View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17296_low_7 (Length: 246)

Name: NF17296_low_7
Description: NF17296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17296_low_7
NF17296_low_7
[»] chr4 (62 HSPs)
chr4 (20-135)||(45569045-45569160)
chr4 (23-95)||(40018265-40018337)
chr4 (20-86)||(47147504-47147570)
chr4 (20-92)||(7681989-7682061)
chr4 (33-95)||(21879229-21879292)
chr4 (24-82)||(10209171-10209229)
chr4 (19-93)||(30853473-30853547)
chr4 (24-82)||(31961355-31961413)
chr4 (22-95)||(38903794-38903866)
chr4 (28-95)||(934507-934574)
chr4 (20-79)||(35690402-35690461)
chr4 (24-83)||(50680875-50680934)
chr4 (24-82)||(31897517-31897575)
chr4 (25-79)||(33225925-33225979)
chr4 (24-82)||(46372159-46372217)
chr4 (22-92)||(54470340-54470410)
chr4 (22-95)||(18966738-18966811)
chr4 (38-91)||(20047584-20047637)
chr4 (19-92)||(42293344-42293417)
chr4 (20-80)||(8459126-8459186)
chr4 (20-80)||(20999131-20999191)
chr4 (21-81)||(26356751-26356811)
chr4 (23-83)||(28351693-28351753)
chr4 (38-86)||(37042749-37042797)
chr4 (28-92)||(42639099-42639163)
chr4 (20-92)||(55809069-55809141)
chr4 (40-95)||(7544599-7544654)
chr4 (22-65)||(8599047-8599090)
chr4 (33-88)||(26024933-26024988)
chr4 (24-67)||(37488226-37488269)
chr4 (44-95)||(40136700-40136751)
chr4 (20-95)||(40268340-40268413)
chr4 (20-83)||(45204927-45204990)
chr4 (20-59)||(49987539-49987578)
chr4 (38-92)||(6843764-6843818)
chr4 (20-86)||(31403119-31403185)
chr4 (23-85)||(49738636-49738698)
chr4 (29-94)||(21214663-21214728)
chr4 (43-88)||(26025002-26025047)
chr4 (46-95)||(32339716-32339765)
chr4 (20-65)||(44719470-44719515)
chr4 (27-92)||(50662526-50662591)
chr4 (44-92)||(22420796-22420843)
chr4 (24-82)||(35555739-35555794)
chr4 (22-94)||(43069895-43069967)
chr4 (20-83)||(31043203-31043266)
chr4 (22-81)||(44667335-44667394)
chr4 (22-81)||(44686660-44686719)
chr4 (19-70)||(44860963-44861014)
chr4 (33-92)||(47372795-47372854)
chr4 (25-83)||(2589208-2589266)
chr4 (21-59)||(21107124-21107162)
chr4 (20-86)||(25967346-25967412)
chr4 (32-82)||(50967117-50967166)
chr4 (20-82)||(53540421-53540483)
chr4 (47-92)||(25574982-25575027)
chr4 (42-83)||(29182605-29182646)
chr4 (43-92)||(33710078-33710127)
chr4 (30-95)||(40654203-40654268)
chr4 (22-95)||(44641883-44641955)
chr4 (207-236)||(45568953-45568982)
chr4 (20-92)||(2557751-2557823)
[»] chr3 (46 HSPs)
chr3 (23-95)||(43308696-43308768)
chr3 (19-94)||(21427661-21427734)
chr3 (19-95)||(40982026-40982102)
chr3 (21-95)||(46367463-46367538)
chr3 (28-91)||(46431759-46431822)
chr3 (26-81)||(36820067-36820122)
chr3 (20-83)||(39600769-39600832)
chr3 (22-105)||(44443271-44443353)
chr3 (18-92)||(55244406-55244481)
chr3 (22-80)||(11581577-11581635)
chr3 (21-82)||(26990345-26990406)
chr3 (19-83)||(19676169-19676233)
chr3 (20-92)||(20262410-20262482)
chr3 (20-92)||(21200679-21200751)
chr3 (23-95)||(41452816-41452888)
chr3 (23-78)||(2340810-2340865)
chr3 (20-95)||(34719156-34719231)
chr3 (19-82)||(40116557-40116620)
chr3 (20-82)||(33755431-33755493)
chr3 (25-95)||(37598246-37598315)
chr3 (20-83)||(29475819-29475880)
chr3 (32-80)||(48657419-48657467)
chr3 (20-83)||(19162675-19162738)
chr3 (21-92)||(37351539-37351610)
chr3 (20-83)||(50960725-50960788)
chr3 (21-75)||(7278591-7278645)
chr3 (20-82)||(27893220-27893282)
chr3 (19-83)||(2198968-2199032)
chr3 (38-86)||(33700332-33700380)
chr3 (20-83)||(30294209-30294272)
chr3 (20-59)||(31261054-31261093)
chr3 (23-82)||(34844662-34844721)
chr3 (20-83)||(45289179-45289242)
chr3 (20-82)||(54128509-54128572)
chr3 (20-59)||(54365087-54365126)
chr3 (20-82)||(23534659-23534721)
chr3 (26-95)||(29375070-29375139)
chr3 (46-83)||(36304123-36304160)
chr3 (23-96)||(37228062-37228135)
chr3 (23-96)||(37228216-37228289)
chr3 (32-77)||(44133938-44133983)
chr3 (39-92)||(49841766-49841819)
chr3 (19-91)||(659655-659727)
chr3 (23-59)||(45486964-45487000)
chr3 (26-86)||(45493777-45493837)
chr3 (31-95)||(50101906-50101970)
[»] chr8 (49 HSPs)
chr8 (20-95)||(38178336-38178411)
chr8 (25-95)||(24739924-24739994)
chr8 (20-89)||(4011214-4011283)
chr8 (20-92)||(35643685-35643757)
chr8 (20-95)||(10079983-10080058)
chr8 (19-92)||(16705877-16705950)
chr8 (20-85)||(23023356-23023421)
chr8 (27-91)||(39967579-39967643)
chr8 (20-94)||(16994521-16994595)
chr8 (23-92)||(10108947-10109016)
chr8 (20-92)||(79158-79230)
chr8 (20-83)||(2216419-2216481)
chr8 (25-92)||(11733883-11733950)
chr8 (29-92)||(24399868-24399931)
chr8 (20-86)||(39388913-39388980)
chr8 (22-80)||(16351511-16351569)
chr8 (20-92)||(38391972-38392044)
chr8 (47-95)||(39760510-39760558)
chr8 (20-84)||(43733338-43733402)
chr8 (24-95)||(2776338-2776409)
chr8 (20-83)||(5908777-5908840)
chr8 (20-83)||(28169523-28169586)
chr8 (20-83)||(30783130-30783193)
chr8 (24-82)||(7531733-7531791)
chr8 (29-83)||(7615679-7615733)
chr8 (25-95)||(9969204-9969274)
chr8 (20-82)||(17491743-17491805)
chr8 (38-95)||(3645235-3645292)
chr8 (22-83)||(28269767-28269827)
chr8 (21-82)||(32043722-32043783)
chr8 (40-95)||(44175262-44175318)
chr8 (20-95)||(23492166-23492240)
chr8 (24-83)||(30198354-30198413)
chr8 (33-92)||(36069746-36069805)
chr8 (20-59)||(45419366-45419405)
chr8 (20-59)||(45512607-45512646)
chr8 (22-76)||(9070121-9070175)
chr8 (28-95)||(12611640-12611703)
chr8 (22-92)||(16917316-16917386)
chr8 (19-84)||(3079691-3079755)
chr8 (22-83)||(9904970-9905031)
chr8 (23-92)||(27037769-27037838)
chr8 (20-53)||(29709828-29709861)
chr8 (22-83)||(30559826-30559887)
chr8 (22-83)||(37077884-37077945)
chr8 (27-59)||(5127382-5127414)
chr8 (24-92)||(16035806-16035874)
chr8 (27-83)||(29520787-29520843)
chr8 (48-92)||(38483048-38483092)
[»] chr5 (40 HSPs)
chr5 (20-95)||(9917526-9917601)
chr5 (24-82)||(15369886-15369944)
chr5 (21-82)||(2713076-2713137)
chr5 (19-92)||(38684610-38684683)
chr5 (20-92)||(12576939-12577011)
chr5 (20-92)||(14749438-14749510)
chr5 (20-92)||(30588578-30588650)
chr5 (40-95)||(28186851-28186906)
chr5 (22-84)||(2066130-2066192)
chr5 (20-85)||(27998572-27998637)
chr5 (27-92)||(7359339-7359404)
chr5 (21-82)||(33667567-33667628)
chr5 (23-92)||(42199527-42199596)
chr5 (27-83)||(14667909-14667965)
chr5 (20-92)||(18698925-18698997)
chr5 (20-83)||(28013-28076)
chr5 (20-83)||(7678609-7678672)
chr5 (23-82)||(10082834-10082893)
chr5 (22-76)||(3775162-3775216)
chr5 (20-70)||(29922415-29922465)
chr5 (40-94)||(43475390-43475444)
chr5 (20-81)||(6889124-6889185)
chr5 (20-92)||(9235180-9235250)
chr5 (46-95)||(28005692-28005741)
chr5 (21-82)||(31636009-31636070)
chr5 (20-81)||(32759707-32759768)
chr5 (20-95)||(4460339-4460413)
chr5 (20-59)||(6859512-6859551)
chr5 (20-83)||(11675660-11675723)
chr5 (20-59)||(15489604-15489643)
chr5 (23-82)||(42199420-42199479)
chr5 (24-82)||(1525779-1525837)
chr5 (22-80)||(3775256-3775314)
chr5 (24-82)||(11002510-11002568)
chr5 (26-92)||(15168908-15168974)
chr5 (38-67)||(18351013-18351042)
chr5 (22-83)||(33157919-33157980)
chr5 (46-91)||(39322146-39322191)
chr5 (22-58)||(1001295-1001331)
chr5 (27-91)||(5303582-5303646)
[»] chr7 (43 HSPs)
chr7 (20-92)||(12966147-12966219)
chr7 (20-83)||(45601607-45601670)
chr7 (22-95)||(29653622-29653695)
chr7 (20-83)||(28628021-28628084)
chr7 (23-92)||(30144909-30144978)
chr7 (27-83)||(1569154-1569210)
chr7 (23-91)||(28858179-28858247)
chr7 (22-82)||(38135302-38135362)
chr7 (20-79)||(44401217-44401276)
chr7 (24-94)||(9797783-9797853)
chr7 (38-92)||(24549767-24549821)
chr7 (20-70)||(30814772-30814822)
chr7 (21-70)||(14593892-14593941)
chr7 (21-70)||(16013415-16013464)
chr7 (22-83)||(21517468-21517529)
chr7 (23-83)||(30664702-30664762)
chr7 (20-80)||(40830333-40830393)
chr7 (20-83)||(9210792-9210855)
chr7 (20-83)||(28562454-28562517)
chr7 (20-83)||(40980016-40980079)
chr7 (20-79)||(42177110-42177169)
chr7 (20-83)||(42187573-42187635)
chr7 (29-83)||(36239884-36239938)
chr7 (32-86)||(41461242-41461296)
chr7 (41-95)||(41483639-41483693)
chr7 (42-95)||(19262534-19262587)
chr7 (22-83)||(37976368-37976429)
chr7 (40-93)||(40139026-40139079)
chr7 (20-91)||(42103601-42103674)
chr7 (20-92)||(22174131-22174203)
chr7 (24-84)||(46973727-46973787)
chr7 (20-67)||(35713829-35713876)
chr7 (20-83)||(43281962-43282025)
chr7 (20-83)||(43491439-43491502)
chr7 (41-95)||(30914578-30914632)
chr7 (24-82)||(34745882-34745940)
chr7 (42-95)||(9191928-9191981)
chr7 (20-89)||(29012420-29012489)
chr7 (20-53)||(36136895-36136928)
chr7 (46-95)||(41578199-41578248)
chr7 (20-56)||(43282540-43282576)
chr7 (20-60)||(45841089-45841129)
chr7 (22-82)||(47796241-47796301)
[»] chr2 (43 HSPs)
chr2 (19-95)||(18188882-18188958)
chr2 (20-92)||(19235063-19235135)
chr2 (23-96)||(12026080-12026153)
chr2 (23-92)||(26784419-26784488)
chr2 (20-92)||(33287552-33287624)
chr2 (32-95)||(41779186-41779249)
chr2 (20-94)||(43832229-43832303)
chr2 (19-92)||(9556448-9556521)
chr2 (24-95)||(8197617-8197689)
chr2 (24-95)||(8202377-8202449)
chr2 (20-92)||(37452305-37452377)
chr2 (24-83)||(38435087-38435146)
chr2 (38-84)||(2906080-2906126)
chr2 (20-82)||(26670899-26670961)
chr2 (22-84)||(37481704-37481766)
chr2 (24-82)||(42543370-42543428)
chr2 (24-82)||(44437810-44437868)
chr2 (38-95)||(1626344-1626401)
chr2 (21-70)||(6230365-6230414)
chr2 (38-82)||(23915782-23915826)
chr2 (26-70)||(33504360-33504404)
chr2 (20-92)||(37470212-37470284)
chr2 (24-95)||(42092652-42092723)
chr2 (24-82)||(12489891-12489949)
chr2 (38-95)||(15836088-15836146)
chr2 (20-86)||(19855593-19855659)
chr2 (22-80)||(38860311-38860369)
chr2 (38-92)||(42149739-42149793)
chr2 (39-84)||(19024328-19024373)
chr2 (20-52)||(4481619-4481651)
chr2 (26-82)||(5759084-5759140)
chr2 (20-80)||(7431980-7432040)
chr2 (46-94)||(31254445-31254493)
chr2 (38-84)||(11006856-11006902)
chr2 (20-86)||(29548722-29548788)
chr2 (44-82)||(33625287-33625325)
chr2 (20-82)||(43752036-43752098)
chr2 (29-82)||(33594362-33594415)
chr2 (40-81)||(45640615-45640656)
chr2 (26-82)||(4598651-4598707)
chr2 (40-92)||(12443135-12443187)
chr2 (23-83)||(21834688-21834748)
chr2 (40-92)||(28960290-28960342)
[»] chr6 (17 HSPs)
chr6 (20-95)||(1681597-1681672)
chr6 (20-92)||(34584-34656)
chr6 (20-92)||(33997623-33997695)
chr6 (20-95)||(1747717-1747792)
chr6 (20-83)||(9593796-9593859)
chr6 (29-92)||(35199701-35199764)
chr6 (26-82)||(38900-38956)
chr6 (26-82)||(10617323-10617379)
chr6 (27-83)||(31831947-31832003)
chr6 (33-91)||(1748025-1748083)
chr6 (22-83)||(31818664-31818725)
chr6 (20-92)||(6293471-6293543)
chr6 (22-82)||(8364689-8364749)
chr6 (20-92)||(24665942-24666014)
chr6 (21-83)||(43140-43203)
chr6 (21-82)||(7513478-7513539)
chr6 (20-76)||(7080471-7080527)
[»] chr1 (54 HSPs)
chr1 (20-91)||(8342961-8343032)
chr1 (20-95)||(12231496-12231571)
chr1 (20-95)||(15577549-15577624)
chr1 (20-91)||(30834057-30834128)
chr1 (22-95)||(8203210-8203283)
chr1 (20-85)||(44008710-44008775)
chr1 (20-92)||(3818935-3819007)
chr1 (20-92)||(6025736-6025808)
chr1 (22-82)||(19969301-19969361)
chr1 (28-92)||(21251752-21251816)
chr1 (20-92)||(42501239-42501311)
chr1 (20-92)||(43423850-43423922)
chr1 (21-92)||(17815611-17815682)
chr1 (22-105)||(46388509-46388591)
chr1 (22-105)||(46394953-46395035)
chr1 (22-92)||(38869015-38869085)
chr1 (22-92)||(40416504-40416574)
chr1 (43-86)||(12135861-12135904)
chr1 (29-95)||(6299469-6299535)
chr1 (21-82)||(28528487-28528548)
chr1 (20-95)||(853861-853936)
chr1 (24-79)||(26016572-26016627)
chr1 (20-83)||(29577230-29577293)
chr1 (20-79)||(32404618-32404677)
chr1 (21-67)||(10272390-10272436)
chr1 (22-84)||(18469169-18469231)
chr1 (46-91)||(37591151-37591197)
chr1 (29-83)||(39515956-39516010)
chr1 (21-82)||(7083022-7083083)
chr1 (46-95)||(10584973-10585022)
chr1 (22-83)||(41560362-41560423)
chr1 (21-82)||(50771645-50771706)
chr1 (20-92)||(8796340-8796412)
chr1 (20-92)||(9599473-9599545)
chr1 (21-57)||(51584876-51584912)
chr1 (20-84)||(52442615-52442679)
chr1 (32-95)||(16822096-16822159)
chr1 (19-54)||(34827221-34827256)
chr1 (42-93)||(39525910-39525961)
chr1 (20-83)||(52561677-52561740)
chr1 (20-82)||(8676954-8677016)
chr1 (38-80)||(39422018-39422060)
chr1 (20-70)||(48431507-48431557)
chr1 (46-92)||(13827659-13827707)
chr1 (20-81)||(26299216-26299277)
chr1 (21-82)||(27637720-27637781)
chr1 (21-82)||(37263463-37263523)
chr1 (32-92)||(7124284-7124344)
chr1 (20-68)||(8628161-8628209)
chr1 (39-91)||(10569151-10569203)
chr1 (27-83)||(12930399-12930455)
chr1 (39-95)||(30396805-30396861)
chr1 (20-84)||(33560945-33561009)
chr1 (23-82)||(43898363-43898425)
[»] scaffold0018 (1 HSPs)
scaffold0018 (23-82)||(178509-178568)
[»] scaffold0015 (1 HSPs)
scaffold0015 (20-85)||(66668-66733)
[»] scaffold0325 (1 HSPs)
scaffold0325 (22-96)||(11930-12003)
[»] scaffold0373 (1 HSPs)
scaffold0373 (38-92)||(2380-2434)
[»] scaffold0050 (1 HSPs)
scaffold0050 (20-82)||(58315-58377)
[»] scaffold0570 (1 HSPs)
scaffold0570 (20-83)||(1036-1099)
[»] scaffold0279 (1 HSPs)
scaffold0279 (30-84)||(17680-17734)
[»] scaffold0003 (1 HSPs)
scaffold0003 (23-95)||(346849-346921)


Alignment Details
Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 45569160 - 45569045
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgataatagaacatttatgcttcgtttga 119  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45569160 aggaagacctagaaacattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgataatagaacatttatgcttcgtttga 45569061  T
Q  120 accaaaatgggataag 135  Q
    ||||||||||||||||    
T  45569060 accaaaatgggataag 45569045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 40018337 - 40018265
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||| |||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  40018337 aagacttagaaaaactataagaaaaactgttaagaaagatctagagatcaatgagttggatagggatatgata 40018265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 47147504 - 47147570
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    ||||||||||||||||| ||||  |||||||||||||||| |||||||||| |||||||||||||||    
T  47147504 aggaagacctagaaaaactatagaagaaactattaagaaagatctagagattaatgagttggataga 47147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 7682061 - 7681989
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||||| |||||| |||||    
T  7682061 aggaagacctggaaaaactataagagaaactatcaagaaaaatctatagattaatgagttagatagaaatatg 7681989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 21879292 - 21879229
Alignment:
Q  33 aaaattataagagaaactatt-aagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  21879292 aaaactataagagaaactattcaagaaagatctagagatgaatgagttggatagagatatgata 21879229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 10209171 - 10209229
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||    
T  10209171 agacctagaaaaactataagagaaactattaagaaggatctagagattaatgagttgga 10209229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 30853473 - 30853547
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatga 93  Q
    |||| |||| |||||||| ||||||||||||||||| |||||||||| |||| ||||||||| |||||| |||||    
T  30853473 aagggagacttagaaaaactataagagaaactattatgaaaaatctaaagattaatgagttgcatagaggtatga 30853547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 31961413 - 31961355
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||    
T  31961413 agacctagaaaaactataagagaaactattaggaaagatctagagataaatgagttgga 31961355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 38903866 - 38903794
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||| | ||||||||||||||||||||| | ||| |||| |||||||| |||||||||||||||    
T  38903866 gaagacctagaaaact-ataagagaaactattaagaaagacctaaagattaatgagtttgatagagatatgata 38903794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 934574 - 934507
Alignment:
Q  28 ctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||| ||| ||||||||||||||||||  ||||||||| |||||||||||||| | |||||||    
T  934574 ctagaaaaactattagagaaactattaagaaagttctagagattaatgagttggatagggttatgata 934507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 35690402 - 35690461
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagtt 79  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||||| | ||||||||    
T  35690402 aggaagacctagaaaaactataagagaaactattacgaaaaatttagaggttaatgagtt 35690461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 50680875 - 50680934
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||| ||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  50680875 agacctagaaaaactataagagaaattatttagaaagatctagagattaatgagttggat 50680934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 31897575 - 31897517
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||||| |||||||||||    
T  31897575 agacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 31897517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 33225979 - 33225925
Alignment:
Q  25 gacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagtt 79  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| || |||||    
T  33225979 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 33225925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 46372159 - 46372217
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||||| |||||||||||    
T  46372159 agacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 46372217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 54470340 - 54470410
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||| ||||||| |||||||||| ||||||| |||  ||||||||| ||||||||||||||| |||||    
T  54470340 gaagaccaagaaaaactataagagaatctattaataaagttctagagattaatgagttggatagaaatatg 54470410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 18966738 - 18966811
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||| || || |||||||||||||||||||||| ||||| |||| | |||| ||||| |||||||||||    
T  18966738 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagctggattgagatatgata 18966811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 20047584 - 20047637
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    ||||||||||||||||||  || |||||||||| ||||||||||||||||||||    
T  20047584 tataagagaaactattaaagaagatctagagattaatgagttggatagagatat 20047637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 42293417 - 42293344
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||| || ||| ||||| |||||||||||||||||||||| ||||||| || |||||||| |||||| |||||    
T  42293417 aaggatgaactaaaaaaactataagagaaactattaagaaagatctagaaattaatgagttagatagacatatg 42293344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 8459186 - 8459126
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    ||||||||||| ||||| || |||| ||||||||||||||||||||||||| || ||||||    
T  8459186 aggaagacctaaaaaaactaaaagataaactattaagaaaaatctagagattaaagagttg 8459126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 20999131 - 20999191
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    ||||||||||||||||| ||||| | |||||||||||||| |||||||| | |||||||||    
T  20999131 aggaagacctagaaaaactataatataaactattaagaaagatctagagtttaatgagttg 20999191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 26356751 - 26356811
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgg 81  Q
    |||||||||||||||| ||||||||||||| ||| |||  |||||||||| ||||||||||    
T  26356751 ggaagacctagaaaaactataagagaaactgttatgaaggatctagagattaatgagttgg 26356811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 28351693 - 28351753
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||||| ||||||||||||||||| |||| || ||||||| | ||||||||||    
T  28351693 aagacctagaaaaactataagagaaactattacgaaagatttagagattattgagttggat 28351753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 37042797 - 37042749
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||    
T  37042797 tataagagaaactattaagaaagatctagagattattgagttggataga 37042749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 42639163 - 42639099
Alignment:
Q  28 ctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||| |  ||||||||||||||||||| |||||| ||| ||||||||||||||| |||||    
T  42639163 ctagaaaaactgcaagagaaactattaagaaagatctagcgattaatgagttggatagaaatatg 42639099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 55809141 - 55809069
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| ||||||||||||| ||| |||| || ||||| | ||||||||||||  |||||||    
T  55809141 aggaagacctagaaaaactataagagaaactgttaggaaagatttagaggttaatgagttggatccagatatg 55809069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 7544654 - 7544599
Alignment:
Q  40 taagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||||||||| |||||||||| |||||||| ||| || ||||||||    
T  7544654 taagagaaactattaagaaagatctagagattaatgagtttgatcgaaatatgata 7544599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 8599090 - 8599047
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatcta 65  Q
    ||||||||||||||| |||||||||||||||||||||| |||||    
T  8599090 gaagacctagaaaaactataagagaaactattaagaaagatcta 8599047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 26024988 - 26024933
Alignment:
Q  33 aaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagaga 88  Q
    |||| |||| ||||||||||||||||| |||||||||| |||||||||||| ||||    
T  26024988 aaaactatatgagaaactattaagaaagatctagagattaatgagttggatcgaga 26024933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 37488226 - 37488269
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctaga 67  Q
    ||||||||||||| |||||||||||||||||||||| |||||||    
T  37488226 agacctagaaaaactataagagaaactattaagaaagatctaga 37488269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 40136751 - 40136700
Alignment:
Q  44 agaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||||||||||||| || ||| |||||||||| |||||||||    
T  40136751 agaaactattaagaaaaatctagaaattaataagttggatagggatatgata 40136700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 40268413 - 40268340
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| |  ||| |||| ||||||||||||    
T  40268413 aggaaggcctagaaaact-ataagagaaactattaagaaaaatctagagat-acagagctggacagagatatgata 40268340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45204990 - 45204927
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||| ||||||||||||||||| |||| || ||||| | ||| ||||||||    
T  45204990 aggaagacctagaaaaactataagagaaactattaggaaagatttagagtttaataagttggat 45204927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 49987539 - 49987578
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaa 59  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  49987539 aggaagacctagaaaaactataagagaaactattaagaaa 49987578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 6843764 - 6843818
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |||||| |||||    
T  6843764 tataagagagactattaagaaagatctagagattaatgagtttgatagaaatatg 6843818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 31403185 - 31403119
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    ||||||| ||||| ||| ||||||| ||||||||| |||| |||||||||| ||| |||||||||||    
T  31403185 aggaagatctagagaaactataagaaaaactattatgaaagatctagagattaattagttggataga 31403119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 49738698 - 49738636
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatag 85  Q
    |||||||||||||| ||||| | |||||||||||||  ||||||| || ||||||||||||||    
T  49738698 aagacctagaaaaactataataaaaactattaagaaggatctagaaattaatgagttggatag 49738636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 21214728 - 21214663
Alignment:
Q  29 tagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgat 94  Q
    |||||||| ||||||||||||||||||||||  |||| |||  ||||||||||| ||| |||||||    
T  21214728 tagaaaaactataagagaaactattaagaaaggtctatagagtaatgagttggagagaaatatgat 21214663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 26025047 - 26025002
Alignment:
Q  43 gagaaactattaagaaaaatctagagatcaatgagttggatagaga 88  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||    
T  26025047 gagaaactattaagaaagatctagagattaatgagttggatcgaga 26025002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 32339716 - 32339765
Alignment:
Q  46 aaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||| | |||||||| || |||||||||||||||||||||    
T  32339716 aaactattaagaaatacctagagattaacgagttggatagagatatgata 32339765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 44719515 - 44719470
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatcta 65  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||    
T  44719515 aggaagacctagaaaaaatataaaagaaactattaagaaagatcta 44719470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 50662526 - 50662591
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||||||||| |||| | ||| |||||||||| |||||||| ||| || |||||    
T  50662526 cctagaaaaattataagagaaattatttaaaaagatctagagattaatgagtttgatcgaaatatg 50662591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 22420843 - 22420796
Alignment:
Q  44 agaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  22420843 agaaactat-aagaaagatctagagattaatgagttggatagagatatg 22420796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 35555794 - 35555739
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| |||||||||||||||||||   | ||||||||| |||||||||||    
T  35555794 agacctagaaaaactataagagaaactattaag---agtctagagataaatgagttgga 35555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 43069967 - 43069895
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgat 94  Q
    |||||| || ||||| ||| | |||||||||| ||||| |||||||| | ||| |||||||||||||||||||    
T  43069967 gaagacttacaaaaactatgaaagaaactattgagaaagatctagagtttaataagttggatagagatatgat 43069895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 31043203 - 31043266
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||| ||| ||| || |||||||||||||| |||| || ||||||| ||||||||||||    
T  31043203 aggaagacccagataaactaaaagagaaactattaggaaagatttagagattaatgagttggat 31043266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 44667394 - 44667335
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgg 81  Q
    |||||||| |||||| ||||  ||||||||| ||||||||||||||||| || |||||||    
T  44667394 gaagacctcgaaaaactatattagaaactatcaagaaaaatctagagattaacgagttgg 44667335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 44686719 - 44686660
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgg 81  Q
    |||||||| |||||| ||||  ||||||||| ||||||||||||||||| || |||||||    
T  44686719 gaagacctcgaaaaactatattagaaactatcaagaaaaatctagagattaacgagttgg 44686660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 44860963 - 44861014
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagat 70  Q
    ||||||||||| |||||| |||||| |||||||||| |||| ||||||||||    
T  44860963 aaggaagaccttgaaaaactataagggaaactattatgaaagatctagagat 44861014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 47372795 - 47372854
Alignment:
Q  33 aaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||| |||||||||||||| ||| ||| ||| |||||| ||||||||||||||| |||||    
T  47372795 aaaactataagagaaactactaataaagatccagagattaatgagttggatagaaatatg 47372854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 2589208 - 2589266
Alignment:
Q  25 gacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||  |||||||||||||| ||||   |||||||||| ||||||||||||    
T  2589208 gacctagaaaaagcataagagaaactatcaagatggatctagagattaatgagttggat 2589266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 21107124 - 21107162
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaa 59  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  21107124 ggaagacctagaaaaactataagagaaactattaggaaa 21107162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 25967412 - 25967346
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    |||||||| | ||| || |||||||||||||||||| ||| |||||||||| || || |||||||||    
T  25967412 aggaagactttgaataactataagagaaactattaaaaaagatctagagattaacgaattggataga 25967346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 50967166 - 50967117
Alignment:
Q  32 aaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||| || ||||||||||||||||||| | ||||||||||||||||||||    
T  50967166 aaaaactacaagagaaactattaagaaaga-ctagagatcaatgagttgga 50967117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 53540421 - 53540483
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||||||| ||||||| ||||||||| |||| |  | ||||| |||||||||||    
T  53540421 aggaagacctagaaaaactataagataaactattaggaaagacttggagattaatgagttgga 53540483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 25574982 - 25575027
Alignment:
Q  47 aactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||| |||||||||| |||||||||||| || |||||    
T  25574982 aactattaagaaagatctagagattaatgagttggatcgaaatatg 25575027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 29182605 - 29182646
Alignment:
Q  42 agagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||||||||  |||||||||| ||||||||||||    
T  29182605 agagaaactattaagaagtatctagagattaatgagttggat 29182646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 33710078 - 33710127
Alignment:
Q  43 gagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||   |||||||||| ||||||||||||||| |||||    
T  33710078 gagaaactattaagactgatctagagattaatgagttggatagaaatatg 33710127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 40654268 - 40654203
Alignment:
Q  30 agaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||| ||||||||| |||||| || || |||| |||||||| |||| | ||||||||    
T  40654268 agaaaaattataaaagaaactatcaagaaagatgtaaagattaatgagttagatataaatatgata 40654203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 44641955 - 44641883
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||| | |||||| ||||  |||||| || |||||||||||||| || ||||||||||||| ||||||||||    
T  44641955 gaagacttcgaaaaactatattagaaacaatcaagaaaaatctagacattaatgagttggata-agatatgata 44641883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Complemental strand, 45568982 - 45568953
Alignment:
Q  207 tcatgtacatgtttatacttcaaaattcat 236  Q
    ||||||||||||||||||||||||||||||    
T  45568982 tcatgtacatgtttatacttcaaaattcat 45568953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 2557823 - 2557751
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||| ||||||||| | |||||||||||||||||||  ||||  |||| || ||||||||| || |||||    
T  2557823 aggaagatctagaaaaactgtaagagaaactattaagaaggatctgaagattaacgagttggatcgaaatatg 2557751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 43308696 - 43308768
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  43308696 aagacctagaaaaactacaagagaaactattaagaaaaatctagagattaatcagttggatagagatatgata 43308768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 21427734 - 21427661
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgat 94  Q
    |||||||||| |||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||| ||||    
T  21427734 aaggaagaccaagaaaaattataagagaaactattaagaaagacctagagat--atgagttggatagagatttgat 21427661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 40982026 - 40982102
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||| || |||| |||||||||| ||||||||    
T  40982026 aaggaagacctagaaaaactataagagtaactattaagaaagatctagatattaatgtgttggatagatatatgata 40982102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 46367538 - 46367463
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactatt-aagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||| |||||||||||||||||||||| || |||||||||||||| |||||||||||||  |||||||||    
T  46367538 ggaagacctaaaaaaattataagagaaactattaaaaaaaaatctagagatgaatgagttggataaggatatgata 46367463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 46431822 - 46431759
Alignment:
Q  28 ctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    ||||||||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  46431822 ctagaaaaactataagagaaactattaaaaaagatctagagattaatgagttggatagagatat 46431759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 36820122 - 36820067
Alignment:
Q  26 acctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgg 81  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  36820122 acctagaaaaactataagagaaactattaagaaagatctagagattaatgagttgg 36820067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 39600832 - 39600769
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||| |||||||||||||||||||||| || ||||| | ||||||||||||    
T  39600832 aggaagacctagaaaaactataagagaaactattaagaaagatttagaggttaatgagttggat 39600769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 44443353 - 44443271
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgataatagaacatt 105  Q
    |||| |||||||||| ||||||||||||| |||||||  ||||||||||  ||||||||||||| |||||||| ||||||||||    
T  44443353 gaaggcctagaaaaactataagagaaacttttaagaatgatctagagattgatgagttggatagggatatgat-atagaacatt 44443271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 55244406 - 55244481
Alignment:
Q  18 caaggaagacctagaaaaattat-aagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||||| | | |||||||| | ||||||||||||||||||| ||||||||||||||| |||||    
T  55244406 caaggaagacctagaaaaactcttaagagaaattcttaagaaaaatctagagattaatgagttggatagaaatatg 55244481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 11581577 - 11581635
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  11581577 gaagacctagaaaaactataagagaaactattaagaaagatctatagataaatgagttg 11581635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 26990345 - 26990406
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||||| ||| ||||||||||| |||||  ||||||||||||||||||||||    
T  26990345 ggaagacctagaaaaactattagagaaactatcaagaaggatctagagatcaatgagttgga 26990406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 19676233 - 19676169
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||||||||| | ||||||||||||||| ||||||| ||||| | ||||||||||||    
T  19676233 aaggaagacctagaaaaactgtaagagaaactattaggaaaaatttagaggttaatgagttggat 19676169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 20262482 - 20262410
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||| | ||||| ||||||| || |||| |||||| ||||||||||||||||||||| ||||||||||    
T  20262482 aggaagaccaataaaaactataagataatctatcaagaaagatctagagatcaatgagttgggtagagatatg 20262410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 21200679 - 21200751
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| ||| ||| |||||||| ||||| ||||||| || ||||||||||||||| |||||    
T  21200679 aggaagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttggatagaaatatg 21200751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 41452888 - 41452816
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||| |||||||| ||||||  |||||||||||||| |||||||||| ||||||||||||| | ||||||||    
T  41452888 aagacatagaaaaactataagttaaactattaagaaagatctagagattaatgagttggataaatatatgata 41452816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 2340865 - 2340810
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagt 78  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||    
T  2340865 aagacctaggaaaactataagagaaactattaagaaagatctagagattaatgagt 2340810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 34719231 - 34719156
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||||||| ||||| ||||||||||| || ||||||||| || ||||| |||||| |||||| ||||    
T  34719231 aggaagacctagaaaaactataaaagaaactattaggacaaatctagaaattaatgatttggattgagatacgata 34719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 40116620 - 40116557
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||||||| ||||||||||||||||| || | || ||||||| |||||||||||    
T  40116620 aaggaagacctagaaaaactataagagaaactattaggatagatttagagattaatgagttgga 40116557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 33755493 - 33755431
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||  ||||||| |||||||||||    
T  33755493 aggaaaacctagaaaaactataagagaaactattaggaaaaacttagagattaatgagttgga 33755431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 37598315 - 37598246
Alignment:
Q  25 gacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||| | |||||||||||||||||| | |||||||||| |||||||||||||| | |||||||    
T  37598315 gacctagaaaaact-taagagaaactattaagatatatctagagattaatgagttggataggggtatgata 37598246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 29475819 - 29475880
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||  |||||||  ||||||||||||| |||||||||| ||||||||||||    
T  29475819 aggaagacctagaaaagctataaga--aactattaagaaagatctagagattaatgagttggat 29475880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 48657467 - 48657419
Alignment:
Q  32 aaaaattataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  48657467 aaaaattataagaaaaactattaagaaaaatctatagattaatgagttg 48657419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 19162738 - 19162675
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||| |||  ||||||||||||||||| |||| || ||||||| ||||||||||||    
T  19162738 aggaagacctaggaaatctataagagaaactattaggaaagatttagagattaatgagttggat 19162675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 37351539 - 37351610
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||| ||| |||||||| || |||||| |||||||||| |||||| |||| | |||||||    
T  37351539 ggaagacctagaaaaactattagagaaacaatcaagaaagatctagagattaatgagatggagaaagatatg 37351610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 50960788 - 50960725
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||| | ||||||||||||||| ||||  | ||||||| ||||||||||||    
T  50960788 aggaagacctagaaaaaatttaagagaaactattaggaaaggtttagagattaatgagttggat 50960725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 7278591 - 7278645
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatg 75  Q
    |||| ||||||||||| ||||||||||||| ||| |||| |||||||||||||||    
T  7278591 ggaaaacctagaaaaactataagagaaactgttacgaaagatctagagatcaatg 7278645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 27893220 - 27893282
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||||| | |||||||||||||||||| ||  | |||||||| |||||||||||    
T  27893220 aggaagacctagaaagactataagagaaactattaaaaaggacctagagattaatgagttgga 27893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 2198968 - 2199032
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||| ||||||||||||| ||||||| |||||||||  | ||||| || ||||||||||||    
T  2198968 aaggaagatctagaaaaattattagagaaattattaagaacgacctagatattaatgagttggat 2199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 33700332 - 33700380
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    |||||||||| ||||||||||| |||||||||| |||||||| ||||||    
T  33700332 tataagagaagctattaagaaatatctagagattaatgagttagataga 33700380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 30294272 - 30294209
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||||| || ||||||| |||||||||| ||| || || || ||||||||||||||    
T  30294272 aggaagacctagaagaactataagataaactattaaaaaagatttataggtcaatgagttggat 30294209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 31261093 - 31261054
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaa 59  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  31261093 aggaagacctagaaaaactataagagaaactatcaagaaa 31261054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 34844721 - 34844662
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||| ||||||||||||||||| ||||||  | ||||| |||||| ||||    
T  34844721 aagacctagaaaaactataagagaaactattaggaaaaacttggagattaatgaggtgga 34844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45289242 - 45289179
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||| |||  |||| ||||||||||||||||| |||| || ||||||| ||||||||||||    
T  45289242 aggaagatctatgaaaactataagagaaactattaggaaagatttagagattaatgagttggat 45289179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 54128509 - 54128572
Alignment:
Q  20 aggaagacctagaaaaattat-aagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||||||| ||| |||||||||||| | |||| || ||||| |||||||||||||    
T  54128509 aggaagacctagaaaaactattaagagaaactataaggaaagatttagaggtcaatgagttgga 54128572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 54365126 - 54365087
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaa 59  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  54365126 aggaagacctagaaaaactataagagaaactattaggaaa 54365087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 23534721 - 23534659
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||| | ||||||||||| ||||||||||| |||| |  ||||||| |||||||||||    
T  23534721 aggaagacccaaaaaaattataacagaaactattaggaaagacttagagattaatgagttgga 23534659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 29375070 - 29375139
Alignment:
Q  26 acctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||| | | |||||||||||||| ||||| || ||||||| ||| |||||| |||| ||||||||    
T  29375070 acctagaaagactttaagagaaactattgagaaatatgtagagattaattagttgggtagaaatatgata 29375139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 36304123 - 36304160
Alignment:
Q  46 aaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  36304123 aaactattaagaaagatctagagattaatgagttggat 36304160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 37228062 - 37228135
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgataa 96  Q
    |||||||| |||||  ||||| ||||||||||||||| |  |||| || |||||||| |||| |||||||||||    
T  37228062 aagacctataaaaacgataagggaaactattaagaaagacttagaaattaatgagttagataaagatatgataa 37228135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 37228216 - 37228289
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgataa 96  Q
    |||||||| |||||  ||||| ||||||||||||||| |  |||| || || |||||||||| |||||||||||    
T  37228216 aagacctataaaaacgataagggaaactattaagaaagacttagaaattaacgagttggataaagatatgataa 37228289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 44133983 - 44133938
Alignment:
Q  32 aaaaattataagagaaactattaagaaaaatctagagatcaatgag 77  Q
    |||||||||||||||||||||||||| | ||||| |||| ||||||    
T  44133983 aaaaattataagagaaactattaagatagatctaaagattaatgag 44133938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 49841766 - 49841819
Alignment:
Q  39 ataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| ||| ||||| |||| |||||||||||| || |||||    
T  49841766 ataagagaaactattaacaaagatctaaagattaatgagttggatcgaaatatg 49841819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 659655 - 659727
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    |||||||||||||||||| | |||||||||| || ||||   || || |||| |||||||||||||| |||||    
T  659655 aaggaagacctagaaaaactgtaagagaaaccatcaagatgtatttacagattaatgagttggatagggatat 659727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 45487000 - 45486964
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaa 59  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  45487000 aagacctagaaaaactataagagaaactattatgaaa 45486964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 45493837 - 45493777
Alignment:
Q  26 acctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    ||||||| ||| ||||| |||||||||||||||| ||| |||| | |||||| ||||||||    
T  45493837 acctagataaactataaaagaaactattaagaaagatccagaggttaatgagctggataga 45493777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 50101906 - 50101970
Alignment:
Q  31 gaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||| |||||  ||||| ||||||||| || | ||||  ||||||||||||||||||||||||    
T  50101906 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgata 50101970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 38178411 - 38178336
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||||||| |||||||||||||||||| ||| | ||||| || ||||||||||||||||||||||||    
T  38178411 aggaagacctagaaaaactataagagaaactattaacaaagacctagacattaatgagttggatagagatatgata 38178336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 24739994 - 24739924
Alignment:
Q  25 gacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||| ||||||||||||||||||||    
T  24739994 gacctagaaaaattataagagaaactattgagaaagatgtagagattaatcagttggatagagatatgata 24739924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 4011214 - 4011283
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagat 89  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||||| ||||    
T  4011214 aggaagacctagaaaaactataagagaaactattaagaaagatctaaagattaatgagttggataaagat 4011283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 35643757 - 35643685
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||| || |||||    
T  35643757 aggaagacctagaaaaactataagagaaattattaagaaagatctagagattaatgagttggatcgaaatatg 35643685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 10080058 - 10079983
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||| ||| ||||||| ||||| |||||||| |||||||||| ||||||||||||||| ||||||||    
T  10080058 aggaagacctagagaaactataagaaaaactgttaagaaagatctagagattaatgagttggatagaaatatgata 10079983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 16705877 - 16705950
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||| ||| ||| |||||||||||||||||||||| |||||||| |||||||||||| || |||||    
T  16705877 aaggaagacctaaaaatattgtaagagaaactattaagaaaaagctagagattaatgagttggatcgaaatatg 16705950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 23023356 - 23023421
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatag 85  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||| |||| ||||||||||||||    
T  23023356 aggaagacctagaaaaactataagagaaactactaagaaagatctacagattaatgagttggatag 23023421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 39967643 - 39967579
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    |||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||| |||||||    
T  39967643 cctagaaaaactataagagaaactattaagaaagatctagcgattaatgagttggattgagatat 39967579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 16994595 - 16994521
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgat 94  Q
    ||||||||||||||||| |||| ||||||||||||||||  || ||||||| | |||||||||| ||||||||||    
T  16994595 aggaagacctagaaaaactatatgagaaactattaagaatgatttagagattattgagttggattgagatatgat 16994521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 10108947 - 10109016
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||| || ||||| ||||||||||||    
T  10108947 aagacctagaaaaaccataagagaaactaataagaaagatctagagattaacgagtttgatagagatatg 10109016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 79158 - 79230
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||| | |||||| | |||||||||||||||||||||| |||||||||| |||||| |||||||| |||||    
T  79158 aggaaggcttagaaacactataagagaaactattaagaaagatctagagattaatgagctggatagaaatatg 79230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 2216419 - 2216481
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||||||||  |||||||||||||||||| || || ||||||||||||||||||||    
T  2216419 aggaagacctagaaaaaacataagagaaactattaag-aagatttagagatcaatgagttggat 2216481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 11733883 - 11733950
Alignment:
Q  25 gacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||| | || |||||||||||| ||||||||||||||||| |||||||| |||||| |||||    
T  11733883 gacctagaaatactacaagagaaactataaagaaaaatctagagattaatgagttagatagaaatatg 11733950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 24399931 - 24399868
Alignment:
Q  29 tagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||||||||||||||||  |||| ||||| |||||||||||| || |||||    
T  24399931 tagaaaaattataagagaaactattaagaaggatctcgagattaatgagttggattgaaatatg 24399868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 39388913 - 39388980
Alignment:
Q  20 aggaagacctagaaaaattataa-gagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    |||| |||||||||||| ||||| |||||||||||| |||| |||||||||| |||||||||||||||    
T  39388913 aggaggacctagaaaaactataaagagaaactattaggaaagatctagagattaatgagttggataga 39388980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 16351511 - 16351569
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    ||||||||||||||| ||| |||||||||||||||||  |||||||||| |||||||||    
T  16351511 gaagacctagaaaaactattagagaaactattaagaaggatctagagattaatgagttg 16351569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 38392044 - 38391972
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| |||| ||||||| ||||||||| ||||| |||| ||||||| |||| || |||||    
T  38392044 aggaagacctagaaaaactatatgagaaaccattaagaaagatctacagattaatgagtgggatcgaaatatg 38391972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 39760558 - 39760510
Alignment:
Q  47 aactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  39760558 aactattaagaaaactctagagattaataagttggatagagatatgata 39760510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 43733338 - 43733402
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    ||||||||||||||||| || ||||||||||||  ||||  |||||||||| |||||||||||||    
T  43733338 aggaagacctagaaaaactacaagagaaactatcgagaaggatctagagattaatgagttggata 43733402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 2776409 - 2776338
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||| |||| ||||||| |||| ||||||||  ||||||| || ||||| ||||||||||||||||||    
T  2776409 agacctaggaaaactataagaaaaacgattaagaacgatctagatattaatgatttggatagagatatgata 2776338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 5908777 - 5908840
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||| |  ||| ||||||||||||    
T  5908777 aggaagacctagaaaaactataagagaaactattaaaaaagatccaaggattaatgagttggat 5908840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 28169523 - 28169586
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||| ||||| ||||||||||||||||| |||| || | ||||| ||||||||||||    
T  28169523 aggaagacctaaaaaaactataagagaaactattaggaaagattttgagattaatgagttggat 28169586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 30783193 - 30783130
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||| |||| ||||  ||||||||||||||| ||||| |||||||||| ||||||||||||    
T  30783193 aggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttggat 30783130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 7531791 - 7531733
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| |||| |||||||||||| |||  |||||||||| |||||||||||    
T  7531791 agacctagaaaaactatacgagaaactattaggaaggatctagagataaatgagttgga 7531733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 7615733 - 7615679
Alignment:
Q  29 tagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||||||||||| ||||||||||||| || | || ||||||||||||    
T  7615733 tagaaaaattataagagaaaatattaagaaaaatttaaaaattaatgagttggat 7615679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 9969274 - 9969204
Alignment:
Q  25 gacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||| | || |||||| |||||| | ||| ||||||||||||||||||| ||||| |||||||||    
T  9969274 gacctagaaacactacaagagatactattgaaaaagatctagagatcaatgagtttgatagggatatgata 9969204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 17491805 - 17491743
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||||||| | |||||||||||||||||||| |  | ||||| |||||||||||    
T  17491805 aggaagacctagaaaaactgtaagagaaactattaagaaagacttggagattaatgagttgga 17491743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 3645235 - 3645292
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||| |||||||| | |||||||| ||||||| |||| |||||||||||    
T  3645235 tataagagaaactgttaagaaagacctagagattaatgagtaggatggagatatgata 3645292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 28269827 - 28269767
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||||||||||||||||||||||| || || || ||||| | ||||||||||||    
T  28269827 gaagacctagaaaaattataagagaaactatt-agcaagatttagaggttaatgagttggat 28269767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 32043722 - 32043783
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||| ||||| ||| ||||||||||| |||||  ||||| ||||||||||||||||    
T  32043722 ggaagacctaaaaaaactattagagaaactatcaagaaggatctaaagatcaatgagttgga 32043783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 44175262 - 44175318
Alignment:
Q  40 taagagaaactatt-aagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||| |||||| ||||||||||  ||||||||| |||||||||||||    
T  44175262 taagagaaactatttaagaaagatctagagattgatgagttgggtagagatatgata 44175318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 23492166 - 23492240
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||||| | || |||||||||| | ||||| || ||| ||| ||||||||||||||| ||||||||    
T  23492166 aggaagacctagaaaact-attagagaaactactcagaaagatgtagcgattaatgagttggatagaaatatgata 23492240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 30198413 - 30198354
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||| |||||||| ||||||||||| |||||||||| || | ||||| ||||||||||||    
T  30198413 agacttagaaaaactataagagaaattattaagaaagatattgagattaatgagttggat 30198354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 36069746 - 36069805
Alignment:
Q  33 aaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||| ||||||||||| ||| || ||||||| |||||||||| |||| |||||    
T  36069746 aaaattataagggaaactattaacaaatatttagagattaatgagttgggtagaaatatg 36069805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 45419366 - 45419405
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaa 59  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  45419366 aggaagacctagaaaaactataagagaaactattaggaaa 45419405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 45512646 - 45512607
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaa 59  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  45512646 aggaagacctagaaaaactataagagaaactattaggaaa 45512607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 9070121 - 9070175
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatga 76  Q
    ||||||||||||||| ||||||| ||||||||| || | |||||||||| |||||    
T  9070121 gaagacctagaaaaactataagaaaaactattatgatagatctagagattaatga 9070175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 12611640 - 12611703
Alignment:
Q  28 ctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||| |||||||||||||| ||||    |||||||||| |||||||||| |||| ||||||||    
T  12611640 ctagaaaaactataagagaaactagtaag----atctagagataaatgagttgggtagaaatatgata 12611703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 16917316 - 16917386
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||  |||| | |||||||| ||| || || ||||||| ||||||||||||||| |||||    
T  16917316 gaagacctagaaaagctataggtgaaactatcaaggaagatttagagattaatgagttggatagaaatatg 16917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 3079755 - 3079691
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    |||||||||||||| || | ||||||||||||||||||||| |||| | |||  ||||||||||||    
T  3079755 aaggaagacctagataact-ataagagaaactattaagaaagatctggggattgatgagttggata 3079691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 9905031 - 9904970
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||| || ||||||||||||||| ||| || |||| || ||||| ||||||    
T  9905031 gaagacctagaaaaactacaagagaaactattaataaagatttagaaattaatgatttggat 9904970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 27037769 - 27037838
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||| |||| |||| || ||||||||| |||| || || |||| ||||||||||||||| |||||    
T  27037769 aagacctagtaaaactatacgataaactattaggaaagatataaagattaatgagttggatagaaatatg 27037838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 29709828 - 29709861
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactatt 53  Q
    ||||||||||||||||| ||||||||||||||||    
T  29709828 aggaagacctagaaaaactataagagaaactatt 29709861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 30559826 - 30559887
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||| || ||||| ||||||||||||||| | |||| || ||||||| ||||||||||||    
T  30559826 gaagacttaaaaaaactataagagaaactatcaggaaagatttagagattaatgagttggat 30559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 37077884 - 37077945
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||| ||||||||||||||||| ||||  ||  || ||||| ||||||||||||||    
T  37077884 gaagacctaggaaaattataagagaaaccattagaaaggatttagaggtcaatgagttggat 37077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 5127414 - 5127382
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaa 59  Q
    |||||||||| ||||||||||||||||||||||    
T  5127414 cctagaaaaactataagagaaactattaagaaa 5127382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 16035874 - 16035806
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||| ||| | ||||||||||||| |||||||| |||||||||| | | |||||||| || |||||    
T  16035874 agacctaaaaagactataagagaaactgttaagaaatatctagagattacttagttggatcgaaatatg 16035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 29520787 - 29520843
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||| ||||||||||||| ||| |||  || ||||||| ||||||||||||    
T  29520787 cctagaaaaactataagagaaactgttaggaacgatttagagattaatgagttggat 29520843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 38483092 - 38483048
Alignment:
Q  48 actattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||| ||||| |||||||||| ||||||||||||||| |||||    
T  38483092 actattcagaaagatctagagattaatgagttggatagaaatatg 38483048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 9917601 - 9917526
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||| |||||||||||| ||| |||||||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  9917601 aggatgacctagaaaaactattagagaaactatttagaaagatatagagatcaatgagttggatagagatatgata 9917526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 15369944 - 15369886
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||    
T  15369944 agacctagaaaaagtataagagaaactattaagaaaaatctaaagataaatgagttgga 15369886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 2713076 - 2713137
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||    
T  2713076 ggaagacctagaaaaactataagagaaactattaagaaggatctagagatgaatgagttgga 2713137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 38684610 - 38684683
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||||| || |||||||||| |||||||| |||||||||| ||| ||||||||||| |||||    
T  38684610 aaggaagacctagaaaaactacaagagaaacttttaagaaagatctagagattaattagttggatagaaatatg 38684683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 12577011 - 12576939
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| || |||| |||||||||||||| |||||||||| ||||||||| ||||| |||||    
T  12577011 aggaagacctagaaaaactacaagataaactattaagaaagatctagagattaatgagttgaatagaaatatg 12576939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 14749438 - 14749510
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| ||||||||||||||| |||||  |||||||||| || |||||||||||| |||||    
T  14749438 aggaagacctagaaaaactataagagaaactatcaagaaggatctagagattaacgagttggatagaaatatg 14749510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 30588578 - 30588650
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||||||||| |||||||||||| || |||||    
T  30588578 aggaagacctagaaaaactataagagaaattgttaagaaagatctagagatgaatgagttggatcgaaatatg 30588650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 28186906 - 28186851
Alignment:
Q  40 taagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  28186906 taagagaaactattaagaaagatttagagattaatgagttggatagagatatgata 28186851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 2066130 - 2066192
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    ||||||||||||||||||||| |||||||| ||| ||| |||||||||| |||||||||||||    
T  2066130 gaagacctagaaaaattataaaagaaactactaaaaaagatctagagattaatgagttggata 2066192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 27998572 - 27998637
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatag 85  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||| |||| |||||||| |||||    
T  27998572 aggaagacctagaaaaactataagagaaactactaagaaagatctacagattaatgagttagatag 27998637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 7359404 - 7359339
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||  ||||||||||||||| |||||||||||||||| ||| |||||||| || |||||    
T  7359404 cctagaaaaaccataagagaaactatttagaaaaatctagagattaataagttggatcgaaatatg 7359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 33667567 - 33667628
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||||| ||||||||||  |||||||||  |||||||||| |||||||||||    
T  33667567 ggaagacctagaaaaactataagagaagttattaagaaggatctagagattaatgagttgga 33667628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 42199527 - 42199596
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||| ||| ||| |||||||| ||||| ||||||| || ||||||||||||||| |||||    
T  42199527 aagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttggatagaaatatg 42199596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 14667909 - 14667965
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||| |||||||||| ||| ||||||| |||||||||| ||||||||||||    
T  14667909 cctagaaaaactataagagaagctactaagaaagatctagagattaatgagttggat 14667965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 18698925 - 18698997
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||| ||||||||||| ||||||||||  ||| |||||| |||||||||| | ||||||||||||| |||||    
T  18698925 aggaatacctagaaaaactataagagaatgtatcaagaaagatctagagattagtgagttggatagaaatatg 18698997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 28013 - 28076
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||| ||||||||||||||||| |||| || ||||| | ||| ||||||||    
T  28013 aggaagacctagaaaaactataagagaaactattaggaaagatttagaggttaataagttggat 28076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 7678609 - 7678672
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||| |||| ||||  ||||||||||||||| ||||| |||||||||| ||||||||||||    
T  7678609 aggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttggat 7678672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 10082893 - 10082834
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||| |||||||||||||| ||| ||  |||||||||| |||||||||||    
T  10082893 aagacctagaaaaactataagagaaactagtaacaaggatctagagattaatgagttgga 10082834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 3775216 - 3775162
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatga 76  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||| ||| |||||    
T  3775216 gaagacctagaaaaactataagataaactattaagaaaagtctagggattaatga 3775162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 29922415 - 29922465
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagat 70  Q
    ||||||| ||||||||| |||||||||||||||||||||| || |||||||    
T  29922415 aggaagatctagaaaaactataagagaaactattaagaaagatttagagat 29922465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 43475390 - 43475444
Alignment:
Q  40 taagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgat 94  Q
    |||||||||||||||||||| ||| |||||| |||||||||||| || |||||||    
T  43475390 taagagaaactattaagaaagatccagagattaatgagttggatcgaaatatgat 43475444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 6889124 - 6889185
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgg 81  Q
    |||||| |||||||||| ||||||||||||||||| |||| || ||||||| ||| ||||||    
T  6889124 aggaaggcctagaaaaactataagagaaactattaggaaagatttagagattaattagttgg 6889185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 9235180 - 9235250
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| ||  |||||||||||||||||| || ||||||| |||||| ||||| || |||||    
T  9235180 aggaagacctagaaaaacta--agagaaactattaagaaagatatagagattaatgagctggatcgaaatatg 9235250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 28005692 - 28005741
Alignment:
Q  46 aaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||| |||||||||| |||||||| ||||| |||||||||    
T  28005692 aaactattaagaaagatctagagattaatgagtttgatagggatatgata 28005741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 31636070 - 31636009
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||| ||||||||| ||| ||||||||||| |||||  || |||||||||||||||||||    
T  31636070 ggaagatctagaaaaactattagagaaactatcaagaaggatatagagatcaatgagttgga 31636009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 32759707 - 32759768
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgg 81  Q
    ||||| ||||||||||||||||| |||||||||||||||| || || |||  ||||||||||    
T  32759707 aggaaaacctagaaaaattataaaagaaactattaagaaagatttatagaataatgagttgg 32759768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 4460339 - 4460413
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||| ||||||||||| | ||| ||| |||||||||||| | |||||||| ||||||||||||||| ||| ||||    
T  4460339 aggaaaacctagaaaaact-taaaagagactattaagaaagacctagagattaatgagttggatagaaatacgata 4460413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 6859512 - 6859551
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaa 59  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  6859512 aggaagacctagaaaaactataagagaaactattaggaaa 6859551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 11675660 - 11675723
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||  ||||| ||||||||||||||||| || | || ||||||| ||||||||||||    
T  11675660 aggaagacctgtaaaaactataagagaaactattaggacagatttagagattaatgagttggat 11675723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 15489643 - 15489604
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaa 59  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  15489643 aggaagacctagaaaaacaataagagaaactattaagaaa 15489604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 42199420 - 42199479
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||| ||| ||| |||||||| ||||| ||||||| || |||||||||||    
T  42199420 aagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttgga 42199479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 1525779 - 1525837
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| || |||||||||||||| |||  ||| |||||| |||||||||||    
T  1525779 agacctagaaaaactacaagagaaactattaggaaggatccagagataaatgagttgga 1525837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 3775314 - 3775256
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    ||||||||||||||| |||||||||||||| |||||||   |||| ||| |||||||||    
T  3775314 gaagacctagaaaaactataagagaaactactaagaaaggactagcgattaatgagttg 3775256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 11002568 - 11002510
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| ||||||| |||||||||  ||  |||||||||| |||||||||||    
T  11002568 agacctagaaaaactataagacaaactattagtaacgatctagagataaatgagttgga 11002510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 15168908 - 15168974
Alignment:
Q  26 acctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||| | ||| ||||||||  |||||||    
T  15168908 acctagaaaaactataagagaaactgttaggaaaaatttagaggttaataagttggatccagatatg 15168974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 18351042 - 18351013
Alignment:
Q  38 tataagagaaactattaagaaaaatctaga 67  Q
    ||||||||||||||||||||||||||||||    
T  18351042 tataagagaaactattaagaaaaatctaga 18351013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 33157980 - 33157919
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||  |||||||||||||| ||| ||| || || |||| ||||||||||||    
T  33157980 gaagacctagaaaacctataagagaaactactaaaaaatatttatagattaatgagttggat 33157919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 39322191 - 39322146
Alignment:
Q  46 aaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    |||||||||||||| ||||| |||| ||||||||||||||| ||||    
T  39322191 aaactattaagaaagatctaaagattaatgagttggatagaaatat 39322146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1001331 - 1001295
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaa 58  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  1001331 gaagacctagaaaaactataagtgaaactattaagaa 1001295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 5303582 - 5303646
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    |||||||||| | |||||||||||||| | ||| || ||||| | ||||||||||||||| ||||    
T  5303582 cctagaaaaactgtaagagaaactattgaaaaagatttagagtttaatgagttggatagaaatat 5303646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 12966147 - 12966219
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| |||||||||||||||||||||| || ||||||| ||||| ||||||||| |||||    
T  12966147 aggaagacctagaaaaactataagagaaactattaagaaatatttagagattaatgatttggatagaaatatg 12966219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 45601607 - 45601670
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||| ||||||||||||    
T  45601607 aggaagacctagaaaaactataagagaaaccattaagaaagatctagagattaatgagttggat 45601670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 29653695 - 29653622
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||| ||||||| | |||||||||||||||||||| |||||||||| |||||||| |||||| ||||||||    
T  29653695 gaagaccaagaaaaactgtaagagaaactattaagaaagatctagagattaatgagttagatagaaatatgata 29653622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 28628084 - 28628021
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||| ||||||||||||||||| |||| || ||||||| ||||||||||||    
T  28628084 aggaagacctagaaaaactataagagaaactattaggaaagatttagagattaatgagttggat 28628021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 30144909 - 30144978
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||| ||||| |||  ||||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  30144909 aagacctataaaaactattcgagaaactattaagaaagatctagagattaatgagttggatagggatatg 30144978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 1569154 - 1569210
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||    
T  1569154 cctagaaaaactataagagtaactattaagaaagatctagagattaatgagttggat 1569210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 28858179 - 28858247
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    ||||| |||||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||| ||||    
T  28858179 aagacttagaaaaactataagacaaactattaagaaagatctagagattaataagttggatagaaatat 28858247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 38135362 - 38135302
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||||| |||||||||||||||||| ||| || ||||||| |||||||||||    
T  38135362 gaagacctagaaaaagtataagagaaactattaaaaaagatttagagattaatgagttgga 38135302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 44401276 - 44401217
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagtt 79  Q
    |||| ||||||||||||||||||||||||||||||||||| || ||||||| || |||||    
T  44401276 aggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 44401217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 9797853 - 9797783
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgat 94  Q
    |||||||||| || ||||| |||| ||||||||||||   ||||||| |||||||||||||||||||||||    
T  9797853 agacctagaacaactataaaagaagctattaagaaaaccatagagattaatgagttggatagagatatgat 9797783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 24549821 - 24549767
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| || |||||    
T  24549821 tataagagaaactattaagaaagatctagagattaatgagttggattgaaatatg 24549767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 30814822 - 30814772
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagat 70  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  30814822 aggaagacctagaaacactataagagaaactattaagaaagatctagagat 30814772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 14593892 - 14593941
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagat 70  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  14593892 ggaagacctagaaaaactataagagaaactattaagaagaacctagagat 14593941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 16013415 - 16013464
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagat 70  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  16013415 ggaagacctagaaaaactataagagaaactattaagaagaacctagagat 16013464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 21517529 - 21517468
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||| |||||||||||||||||| ||| || ||||||| ||| ||||||||    
T  21517529 gaagacctagaaaaactataagagaaactattaaaaaatatttagagattaataagttggat 21517468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 30664702 - 30664762
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||| ||||||| | ||||| |||||||||||||||| |||||||||| ||||||||||||    
T  30664702 aagatctagaaagactataaaagaaactattaagaaagatctagagattaatgagttggat 30664762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 40830333 - 40830393
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    ||||||||||||||||  |||||||||||||||||||||  ||||||| || |||||||||    
T  40830333 aggaagacctagaaaatctataagagaaactattaagaaggatctagaaattaatgagttg 40830393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 9210855 - 9210792
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||| |||| ||||||||||||| ||| ||||||| ||||| | ||||||||||||    
T  9210855 aggaagacctaggaaaactataagagaaacttttaggaaaaatttagaggttaatgagttggat 9210792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 28562517 - 28562454
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||| |||||||||||| ||||||||||||||||| |||| || ||||||| || |||||||||    
T  28562517 aggatgacctagaaaaaatataagagaaactattatgaaagatttagagattaacgagttggat 28562454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 40980079 - 40980016
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||| |||| |||||||||||||||||  ||| || ||||| ||||||||||||||    
T  40980079 aggaagacctaggaaaactataagagaaactattagaaaagatttagaggtcaatgagttggat 40980016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 42177169 - 42177110
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagtt 79  Q
    |||||||| |||||||  |||||||||| ||||||||||| |||||||||| ||||||||    
T  42177169 aggaagacgtagaaaacctataagagaatctattaagaaagatctagagataaatgagtt 42177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 42187573 - 42187635
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||| ||||||||||||||||||||||| |||| || ||||||| ||| ||||||||    
T  42187573 aggaagaccta-aaaaattataagagaaactattaggaaatatttagagattaattagttggat 42187635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 36239938 - 36239884
Alignment:
Q  29 tagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||| ||||||||||||||||| ||||||| ||||||| || |||||||||    
T  36239938 tagaaaaactataagagaaactattaggaaaaatttagagattaacgagttggat 36239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 41461242 - 41461296
Alignment:
Q  32 aaaaattataagagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    ||||| |||||||||||||||||| ||| |||||| ||| |||||||||||||||    
T  41461242 aaaaactataagagaaactattaataaagatctagtgattaatgagttggataga 41461296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 41483639 - 41483693
Alignment:
Q  41 aagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||||||||| ||||||| || || |||||||||| ||||||||||    
T  41483639 aagagaaactattaagaaagatctagaaattaacgagttggatatagatatgata 41483693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 19262587 - 19262534
Alignment:
Q  42 agagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||| ||||  |||||||||| |||||||||||||| |||||||||    
T  19262587 agagaaactatttagaagcatctagagattaatgagttggatagggatatgata 19262534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 37976368 - 37976429
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||| |||||| ||||||| || |||| || ||||||| ||||||||||||    
T  37976368 gaagacctagaaaaactataagtgaaactaatatgaaagatttagagattaatgagttggat 37976429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 40139079 - 40139026
Alignment:
Q  40 taagagaaactattaagaaaaatctagagatcaatgagttggatagagatatga 93  Q
    |||||||||||||||||||| |||||||||| |||| ||| |||||| ||||||    
T  40139079 taagagaaactattaagaaagatctagagattaatgcgtttgatagaaatatga 40139026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 42103674 - 42103601
Alignment:
Q  20 aggaagacctagaaaaa-ttat-aagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    ||||||||||||||||| |||| |||||||||| |||||||| ||| |||| | ||||||||||||||| ||||    
T  42103674 aggaagacctagaaaaacttattaagagaaactgttaagaaagatcaagaggttaatgagttggatagaaatat 42103601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 22174131 - 22174203
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||| || |||||||| ||||||||||||||| || ||| |||||||||| ||||| || |||||| |||||    
T  22174131 aggaaaacgtagaaaaactataagagaaactataaacaaagatctagagattaatgaattagatagaaatatg 22174203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 46973727 - 46973787
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    |||||| |||||| | |||||||||||||||| ||| |||||||||| ||||||| |||||    
T  46973727 agaccttgaaaaactgtaagagaaactattaataaacatctagagattaatgagtgggata 46973787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 35713829 - 35713876
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctaga 67  Q
    ||||||||||||||||| ||||| ||||| ||||||||| ||||||||    
T  35713829 aggaagacctagaaaaactataacagaaattattaagaataatctaga 35713876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 43281962 - 43282025
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||| ||||||||||||   |||||||||| |||||| || |||||||||| ||||||||||||    
T  43281962 aggatgacctagaaaaaccgtaagagaaacaattaagtaagatctagagattaatgagttggat 43282025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 43491439 - 43491502
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||| ||||||||||||||||| ||||  || ||| ||||| ||||| ||||||||    
T  43491439 aggaagacctaggaaaattataagagaaaccattagaaagaatttagaggtcaataagttggat 43491502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 30914632 - 30914578
Alignment:
Q  41 aagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||| | |||  |||||||||| |||||||||||||| |||||||||    
T  30914632 aagagaaactatcatgaaggatctagagattaatgagttggatagggatatgata 30914578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 34745882 - 34745940
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||  |||||||||||||||| |||  ||||| |||| |||||||||||    
T  34745882 agacctagaaaaaccataagagaaactattaggaaggatctaaagataaatgagttgga 34745940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 9191928 - 9191981
Alignment:
Q  42 agagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||||||| |||||||||| ||| | || |||||| ||||||||    
T  9191928 agagaaactattaagaaagatctagagattaataaatttgatagaaatatgata 9191981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 29012489 - 29012420
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagat 89  Q
    |||||||||| |||| | |||| |||||| |||||||||||| |||| ||| | |||||| |||||||||    
T  29012489 aggaagacctcgaaatactatatgagaaattattaagaaaaacctagtgattagtgagtttgatagagat 29012420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 36136895 - 36136928
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactatt 53  Q
    ||||||||||||||||| ||||||||||||||||    
T  36136895 aggaagacctagaaaaactataagagaaactatt 36136928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 41578248 - 41578199
Alignment:
Q  46 aaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||| |||||||| || ||||||| | ||||||||||||||||||||||    
T  41578248 aaactgttaagaaacatatagagattagtgagttggatagagatatgata 41578199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 43282540 - 43282576
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaag 56  Q
    |||| |||||||||||| |||||||||||||||||||    
T  43282540 aggatgacctagaaaaactataagagaaactattaag 43282576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 45841129 - 45841089
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaa 60  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  45841129 aggaacacctagaaaaattacgagagaaactattaagaaaa 45841089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 47796301 - 47796241
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||| |||||||||||||||||| |||||| |||| || |||| || ||| |||||||    
T  47796301 gaagaccgagaaaaattataagagaacctattaggaaagatttagaaattaataagttgga 47796241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 18188882 - 18188958
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||| |||| ||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||| ||||||||    
T  18188882 aagggagacttagaaaaattataagagaaactattcagaaagatctagagattaatgagctggatagaaatatgata 18188958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 19235135 - 19235063
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||| ||||| ||||||||| |||||    
T  19235135 aggaagacctagaaaaactataagagaaactattgagaaagatctagagattaatgatttggatagaaatatg 19235063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 12026153 - 12026080
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgataa 96  Q
    |||||||||| ||| |||| ||||||||||||||||| |||||||||| |||||||| |||||| |||||||||    
T  12026153 aagacctagagaaactataggagaaactattaagaaagatctagagattaatgagtttgatagaaatatgataa 12026080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 26784488 - 26784419
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||| |||||||||||||||||||||| || ||||||| ||||||||| ||||| |||||    
T  26784488 aagacctagaaaaactataagagaaactattaagaaagatatagagattaatgagttgaatagaaatatg 26784419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 33287552 - 33287624
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| || |||||||| ||| || |||||    
T  33287552 aggaagacctagaaaaactataagagaaactattaagaaagatctagaaattaatgagttagatcgaaatatg 33287624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 41779249 - 41779186
Alignment:
Q  32 aaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||||||| |||||| ||| |||||||||| ||||||||| ||||||||||||||    
T  41779249 aaaaattataagagaaattattaaaaaagatctagagattaatgagttgaatagagatatgata 41779186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 43832229 - 43832303
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgat 94  Q
    ||||||||||| | ||| |||||||||||||||||||||  |||||||||| |||||||||||||  ||||||||    
T  43832229 aggaagacctaaacaaactataagagaaactattaagaaggatctagagattaatgagttggataaggatatgat 43832303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 9556521 - 9556448
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||| |||||| ||||||| |||||||||||||| |||||| ||| ||||||||||||  |||||||    
T  9556521 aaggaagaccttgaaaaactataagataaactattaagaaagatctagtgattaatgagttggatcaagatatg 9556448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 8197689 - 8197617
Alignment:
Q  24 agacctagaaaaattat-aagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||| ||||| ||| ||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||    
T  8197689 agacctaaaaaaactatgaagagaaactattaagaaagatctaaagattaatgagttggatagaaatatgata 8197617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 8202449 - 8202377
Alignment:
Q  24 agacctagaaaaattat-aagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||| ||||| ||| ||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||    
T  8202449 agacctaaaaaaactatgaagagaaactattaagaaagatctaaagattaatgagttggatagaaatatgata 8202377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 37452377 - 37452305
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||||||||||||| | ||||||||||| |  ||||||| ||||||||||| ||| |||||    
T  37452377 aggaagacctagaaaaattataagaggagctattaagaaagaattagagattaatgagttggacagaaatatg 37452305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 38435087 - 38435146
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||| |||| |||||||    
T  38435087 agacctagaaaaactacaagagaaactattaagaaagatctagagattaatgtgttggat 38435146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 2906126 - 2906080
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  2906126 tataaaagaaactattaagaaaaatgtagagatcaatgagttggata 2906080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 26670899 - 26670961
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||| ||||| ||||| |||||||||||||||| || ||||||| |||||||||||    
T  26670899 aggaagacctacaaaaactataaaagaaactattaagaaagatttagagattaatgagttgga 26670961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 37481766 - 37481704
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    ||||||| ||||||| ||| |||||||||||||||||| |||||| ||| |||||||||||||    
T  37481766 gaagaccaagaaaaactattagagaaactattaagaaagatctagcgataaatgagttggata 37481704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 42543370 - 42543428
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||||| |||||||||||    
T  42543370 agacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 42543428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 44437868 - 44437810
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||||| |||||||||||    
T  44437868 agacctagaaaaactatatgagaaactattaagaaggatctagagataaatgagttgga 44437810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 1626344 - 1626401
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||| | ||||||||    
T  1626344 tataagagaaactattaagaaagatctagagattaatgagttgtataaaaatatgata 1626401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 6230414 - 6230365
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagat 70  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  6230414 ggaagatctagaaaaaatattagagaaactattaagaaaaatctagagat 6230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 23915826 - 23915782
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||    
T  23915826 tataagagaaactattaagaaaaatctagagattaatgaggtgga 23915782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 33504360 - 33504404
Alignment:
Q  26 acctagaaaaattataagagaaactattaagaaaaatctagagat 70  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||    
T  33504360 acctagaaaaactataagagaaactattaagaaagatctagagat 33504404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 37470284 - 37470212
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||  ||||| ||||||||||||||||| || | |||||||||| |||||||||||| || |||||    
T  37470284 aggaagacctgaaaaaactataagagaaactattaggacagatctagagattaatgagttggatcgaaatatg 37470212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 42092652 - 42092723
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||| |||| ||||||||||||| ||| || ||||||| ||| |||||||||| |||| ||||    
T  42092652 agacctagaaaaactataggagaaactattaaaaaagatgtagagattaattagttggatagtgatacgata 42092723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 12489949 - 12489891
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||| |||| |||||||||||| |||  |||||||||| |||||||||||    
T  12489949 agacctagaaaaactatatgagaaactattaggaaggatctagagataaatgagttgga 12489891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 15836088 - 15836146
Alignment:
Q  38 tataagagaaactattaagaaaaa-tctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||| ||||||||| | ||||||| || |||||||||||||||||||||    
T  15836088 tataagagaaactactaagaaaaaatgtagagattaacgagttggatagagatatgata 15836146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 19855593 - 19855659
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||| |||| | |||||| ||||||||    
T  19855593 aggaagacctagataaactataaaagaaactattaagaaagatccagaggttaatgagctggataga 19855659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 38860311 - 38860369
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    |||||| | ||||||| ||||||||||||||||||||| ||||||||||  ||||||||    
T  38860311 gaagacttggaaaaatgataagagaaactattaagaaagatctagagattcatgagttg 38860369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 42149793 - 42149739
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||||||||| |||||||||| | |||| |||||||| |||||    
T  42149793 tataagagaaactattaagaaagatctagagattattgagctggatagaaatatg 42149739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 19024328 - 19024373
Alignment:
Q  39 ataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||||    
T  19024328 ataagagaaactattaagaaagatctaaagattaatgagttggata 19024373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 4481619 - 4481651
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactat 52  Q
    |||||||||||||||||||||||||||||||||    
T  4481619 aggaagacctagaaaaattataagagaaactat 4481651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 5759140 - 5759084
Alignment:
Q  26 acctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||| ||| ||||||||||  |||||  ||||||||||||||||||||||    
T  5759140 acctagaaaaactattagagaaactaccaagaaggatctagagatcaatgagttgga 5759084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 7432040 - 7431980
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    ||||| ||||||||||| |||  ||||||||||||||||  |||||||||| |||||||||    
T  7432040 aggaaaacctagaaaaactattggagaaactattaagaaggatctagagattaatgagttg 7431980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 31254445 - 31254493
Alignment:
Q  46 aaactattaagaaaaatctagagatcaatgagttggatagagatatgat 94  Q
    |||||||||||||| |||||||||| ||||||||| ||||| |||||||    
T  31254445 aaactattaagaaagatctagagattaatgagttgaatagaaatatgat 31254493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 11006856 - 11006902
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||    
T  11006856 tataagagaaactattaagaaagacctagagattaatgggttggata 11006902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 29548788 - 29548722
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    ||||||||||  ||||| ||||||||||| |||||||||| || ||||||| |||| ||| ||||||    
T  29548788 aggaagacctgaaaaaactataagagaaattattaagaaagatttagagattaatgtgtttgataga 29548722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 33625325 - 33625287
Alignment:
Q  44 agaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  33625325 agaaactattaagaaatatctagagattaatgagttgga 33625287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 43752098 - 43752036
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||||||| ||| ||||||||||||| |||| || | || || |||||||||||    
T  43752098 aggaagacctagaaaaactatcagagaaactattaggaaagatttggaaattaatgagttgga 43752036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 33594415 - 33594362
Alignment:
Q  29 tagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||||||||||||||| |||| ||  |||||| ||| |||||||    
T  33594415 tagaaaaattataagagaaactattatgaaagatacagagataaataagttgga 33594362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 45640656 - 45640615
Alignment:
Q  40 taagagaaactattaagaaaaatctagagatcaatgagttgg 81  Q
    |||||||||||||||||||| |||||||||| ||| ||||||    
T  45640656 taagagaaactattaagaaagatctagagattaataagttgg 45640615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 4598707 - 4598651
Alignment:
Q  26 acctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||| |||| ||||| |||||| |||  |||||||||| |||||||||||    
T  4598707 acctagaaaaactatacgagaagctattaggaaggatctagagataaatgagttgga 4598651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 12443135 - 12443187
Alignment:
Q  40 taagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||||| | || ||||||| |||||||||||| || |||||    
T  12443135 taagagaaactattaagatatatttagagattaatgagttggatcgaaatatg 12443187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 21834688 - 21834748
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||| ||||||||| ||||||| ||||||||| |||| || || |||| ||||||||||||    
T  21834688 aagatctagaaaaactataagataaactattaggaaatatttatagattaatgagttggat 21834748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 28960342 - 28960290
Alignment:
Q  40 taagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||| |||||||  |||||||||| ||||||||||| | |||||||    
T  28960342 taagagaaactgttaagaaggatctagagataaatgagttggagaaagatatg 28960290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 1681672 - 1681597
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||| |||| ||||||||||||||||||||||  |||||||||| |||||||||| ||| |||||||||    
T  1681672 aggaagacctaaaaaagttataagagaaactattaagaaggatctagagattaatgagttgggtagggatatgata 1681597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 34656 - 34584
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||| |||| |||||||||||| || |||||    
T  34656 aggaagacctagaaaaactataagagaaaccattaagaaagatctaaagattaatgagttggattgaaatatg 34584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 33997695 - 33997623
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||| | |||| |||||||||||||||||||||||  |||||||| ||||||||||||||| |||||    
T  33997695 aggaagaccttggaaaactataagagaaactattaagaaaagcctagagattaatgagttggatagaaatatg 33997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 1747792 - 1747717
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||||||  ||||||||||||  ||||||  |||||||||| ||||||||||||| ||||||||||    
T  1747792 aggaagacctagaaaaaccataagagaaactggtaagaaggatctagagattaatgagttggataaagatatgata 1747717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 9593859 - 9593796
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||||||||||||||||||||| |||| |  ||||||| ||||||||||||    
T  9593859 aggaagacctagaaaaattataagagaaactattaggaaagacttagagattaatgagttggat 9593796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 35199764 - 35199701
Alignment:
Q  29 tagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||| ||||||||||| |||| |||||||||| |||||||| |||||| |||||    
T  35199764 tagaaaaattataaaagaaactattaggaaagatctagagattaatgagttagatagaaatatg 35199701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 38900 - 38956
Alignment:
Q  26 acctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||| ||||||||||||||||| |||  |||||||||| |||||||||||    
T  38900 acctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 38956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 10617379 - 10617323
Alignment:
Q  26 acctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||| |||||||||||| ||||||||  |||||||||| |||||||||||    
T  10617379 acctagaaaaactataagagaaaccattaagaaggatctagagattaatgagttgga 10617323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 31832003 - 31831947
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||| ||| |||||||||||||||||| |||||||||| | ||||||||||    
T  31832003 cctagaaaaactatcagagaaactattaagaaagatctagagattactgagttggat 31831947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 1748083 - 1748025
Alignment:
Q  33 aaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    |||| ||| |||||||||| |||||||||| ||||||| ||||||||||||||| ||||    
T  1748083 aaaactattagagaaactactaagaaaaatttagagattaatgagttggatagaaatat 1748025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 31818664 - 31818725
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||| ||||||||||||||||| ||||  | | ||||| ||||||||||||    
T  31818664 gaagacctagaaaaactataagagaaactattaggaaaggtttggagattaatgagttggat 31818725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 6293543 - 6293471
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||| ||||||||| || || ||||||||||| |||| ||||||| || |||||||| |||||| |||||    
T  6293543 aggaagatctagaaaaactaaaatagaaactattaggaaatatctagatattaatgagttagatagaaatatg 6293471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 8364689 - 8364749
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||| ||||| |||||||||||||||||||||| || |||| || ||| |||||||    
T  8364689 gaagacctaaaaaaactataagagaaactattaagaaagatttagaaattaataagttgga 8364749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 24665942 - 24666014
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||| | ||||| || || ||||||||||||||||||| || ||||| |||||||||||||| || |||||    
T  24665942 aggaagtcatagaataactacaagagaaactattaagaaatatttagaggtcaatgagttggatcgaaatatg 24666014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 43203 - 43140
Alignment:
Q  21 ggaagacctagaaaaa-ttataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||| || || |||||||||||||||| ||| |||||||||  ||||||||||||    
T  43203 ggaagacctagaacaacttttaagagaaactattaataaagatctagagagtaatgagttggat 43140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 7513539 - 7513478
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||| || ||| ||||||||||||| ||| |||  |||||||||| |||||||||||    
T  7513539 ggaagacctggataaactataagagaaacttttaggaaggatctagagatgaatgagttgga 7513478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 7080471 - 7080527
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatga 76  Q
    ||||| ||||| ||||| ||||||||||||||| |||||| ||||| |||| |||||    
T  7080471 aggaaaacctataaaaactataagagaaactatcaagaaagatctaaagattaatga 7080527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 8343032 - 8342961
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    ||||||||||||||||| |||||||||||| ||||| ||| |||||||||| ||||||||||||||| ||||    
T  8343032 aggaagacctagaaaaactataagagaaacaattaataaagatctagagattaatgagttggatagaaatat 8342961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 12231496 - 12231571
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||| || |||||||| ||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  12231496 aggaatacttagaaaaactataagagagactattaagaaagatctcgagattaatgagttggatagagatatgata 12231571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 15577549 - 15577624
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||| ||| |||||| ||||||||||||||||||||  || ||||||| ||||||||||||||||||||||||    
T  15577549 aggaagatctaaaaaaataataagagaaactattaagaaggatatagagattaatgagttggatagagatatgata 15577624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 30834128 - 30834057
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    ||||||||||||||||  ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||    
T  30834128 aggaagacctagaaaagctataagagaaactattacgaaagatctagagattaatgagttggatagaaatat 30834057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 8203283 - 8203210
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||||| |||||||||||  ||| |||||||    
T  8203283 gaagacctagaaaaactataagagaaactattaaaaaagatctagagattaatgagttggacggaggtatgata 8203210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 44008710 - 44008775
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatag 85  Q
    ||||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||||||||||    
T  44008710 aggaagacctagaaaaaatctaagagaaactatcgagaaagatctagagatcaatgagttggatag 44008775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 3819007 - 3818935
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||| |||||| |||||||||||||||||||||| || ||||||| ||||||||| ||||| |||||    
T  3819007 aggaagaccttgaaaaactataagagaaactattaagaaagatttagagattaatgagttgaatagaaatatg 3818935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 6025736 - 6025808
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| ||||||||| |||| ||| ||| |||||||||| ||||||||||||||| |||||    
T  6025736 aggaagacctagaaaaactataagagatactagtaaaaaagatctagagattaatgagttggatagaaatatg 6025808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 19969361 - 19969301
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||||| |||||||||||    
T  19969361 gaagacctagaaaaactataagagaaactattaacaaagatctagagattaatgagttgga 19969301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 21251752 - 21251816
Alignment:
Q  28 ctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||||||| |||||| |||||    
T  21251752 ctagaaaaattataagagaaaccataaagaaatatctagagatcaatgagtttgatagaaatatg 21251816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 42501239 - 42501311
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||| ||||||||||| ||||||||||| |||||||||| ||||| |||| ||||||||||||||| |||||    
T  42501239 aggaaaacctagaaaaactataagagaaattattaagaaagatctatagattaatgagttggatagaaatatg 42501311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 43423850 - 43423922
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    |||||||||||||||||||| |||||| || ||||||||| |||||||||| | ||||||||||||| |||||    
T  43423850 aggaagacctagaaaaattacaagagagaccattaagaaagatctagagattagtgagttggatagaaatatg 43423922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 17815611 - 17815682
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| |||  ||||||| |||||| |||||    
T  17815611 ggaagacctagaaaaattataagagaaactatttagaaagatctagtgattgatgagttagatagaaatatg 17815682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 46388509 - 46388591
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgataatagaacatt 105  Q
    |||| |||||||||| ||||||||||||| |||||||  ||||||||||  ||||||||||||| |||||||| ||||||||||    
T  46388509 gaaggcctagaaaaactataagagaaacttttaagaatgatctagagattgatgagttggatagggatatgat-atagaacatt 46388591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 46394953 - 46395035
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgataatagaacatt 105  Q
    |||| |||||||||| ||||||||||||| |||||||  ||||||||||  ||||||||||||| |||||||| ||||||||||    
T  46394953 gaaggcctagaaaaactataagagaaacttttaagaatgatctagagattgatgagttggatagggatatgat-atagaacatt 46395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 38869015 - 38869085
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||| ||| |||| |||||||||| |||||    
T  38869015 gaagacctagaaaaactataagagaaattattaagaaagatctagcgattaatgggttggatagatatatg 38869085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 40416504 - 40416574
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||| |||| |||||||||||| || |||||    
T  40416504 gaagacctagaaaaactataagacaaactattaagaaagatctatagattaatgagttggatcgaaatatg 40416574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 12135861 - 12135904
Alignment:
Q  43 gagaaactattaagaaaaatctagagatcaatgagttggataga 86  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  12135861 gagaaactattaagaaaaatctagagattaatgagttggataga 12135904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 6299535 - 6299469
Alignment:
Q  29 tagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||||||||| | |||||||| |||||||||| |||||||| ||||||  |||||||    
T  6299535 tagaaaaattataagagaaattgttaagaaagatctagagattaatgagtttgatagacgtatgata 6299469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 28528487 - 28528548
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||| ||||| ||||| |||||||||||||||  |||||||||| |||||||||||    
T  28528487 ggaagacctaaaaaaactataacagaaactattaagaaggatctagagattaatgagttgga 28528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 853936 - 853861
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||||||||| ||||  |||| ||||||||||||||||  |||||||||| | |||||||||||| || ||||||    
T  853936 aggaagacctaaaaaatctatacgagaaactattaagaaggatctagagattagtgagttggatagggacatgata 853861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 26016572 - 26016627
Alignment:
Q  24 agacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagtt 79  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||||| ||||||||    
T  26016572 agacctagaaaaactataagagaaactattaggaatgatctagagataaatgagtt 26016627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 29577293 - 29577230
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||||| || || | |||||||||||||| |||||||||| |||||| |||||    
T  29577293 aggaagacctagaaaaactacaacataaactattaagaaagatctagagattaatgagctggat 29577230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 32404677 - 32404618
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagtt 79  Q
    ||||||||||| ||||| ||||||||||||||||| |||| || ||||||| ||||||||    
T  32404677 aggaagacctacaaaaactataagagaaactattaggaaagatttagagattaatgagtt 32404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 10272390 - 10272436
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctaga 67  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||    
T  10272390 ggaagacctagaaaacttataagagaaactattaagaaggatctaga 10272436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 18469231 - 18469169
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    |||||| |||||||||||||||||||||| ||| |||| ||  |||| |||||||||||||||    
T  18469231 gaagacttagaaaaattataagagaaacttttaggaaatattaagaggtcaatgagttggata 18469169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 37591151 - 37591197
Alignment:
Q  46 aaactattaagaaaa-atctagagatcaatgagttggatagagatat 91  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37591151 aaactattaagaaaaaatctagagattaatgagttggatagagatat 37591197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 39516010 - 39515956
Alignment:
Q  29 tagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||| |||| ||||||||||||||||||| ||||| || ||||||||||||    
T  39516010 tagaaaaactatacgagaaactattaagaaaaacctagaaattaatgagttggat 39515956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 7083022 - 7083083
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||||  ||||||||||||||||||||   | |||||||| |||||||||||    
T  7083022 ggaagacctagaaaagctataagagaaactattaagatggaactagagattaatgagttgga 7083083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 10585022 - 10584973
Alignment:
Q  46 aaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||||| ||| |||||| ||||||||||| ||||||||||||    
T  10585022 aaactattaagaaagatccagagattaatgagttggacagagatatgata 10584973  T

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Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 41560362 - 41560423
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||||||||||||  ||||||||||||||||| || | || ||||||| ||||||||||||    
T  41560362 gaagacctagaaaagctataagagaaactattaggatacatttagagattaatgagttggat 41560423  T

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Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 50771706 - 50771645
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||||| |||||| ||||||||||||||  | |||||||| ||| |||||||    
T  50771706 ggaagacctagaaaaactataagcgaaactattaagaaggacctagagattaataagttgga 50771645  T

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Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 8796340 - 8796412
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||| | ||||| | |||||||||||||||||||| ||||||| || ||||| |||||| || |||||    
T  8796340 aggaagaccaataaaaactttaagagaaactattaagaaagatctagatattaatgacttggattgaaatatg 8796412  T

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Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 9599545 - 9599473
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||| || |||||||||||||| |||| || ||||| | |||||||| |||  |||||||    
T  9599545 aggaagacctagaaaaactacaagagaaactattaggaaatatttagagtttaatgagtttgatccagatatg 9599473  T

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Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 51584876 - 51584912
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaaga 57  Q
    |||||||||||||||| ||||||||||||||||||||    
T  51584876 ggaagacctagaaaaactataagagaaactattaaga 51584912  T

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Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 52442679 - 52442615
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    |||||||||||||| || ||||||||||||||| |||||  |||||||  | |||||||||||||    
T  52442679 aggaagacctagaacaaatataagagaaactatcaagaaggatctagatgttaatgagttggata 52442615  T

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Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 16822159 - 16822096
Alignment:
Q  32 aaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    ||||| || ||||||||||| ||||||| || ||||||| |||||| ||||||| |||||||||    
T  16822159 aaaaactacaagagaaactagtaagaaagatgtagagattaatgagctggatagcgatatgata 16822096  T

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Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 34827256 - 34827221
Alignment:
Q  19 aaggaagacctagaaaaattataagagaaactatta 54  Q
    |||||||||||||||||| |||||||||||||||||    
T  34827256 aaggaagacctagaaaaactataagagaaactatta 34827221  T

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Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 39525910 - 39525961
Alignment:
Q  42 agagaaactattaagaaaaatctagagatcaatgagttggatagagatatga 93  Q
    |||||||| ||||||||| || ||||||||| |||| |||||||||||||||    
T  39525910 agagaaacaattaagaaatatatagagatcactgagctggatagagatatga 39525961  T

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Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 52561740 - 52561677
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||| |||||||| ||||||||||||| ||| |||| || ||||| | ||||||||||||    
T  52561740 aggaagacttagaaaaactataagagaaactgttaggaaagatttagaggttaatgagttggat 52561677  T

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Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 8677016 - 8676954
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    ||||| |||||| |||  |||||||||||||||||| ||| || ||||||| |||||||||||    
T  8677016 aggaaaacctaggaaatctataagagaaactattaaaaaagatttagagattaatgagttgga 8676954  T

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Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 39422060 - 39422018
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttg 80  Q
    |||||||||||||| ||||||| |||||||||| |||||||||    
T  39422060 tataagagaaactaataagaaagatctagagataaatgagttg 39422018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 48431557 - 48431507
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagat 70  Q
    ||||||||| | ||||| |||||||||||||||||||||| || |||||||    
T  48431557 aggaagacccaaaaaaactataagagaaactattaagaaagatttagagat 48431507  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 13827707 - 13827659
Alignment:
Q  46 aaactattaagaaaaa--tctagagatcaatgagttggatagagatatg 92  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| |||||    
T  13827707 aaactattaagaaaaaagtctagagattaatgagttggatagaaatatg 13827659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 26299216 - 26299277
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgg 81  Q
    ||||| |||||| |||| ||||||||||||||||| |||| || ||||| | ||||||||||    
T  26299216 aggaaaacctaggaaaactataagagaaactattatgaaagatttagaggttaatgagttgg 26299277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 27637781 - 27637720
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||| ||||| | | ||||||||||| |||||  |||||| |||||||||||||||    
T  27637781 ggaagacctaaaaaaacttttagagaaactatcaagaaggatctagtgatcaatgagttgga 27637720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 37263463 - 37263523
Alignment:
Q  21 ggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||| | ||| || |||||||| ||||| | |||||||||||||||||||||    
T  37263463 ggaagacctagaaatactattagtgaaactatcaagaaga-tctagagatcaatgagttgga 37263523  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 7124284 - 7124344
Alignment:
Q  32 aaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||| |||||||||||||||| ||||| |||||  ||| ||||| ||||||||| |||||    
T  7124284 aaaaactataagagaaactattgagaaagatctattgattaatgaattggatagaaatatg 7124344  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 8628161 - 8628209
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagag 68  Q
    ||||||||||||||||| ||||| ||||||||||| |||| || |||||    
T  8628161 aggaagacctagaaaaactataacagaaactattaggaaagatttagag 8628209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 10569203 - 10569151
Alignment:
Q  39 ataagagaaactattaagaaaaatctagagatcaatgagttggatagagatat 91  Q
    |||| |||||||||||||||| |||||||||| ||| || |||||||| ||||    
T  10569203 ataaaagaaactattaagaaagatctagagattaataagctggatagaaatat 10569151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 12930455 - 12930399
Alignment:
Q  27 cctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    ||||| |||||||||||||||| ||||| ||||||| || |||| | ||||||||||    
T  12930455 cctaggaaaattataagagaaattattatgaaaaatttaaagattagtgagttggat 12930399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 30396861 - 30396805
Alignment:
Q  39 ataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||||||||||| |||||||  ||| |||||| |||||||||||||| |||| ||||    
T  30396861 ataagagaaactgttaagaaggatccagagattaatgagttggatagggatacgata 30396805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 33561009 - 33560945
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    |||||| |||||||||| | |||| |||||||||||| || |||||||||| |  ||||||||||    
T  33561009 aggaagtcctagaaaaactgtaagggaaactattaagtaagatctagagattagcgagttggata 33560945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 43898363 - 43898425
Alignment:
Q  23 aagacctagaaaaattataagagaaactatt---aagaaaaatctagagatcaatgagttgga 82  Q
    ||||||| |||||| ||||||||||||||||   |||||  |||||||||| |||||||||||    
T  43898363 aagacctggaaaaactataagagaaactatttagaagaaggatctagagattaatgagttgga 43898425  T

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Target: scaffold0018 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 178568 - 178509
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||    
T  178568 aagacctagaaaaactataagagaaactattaagaaagatatagagattaatgagttgga 178509  T

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Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 66668 - 66733
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatag 85  Q
    ||||||||||||||||||||||| | ||| |||||||||| |||||||||| |||||||| |||||    
T  66668 aggaagacctagaaaaattataaaaaaaattattaagaaagatctagagattaatgagttagatag 66733  T

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Target: scaffold0325 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 11930 - 12003
Alignment:
Q  22 gaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgataa 96  Q
    ||||| ||||||||| |||||||||||||||||||||  |||||||||| |||||| ||||| |||||| |||||    
T  11930 gaagaactagaaaaactataagagaaactattaagaaggatctagagattaatgag-tggattgagatacgataa 12003  T

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Target: scaffold0373 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 2434 - 2380
Alignment:
Q  38 tataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatg 92  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |||||| |||||    
T  2434 tataagagagactattaagaaagatctagagattaatgagtttgatagaaatatg 2380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 58377 - 58315
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttgga 82  Q
    |||||||||||||||||  |||||||||||| ||| ||||||  | |||||||||||||||||    
T  58377 aggaagacctagaaaaacgataagagaaactgttaggaaaaacttggagatcaatgagttgga 58315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 1099 - 1036
Alignment:
Q  20 aggaagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggat 83  Q
    |||||||||||| |||| ||| |||||||| ||||| ||| || ||||| ||||||||||||||    
T  1099 aggaagacctaggaaaactattagagaaaccattaaaaaagatttagaggtcaatgagttggat 1036  T

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Target: scaffold0279 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 17680 - 17734
Alignment:
Q  30 agaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggata 84  Q
    ||||||| |||||||||||||||||| ||| || ||||||| |||| ||||||||    
T  17680 agaaaaaatataagagaaactattaaaaaagatttagagattaatgggttggata 17734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 346921 - 346849
Alignment:
Q  23 aagacctagaaaaattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 95  Q
    |||| ||||||||| || |||| |||||||||| ||| |||||||||| ||| | | ||| ||||||||||||    
T  346921 aagatctagaaaaactacaagataaactattaaaaaagatctagagattaattattcggaaagagatatgata 346849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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