View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17293_high_15 (Length: 230)
Name: NF17293_high_15
Description: NF17293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17293_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 18878043 - 18877852
Alignment:
| Q |
1 |
gtggttttagccctggtcctatgactcttctctctaacttatttgctgatggtggtgatgacgacaagtctttctctcagcttctcgccggtgccatggt |
100 |
Q |
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| T |
18878043 |
gtggttttagccctggtcctatgactcttctctctaacttatttgctgatagtg---atgacggcaagtctttctctcagcttctcgccggttccatggt |
18877947 |
T |
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| Q |
101 |
gtctccggcaccggtaaccaccggggggcttgattcatctggcttctttccacatcctcaggtgaaaattcttttttatgtatatagcttatgct |
195 |
Q |
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||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18877946 |
gtctccggcaccgctaaccgccggggggcttgattcatctggcttcttttcacatcctcaggtgaaaattcttttttatgtatatagcttatgct |
18877852 |
T |
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