View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1729_high_22 (Length: 293)
Name: NF1729_high_22
Description: NF1729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1729_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 11284787 - 11284509
Alignment:
| Q |
7 |
aatttttcatccatgtttccaacatttggaggtggtgtcttgtgtgccaaggcatcaatgctgctgcaggtattttcacttagcaaatattttcatcagc |
106 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
11284787 |
aattattcatccatgtttccaacatttggaggtggtgtcttgtgtgccaaggcatcaatgctgctgcaggtattttcacttggcaaatattttcatcagc |
11284688 |
T |
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| Q |
107 |
tatgtcagttagcagttccacctttataatcaacttgttgagaactttctgaatttttgtttatttatcacagaatgttcctcctgctttgcttgttcga |
206 |
Q |
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||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11284687 |
aatgtcagttagcagttccaactttataaccaacttgttgagaactttctgaatgtttgtttatttatcacagaatgttcctcctgctttgcttgttcga |
11284588 |
T |
|
| Q |
207 |
tttttgagggagcatcgatcagaatgggctgattatggcgttgatgcgtactctgctacttgtctcaagtctagcccct |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11284587 |
tttttgagggagcatcgatcagaatgggctgattatggcgttgatgcgtactctgctacttgtctcaagtctagcccct |
11284509 |
T |
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