View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1729_low_35 (Length: 245)
Name: NF1729_low_35
Description: NF1729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1729_low_35 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 30212235 - 30212461
Alignment:
| Q |
1 |
ttttagttaaatagacttctaaaattttttggtcttctctatttnnnnnnngcttagcataaccttgatccgatgtagtctatagacctatgtcggtcga |
100 |
Q |
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| T |
30212235 |
ttttagttaaatagacttctaaaaagttttgatcttctctatttaaaaaaagcttagtataaccttgatccgatgtagtctatagaccaatgtcggtcga |
30212334 |
T |
|
| Q |
101 |
tatggcctattatacacccatatttatcaatatgtgaaaacaattttgttaattttaaaattaccacgtttcttaactttttctaaacaaaaaagaattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
30212335 |
tatggcctattatacacccatatttatcaatatgtgaaaacaattttgttaattttaaaattatcacgtttcttaactttttctaaacaaaaaagaattt |
30212434 |
T |
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| Q |
201 |
ggagttaaagataaaagtactaggtag |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
30212435 |
ggagttaaagataaaagtactaggtag |
30212461 |
T |
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