436815 atgttctaggtacgtagaaaca 13436794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 9183324 - 9183183
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||| | |||||| |||||||| ||||||||||||||||    
T  9183324 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcct-gggttgggaaacatt-gtaaacaccttgggtg 9183227  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||||||||    
T  9183226 agtgaaaatcattgagtgtcttgttcattggtgagattgagaaa 9183183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 33211478 - 33211337
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||||||||||||  |||||| ||| || || || |||||||| |||||| |||||||| |||||||||||||||     
T  33211478 gagagagaaacttgggaaatcaaaggaggtaactttacagttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtc 33211381  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||| ||||||||||| ||||||| ||||    
T  33211380 actgaaaatcattgagtgttttgttcattggtgagattgggaaa 33211337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 28137685 - 28137568
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| ||||||| |||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| |||||||    
T  28137685 aaatcaaaggagttaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgag 28137588  T
Q  158 tgtcttgttcattggagaga 177  Q
    ||||||||||||||| ||||    
T  28137587 tgtcttgttcattggtgaga 28137568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 4045351 - 4045439
Alignment:
Q  96 tgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||| | |||| ||||||||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||||| ||||    
T  4045351 tgagggttctctt-gagttgggaaacatttgtaaacacctagggtgagtgaaaatcattgagtgtcttgtttattggagagattgggaaa 4045439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 33160645 - 33160505
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||| || |||||||| | |||||||||||||||| ||||||||||| || || || |||||| |||||||| |||||| ||||||||||||| ||||    
T  33160645 gagagaaaacttggggaa-tcaaaggaggtaactttagggttgagagtctttgattagagttctc-ttgggttgggaaaca-ttgtaaacacctt-ggtg 33160550  T
Q  142 aatgaaaaa-cattgagtgtcttgttcattggagagattgagaaa 185  Q
    | ||||||| ||||||||||||| |||||||| ||||||| ||||    
T  33160549 agtgaaaaatcattgagtgtcttattcattggtgagattgggaaa 33160505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 5406491 - 5406351
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||| ||||||| |||| || ||| || || || |||||||  |||||| |||||||| ||||||||||||| ||    
T  5406491 gagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctctc-gggttgggaaacatt-gtaaacaccttgg-tg 5406395  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  5406394 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 5406351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 5410816 - 5410676
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||| ||||||| |||| || ||| || || || |||||||  |||||| |||||||| ||||||||||||| ||    
T  5410816 gagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctctc-gggttgggaaacatt-gtaaacaccttgg-tg 5410720  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  5410719 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 5410676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 16452622 - 16452482
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||| | | |||||||  ||| || ||| || || || |||||||| ||||||||||||||| ||||||||||||| ||    
T  16452622 gagagagaaacttgggaaatcaaagtaagcaactttagagtttagggtctttgattagagttctctt-gggttgagaaacatt-gtaaacaccttgg-tg 16452526  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  16452525 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 16452482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 26954565 - 26954453
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||||||| || || || ||| |||| || ||| |||||||| ||||||||||| || || |||||| ||||    
T  26954565 gggaaatcaaaggaggtaactttagggttgagagtctttgattagagttatcttagg-ttgggaaacatt-gtaaacacctttggggagtgaaaatcatt 26954468  T
Q  155 gagtgtcttgttcat 169  Q
    |||||||||||||||    
T  26954467 gagtgtcttgttcat 26954453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 391
Target Start/End: Complemental strand, 29181786 - 29181642
Alignment:
Q  249 aaaggtaaaattgatagattagaactcaattaaaattgatgttcttcgtacatagaa--acattaaggaaaagatagaagaagactaagtcataagacta 346  Q
    |||| ||||||||||| || ||||| |||||| | ||| ||||||| ||||||| ||  | |  || | ||||||| ||||| ||||||||  |||||||    
T  29181786 aaagataaaattgataaatgagaacacaattatagttggtgttcttagtacataaaagaagagaaaaggaaagatacaagaaaactaagtcccaagacta 29181687  T
Q  347 agccattactcgactagagagtaccaaagggagagaggagagact 391  Q
    || |||||||| |||| ||||||| ||||||||||||||||||||    
T  29181686 agtcattactctactaaagagtactaaagggagagaggagagact 29181642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 5413682 - 5413545
Alignment:
Q  45 agagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaat 144  Q
    ||||||| | ||||||| |||||||| ||||||| |||| || ||| || || || |||||||  |||||| |||||||| |||||||| |||| ||| |    
T  5413682 agagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctctc-gggttgggaaacatt-gtaaacacattgg-tgagt 5413586  T
Q  145 gaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  5413585 gaaaatcattgagtgtcttgttcattggtgagattgggaaa 5413545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 30834829 - 30834689
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| |||||| | ||||||| |||| |  ||| || || || |||||||| ||||||||||||||| |||||||||| || ||    
T  30834829 gagagagaaacttgagaaatcaaaggaagcaactttagggtttatggtctttgattagagttctctt-gggttgagaaacatt-gtaaacacctcgg-tg 30834733  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  30834732 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 30834689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 405
Target Start/End: Complemental strand, 28983616 - 28983527
Alignment:
Q  316 aaagatagaagaagactaagtcataagact-aagccattactcgactagagagtaccaaagggagagaggagagacttcaatcatttttct 405  Q
    ||||||||||||||||| |||| ||||||  ||| |||||||| | |||||||||||||| ||||||||| |||||||| |||||||||||    
T  28983616 aaagatagaagaagacttagtcctaagacccaagtcattactctattagagagtaccaaacggagagaggggagacttc-atcatttttct 28983527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 2171758 - 2171683
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||| ||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  2171758 ttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 2171683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 3039131 - 3039055
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||| |||||||||||| |||| |||||| |||||| ||||||||||||||| ||||||| ||||    
T  3039131 ttgggttgggaaacatt-gtaaacaccttgagtgagtgaaaatcattgaatgtcttgttcattggtgagattgggaaa 3039055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 16567094 - 16567201
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| |||||||| |||| || ||| || || || |||||||| || ||| |||||||| ||||||||||||||||| |||||| ||||    
T  16567094 gggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggtttg-gaaacatt-gtaaacaccttgggtgagtgaaaatcatt 16567191  T
Q  155 gagtgtcttg 164  Q
    ||||||||||    
T  16567192 gagtgtcttg 16567201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 21593608 - 21593680
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  21593608 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 21593680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 31404967 - 31404842
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcatta-atgagggttctctttgggttgagaaacatttgtaaacaccttgggt 140  Q
    |||||||||| | ||||||| |||||||| ||||||| |||| || ||| ||  || || |||||||| ||||||  ||||||| ||||||||||||| |    
T  31404967 gagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtcttttgattagagttctctt-gggttggaaaacatt-gtaaacaccttgg-t 31404871  T
Q  141 gaatgaaaaacattgagtgtcttgttcat 169  Q
    || |||||| |||||||||||||||||||    
T  31404870 gagtgaaaatcattgagtgtcttgttcat 31404842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 5043571 - 5043643
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||| | || |||||| ||| |||||||||||||||| | ||||||||||||    
T  5043571 gttgggaaacaattgtaaacaccttgtgagagtgaaaatcat-gagtgtcttgttcattcgtgagattgagaaa 5043643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 603304 - 603237
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||| |||||| ||||||||||||||||  | |||||| ||| |||||||||||||||||| |||||||    
T  603304 gttgggaaacaattgtaaacaccttgggatagtgaaaatcat-gagtgtcttgttcattggtgagattg 603237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 26830342 - 26830289
Alignment:
Q  118 aaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattgg 172  Q
    ||||| |||||||||||||||| || |||||| || |||||||||||||||||||    
T  26830342 aaacaattgtaaacaccttgggagagtgaaaatca-tgagtgtcttgttcattgg 26830289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 165949 - 165904
Alignment:
Q  249 aaaggtaaaattgatagattagaactcaattaaaattgatgttctt 294  Q
    |||| ||||| |||||||||||||| |||||||||||| |||||||    
T  165949 aaagataaaagtgatagattagaacacaattaaaattggtgttctt 165904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 2973163 - 2973091
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| || | |||||| |||||||||| ||||||| ||||    
T  2973163 gttgggaaacaattgtaaacaccttgggagagtgaaaatca-taagtgtcgtgttcattggtgagattgggaaa 2973091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 3808933 - 3808861
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||   ||||||||||||||||| ||||||| ||||    
T  3808933 gttgggaaacaattgtaaacaccttgggagagtgaaaatcaca-agtgtcttgttcattggtgagattgggaaa 3808861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 14003411 - 14003346
Alignment:
Q  222 tgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattga 287  Q
    |||||||  |||||||||| | |  |||||||||||||||||||| |||||||  |||||||||||    
T  14003411 tgataatgatgaattgattatcatgtgaaaggtaaaattgatagactagaacttcattaaaattga 14003346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 16568931 - 16569038
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||  ||| |||| |||| || ||| || || || |||||||| || ||| |||||||| ||||||||||||||| | |||||| ||||    
T  16568931 gggaaatcaaaggaattaaatttagggttaagggtctttgattagagttctcttgggtttg-gaaacatt-gtaaacaccttgggtaagtgaaaatcatt 16569028  T
Q  155 gagtgtcttg 164  Q
    ||||||||||    
T  16569029 gagtgtcttg 16569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 17762933 - 17763006
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||| ||| | || ||||||    ||||||||||||||||||| ||||||||||||    
T  17762933 gttgggaaacaattgtaaacactttgagagagtgaaaattcatgagtgtcttgttcattggtgagattgagaaa 17763006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 420
Target Start/End: Original strand, 29346722 - 29346890
Alignment:
Q  253 gtaaaattgatagattagaactcaattaaaattgatgttcttcgtacatagaaacattaaggaaaagatagaagaagactaagtcataagac-taagcca 351  Q
    ||||||||||||| | ||||| |||||||||||||||||||| ||||||| ||| | ||| ||||||||||||||||||| ||||  ||||| |||| ||    
T  29346722 gtaaaattgatagttgagaacccaattaaaattgatgttcttggtacataaaaatactaaagaaaagatagaagaagacttagtccaaagacttaagtca 29346821  T
Q  352 ttactcgactagagagtaccaaagggagagaggagagacttcaatcatttttcttcatacctttgcttc 420  Q
    |||| |    ||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||    
T  29346822 ttaccctcaaagagagtaccaaagggagaaaggagagactttcatcatttttcttcatgcctttgcttc 29346890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 30025025 - 30024884
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| || |||| |||| || ||||||||||||||||    
T  30025025 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttagg-ttgaaaaacgtt-gtaaacaccttgggtg 30024928  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||||||||    
T  30024927 agtgaaaatcattgagtgtcttgttcattggtgagattgagaaa 30024884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 47674236 - 47674095
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||| ||||||||  ||| || || || |||||||| ||||||  ||||||| ||||||||||||||||    
T  47674236 gagagagaaacttgggaaatcaaaggaggtaacttcaaggttgaaggtctttgattagagttctctt-gggttggaaaacatt-gtaaacaccttgggtg 47674139  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||||||||    
T  47674138 agtgaaaatcattgagtgtcttgttcattggtgagattgagaaa 47674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 47676429 - 47676288
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||| |||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  47676429 gagagagaaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 47676332  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| || ||||||||||||||||||| ||||||||||||    
T  47676331 agtgaaaatcaatgagtgtcttgttcattggtgagattgagaaa 47676288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 43864119 - 43864255
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |  |||||||| |||||| |||||||| ||||||||||||||||    
T  43864119 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 43864216  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||||||||||||||||| |||||||    
T  43864217 agtgaaaatcattgagtgtcttgttcattggtgagattg 43864255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 1113532 - 1113673
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| ||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||| ||||||||    
T  1113532 gagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaacttgggtg 1113629  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||| | ||||||||||||    
T  1113630 agtgaaaatcattgagtgtcttgttcatttgtgagattgagaaa 1113673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 14070126 - 14069985
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| || |||| ||| || || || |||||||| |||||| | |||||| ||||||||||||||||    
T  14070126 gagagagaaacttgggaaatcaaaggaggtaactttagggctgagggtctttgattagagttctctt-gggttgggtaacatt-gtaaacaccttgggtg 14070029  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  14070028 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 14069985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 14380154 - 14380013
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| || |||| ||| || || || |||||||| |||||| | |||||| ||||||||||||||||    
T  14380154 gagagagaaacttgggaaatcaaaggaggtaactttagggctgagggtctttgattagagttctctt-gggttgggtaacatt-gtaaacaccttgggtg 14380057  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  14380056 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 14380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 36574814 - 36574672
Alignment:
Q  37 ttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacctt 136  Q
    |||| |||||||||| | | ||||| |||||||||||||||| ||||||  ||| || |||||||||||||| ||||||  |||||||||||||||||||    
T  36574814 ttcaagagagagaaaattgagaaatcaaaggaggtaactttagggttgacggtctttgatgagggttctctt-gggttggaaaacatttgtaaacacctt 36574716  T
Q  137 gggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
     ||||| ||||||  || |||||||||||| |||||||||||||    
T  36574715 aggtgagtgaaaattatcgagtgtcttgtttattggagagattg 36574672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 4253823 - 4253694
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||  ||  ||||||||||||| ||||||  ||||||||||||||||||| ||||    
T  4253823 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttggtgagggttctctt-gggttggaaaacatttgtaaacaccttaggtg 4253725  T
Q  142 aatgaaaaacattgagtgtcttgttcattgg 172  Q
    | |||||| |||||||| |||||||||||||    
T  4253724 agtgaaaatcattgagtttcttgttcattgg 4253694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 4538820 - 4538697
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||||||| |||||||||||||||| || || ||  ||||||| |||||| |||| ||| ||||||||||||||||| |||||| ||||    
T  4538820 gggaaatcaaaggaggtaattttaaggttgagagtctttgattagaattctctt-gggttgggaaaaatt-gtaaacaccttgggtgagtgaaaatcatt 4538723  T
Q  155 gagtgtcttgttcattggagagattg 180  Q
    |||||||||||||||||| |||||||    
T  4538722 gagtgtcttgttcattggtgagattg 4538697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 31733262 - 31733121
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| ||| ||||||||||||  |||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  31733262 gagagagaaacttgagaaatcaaaagaggtaactttagagttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 31733165  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| |||| |||||||    
T  31733164 agtgaaaatcattgagtgtcttgttcattggtgagactgagaaa 31733121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 48491470 - 48491595
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| |||||||| |||||||| |||||| |||||||    
T  48491470 aaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacactttgggtgagtgaaaatcattgag 48491567  T
Q  158 tgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||| ||||||| ||||    
T  48491568 tgtcttgttcattggtgagattgggaaa 48491595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 38671502 - 38671374
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| |||||||||||||||||  ||||| ||||    
T  38671502 gggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagcgaaaatcatt 38671405  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  38671404 gagtgtcttgttcatttgtgagattgggaaa 38671374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 43 - 180
Target Start/End: Original strand, 18126520 - 18126655
Alignment:
Q  43 agagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtga 142  Q
    ||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||| | |||||| |||||||| ||||||| |||||||||    
T  18126520 agagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcat-gggttgggaaacatt-gtaaacaacttgggtga 18126617  T
Q  143 atgaaaaacattgagtgtcttgttcattggagagattg 180  Q
     |||||| |||||||||| ||||||||||| |||||||    
T  18126618 gtgaaaatcattgagtgttttgttcattggtgagattg 18126655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 24526196 - 24526049
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||| ||| | ||||||| ||||||| |||||||| ||||||| ||| || || | ||||||||| || ||| |||||||| ||||||||||    
T  24526196 cttcaagagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgattatggttctcttagg-ttgggaaacatt-gtaaacacct 24526099  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||| |||||| |||||||||||||||||||||| || |||| ||||    
T  24526098 tgggtgagtgaaaatcattgagtgtcttgttcattggtgaaattgggaaa 24526049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 30843561 - 30843387
Alignment:
Q  20 catgttttgaggaagacttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt----------- 108  Q
    |||||||||||||||  ||||||||||||||| |   ||||| |||||||||||||||| | || |||||| || || |||||||||||               
T  30843561 catgttttgaggaagggttcaggagagagaaacttaagaaatcaaaggaggtaactttaggatttagagtctttgataagggttctcttgaaaggttctc 30843462  T
Q  109 -tgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgag 182  Q
     |||||||||||||||||||||||||||| | ||| | |||| |||||||| |||||||||||||||||||||||    
T  30843461 ttgggttgagaaacatttgtaaacaccttagatgagttaaaatcattgagtatcttgttcattggagagattgag 30843387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 36146637 - 36146560
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  36146637 ttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 36146560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 185
Target Start/End: Original strand, 48489309 - 48489447
Alignment:
Q  45 agagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaat 144  Q
    ||||||| | ||||||| |||||||||||||||| ||||||  ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |    
T  48489309 agagaaacttgggaaatcaaaggaggtaactttagggttgatggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagt 48489406  T
Q  145 gaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||| |||| | ||||||||||||||| ||||||| ||||    
T  48489407 gaaaatcattaaatgtcttgttcattggtgagattgggaaa 48489447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 4586036 - 4586177
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||| ||| | ||||||| |||||| ||||||||| |||||||  || || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  4586036 gagagaaaaacttgggaaatcaaaggatgtaactttagggttgaggctctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 4586133  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | || ||| |||||||||||||||||||||| ||||||| ||||    
T  4586134 agtgtaaatcattgagtgtcttgttcattggtgagattgggaaa 4586177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 23343862 - 23343985
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||| ||||||||| ||| ||||||| || || ||||||||||| || ||| |||||||||  ||||||||||||||| |||||| ||||    
T  23343862 gggaaatcaaaggatgtaactttagggtcgagagtctttgattagggttctcttaggtttg-gaaacatttcaaaacaccttgggtgagtgaaaatcatt 23343960  T
Q  155 gagtgtcttgttcattggagagatt 179  Q
    || ||||| ||||||||| ||||||    
T  23343961 gaatgtctagttcattggtgagatt 23343985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 31105671 - 31105545
Alignment:
Q  57 gaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattga 156  Q
    ||||| |||||||||||||||| ||||||| ||| || || |  ||| |||| |||| |||||||||| ||||||||||||||||| |||||| ||||||    
T  31105671 gaaatcaaaggaggtaactttagggttgagggtctttgattatagttatcttggggt-gagaaacatt-gtaaacaccttgggtgagtgaaaatcattga 31105574  T
Q  157 gtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||| | ||||||| ||||    
T  31105573 gtgtcttgttcatttgtgagattgggaaa 31105545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 23554915 - 23555055
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||| | ||||||  ||| || || || |||||||| | |||| |||||||| ||||||||||||| ||    
T  23554915 gagagagaaacttgggaaatcaaaggaggtaacttcagggttgaaggtctttgattagagttctctt-gagttgggaaacatt-gtaaacaccttgg-tg 23555011  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  23555012 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 23555055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 24515053 - 24514913
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  24515053 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 24514957  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  24514956 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 24514913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 29990930 - 29991070
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||  ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  29990930 gagagagaaacttgggaaatcaaaggagacaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 29991026  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  29991027 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 29991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 57 - 185
Target Start/End: Original strand, 26417206 - 26417332
Alignment:
Q  57 gaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattga 156  Q
    ||||| |||||||||||||||| ||||||| ||| || || || |||||||| || ||| |||||||| |||||||||||| | |  |||||| ||||||    
T  26417206 gaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-ggattgggaaacatt-gtaaacaccttgagcgggtgaaaatcattga 26417303  T
Q  157 gtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| ||||||| ||||    
T  26417304 gtgtcttgttcattggtgagattgggaaa 26417332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 265 - 412
Target Start/End: Original strand, 29367259 - 29367405
Alignment:
Q  265 gattagaactcaattaaaattgatgttcttcgtacatagaaacattaaggaaaagatagaagaagactaagtcataagac-taagccattactcgactag 363  Q
    |||||||||| || |||||||||| ||||| ||||||| ||| |  |||  || ||||||||||||||||||| |||||| |||| |||||||| |||||    
T  29367259 gattagaacttaaataaaattgatcttcttggtacata-aaagagaaagagaaggatagaagaagactaagtcctaagacttaagtcattactctactag 29367357  T
Q  364 agagtaccaaagggagagaggagagacttcaatcatttttcttcatacc 412  Q
    ||||||  |||| |||||| || ||||||| |||| |||||||||||||    
T  29367358 agagtattaaagagagagatgatagacttc-atcacttttcttcatacc 29367405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 41317746 - 41317586
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt------------tgggttgagaaacat 123  Q
    ||||| |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |||||||||||            ||||||| |||||||    
T  41317746 cttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttgaggggttctcttgggttgggaaacat 41317647  T
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | ||||||||||||| ||| |||||| |||||||| ||||||||||||| ||||||| ||||    
T  41317646 t-gtaaacaccttggatgagtgaaaatcattgagtctcttgttcattggtgagattgggaaa 41317586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 2761595 - 2761454
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||| ||| | ||||||| |||||||||||||||| ||||||   |  || || || |||||||| |||||| |||||||| |||||||| |||||||    
T  2761595 gagagataaacttgggaaatcaaaggaggtaactttagggttgatgatatttgattagagttctctt-gggttgggaaacatt-gtaaacacattgggtg 2761498  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| ||| |||||||||||||||||| ||||||| ||||    
T  2761497 agtgaaaatcatcgagtgtcttgttcattggtgagattgggaaa 2761454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 4178650 - 4178790
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| |||||| | ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  4178650 gagagagaaacttgagaaatcaaaggaagcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 4178746  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  4178747 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 4178790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 8153274 - 8153358
Alignment:
Q  99 gggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||| |||||| |||||||| |||||||| |||||||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  8153274 gggttctctt-gggttgggaaacatt-gtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 8153358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 31518684 - 31518811
Alignment:
Q  56 ggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattg 155  Q
    |||||| ||||||| |||||||| |||| || ||| || || | |||||| |||||||||  ||||||  ||||||||||||||||| |||||| ||| |    
T  31518684 ggaaatcaaaggagataactttagggttaagggtctttgattatggttct-tttgggttggaaaacatc-gtaaacaccttgggtgagtgaaaatcatcg 31518781  T
Q  156 agtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||||| ||||||| ||||    
T  31518782 agtgtcttgttcattggtgagattgggaaa 31518811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 41649289 - 41649167
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| |||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||||| | |||||| ||||    
T  41649289 gggaaatcaaaggagttaactttagggttaag-gtcttttattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtaagtgaaaatcatt 41649193  T
Q  155 gagtgtcttgttcattggagagattg 180  Q
    |||||||||||||||| | |||||||    
T  41649192 gagtgtcttgttcatttgtgagattg 41649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 185
Target Start/End: Original strand, 19502068 - 19502193
Alignment:
Q  57 gaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattga 156  Q
    ||||| ||| |||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||| ||| || ||||||    
T  19502068 gaaatcaaatgaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tgagtgagaatcattga 19502164  T
Q  157 gtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||| ||| ||||||| ||||    
T  19502165 gtgtcttgttcagtggtgagattgcgaaa 19502193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 29292199 - 29292251
Alignment:
Q  222 tgataattgtgaattgattgttaaatgaaaggtaaaattgatagattagaact 274  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  29292199 tgataattgtgaattgattattaagtgaaaggtaaaattgatagattagaact 29292251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 496263 - 496135
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||| |||||||||||||||||||| ||| || || || |||||||| || ||| |||||||| ||||| ||||||||||| |||||| ||||    
T  496263 gggaaatcaaatgaggtaactttaaggttgagggtctttgattagagttctctt-ggattgggaaacatt-gtaaaaaccttgggtgagtgaaaatcatt 496166  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
     ||||| ||||| ||| | ||||||| ||||    
T  496165 tagtgttttgttaatttgtgagattgggaaa 496135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 27347760 - 27347833
Alignment:
Q  111 ggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||| |||||||| |||||||| |||||||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  27347760 ggttgggaaacatt-gtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 27347833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 5514238 - 5514165
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattga 181  Q
    |||||||| |||||| ||||||||||||| | ||| |||||| |||||||| ||||||||||| ||||||||||    
T  5514238 ttgggttgggaaacacttgtaaacaccttcgatgagtgaaaatcattgagtttcttgttcatttgagagattga 5514165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 12098087 - 12098011
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||  |||||| ||||    
T  12098087 ttgggttgggaaacatt-gtaaacatcttgggtgagtgaaaatcattgagtgtcttgttcattggttagattgggaaa 12098011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 35853855 - 35853930
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||| ||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  35853855 ttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 35853930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 48408743 - 48408818
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||| ||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  48408743 ttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 48408818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 25615752 - 25615858
Alignment:
Q  56 ggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattg 155  Q
    |||||| ||||||| ||||||||||||| || ||| || || || |||||||| ||||||  ||||||| |||||||||||||||||  ||||| |||||    
T  25615752 ggaaatcaaaggagttaactttaaggttaagggtctttgattagagttctctt-gggttggaaaacatt-gtaaacaccttgggtgagagaaaatcattg 25615849  T
Q  156 agtgtcttg 164  Q
    |||||||||    
T  25615850 agtgtcttg 25615858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 2361196 - 2361124
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  2361196 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 2361124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 410
Target Start/End: Original strand, 32471143 - 32471234
Alignment:
Q  319 gatagaagaagactaagtcataagac-taagccattactcgactagagagtaccaaagggagagaggagagacttcaatcatttttcttcata 410  Q
    ||||||||||||||||||   ||||| ||||  ||||||||    ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  32471143 gatagaagaagactaagttcaaagacataagttattactcgcaaggagagtaccaaagggagagaggagagacttc-atcaattttcttcata 32471234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 23565359 - 23565222
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaa-catttgtaaacacc 134  Q
    ||||| |||||||||| | |||| || |||||||||||||||| |||| || ||| || || ||| |||||||  |||| ||||| ||||||||||||||    
T  23565359 cttcaagagagagaaacttgggatatcaaaggaggtaacttta-ggttaagggtctttgattagg-ttctctt--ggtttagaaaacatttgtaaacacc 23565264  T
Q  135 ttgggtgaatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    |||||||| ||   |||||  ||||||||||||||||| ||||||    
T  23565263 ttgggtgagtg---aacatgaagtgtcttgttcattggtgagatt 23565222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 22328622 - 22328568
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgtt 166  Q
    |||| |||||| |||||||||||||| | ||||||||| ||||||||||||||||    
T  22328622 gttgggaaacaattgtaaacaccttgagggaatgaaaatcattgagtgtcttgtt 22328568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 4508930 - 4508858
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| || ||||||||||||| ||||| ||||||| ||||    
T  4508930 gttgggaaacaattgtaaacaccttgggagagtgaaaatca-tgagtgtcttgttgattggtgagattgggaaa 4508858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 34310928 - 34310868
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  34310928 ttgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 34310868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 3756682 - 3756762
Alignment:
Q  223 gataattgtgaattgattgttaaatgaaaggtaaaa-ttgatagattagaactcaattaaaattgatgttcttcgtacata 302  Q
    ||||||||  |||||||| |||||| |||||||||| ||||||||| |||| ||||||| | ||| ||||||| |||||||    
T  3756682 gataattgcaaattgattattaaattaaaggtaaaaattgatagatgagaattcaattagagttggtgttcttagtacata 3756762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 8359535 - 8359469
Alignment:
Q  118 aaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||| |||||||||||||| | || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  8359535 aaacaattgtaaacaccttgagagagtgaaaatcat-gagtgtcttgttcattggggagattgggaaa 8359469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 25767170 - 25767124
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattg 171  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  25767170 ttgtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattg 25767124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 3258938 - 3259011
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| ||||||||||||||||  | ||||||    ||||||||||||||||||| ||||||| ||||    
T  3258938 gttgggaaacaattgtaaacaccttgggaaagtgaaaattcatgagtgtcttgttcattggtgagattgggaaa 3259011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 6431915 - 6431987
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||| ||||| || |||||| ||| ||||||||||||||||||  |||||| ||||    
T  6431915 gttgggaaacaattgtaaacacattgggagagtgaaaatcat-gagtgtcttgttcattggttagattgggaaa 6431987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 6360136 - 6360077
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattgg 172  Q
    |||| |||||| || ||||||||||||| ||||||||| || |||||| ||||||||||||    
T  6360136 gttgggaaacaattttaaacaccttgggagaatgaaaatca-tgagtgacttgttcattgg 6360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 8153198 - 8153246
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttg 84  Q
    ||||| |||||||||| | || |||| ||||||||||||||||||||||    
T  8153198 cttcaagagagagaaactaggaaaatcaaaggaggtaactttaaggttg 8153246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 12098171 - 12098099
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt 108  Q
    ||||| |||||| ||| | ||||||| |||||||||||||||| ||||||| ||| || || |||||| ||||    
T  12098171 cttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttttctt 12098099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 22269921 - 22269989
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||| || ||||||||||||| || ||||||    ||||||||||||||||||| ||||||| ||||    
T  22269921 gaaacaattctaaacaccttgggagagtgaaaattcatgagtgtcttgttcattggtgagattgggaaa 22269989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 405
Target Start/End: Original strand, 29293427 - 29293486
Alignment:
Q  345 taagccattactcgactagagagtaccaaagggagagaggagagacttcaatcatttttct 405  Q
    |||| |||||||| | ||||||||||| ||  ||||||||||||||||| |||||||||||    
T  29293427 taaggcattactctattagagagtacccaaaagagagaggagagacttc-atcatttttct 29293486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 39731317 - 39731371
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttg 164  Q
    |||||||| |||||||| ||||||||||||| ||| |||||| ||||||||||||||    
T  39731317 ttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttg 39731371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 4552917 - 4552789
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    |||||||||||||||||||||||| ||||||| ||| |||||   ||||||||| ||||||||||||||| |||||||||||||||||  ||||| ||||    
T  4552917 gggaaattaaaggaggtaactttagggttgagggtctttaattgaggttctctt-gggttgagaaacatt-gtaaacaccttgggtgagggaaaatcatt 4552820  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||||| ||||||||||||    
T  4552819 gagtgtcttgttcattggtgagattgagaaa 4552789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 13138286 - 13138130
Alignment:
Q  24 ttttgaggaaga-cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaaca 122  Q
    |||||||||||| ||||| |||||| ||| | ||||||| |||||||||||||||| ||||||| ||| || || ||||||||||| |||| | ||||||    
T  13138286 ttttgaggaagagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttggggtgg-gaaaca 13138188  T
Q  123 tttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattga 181  Q
    || ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  13138187 tt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattga 13138130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 1833397 - 1833538
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||| |||||||||||||||| ||| || || || |||||||| || ||| |||||||| ||||||||||||||||    
T  1833397 gagagagaaacttgggaaatcaaaggagataactttaaggttgagggtctttgattagagttctctt-ggattgggaaacatt-gtaaacaccttgggtg 1833494  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  1833495 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 1833538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 31659113 - 31659249
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||  |||||||| ||||||||||||||||    
T  31659113 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttcggaaacatt-gtaaacaccttgggtg 31659210  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||||||||||||||||| |||||||    
T  31659211 agtgaaaatcattgagtgtcttgttcattggtgagattg 31659249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 50169509 - 50169367
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||||||| | ||||||| |||||||||||||||| ||||||| ||  || || |||||| |||| |||||| |||||||| ||||| ||||    
T  50169509 cttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggttttttattagggttatctt-gggttgggaaacatt-gtaaatacct 50169412  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||    
T  50169411 tgggtgagtgaaaatcattgagtgtcttgttcattggtgagattg 50169367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 197185 - 197060
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| |||||||    
T  197185 aaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgag 197088  T
Q  158 tgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||| | ||||||||||||    
T  197087 tgtcttgttcatttgtgagattgagaaa 197060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 10925098 - 10925235
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | || |||| |||||||||||||||| ||||||| ||| || || |  |||||||| |||||| |||||||| ||||||||||||||||    
T  10925098 gagagagaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattatagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 10925195  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattga 181  Q
    | |||||| |||||||||||||||||||||| ||||||||    
T  10925196 agtgaaaatcattgagtgtcttgttcattggtgagattga 10925235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 28223714 - 28223573
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| | | ||||||||||||    
T  28223714 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gaagacaccttgggtg 28223617  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  28223616 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 28223573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 44455035 - 44455176
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | || |||| |||||||||||||||| ||||||| ||| || || || ||| |||| |||||| |||||||| ||||||||||||||||    
T  44455035 gagagagaaacttggtaaatcaaaggaggtaactttagggttgagggtctttgattagagttttctt-gggttgggaaacatt-gtaaacaccttgggtg 44455132  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  44455133 agtgaaaaccattgagtgtcttgttcattggtgagattgggaaa 44455176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 49918224 - 49918366
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||  ||| || || || |||||||| || ||| ||||||||   ||||||||||||||    
T  49918224 gagagagaaacttgggaaatcaaaggaggtaactttagggttgaaggtctttgattagagttctctt-ggattgggaaacattataaaacaccttgggtg 49918322  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||||||||    
T  49918323 agtgaaaatcattgagtgtcttgttcattggtgagattgagaaa 49918366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 3156741 - 3156881
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| || ||| |||||||| ||||||||| ||| ||    
T  3156741 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggtttg-gaaacatt-gtaaacaccctgg-tg 3156837  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||||||||    
T  3156838 agtgaaaatcattgagtgtcttgttcattggtgagattgagaaa 3156881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 3847401 - 3847273
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||| ||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  3847401 gggaaatcaaaggaggtaactttagggtcgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 3847304  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  3847303 gagtgtcttgttcatttgtgagattgggaaa 3847273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 928258 - 928142
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||  ||| || || ||| ||||||| |||||| |||||||||||||||||||||||||| |||||| || |    
T  928258 gggaaatcaaaggaggtaactttatggttgaaggtctttgattaggattctctt-gggttgggaaacatttgtaaacaccttgggtgagtgaaaatcaat 928160  T
Q  155 gagtgtcttgttcattgg 172  Q
    ||||||||||||| ||||    
T  928159 gagtgtcttgttctttgg 928142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 28220519 - 28220384
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| ||| |||| | ||||||||||||||    
T  28220519 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaagcatt-gaaaacaccttgggtg 28220422  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    | |||||| ||||||||||||| |||||||| ||||||    
T  28220421 agtgaaaatcattgagtgtcttattcattggtgagatt 28220384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 45644654 - 45644507
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||| ||| | ||||||| ||||||| |||||||| ||||||| ||| || || ||||||||||| || | || ||||||| ||||||| ||    
T  45644654 cttcaagagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgattagggttctcttaggttgga-aaacatt-gtaaacatct 45644557  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||| |||||| |||| ||||||||||||||||| ||||||||||||    
T  45644556 tgggtgagtgaaaatcattaagtgtcttgttcattggtgagattgagaaa 45644507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 50167487 - 50167327
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt------------tgggttgagaaacat 123  Q
    ||||| |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |||||||||||            ||||||| |||||||    
T  50167487 cttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttgaggggttctcttgggttgggaaacat 50167388  T
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  50167387 t-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 50167327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 37503847 - 37503706
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||||| |||||| ||||||| ||| || || || ||||| || ||||||  ||| ||| ||||||||||||||||    
T  37503847 gagagagaaacttgggaaatcaaaggaggtgactttagggttgagggtctttgattagagttctatt-gggttggaaaatatt-gtaaacaccttgggtg 37503750  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  37503749 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 37503706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 834447 - 834319
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||| ||| || || |  |||||||| |||||| |||||||| ||||||||||||||||  |||||| ||||    
T  834447 gggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctctt-gggttgggaaacatt-gtaaacaccttgggtgcgtgaaaatcatt 834350  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  834349 gagtgtcttgttcatttgtgagattgggaaa 834319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 44650444 - 44650315
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||  || |||| || |||||||| ||  |||||||||||||  | | || |||||||||||||||| |||||||| ||||||  |||    
T  44650444 gggaaatcaaaggagaaaattttagggatgagagtctttggtgagggttctcttaagttgga-aaacatttgtaaacactttgggtgagtgaaaattatt 44650346  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||||||||||||||||||    
T  44650345 gagtgtcttgttcattggagagattgagaaa 44650315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 3189206 - 3189340
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |  |||||| |||||||| |||||| ||||||||||||| ||||    
T  3189206 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctc-ttgggttgggaaaca-ttgtaaacacctt-ggtg 3189302  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    | |||||| || ||||||||||||||||||| ||||||    
T  3189303 agtgaaaatcactgagtgtcttgttcattggtgagatt 3189340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 3198023 - 3198157
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |  |||||| |||||||| |||||| ||||||||||||| ||||    
T  3198023 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctc-ttgggttgggaaaca-ttgtaaacacctt-ggtg 3198119  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    | |||||| || ||||||||||||||||||| ||||||    
T  3198120 agtgaaaatcactgagtgtcttgttcattggtgagatt 3198157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 3206862 - 3206996
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |  |||||| |||||||| |||||| ||||||||||||| ||||    
T  3206862 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctc-ttgggttgggaaaca-ttgtaaacacctt-ggtg 3206958  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    | |||||| || ||||||||||||||||||| ||||||    
T  3206959 agtgaaaatcactgagtgtcttgttcattggtgagatt 3206996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 37560162 - 37560027
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| ||| |||||||||||||||||||| ||| || || || |||||||| || |||| ||||||| |||||||| || ||||    
T  37560162 gagagagaaacttgagaaatcaaatgaggtaactttaaggttgagggtctttgattagagttctcttgggtttga-aaacatt-gtaaacacattaggtg 37560065  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    | |||||| |||||||||||||||||||||| ||||||    
T  37560064 agtgaaaatcattgagtgtcttgttcattggtgagatt 37560027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 46064787 - 46064934
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||| ||| | ||||||| |||| |||||||||||  |||||| ||| || || | ||||||||| |||| || ||||||| ||||||||||    
T  46064787 cttcaagagagaaaaacttgggaaatcaaagaaggtaactttattgttgagggtctttgattatggttctcttggggtgga-aaacatt-gtaaacacct 46064884  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||| |||||| |||||||||||||||||||| | ||||||| ||||    
T  46064885 tgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaa 46064934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 15820176 - 15820310
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||| ||| | ||||||| ||| |||||||||||| ||||||| ||| || || || |||||||| | |||| |||||||| ||||||||||    
T  15820176 cttcaagagagaaaaacttgggaaatcaaaagaggtaactttagggttgagggtctttgattagagttctctt-gagttgggaaacatt-gtaaacacct 15820273  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattgg 172  Q
    ||||||| |||||| ||||||||||||||||| ||||    
T  15820274 tgggtgagtgaaaatcattgagtgtcttgttctttgg 15820310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 20762547 - 20762687
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  20762547 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 20762643  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||| ||||||||||||| ||||||||||||    
T  20762644 agtgaaaatcattgagtatcttgttcattggtgagattgagaaa 20762687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 40122496 - 40122355
Alignment:
Q  37 ttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacctt 136  Q
    |||| |||||| ||| | ||||||| |||||||||||||||| |||||||  |||||||| || ||| |||| || ||| |||||||| |||||||||||    
T  40122496 ttcaagagagaaaaacttgggaaatcaaaggaggtaactttatggttgaggatcattaattagagttatctt-ggattgggaaacatt-gtaaacacctt 40122399  T
Q  137 gggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||||| | |||| |||||| ||||||||||||| | |||||||    
T  40122398 gggtgagtaaaaatcattgaatgtcttgttcatttgtgagattg 40122355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 8551067 - 8550939
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| |||||||| |||| || ||| || || || |||||||| ||||| ||||||||| |||||||| |||||||| |||||| ||||    
T  8551067 gggaaatcaaaggagttaactttagggttaagggtctttgattagagttctctt-gggttaagaaacatt-gtaaacacattgggtgagtgaaaatcatt 8550970  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  8550969 gagtgtcttgttcatttgtgagattgggaaa 8550939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 23555564 - 23555422
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||| ||| | ||||||| |||||||||||||| | |||||||  || || || |  |||||||| |||||| |||||||| ||||||||||    
T  23555564 cttcaagagagaaaaacttgggaaatcaaaggaggtaacttcagggttgaggatctttgattaaagttctctt-gggttgggaaacatt-gtaaacacct 23555467  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    ||||||||||||||  |||||||||||| ||| |||| |||||||    
T  23555466 tgggtgaatgaaaattattgagtgtcttattctttggtgagattg 23555422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 13659616 - 13659488
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||||||||||   ||||||| ||| || || || |||||||| || |||||||||||| ||||||||||||||  | |||||| ||||    
T  13659616 gggaaatcaaaggaggtaacttgtgggttgagggtctttgattagagttctcttagg-ttgagaaacatt-gtaaacaccttggggtagtgaaaatcatt 13659519  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  13659518 gagtgtcttgttcatttgtgagattgggaaa 13659488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 28265779 - 28265706
Alignment:
Q  111 ggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  28265779 ggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggcgagattgggaaa 28265706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 37282920 - 37282847
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattga 181  Q
    ||||||||  |||| ||| |||||||||||  ||| |||||| |||||||||||||||||||||||||||||||    
T  37282920 ttgggttggaaaacttttttaaacaccttgtatgagtgaaaaccattgagtgtcttgttcattggagagattga 37282847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 44646999 - 44646936
Alignment:
Q  122 atttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||| || |||| ||| ||||||  ||||||||||||||||||||||||||||||||||    
T  44646999 atttgtaaatactttggatgagtgaaaattattgagtgtcttgttcattggagagattgagaaa 44646936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 29274719 - 29274575
Alignment:
Q  268 tagaactcaattaaaattgatgttcttcgtacatagaaacattaaggaaaagatagaagaagactaagtcataagact-aagccattactcgactagaga 366  Q
    |||||| ||||||||| || | || || ||||||| ||| || ||| ||||||||||||||| |||||||  | |||| || ||||||||| ||||||||    
T  29274719 tagaacccaattaaaactggtatttttagtacata-aaagataaagaaaaagatagaagaaggctaagtccaaggacttaaaccattactctactagaga 29274621  T
Q  367 gtaccaaagg-gagagaggagagacttcaatcatttttcttcatacc 412  Q
    ||| |||||| | ||||||||||||||| |||||| || ||||||||    
T  29274620 gtatcaaaggagggagaggagagacttc-atcattatttttcatacc 29274575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 193555 - 193627
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| |  |||||| ||| |||||||||||||||||| ||||||||||||    
T  193555 gttgggaaacaattgtaaacaccttgggagggtgaaaatcat-gagtgtcttgttcattggtgagattgagaaa 193627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 11348642 - 11348714
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  11348642 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 11348714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 19754438 - 19754510
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||||| |||||||||||| | || |||||| ||| |||||||||||||||||| ||||||||||||    
T  19754438 gttgggaaacattcgtaaacaccttgagagagtgaaaatcat-gagtgtcttgttcattggtgagattgagaaa 19754510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 29136191 - 29136263
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  29136191 gttgtgaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 29136263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 37033297 - 37033225
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  37033297 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 37033225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 37879135 - 37879063
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  37879135 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 37879063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 13547308 - 13547241
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  13547308 gaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 13547241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 13549219 - 13549152
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  13549219 gaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 13549152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 16455585 - 16455633
Alignment:
Q  132 accttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  16455585 accttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattg 16455633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 37168241 - 37168313
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||| | || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  37168241 gttgggaaacaattgtaaacaccttgagagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 37168313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 42298199 - 42298127
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || | |||| ||| |||||||||||||||||| ||||||| ||||    
T  42298199 gttgtgaaacaattgtaaacaccttgggagagtaaaaatcat-gagtgtcttgttcattggtgagattgggaaa 42298127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 47115115 - 47115187
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| ||||||||| |||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  47115115 gttgggaaacaattgtaaacatcttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 47115187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 777099 - 777171
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt 108  Q
    ||||| |||||||||| | ||||||| |||||||||||||||| ||||||  ||| || || |||||||||||    
T  777099 cttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgatggtctttgattagggttctctt 777171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 41360872 - 41360930
Alignment:
Q  126 gtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||| ||||||||| ||||||  ||||||||||||||||||||| ||||||| ||||    
T  41360872 gtaaacatcttgggtgagtgaaaat-attgagtgtcttgttcattggtgagattgggaaa 41360930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 28265865 - 28265811
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtc 90  Q
    ||||| |||||||||| | ||||||| |||||||||||||||| ||||||| |||    
T  28265865 cttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtc 28265811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 6808389 - 6808446
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcat 169  Q
    ||||||||||||| | |||||| ||||| || ||||||  ||||||||||||||||||    
T  6808389 gttgagaaacattgggaaacactttgggagagtgaaaattattgagtgtcttgttcat 6808446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 31925919 - 31925867
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagaga 177  Q
    |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||    
T  31925919 ttgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgaga 31925867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 34603519 - 34603588
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattga 181  Q
    |||| |||||| ||||||||||||||||  | ||||||    ||||||||||||||||||| ||||||||    
T  34603519 gttgggaaacaattgtaaacaccttgggaaagtgaaaattcatgagtgtcttgttcattggtgagattga 34603588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 19752643 - 19752698
Alignment:
Q  126 gtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgag 182  Q
    |||||||||||| | || |||||| ||| |||||||||||||||||| |||||||||    
T  19752643 gtaaacaccttgagagagtgaaaatcat-gagtgtcttgttcattggtgagattgag 19752698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 30476676 - 30476618
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttca 168  Q
    |||||||| |||||||| ||||||||||||||||  |||||| |||||||| |||||||||    
T  30476676 ttgggttgggaaacatt-gtaaacaccttgggtgggtgaaaatcattgagt-tcttgttca 30476618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 48142917 - 48143058
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  48142917 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 48143014  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  48143015 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 48143058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 52467654 - 52467521
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||||||| | ||| ||| ||||||||||| |||| ||||||| ||| || || ||||||||||| |||||| |||||||||||||||||||    
T  52467654 cttcaagagagagaaactagggtaatcaaaggaggtaattttagggttgagggtctttgattagggttctctt-gggttgggaaacatttgtaaacacct 52467556  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcatt 170  Q
    ||||||| |||||| ||||||||||||||||||||    
T  52467555 tgggtgagtgaaaatcattgagtgtcttgttcatt 52467521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 24968979 - 24969123
Alignment:
Q  35 acttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacc 134  Q
    |||||| |||||| ||| | ||||||| |||||||||||||||||||||||  ||| || || || |||||||| |||||| ||||||||||||||||||    
T  24968979 acttcaagagagaaaaacttgggaaatcaaaggaggtaactttaaggttgacggtctttgattagagttctctt-gggttgggaaacatttgtaaacacc 24969077  T
Q  135 ttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||||||| |||||| ||||||| ||||||||| |||| |||||||    
T  24969078 ttgggtgagtgaaaatcattgagagtcttgttctttggtgagattg 24969123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 5429554 - 5429695
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| ||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  5429554 gagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 5429651  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  5429652 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 5429695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 52082950 - 52082809
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  52082950 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 52082853  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||| ||||||||||||||| ||||||| ||||    
T  52082852 agtgaaaatcattgactgtcttgttcattggtgagattgggaaa 52082809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 52095655 - 52095514
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| | | || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  52095655 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggactttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 52095558  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  52095557 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 52095514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 54200199 - 54200058
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| |  |||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| |||||||| |||||||    
T  54200199 gagagagaaacttaggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacacattgggtg 54200102  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  54200101 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 54200058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 5208136 - 5207999
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||||| || |||| ||||||||||||| || ||||| | ||| ||  ||||||||||||| || ||| |||||||||||||||||||||||||    
T  5208136 gagagagaaatttggaaaatcaaaggaggtaactatagggttgcgggtctttggtgagggttctctt-ggattgggaaacatttgtaaacaccttgggtg 5208038  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||| |||| |||||||||||||| |||||    
T  5208037 agtgaaaatcatttagtgacttgttcattggagtgattg 5207999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 12739843 - 12739702
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||| ||||    
T  12739843 gagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttaggtg 12739746  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | || ||| |||||||||||||||||||||| ||||||| ||||    
T  12739745 agtggaaatcattgagtgtcttgttcattggtgagattgggaaa 12739702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 12748049 - 12747908
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||| ||||    
T  12748049 gagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttaggtg 12747952  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | || ||| |||||||||||||||||||||| ||||||| ||||    
T  12747951 agtggaaatcattgagtgtcttgttcattggtgagattgggaaa 12747908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 26175929 - 26175788
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||||||||||||  |||||| ||| || || |  ||||| || |||||| |||||||| ||||||||||||||||    
T  26175929 gagagagaaacttgggaaatcaaaggaggtaactttagagttgagggtctttgattaaagttctgtt-gggttgggaaacatt-gtaaacaccttgggtg 26175832  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  26175831 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 26175788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 29254369 - 29254510
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||| |||||||| ||||||  ||| || |  || |||||||| |||||| |||||||| |||||||| |||||||    
T  29254369 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgagtagagttctctt-gggttgggaaacatt-gtaaacacattgggtg 29254466  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||    
T  29254467 aatgaaaatcattgagtgtcttgttcattggtgagattgggaaa 29254510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 47038691 - 47038566
Alignment:
Q  53 tggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaaca 152  Q
    ||||||||| ||||||| |||||||| ||||||| ||| || || || |||||||| |||||| ||||||||  |||||||||||||||| |||||| ||    
T  47038691 tggggaaatcaaaggagttaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatta-taaacaccttgggtgagtgaaaatca 47038594  T
Q  153 ttgagtgtcttgttcattggagagattg 180  Q
    |||||||||||||||||||| |||||||    
T  47038593 ttgagtgtcttgttcattggtgagattg 47038566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 56178929 - 56178789
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||  ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  56178929 gagagagaaacttgggaaatcaaaggaggtaactttagggttgaaggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 56178833  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  56178832 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 56178789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 34570706 - 34570566
Alignment:
Q  43 agagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtga 142  Q
    ||||||||| | ||||||| |||||||||| ||||| ||||||| ||| || || || |||||||| |||||| |||||||| | ||||| |||||||||    
T  34570706 agagagaaacttgggaaatcaaaggaggtagctttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gaaaacatcttgggtga 34570609  T
Q  143 atgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
     |||||| |||||||||||||||||||||| ||||||| ||||    
T  34570608 gtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 34570566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 5871708 - 5871831
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||  | ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  5871708 gggaaatcaaaggaggtaactttagggttatgggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 5871805  T
Q  155 gagtgtcttgttcattggagagattg 180  Q
    |||||||||||||||||| |||||||    
T  5871806 gagtgtcttgttcattggtgagattg 5871831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 23407744 - 23407669
Alignment:
Q  187 tgtaatgattcctaaaatttataatggaataaaaatgataattgtgaattgattgttaaatgaaaggtaaaattgat 263  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  23407744 tgtaatggttcctaaaattgataatggaataaaa-tgataattgtgaattgattgtgaaatgaaaggtaaaattgat 23407669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 13009711 - 13009583
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||| |||||||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  13009711 gggaaatcaaatgaggtaactttagggttaagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 13009614  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  13009613 gagtgtcttgttcatttgtgagattgtgaaa 13009583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 63 - 185
Target Start/End: Complemental strand, 6542454 - 6542333
Alignment:
Q  63 aaaggaggtaactttaaggttgagagtcatt--aatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgt 160  Q
    |||||||||||||||| ||||||| ||| ||  ||||||| ||||||| |||||| |||||||| ||||||||||||||||| ||||||  |||||||||    
T  6542454 aaaggaggtaactttagggttgagtgtctttgtaatgagg-ttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaattattgagtgt 6542358  T
Q  161 cttgttcattggagagattgagaaa 185  Q
    |||||||||||| ||||||| ||||    
T  6542357 cttgttcattggggagattgggaaa 6542333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 12745729 - 12745594
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||  ||||||||||||||||  |||||| ||| || || || |||||||| || ||| |||||| | ||||||||||||||||    
T  12745729 gagagagaaacttgggaaaaaaaaggaggtaactttagagttgagggtctttgattagagttctctt-ggtttgggaaacaat-gtaaacaccttgggtg 12745632  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    | |||||| |||||||||||||||||||||| ||||||    
T  12745631 agtgaaaatcattgagtgtcttgttcattggcgagatt 12745594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 37740501 - 37740635
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||||||| |||| ||||||| ||| || || || |||||| |||||||| |||||| ||||||||||||| ||||    
T  37740501 gagagagaaacttgggaaatcaaaggaggtaagtttagggttgagggtctttgattagagttctc-ttgggttgggaaaca-ttgtaaacacctt-ggtg 37740597  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    | |||||| || ||||||||||||||||||| ||||||    
T  37740598 agtgaaaatcactgagtgtcttgttcattggtgagatt 37740635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 9927750 - 9927610
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |  |||||| |||||||| |||||| ||||||||||||| ||||    
T  9927750 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctc-ttgggttgggaaaca-ttgtaaacacctt-ggtg 9927654  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| || |||||||||| |||||||| ||||||| ||||    
T  9927653 agtgaaaatcactgagtgtcttattcattggtgagattgggaaa 9927610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 48893879 - 48893794
Alignment:
Q  100 ggttctcttt-gggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||| |||||  |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  48893879 ggttctctttagggtttggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaa 48893794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 37229951 - 37229874
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||  ||||||||||||||||||||||||| |||||| || ||||||||||||||||||| ||||||| ||||    
T  37229951 ttgggttggaaaacatttgtaaacaccttgggtgagtgaaaatcaatgagtgtcttgttcattggtgagattgggaaa 37229874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 53345085 - 53345233
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||| | ||||| | ||||||||| ||||||||||||||||||||| |  |   |||| |||||||| |||| |||||| |||||| ||||| |    
T  53345085 cttcaagagaaaaaaatttgagaaattaaatgaggtaactttaaggttgagaattttcggtgagagttctcttggggt-gagaaaaatttgttaacactt 53345183  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |  |||| |||||| |||||||||||||||| || |||||||||||||||    
T  53345184 taagtgagtgaaaatcattgagtgtcttgtttatcggagagattgagaaa 53345233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 36994400 - 36994540
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | || |||| |||||||||||||||  ||||||| ||| || || || |||||||| |  |||  ||||||| ||||||||||||||||    
T  36994400 gagagagaaacttggaaaatcaaaggaggtaactttt-ggttgagggtctttgattagagttctctt-gatttggcaaacatt-gtaaacaccttgggtg 36994496  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  36994497 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 36994540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 21704127 - 21704034
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaa 130  Q
    ||||| |||||||||| | | ||||| ||| ||||||||||||||||||| |||| ||  ||||||||||| |||||||||||||||||||||||    
T  21704127 cttcaagagagagaaacttgagaaatcaaatgaggtaactttaaggttgaaagtctttggtgagggttctc-ttgggttgagaaacatttgtaaa 21704034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 31474105 - 31474166
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  31474105 ttgtaaacactttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaa 31474166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 51337019 - 51337080
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||||||    
T  51337019 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcctgttcattggtgagattgagaaa 51337080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 30000098 - 29999958
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||  ||||||| |||| || ||| || || || |||||||| || ||| |||||||| ||||||||||||| ||    
T  30000098 gagagagaaacttgggaaatcaaaggagacaactttagggtttagggtctttgattagagttctcttgggtttg-gaaacatt-gtaaacaccttgg-tg 30000002  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| | |||||||||||||||||||| ||||||| ||||    
T  30000001 agtgaaaatcgttgagtgtcttgttcattggtgagattgggaaa 29999958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 55085584 - 55085521
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||||| ||||||||||||||||||| |||||| |||||| ||||||||||||||| |||||||    
T  55085584 gaaacaattgtaaacaccttgggtgagtgaaaatcattgactgtcttgttcattggtgagattg 55085521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 29056301 - 29056374
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||||||| ||||||||||||||| | |||| |||||||||| ||||||||| ||||||||| ||||    
T  29056301 gttgggaaacatttggaaacaccttgggtgagtaaaaatcattgagtgttttgttcattagagagattgggaaa 29056374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 36463602 - 36463541
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||| ||||||| ||||    
T  36463602 ttgtaaacaccttgggtgagtgaaattcattgagtgtcttgttcattggtgagattgggaaa 36463541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 40632389 - 40632461
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||| |||||||||||||||| || |||||| || ||||||||||||||||||| ||||||| ||||    
T  40632389 gttgagaaacaattgtaaacaccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgggaaa 40632461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 48142651 - 48142551
Alignment:
Q  63 aaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtct 162  Q
    |||||||||||||||| ||||||  ||| || || ||||||||||| | |||| ||||||||| ||||||| | |||||| |||||| ||||||||||||    
T  48142651 aaaggaggtaactttagggttgatggtctttgattagggttctctt-gagttgggaaacatttttaaacacttcgggtgagtgaaaatcattgagtgtct 48142553  T
Q  163 tg 164  Q
    ||    
T  48142552 tg 48142551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 4587899 - 4587974
Alignment:
Q  109 tgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||| |||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||| || |||| ||||    
T  4587899 tgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcatgttcattggtgaaattgggaaa 4587974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 45687495 - 45687335
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctct------------ttgggttgagaaacat 123  Q
    ||||| |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || ||||||||||            |||||||| ||||||     
T  45687495 cttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttgaggggttctcttgggttgggaaaca- 45687397  T
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||||||| |||||    |||| ||||||||||||||| ||||||| ||||    
T  45687396 ttgtaaacaccttgggtgagtgaaattttttgattgtcttgttcattggtgagattgggaaa 45687335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 39594041 - 39593958
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgag-ggttctctttgggttgagaaacatttgtaaacaccttg 137  Q
    ||||||| ||| |||||||||||||||||| ||||| || ||||  ||||||||| || | |||||||||||||||||||||||    
T  39594041 gggaaatcaaatgaggtaactttaaggttgggagtctttgatgataggttctcttgggttggagaaacatttgtaaacaccttg 39593958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 412
Target Start/End: Complemental strand, 4578541 - 4578364
Alignment:
Q  233 aattgattgttaaatgaaaggtaaaattgatagattagaactcaattaaaattgatgttcttcgtacatagaaacattaa-ggaaaagatagaagaagac 331  Q
    ||||||||||||||| |||  |||||||||| ||| ||||| |||||||| ||| ||||| | ||| ||| ||  |  || |||||||||  ||||||||    
T  4578541 aattgattgttaaatcaaaa-taaaattgattgatgagaacacaattaaagttggtgttcgtagtaaata-aatgagaaatggaaaagattaaagaagac 4578444  T
Q  332 taagtcataagact-aagccattactcgactagagagtaccaaagggagagaggagagacttcaatcatttttcttcatacc 412  Q
    ||  || ||||||| |||| ||| ||| ||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||    
T  4578443 tatctc-taagacttaagctattgctctactagagagtaccaaagagggagaggagagacttc-atcattttttttcatacc 4578364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 5349845 - 5349905
Alignment:
Q  107 tttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttca 168  Q
    ||||||||| |||||||||||||||||||||| ||| |||||| | ||||||||||||||||    
T  5349845 tttgggttg-gaaacatttgtaaacaccttggatgattgaaaatctttgagtgtcttgttca 5349905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 23406698 - 23406633
Alignment:
Q  345 taagccattactcgactagagagtaccaaagggagagaggagagacttcaatcatttttcttcata 410  Q
    |||||||||||||    |||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  23406698 taagccattactctcaaagagagtaccaaagagagagaggagagactttcatcatttttcttcata 23406633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 23407678 - 23407625
Alignment:
Q  279 taaaattgatgttcttcgtacatagaaacattaaggaaaagatagaagaagact 332  Q
    |||||||||||||||| ||||||||||  ||||| |||||||||||||||||||    
T  23407678 taaaattgatgttcttggtacatagaactattaaagaaaagatagaagaagact 23407625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 54882964 - 54883036
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  54882964 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 54883036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 3913408 - 3913464
Alignment:
Q  129 aacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||| |||||| |||||||||||||||||||| | ||||||| ||||    
T  3913408 aacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaa 3913464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 5370379 - 5370244
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| |||||||  ||||||| |||| || ||| || || |  |||||||| ||| || |||||||| |||||||| |||| ||    
T  5370379 gagagagaaacttgagaaatcaaaggagacaactttagggtttagggtctttgattatagttctctt-gggctgggaaacatt-gtaaacactttgg-tg 5370283  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||||||||||||||||| |||||||    
T  5370282 agtgaaaatcattgagtgtcttgttcattggtgagattg 5370244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 6677363 - 6677466
Alignment:
Q  63 aaaggaggtaactttaaggttgagagtcattaatgaggg-ttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtc 161  Q
    |||||||||||||||| ||||||| ||| ||  | |||| ||||||| |||||| ||||||||||||||||| |||| ||| ||||| | ||||||| ||    
T  6677363 aaaggaggtaactttagggttgagtgtctttgttcaggggttctctt-gggttgggaaacatttgtaaacacattggatgagtgaaata-attgagtctc 6677460  T
Q  162 ttgttc 167  Q
    ||||||    
T  6677461 ttgttc 6677466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 21688192 - 21688264
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| || ||||||||||||| || |||||| ||| ||||||||||||||| || ||||||||||||    
T  21688192 gttgggaaacaattctaaacaccttgggggagtgaaaatcat-gagtgtcttgttcatcggtgagattgagaaa 21688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 46703443 - 46703516
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || ||||||    ||||||||||||||||||| ||||||| ||||    
T  46703443 gttgggaaacaattgtaaacaccttgggagagtgaaaattcatgagtgtcttgttcattggtgagattgggaaa 46703516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 12119481 - 12119549
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||| |||||| ||||||| |||||||| || |||||| || |||||||||||||||| || |||||||    
T  12119481 gttgggaaacaattgtaaataccttgggagagtgaaaatcaatgagtgtcttgttcataggtgagattg 12119549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 37755223 - 37755112
Alignment:
Q  37 ttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgag-ggttctctttgggttgagaaacatttgtaaacacct 135  Q
    |||| |||||||||| | || |||| |||||||||||||||| | ||||||||| ||  |||| ||||||| |||| ||  |||| ||||||||||||||    
T  37755223 ttcaagagagagaaacttggaaaatcaaaggaggtaactttaggattgagagtctttggtgagaggttctc-ttggattatgaaatatttgtaaacacct 37755125  T
Q  136 tgggtgaatgaaa 148  Q
    | ||||| |||||    
T  37755124 taggtgagtgaaa 37755112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 50674064 - 50673998
Alignment:
Q  118 aaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||| |||||||||||||||| || |||||| ||| ||||||| |||||||| | ||||||||||||    
T  50674064 aaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcgtgttcatttgtgagattgagaaa 50673998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 52093957 - 52093891
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt 108  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || ||||||||    
T  52093957 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt 52093891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 2209669 - 2209729
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| || |||||| ||| |||||||||||||||||  ||||||| ||||    
T  2209669 ttgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattgttgagattgggaaa 2209729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 6655900 - 6655968
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattga 181  Q
    |||| |||||| |||||||||||||||| || |||||| || ||||||||||||||| | | ||||||||    
T  6655900 gttgggaaacaattgtaaacaccttgggagagtgaaaatca-tgagtgtcttgttcacttgtgagattga 6655968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 35662384 - 35662453
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattga 181  Q
    |||| |||||| |||||||||||||| | |  |||||||   ||||||||||||||||||| ||||||||    
T  35662384 gttgggaaacaattgtaaacaccttgagagtgtgaaaaatcatgagtgtcttgttcattggtgagattga 35662453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 49272660 - 49272623
Alignment:
Q  371 caaagggagagaggagagacttcaatcatttttcttca 408  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  49272660 caaagggagagaggagagactttcatcatttttcttca 49272623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 13992513 - 13992459
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttg 164  Q
    |||||||| |||||||| ||||||||||||| ||| |||||| ||||||||||||||    
T  13992513 ttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttg 13992459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 33089837 - 33089893
Alignment:
Q  128 aaacaccttgggtgaatgaaaaacattgagtgtcttgttcattgg-agagattgaga 183  Q
    |||||||||||  || |||||| ||||||||||||||||||| || |||||||||||    
T  33089837 aaacaccttggaagagtgaaaatcattgagtgtcttgttcatgggaagagattgaga 33089893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 46147654 - 46147582
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt 108  Q
    ||||| |||||| ||| | ||||||| |||||||||||||||| ||||||| ||| || || |||||| ||||    
T  46147654 cttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttttctt 46147582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 5236749 - 5236608
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | |||||||  ||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||    
T  5236749 gagagagaaacttgggaaatcgaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtg 5236652  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  5236651 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 5236608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 9666767 - 9666624
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||||| | | ||||||| ||| |||||||||||| ||||||| ||| || || |||||||||||  | ||| |||||||||||||||||||    
T  9666767 cttcaagagagagacactagggaaatcaaatgaggtaactttagggttgagggtctttgattagggttctcttcag-ttgggaaacatttgtaaacacct 9666669  T
Q  136 tgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    ||||||| |||||| |||||||||||||||||||| | |||||||    
T  9666668 tgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattg 9666624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 39153641 - 39153529
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||||||| |||||||||||||||||||||||| ||||    
T  39153641 gggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgaatgaaaatcatt 39153544  T
Q  155 gagtgtcttgttcat 169  Q
    |||||||||||||||    
T  39153543 gagtgtcttgttcat 39153529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 40734389 - 40734514
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| ||||||| |||||||| ||||||| ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| |||||||    
T  40734389 aaatcaaaggagataactttagggttgagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgag 40734486  T
Q  158 tgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||| ||||||| ||||    
T  40734487 tgtcttgttcattggtgagattgggaaa 40734514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 44700715 - 44700630
Alignment:
Q  99 gggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||| |||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  44700715 gggttctctt-gggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 44700630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 53921796 - 53921660
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||| ||| | ||||||| ||| |||||||||||| ||||||||||| || || |||||| |||| ||||||  ||||||| ||||| ||||||||||    
T  53921796 gagagaaaaacttgggaaatcaaatgaggtaactttagggttgagagtctttgattagggttttctt-gggttggaaaacatt-gtaaaaaccttgggtg 53921699  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||||||||||||||||| |||||||    
T  53921698 agtgaaaatcattgagtgtcttgttcattggtgagattg 53921660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 29196616 - 29196539
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  29196616 ttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 29196539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 7762141 - 7762281
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||||| |||||| |||| ||| || |||||||||| ||    
T  7762141 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gggttgggaaatatt-gtgaacaccttgg-tg 7762237  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| ||||||||||||| |||||||| ||||||||||||    
T  7762238 agtgaaaatcattgagtgtcttattcattggtgagattgagaaa 7762281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 40735258 - 40735399
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |  |||||||| |||||  |||||||| |||||||||||||       
T  40735258 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctctt-gggttaggaaacatt-gtaaacaccttggaaa 40735355  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||||||||    
T  40735356 agtgaaaatcattgagtgtcttgttcattggtgagattgagaaa 40735399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 32890999 - 32891119
Alignment:
Q  63 aaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtct 162  Q
    |||||||||||||||| ||||||| ||| || || ||||||||||| |||| | |||||||| ||||||||||||||||| | |||| ||||||||||||    
T  32890999 aaaggaggtaactttagggttgagggtctttgattagggttctcttggggtgg-gaaacatt-gtaaacaccttgggtgagtaaaaatcattgagtgtct 32891096  T
Q  163 tgttcattggagagattgagaaa 185  Q
    ||||| | || ||||||||||||    
T  32891097 tgttcttcggtgagattgagaaa 32891119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 51398689 - 51398825
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||| ||||| | ||||||| |||||||||||||||| ||||||||||| || || || ||| |||| |||||| |||| ||| ||||||||||||| ||    
T  51398689 gagatagaaacttgggaaatcaaaggaggtaactttagggttgagagtctttgattagagttttctt-gggttgggaaatatt-gtaaacaccttggatg 51398786  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||||||||||||||||  |||||||    
T  51398787 agtgaaaatcattgagtgtcttgttcattgatgagattg 51398825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 5373093 - 5373247
Alignment:
Q  37 ttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct- 135  Q
    |||| |||||||||| | |  |||| |||||||||||||||||||||||||||| ||  ||| ||||||| |||||||| |||||||| ||||||||||     
T  5373093 ttcaagagagagaaacttgaaaaatcaaaggaggtaactttaaggttgagagtctttggtgaaggttctc-ttgggttgggaaacattggtaaacacctt 5373191  T
Q  136 ------tgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
          |||||||  ||||| ||||||||||||||||||||| |||||||| ||||    
T  5373192 attgggtgggtgagggaaaatcattgagtgtcttgttcattgaagagattgggaaa 5373247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 29810756 - 29810878
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||||||| |||| ||||||| ||| || || || ||||| ||||||||| |||||||| ||||||||||||||||| |||||| ||||    
T  29810756 gggaaatcaaaggaggtaattttagggttgagggtctttgattagagttct-tttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 29810853  T
Q  155 gagtgtcttgttcattggagagatt 179  Q
    || |||||| |||||||| ||||||    
T  29810854 gaatgtcttattcattggtgagatt 29810878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 5260616 - 5260476
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||| ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  5260616 gagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 5260520  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||| ||||||| ||||||| ||||    
T  5260519 agtgaaaatcattgagtgtcttggtcattggtgagattgggaaa 5260476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 9581171 - 9581284
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| |||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  9581171 gggaaatcaaaggagttaactttagggttaagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 9581268  T
Q  155 gagtgtcttgttcatt 170  Q
    ||||||||||||||||    
T  9581269 gagtgtcttgttcatt 9581284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 22835279 - 22835154
Alignment:
Q  58 aaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgag 157  Q
    |||| |||||||||||||||| ||||||| ||| || || || |||||||| | |||| |||||||| |||| |||||||||||| |||||| |||||||    
T  22835279 aaatcaaaggaggtaactttagggttgagggtctttgattagagttctctt-gtgttgggaaacatt-gtaatcaccttgggtgagtgaaaatcattgag 22835182  T
Q  158 tgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||| | ||||||| ||||    
T  22835181 tgtcttgttcatttgtgagattgggaaa 22835154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 45095040 - 45095180
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||| |||| ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  45095040 gagagagaaacttgggaaatcaaaagaggcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 45095136  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  45095137 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 45095180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 19684169 - 19684041
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| |||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  19684169 gggaaatcaaaggagttaactttagggttaagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 19684072  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    || ||||||||||||| | ||||||| ||||    
T  19684071 gaatgtcttgttcatttgtgagattgggaaa 19684041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 7764343 - 7764475
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| ||||||||||||||||  |||||| ||| || || ||  ||||||| |||||  |||||||| ||||||||||||| ||    
T  7764343 gagagagaaacttgggaaatcaaaggaggtaactttagagttgagggtctttgattagatttctctt-gggttaggaaacatt-gtaaacaccttgg-tg 7764439  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagaga 177  Q
    | |||||| |||||||||||||||||||||| ||||    
T  7764440 agtgaaaatcattgagtgtcttgttcattggtgaga 7764475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 44331485 - 44331555
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagatt 179  Q
    |||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  44331485 ttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagatt 44331555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 760735 - 760863
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| |||||||| |||| || ||| || || || |||||||| |||||| ||||||||  |||||||||||| ||| |||||| ||||    
T  760735 gggaaatcaaaggagttaactttagggttaagggtctttgattagagttctctt-gggttgggaaacatta-taaacaccttggatgagtgaaaatcatt 760832  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  760833 gagtgtcttgttcatttgtgagattgggaaa 760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 16498918 - 16499046
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||||||||||   ||||||| ||| || || || |||||||| || |||||||||||| ||||||||||||||  | |||||| ||||    
T  16498918 gggaaatcaaaggaggtaacttgtgggttgagggtctttgattagagttctcttagg-ttgagaaacatt-gtaaacaccttggggtagtgaaaatcatt 16499015  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  16499016 gagtgtcttgttcatttgtgagattgggaaa 16499046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 26386761 - 26386633
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| |||||||||||||||| ||||||||||| || || || |||||||| || ||| ||||||   ||||| || |||||||| |||||| ||||    
T  26386761 gggaaatcaaaggaggtaactttagggttgagagtctttgattagagttctcttagg-ttgggaaacagg-gtaaatactttgggtgagtgaaaatcatt 26386664  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  26386663 gagtgtcttgttcatttgtgagattgggaaa 26386633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 29682247 - 29682375
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||| ||| |||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||||||| |||||| ||||    
T  29682247 gggaaatcaaaggagttaaatttagggttaagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatt 29682344  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||| ||| | ||||||| ||||    
T  29682345 gagtgtcttgtttatttgtgagattgggaaa 29682375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 29812938 - 29813074
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||| ||| || || |  |||||| |||||||| ||| || |||||||||| |||||||    
T  29812938 gagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctc-ttgggttgggaagca-ttgtaaacacattgggtg 29813035  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| ||||||| | |||||| ||||| |||||||    
T  29813036 agtgaaaatcattgaggggcttgttaattggtgagattg 29813074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 31314377 - 31314461
Alignment:
Q  99 gggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||| |||||| |||||||| |||||||| |||||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  31314377 gggttctctt-gggttgggaaacatt-gtaaacactttgggtgagtgaaaatcattgagtgtcttgttcataggtgagattgagaaa 31314461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 5258437 - 5258297
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | | ||||| |||||  | ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  5258437 gagagagaaacttgagaaatcaaagggagaaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 5258341  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||||||||||||||||| ||||||| ||||    
T  5258340 agtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 5258297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 37408334 - 37408474
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||||| ||||||| |||| |  ||| || || || |||||||| |||||| |||||||| ||||||||||| | ||    
T  37408334 gagagagaaacttgggaaatcaaaggaggcaactttagggtttatggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttag-tg 37408430  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | ||||||  ||||||||||||||||||||| ||||||| ||||    
T  37408431 agtgaaaattattgagtgtcttgttcattggtgagattgggaaa 37408474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 46860416 - 46860490
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaa-cattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||| |||||||||||||||| || ||||||  || ||||||||||||||||||| ||||||||||||    
T  46860416 gttgagaaacaattgtaaacaccttgggagagtgaaaattcaatgagtgtcttgttcattggtgagattgagaaa 46860490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 5434102 - 5434035
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||| |||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||||    
T  5434102 gttgggaaacaattgtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggtgagattg 5434035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 181
Target Start/End: Complemental strand, 8166757 - 8166612
Alignment:
Q  37 ttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgag-ggttctctttgggttgagaaacatttgtaaacacct 135  Q
    |||| |||||||||||| ||||||| ||| |||||||||||| ||||||| ||  ||  |||  ||||||||| | ||||| |||||||||||||||| |    
T  8166757 ttcaagagagagaaatttgggaaataaaatgaggtaactttagggttgagggtt-ttcttgaaaggttctctt-gagttgaaaaacatttgtaaacacat 8166660  T
Q  136 tgggtgaatgaaaaacattga--gtgtcttgttcattggagagattga 181  Q
    ||||||  |||||| ||||||  ||||||||||||| | |||||||||    
T  8166659 tgggtgggtgaaaatcattgagtgtgtcttgttcatggaagagattga 8166612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 4569901 - 4569968
Alignment:
Q  118 aaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||| ||||||||||||||||||| |||||| |||||||||| |||||| |||| ||||||| ||||    
T  4569901 aaacaattgtaaacaccttgggtgagtgaaaatcattgagtgttttgttctttggtgagattgggaaa 4569968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 32744725 - 32744606
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacacct 135  Q
    ||||| |||||| ||| | ||||||| |||||||||||||||| ||||||| ||| || || || |||||| |||||||| |||||| |||||||||| |    
T  32744725 cttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctc-ttgggttgggaaaca-ttgtaaacacat 32744628  T
Q  136 tgggtgaatgaaaaacattgagt 158  Q
    | ||||| |||||| ||||||||    
T  32744627 t-ggtgagtgaaaatcattgagt 32744606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 2075285 - 2075209
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| ||||||||| |||||||||||  ||| |||||| |||||||||||||||||||||| || |||| ||||    
T  2075285 ttgggttgggaaacatttataaacaccttgc-tgagtgaaaatcattgagtgtcttgttcattggtgatattgggaaa 2075209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 23392137 - 23392061
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||| ||||||||||||||||| |||||| |||| |||||||| |||||||| ||| ||| ||||    
T  23392137 ttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatttagtgtctttttcattggtgagtttgggaaa 23392061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 392
Target Start/End: Original strand, 32756502 - 32756569
Alignment:
Q  323 gaagaagactaagtcataagactaagccattactcgactagagagtaccaaagggagagaggagagactt 392  Q
    ||||||||| ||||| ||||||| ||||||||||| || | |||||||||||||||||||||||||||||    
T  32756502 gaagaagaccaagtc-taagacttagccattactctacca-agagtaccaaagggagagaggagagactt 32756569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 54593648 - 54593720
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  54593648 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 54593720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 9636420 - 9636284
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctct-ttgggttgagaaacatttgtaaacaccttgggt 140  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || || |||| |||||||| |||| ||| ||||||||||||| |    
T  9636420 gagagagaaacttgggaaatcaaaggaagaaactttagggtttagggtctttgattagagt-ctctcttgggttgggaaatatt-gtaaacaccttgg-t 9636324  T
Q  141 gaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    || |||||| |||||||||||||| ||||||| |||||||    
T  9636323 gagtgaaaatcattgagtgtcttggtcattggtgagattg 9636284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 23410542 - 23410496
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcatt 170  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||    
T  23410542 ttgtaaacaccttgagtgagtgaaaatcattgagtgtcttgttcatt 23410496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 46506095 - 46506041
Alignment:
Q  340 aagactaagccattactcgactagagagtaccaaagggagagaggagagacttca 394  Q
    ||||||||| |||||||| ||||| ||||||| |||| |||||||||||||||||    
T  46506095 aagactaagtcattactctactagggagtacccaaggaagagaggagagacttca 46506041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 339
Target Start/End: Complemental strand, 46506171 - 46506083
Alignment:
Q  249 aaaggtaaaattgatagattagaactcaattaaaattgatgttcttcgtacatagaaacattaaggaaaagatagaagaagactaagtcat 339  Q
    |||| ||||||||||||||||||| |||||||||| | |||||||  |||||| |||| |  |||| ||||||| ||||||||||||||||    
T  46506171 aaagataaaattgatagattagaaatcaattaaaacttatgttctaagtacat-gaaagagaaagg-aaagatacaagaagactaagtcat 46506083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 6095823 - 6095751
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| || |||||||||| |||||||| ||||||| ||||    
T  6095823 gttgggaaacaattgtaaacaccttgggagagtgaaaatca-tgagtgtcttattcattggtgagattgggaaa 6095751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 23198165 - 23198091
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||| ||||||||||||| ||| |||||| ||||||||||||||||| |||| ||||||| ||||    
T  23198165 ttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttc-ttggtgagattgggaaa 23198091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 23200364 - 23200290
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||| |||||||| ||||||||||||| ||| |||||| ||||||||||||||||| |||| ||||||| ||||    
T  23200364 ttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttc-ttggtgagattgggaaa 23200290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 31340425 - 31340353
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||||||||| || |||||| || ||||||| ||||||||||| ||||||| ||||    
T  31340425 gttgggaaacaattgtaaacaccttgggagagtgaaaatca-tgagtgttttgttcattggtgagattgggaaa 31340353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 43402014 - 43401954
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  43402014 ttgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 43401954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 43403969 - 43403897
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||| ||||| || |||||| ||| |||||||||||||||||| ||||||| ||||    
T  43403969 gttgggaaacaattgtaaacactttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgggaaa 43403897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 46173315 - 46173369
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattgg 172  Q
    |||||| |||||||||||||||| || |||||| || |||||||||||||||||||    
T  46173315 gaaacaattgtaaacaccttgggagagtgaaaatca-tgagtgtcttgttcattgg 46173369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 35138915 - 35138857
Alignment:
Q  128 aaacaccttgggtgaatgaaaaacattgagtgtcttgttcattg-gagagattgagaaa 185  Q
    |||||||||||| || |||||| ||||||||||||||||||| |  |||||||||||||    
T  35138915 aaacaccttgggagagtgaaaatcattgagtgtcttgttcatggaaagagattgagaaa 35138857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 54740056 - 54739941
Alignment:
Q  57 gaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattga 156  Q
    |||||||||||||||||||||| |||||| |||| ||  ||| |||||| |||| |||| | |||||||| |||||| |||| | | |||| | ||||||    
T  54740056 gaaattaaaggaggtaactttagggttgaaagtctttggtga-ggttct-tttgtgttg-ggaacatttgcaaacacattggataagtgaatatcattga 54739960  T
Q  157 gtgtcttgttcattggaga 175  Q
     |||||| |||||||||||    
T  54739959 atgtcttattcattggaga 54739941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 30236069 - 30236141
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| ||||||||||||||||  | |||||| || ||||||||||||||||||  ||||||| ||||    
T  30236069 gttgggaaacaattgtaaacaccttgggatagtgaaaatca-tgagtgtcttgttcattgatgagattgggaaa 30236141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 41819736 - 41819675
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| || ||||||    ||||||||||||||||||| ||||||| ||||    
T  41819736 ttgtaaacaccttgggagagtgaaaattcatgagtgtcttgttcattggtgagattgggaaa 41819675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 44700791 - 44700742
Alignment:
Q  36 cttcaggagagagaaattggggaaattaaaggaggtaactttaaggttga 85  Q
    ||||| |||||||||| | ||||||| |||||||||||||||| ||||||    
T  44700791 cttcaagagagagaaactagggaaatcaaaggaggtaactttagggttga 44700742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 49199694 - 49199622
Alignment:
Q  112 gttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||| |||||| |||||||||| ||||| || |||||| ||| ||||||||||||| |||| ||||||| ||||    
T  49199694 gttgggaaacaattgtaaacactttgggagagtgaaaatcat-gagtgtcttgttcgttggtgagattgggaaa 49199622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 531270 - 531231
Alignment:
Q  372 aaagggagagaggagagacttcaatcatttttcttcatacc 412  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  531270 aaagggagagaggagagacttc-atcaattttcttcatacc 531231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 564225 - 564186
Alignment:
Q  372 aaagggagagaggagagacttcaatcatttttcttcatacc 412  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  564225 aaagggagagaggagagacttc-atcaattttcttcatacc 564186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 1314034 - 1313994
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaa 148  Q
    |||| ||| |||||||||||||||||||||||||| |||||    
T  1314034 ttggattgggaaacatttgtaaacaccttgggtgagtgaaa 1313994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 20708 - 20567
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| |  |||||| |||||||||||||||| ||||||| ||| || || || ||| |||| |||||| || ||||| ||||||||||||||||    
T  20708 gagagagaaactttggaaatcaaaggaggtaactttagggttgagggtctttgattagagttatctt-gggttgggagacatt-gtaaacaccttgggtg 20611  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| |||||||| | || |||||||| ||||||| ||||    
T  20610 agtgaaaatcattgagtttattattcattggtgagattgggaaa 20567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 149377 - 149249
Alignment:
Q  55 gggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacatt 154  Q
    ||||||| ||||||||||||||   ||||||| ||| || || || |||||||| || |||||||||||| ||||||||||||||  | |||||| ||||    
T  149377 gggaaatcaaaggaggtaacttgtgggttgagggtctttgattagagttctcttagg-ttgagaaacatt-gtaaacaccttggggtagtgaaaatcatt 149280  T
Q  155 gagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||||||||| | ||||||| ||||    
T  149279 gagtgtcttgttcatttgtgagattgggaaa 149249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 114535 - 114618
Alignment:
Q  99 gggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||||||| |||||| |||||||| ||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  114535 gggttctctt-gggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 114465 - 114531
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctt 108  Q
    |||||||||| | | ||||| |||||||||||||||| ||||||| ||| || || |||||||||||    
T  114465 gagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagggttctctt 114531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 792 - 931
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||  | ||||||| |||| || ||| || || || |||||||| |||||| |||||||| ||||||||||||| ||    
T  792 gagagagaaacttgggaaatcaaaggcagcaactttagggtttagggtctttgattagagttctctt-gggttgggaaacatt-gtaaacaccttgg-tg 888  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    | |||||| ||||||||||||||||| |||| ||||||| ||||    
T  889 agtgaaaatcattgagtgtcttgttc-ttggtgagattgggaaa 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 434408 - 434543
Alignment:
Q  42 gagagagaaattggggaaattaaaggaggtaactttaaggttgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtg 141  Q
    |||||||||| | ||||||| |||||| | ||||||| |||| || ||| || || || |||||||| ||||||  ||||||  ||||| ||||||| ||    
T  434408 gagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagttctctt-gggttggaaaacatg-gtaaataccttgg-tg 434504  T
Q  142 aatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    | |||||| |||||||||||||||||||||| |||||||    
T  434505 agtgaaaatcattgagtgtcttgttcattggtgagattg 434543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 11513 - 11573
Alignment:
Q  124 ttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  11513 ttgtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa 11573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 19191 - 19117
Alignment:
Q  83 tgagagtcattaatgagggttctctttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtg 159  Q
    |||||||| ||  ||||||||||||| |||||| |||||||||||||||| ||||||||| |||||| |||||||||    
T  19191 tgagagtctttggtgagggttctctt-gggttgggaaacatttgtaaaca-cttgggtgagtgaaaatcattgagtg 19117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 7276 - 7338
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||||| |||||||||||||||| || |||||| ||| |||||||||||||||||| |||||||    
T  7276 gaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg 7338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 394
Target Start/End: Original strand, 16415 - 16548
Alignment:
Q  258 attgatagattagaactcaattaaaattgatgttcttcgtacatagaaacattaaggaaaagatagaagaagactaagtcataagactaagccattactc 357  Q
    |||||||||| ||||  |||||| | ||| ||||||| ||||||  ||  |  |||||||||||||||||    |||||| |||||||||| ||||| ||    
T  16415 attgatagatgagaatccaattagagttggtgttcttagtacatgaaagaagaaaggaaaagatagaagat---taagtcctaagactaagtcattagtc 16511  T
Q  358 gactagagagtaccaaagggagagaggagagacttca 394  Q
     |||||||| || ||||||||||||| || |||||||    
T  16512 tactagagaatatcaaagggagagagtagtgacttca 16548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 11389 - 11320
Alignment:
Q  108 ttgggttgagaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattg 180  Q
    |||||||| |||||||| ||||||||||||| ||| || ||| ||||||||||||||||| |||| |||||||    
T  11389 ttgggttgggaaacatt-gtaaacaccttgg-tgagtgtaaatcattgagtgtcttgttc-ttggtgagattg 11320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 80502 - 80435
Alignment:
Q  117 gaaacatttgtaaacaccttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaa 185  Q
    |||||| |||| ||||||||||| || |||||| ||| |||||||||||||||||  ||||||| ||||    
T  80502 gaaacaattgtgaacaccttgggagagtgaaaatcat-gagtgtcttgttcattgctgagattgggaaa 80435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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