View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17299_high_4 (Length: 248)
Name: NF17299_high_4
Description: NF17299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17299_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 48759025 - 48758788
Alignment:
| Q |
1 |
tcatgcttgaatgtaactgctactttagacgatgctgatgtgtgattaaagtgagatctataaagttgagtgataatcagtaacaattgtttcttatgat |
100 |
Q |
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| T |
48759025 |
tcatgcttgaatgtaactgctactttagacgatgctgatgtgtgattaaagtgagatctataaagttgagtgataatcagtaacaattgtttcttatgat |
48758926 |
T |
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| Q |
101 |
ttggtaattcttgagttgtgattttggctctttggtatttctatggttatgattgattgatggagtaggatattaatgagatgttttatttttacacatg |
200 |
Q |
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| T |
48758925 |
ttggtaattcttgagttgtgattttggctctttggtatttctatggttatgattgattgatggagtaggatattaatgagatgttttatttttacacatg |
48758826 |
T |
|
| Q |
201 |
atcaaaagcttaactctactgcaaaaaattccaatatt |
238 |
Q |
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| T |
48758825 |
atcaaaagcttaactctactgcaaaaaattccaatatt |
48758788 |
T |
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