View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17296_high_6 (Length: 255)
Name: NF17296_high_6
Description: NF17296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17296_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 7176404 - 7176641
Alignment:
| Q |
1 |
gtggggatgatgaaggagaatgatgtgtttgaatttgagaacttgagggcttatcaaaaagaggaacaagaagtgttgtaaagggataaattgtagattg |
100 |
Q |
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| T |
7176404 |
gtggggatgatgaaggagaatgatgtgtttgaatttgagaacttgagggcttatcaaaaagaggaacaagaagtgttgtaaagggataaattgtagattg |
7176503 |
T |
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| Q |
101 |
tgttaaagaaagtgtattagcttcaagagtggttctaaagttaacaccaaatttatcactaatgaatgaaacagaatcaccccaatctaccaaataactc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
7176504 |
tgttaaagaaagtgtattagcttcaagagtggttctaaagttaacaccaaatttatcactaatgaatgaaacagaatcaccccaatcaaccaaataactc |
7176603 |
T |
|
| Q |
201 |
aaaagatactttatgtttttctgagtttgattctttgt |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
7176604 |
aaaagatactttatgtttttctgagtttgattctttgt |
7176641 |
T |
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